Hi there,
we are running a local instant of galaxy and when running Picard tools Reorder Sam files I get following error message:

"An error occurred with this dataset: ## exit code=1; stdout= Error: Unable to access jarfile /ReorderSam.jar"

Now, I thought that when installing picard-tools via the toolshed the dependency should be added automatically. I am really not sure why it looks for ReorderSam.jar in the top directory /. Any clues?

Best wishes,

Alex

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Alexander Kurze, DPhil
University of Oxford
Department of Biochemistry
South Parks Road
Oxford, OX1 3QU
United Kingdom

Tel: +44 1865 613 230
Fax:+44 1865 613 341