Hi, Try using the fastQ Groomer tool instead,, Grooming actually does take a while. There is also a faster parallel version of fastQ groomer on the main tool shed which you can try as well. Cheers, Kevin. On Thu, Oct 4, 2012 at 2:49 AM, Pete Schmitt <Peter.Schmitt@dartmouth.edu>wrote:
When attempting the change the filetype of a fastq file to fastqsanger, the process for changing the type goes on forever. This does not allow any further processing of the data.
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Pete Schmitt Technical Director: Discovery Cluster NH INBRE Grid Computational Genetics Lab Dartmouth College, HB 6223 L24 Berry/Baker Library Hanover, NH 03755
Phone: 603-646-8109 http://discovery.dartmouth.eduhttp://columbia.dartmouth.edu/gridhttp://www.e...
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