Jorrit, Just to eliminate one possible cause of this behavior, could you confirm that your local Galaxy instance's universe_wsgi.ini file's enable_tool_shed_check setting is uncommented and set to True, and the hours_between_check is also uncommented and set to a value between 1 and 12? --Dave B. On 3/25/13 21:26:07.000, jorrit poelen wrote:
Hey y'all,
I noticed that my local galaxy instance doens't pickup latest updates from test toolshed.
Steps to reproduce:
1. install obotools from test toolshed using hg clone http://jorrit@testtoolshed.g2.bx.psu.edu/repos/jorrit/obotools , revision 45:bb20766df19c
2. hg push new change of obotools of galaxy tool to testtoolshed , creating revision 46:532808477800
3. update obotools in galaxy admin
expected result: galaxy admin detects new version and give an option to update.
actual result: galaxy admin does not detect new version.
I've attached some galaxy logging below. One thing I noticed that the reported commit time in testtoolshed seems 7 hours off - just minutes after I pushed the change, testtoolshed says the change was commit "~ 7 hours ago".
Workaround I am using to do update is to deactivate and remove the tool all together, and re-install straight from test-toolshed. What should I do to make the tool version update work? I am probably missing something.
Thanks!
-jorrit
Galaxy logging on looking for updates in test toolshed: ---
24.130.122.217 - - [26/Mar/2013:01:12:46 +0000] "GET /admin_toolshed/browse_repositories HTTP/1.1" 200 - "http://galaxy:7474/admin" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_5) AppleWebKit/536.28.10 (KHTML, like Gecko) Version/6.0.3 Safari/536.28.10" 24.130.122.217 - - [26/Mar/2013:01:12:51 +0000] "GET /admin_toolshed/browse_repositories?operation=get+updates&id=a799d38679e985db HTTP/1.1" 302 - "http://galaxy:7474/admin_toolshed/browse_repositories" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_5) AppleWebKit/536.28.10 (KHTML, like Gecko) Version/6.0.3 Safari/536.28.10" 24.130.122.217 - - [26/Mar/2013:01:12:51 +0000] "GET /admin_toolshed/check_for_updates?id=a799d38679e985db HTTP/1.1" 302 - "http://galaxy:7474/admin_toolshed/browse_repositories" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_5) AppleWebKit/536.28.10 (KHTML, like Gecko) Version/6.0.3 Safari/536.28.10" 24.130.122.217 - - [26/Mar/2013:01:12:52 +0000] "GET /admin_toolshed/update_to_changeset_revision?tool_shed_url=http://testtoolshed.g2.bx.psu.edu/&name=obotools&owner=jorrit&changeset_revision=bb20766df19c&latest_changeset_revision=bb20766df19c&latest_ctx_rev=45 HTTP/1.1" 302 - "http://galaxy:7474/admin_toolshed/browse_repositories" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_5) AppleWebKit/536.28.10 (KHTML, like Gecko) Version/6.0.3 Safari/536.28.10" 24.130.122.217 - - [26/Mar/2013:01:12:52 +0000] "GET /admin_toolshed/manage_repository?status=done&message=The+installed+repository+named+%27obotools%27+is+current%2C+there+are+no+updates+available.++&id=a799d38679e985db HTTP/1.1" 200 - "http://galaxy:7474/admin_toolshed/browse_repositories" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_5) AppleWebKit/536.28.10 (KHTML, like Gecko) Version/6.0.3 Safari/536.28.10" ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
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