David, Thank you for reporting this error, which was due to a new tool shed feature being introduced in -central, which had not yet been wrapped in a backwards compatibility layer for -dist. As of 9440:bbb229927c68, the issue should be resolved. --Dave B. On 4/11/13 12:51:03.000, David Bonsall wrote:
Dear Galaxy team,
I'm trying to install NCBI + tools on a local instance of galaxy (rep: 8.1546099212f), but I get the following error, which I do not get when trying to install other tools.
Thank you for all your hard work. It's all much appreciated
David
app_iter = self.application(environ, detect_start_response) Module paste.recursive:84 in __call__ view return self.application(environ, start_response) Module paste.httpexceptions:633 in __call__ view return self.application(environ, start_response) Module galaxy.web.framework.base:125 in __call__ view return self.handle_request( environ, start_response ) Module galaxy.web.framework.base:182 in handle_request view body = method( trans, **kwargs ) Module galaxy.web.framework:228 in decorator view return func( self, trans, *args, **kwargs ) Module galaxy.webapps.galaxy.controllers.admin_toolshed:894 in
Error Traceback: View as: Interactive | Text | XML (full) ⇝ HTTPError: HTTP Error 500: Internal Server Error URL: http://127.0.0.1:8080/admin_toolshed/prepare_for_install?tool_shed_url=http://toolshed.g2.bx.psu.edu/&repository_ids=1d92ebdf7e8d466c&changeset_revisions=1f546099212f Module weberror.evalexception.middleware:364 in respond view prepare_for_install view
common_install_util.get_dependencies_for_repository( trans, tool_shed_url, repo_info_dict, includes_tool_dependencies ) Module tool_shed.util.common_install_util:90 in get_dependencies_for_repository view required_repo_info_dicts = get_required_repo_info_dicts( tool_shed_url, util.listify( repo_info_dict ) ) Module tool_shed.util.common_install_util:283 in get_required_repo_info_dicts view response = urllib2.urlopen( url ) Module urllib2:126 in urlopen view return _opener.open(url, data, timeout) Module urllib2:400 in open view response = meth(req, response) Module urllib2:513 in http_response view 'http', request, response, code, msg, hdrs) Module urllib2:438 in error view return self._call_chain(*args) Module urllib2:372 in _call_chain view result = func(*args) Module urllib2:521 in http_error_default view raise HTTPError(req.get_full_url(), code, msg, hdrs, fp) HTTPError: HTTP Error 500: Internal Server Error
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