Hello Gregory,

The Tool Shed has some assembly tools that you would be able to use with a local or cloud instance.

Please see: http://toolshed.g2.bx.psu.edu/

Under Category name: Assembly

Help with the tool shed and local/cloud Galaxy instances is in our wiki:
http://wiki.galaxyproject.org/Tool%20Shed
http://getgalaxy.org
http://usegalaxy.org/cloud

Hopefully this helps to get you started, this is a good mailing list to use for follow-up questions for both the tool shed and local/cloud installs. Start a new thread when you have new questions for the best visibility.

Take care,

Jen
Galaxy team

On 11/20/12 11:53 AM, Thyssen, Gregory - ARS wrote:

Hello

I would like to assemble my Illimuna reads along with some Sanger reads.

Is Velvet or ABySS hidden somewhere in the menu?

Please advise.

Thanks,

Gregory Thyssen, PhD

Molecular Biologist

Cotton Fiber Bioscience

USDA-ARS-Southern Regional Research Center

1100 Robert E Lee Blvd

New Orleans, LA 70124

gregory.thyssen@ars.usda.gov

504-286-4280

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