Hi,
This issue is appearing again, after the upgrade of our Galaxy on
October the 23rd....anyone experiencing the same?
Thanks,
Pieter.
From: galaxy-dev-bounces@lists.bx.psu.edu
[mailto:galaxy-dev-bounces@lists.bx.psu.edu] On Behalf Of Lukasse, Pieter
Sent: vrijdag 4 april 2014 10:59
To: Bossers, Alex; Kuijt, Eric
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] Strange issue with datatypes in Galaxy version of last week
Hi Alex, all
FYI – I’ve added the card to
https://trello.com/c/ro8knsaa some time ago. Can you please vote for it?
Thanks,
Pieter.
From: Bossers,
Alex
Sent: dinsdag 25 maart 2014 16:52
To: Lukasse, Pieter
Cc: galaxy-dev@lists.bx.psu.edu
Subject: RE: [galaxy-dev] Strange issue with datatypes in Galaxy version of last week
Pieter,
I just experienced the same with another generic tabular .tab file output. It broke the filename at dash without any extension.
The file itself was ok, just the name.
Alex
Van:
galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu]
Namens Lukasse, Pieter
Verzonden: dinsdag 25 maart 2014 16:33
Aan: galaxy-dev@lists.bx.psu.edu
Onderwerp: [galaxy-dev] Strange issue with datatypes in Galaxy version of last week
Hi,
Apparently a new datatypes bug has been introduced in the Galaxy version of last week:
I have a tool that generates a csv file. Tool configuration is like this:
<outputs>
<data
name="simOut"
format="msclust.csv"
label="${tool.name} on ${on_string} - SIM file"/>
The datatypes has this entry:
<datatype
extension="msclust.csv"
type="galaxy.datatypes.tabular:Tabular"
mimetype="text/csv"
display_in_upload="true"
subclass="true"/>
At first Galaxy output seems fine:
But when I download the file, the downloaded file name will be : Galaxy40-[MsClust_on_data_1_-_SIM_file]-
When I go to “edit attributes” and just click “save”, then upon downloading again, the file name is correct... Galaxy40-[MsClust_on_data_1_-_SIM_file].msclust.csv .
Anyone faced this issue?
Thanks and regards,
Pieter.
Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB,
Wageningen, the Netherlands
+31-317481122; skype: pieter.lukasse.wur