Hi Robert Are you using the built in SQLite database ? Hans-Rudolf On 08/31/2014 01:27 AM, Robert Baertsch wrote:
I submitted 13 fastq files to tophat2 using DRMAA and got this error. Is it fatal? BTW: This is a super cool feature.
I’m running the following version of galaxy-dist.
changeset: 14212:91547729ffde branch: stable tag: tip user: Nate Coraor <nate@bx.psu.edu <mailto:nate@bx.psu.edu>> date: Fri Aug 29 14:00:23 2014 -0400 summary: Update tag latest_2014.08.11 for changeset ea12550fbc34
-Robert
There were errors setting up 2 submitted job(s):
* *Error executing tool: (OperationalError) database is locked u'UPDATE history_dataset_association SET update_time=?, name=?, blurb=? WHERE history_dataset_association.id = ?' ('2014-08-30 23:14:44.683957', 'Tophat2 on data 7: insertions', 'queued', 137)* * *Error executing tool: (OperationalError) database is locked u'UPDATE dataset SET update_time=?, state=? WHERE dataset.id = ?' ('2014-08-30 23:15:57.204718', 'queued', 446)*
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