Galaxy was configured with Apache as proxy server. The uploaded file size is very small. The message from paster.log related with it is "POST /False?nginx_redir=/tool_runner/index HTTP/1.1" 200 - "http://galaxy.mcdb.ucla.edu/tool_runner?tool_id=upload1" "Mozilla/5.0 (Macintosh; U; Intel Mac OS X 10_6_2; en-us) AppleWebKit/531.9 (KHTML, like Gecko) Version/4.0.3 Safari/531.9" Weihong --- On Thu, 12/15/11, Luciano Cosme <cosme.simple@gmail.com> wrote: From: Luciano Cosme <cosme.simple@gmail.com> Subject: Re: [galaxy-dev] file upload issue To: "weihong yan" <weihongyan@yahoo.com> Cc: galaxy-dev@lists.bx.psu.edu Date: Thursday, December 15, 2011, 1:09 PM Hi, I am having the same issue today. It was working a few days ago, but now never finish uploading. Luciano On Dec 15, 2011, at 3:05 PM, weihong yan wrote: I recently installed galaxy program on our Linux server and it is going to be used for analyzing high-throuput sequencing data. I tried to upload a dataset (a bed format file) from local computer to galaxy server, but no success. The message of "Dataset is uploading" stays forever. The uploaded dataset was shown on the /galaxy-dist/database/tmp directory, but it didn't get transferred to the job-working directory or files directory before it was deleted by the galaxy. The output of run_functional_tests shows that uploading file went successfully. The paster.log file doesn't show error message about the uploading. Any configuration did I miss? Your feedback is highly appreciated. Thank you! Weihong ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/