Hello James,

Thank you for your answer. I use open authentication and my script now is in a local server. I call this script from user.py (in lib/galaxy/webapps/galaxy/controllers) and return to me the email of a user in other platform. My script is auth.py (in local server, cgi enable to run in a web browser). Since i want to remove this script from my local server, I want to move it under galaxy. I want a way to call this script from user.py not as an external link, but as a function inside galaxy. Is that more precise?

What do you propose?

On 30 January 2013 20:16, James Taylor <james@jamestaylor.org> wrote:

I'm not sure I fully understand the question, so it may help to
clarify. However, while Galaxy is a web application which provides an
HTTP interface, it is not a general web server and cannot serve CGI
scripts. You might be able to this either with a proxy server in front
of Galaxy or by making your script a Galaxy tool, but it depends on
what you mean by "how will I call it inside a script in galaxy?".

--
James Taylor, Assistant Professor, Biology/CS, Emory University

On Sun, Jan 27, 2013 at 2:23 PM, Zinonas Antoniou <z.antoniou@gmail.com> wrote:
> Hello,
>
> Now I have a web page (cgi) in a server like www.example.com/myexample.py
>
> I want to have the myexample.py file under a galaxy folder. Then, how will I
> call it inside a script in galaxy?
>
>
> Thank you in advance,
> Zinon

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