Traceback (most recent call last): File "script_testBioblend_distant.py", line 6, in giOlivia.tools.run_tool(history_id='729031331e2ffdfc',tool_id='galaxy.web.pasteur.fr/toolshed-pasteur/repos/fmareuil/export_data/export/2.2',tool_inputs=tool_inputs) File "/usr/local/lib/python2.7/dist-packages/bioblend-0.4.2_dev-py2.7.egg/bioblend/galaxy/tools/__init__.py", line 25, in run_tool return Client._post(self, payload) File "/usr/local/lib/python2.7/dist-packages/bioblend-0.4.2_dev-py2.7.egg/bioblend/galaxy/client.py", line 71, in _post r = self.gi.make_post_request(url, payload=payload, files_attached=files_attached) File "/usr/local/lib/python2.7/dist-packages/bioblend-0.4.2_dev-py2.7.egg/bioblend/galaxyclient.py", line 94, in make_post_request r.status_code, body=r.text) # @see self.body for HTTP response body bioblend.galaxy.client.ConnectionError: Unexpected response from galaxy: 500: Internal Server Error

Internal Server Error

Galaxy was unable to successfully complete your request

URL: http://galaxy.web.pasteur.fr/api/tools?key=c23d8cb98671911813305051710d4ae1
Module galaxy.web.framework.middleware.error:149 in __call__
>>  app_iter = self.application(environ, sr_checker)
Module paste.recursive:84 in __call__
>>  return self.application(environ, start_response)
Module galaxy.web.framework.middleware.remoteuser:96 in __call__
>>  return self.app( environ, start_response )
Module paste.httpexceptions:633 in __call__
>>  return self.application(environ, start_response)
Module galaxy.web.framework.base:132 in __call__
>>  return self.handle_request( environ, start_response )
Module galaxy.web.framework.base:190 in handle_request
>>  body = method( trans, **kwargs )
Module galaxy.web.framework:201 in decorator
>>  log.exception( 'Uncaught exception in exposed API method:'+ str(err),exc_info=True)
TypeError: exception() got an unexpected keyword argument 'exc_info'


CGI Variables
CONTENT_LENGTH '192'
CONTENT_TYPE 'application/json'
HTTP_ACCEPT '*/*'
HTTP_ACCEPT_ENCODING 'gzip, deflate, compress'
HTTP_CONNECTION 'Keep-Alive'
HTTP_HOST 'galaxy.web.pasteur.fr'
HTTP_USER_AGENT 'python-requests/2.0.1 CPython/2.7.5+ Linux/3.11.0-15-generic'
HTTP_X_FORWARDED_FOR '87.231.42.131'
HTTP_X_FORWARDED_HOST 'galaxy.web.pasteur.fr'
HTTP_X_FORWARDED_SERVER 'galaxy.web.pasteur.fr'
ORGINAL_HTTP_HOST 'localhost:18085'
ORGINAL_REMOTE_ADDR '127.0.0.1'
PATH_INFO '/api/tools'
QUERY_STRING 'key=c23d8cb98671911813305051710d4ae1'
REMOTE_ADDR '87.231.42.131'
REQUEST_METHOD 'POST'
SERVER_NAME '127.0.0.1'
SERVER_PORT '18085'
SERVER_PROTOCOL 'HTTP/1.1'

WSGI Variables
application <paste.recursive.RecursiveMiddleware object at 0x9814050>
is_api_request True
paste.cookies (<SimpleCookie: >, '')
paste.expected_exceptions [<class 'paste.httpexceptions.HTTPException'>]
paste.httpexceptions <paste.httpexceptions.HTTPExceptionHandler object at 0x97eef90>
paste.httpserver.thread_pool <paste.httpserver.ThreadPool object at 0x9b0c210>
paste.parsed_querystring ([('key', 'c23d8cb98671911813305051710d4ae1')], 'key=c23d8cb98671911813305051710d4ae1')
paste.recursive.forward <paste.recursive.Forwarder from />
paste.recursive.include <paste.recursive.Includer from />
paste.recursive.include_app_iter <paste.recursive.IncluderAppIter from />
paste.recursive.script_name ''
paste.throw_errors True
request_id '50dfed809adc11e3aebd003048f24604'
webob._parsed_query_vars (MultiDict([('key', 'c23d8cb98671911813305051710d4ae1')]), 'key=c23d8cb98671911813305051710d4ae1')
wsgi process 'Multithreaded'


URL: http://galaxy.web.pasteur.fr/api/tools?key=c23d8cb98671911813305051710d4ae1
Module galaxy.web.framework.middleware.error:149 in __call__
>>  app_iter = self.application(environ, sr_checker)
Module paste.recursive:84 in __call__
>>  return self.application(environ, start_response)
Module galaxy.web.framework.middleware.remoteuser:96 in __call__
>>  return self.app( environ, start_response )
Module paste.httpexceptions:633 in __call__
>>  return self.application(environ, start_response)
Module galaxy.web.framework.base:132 in __call__
>>  return self.handle_request( environ, start_response )
Module galaxy.web.framework.base:190 in handle_request
>>  body = method( trans, **kwargs )
Module galaxy.web.framework:201 in decorator
>>  log.exception( 'Uncaught exception in exposed API method:'+ str(err),exc_info=True)
TypeError: exception() got an unexpected keyword argument 'exc_info'

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