Re: [galaxy-dev] Galaxy on cloud config issues

9 Aug 2013

      Hello Ravpreet,

It is not working for me either. I posted a detail reply later.

Best Regards,
Anatoly

From: Ravpreet Setia [mailto:Ravpreet.Setia@oicr.on.ca]
Sent: Thursday, August 08, 2013 1:37 PM
To: Dannon Baker; Ulyanov_Anatoly
Cc: galaxy-dev@lists.bx.psu.edu
Subject: RE: [galaxy-dev] Galaxy on cloud config issues

Anatoly, did this method work for you? It is not working for me.
________________________________
From: galaxy-dev-bounces@lists.bx.psu.edu [galaxy-dev-bounces@lists.bx.psu.edu] on behalf of Dannon Baker [dannon.baker@gmail.com]
Sent: Wednesday, August 07, 2013 8:00 PM
To: Ulyanov_Anatoly
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] Galaxy on cloud config issues
A new tools volume will be released shortly.  For now, you can launch the previous cloudman release using the following:

https://main.g2.bx.psu.edu/cloudlaunch?ami=ami-da58aab3&bucket_default=gxy-workshop

On Wed, Aug 7, 2013 at 7:42 PM, Ulyanov_Anatoly <Ulyanov_Anatoly@allergan.com<mailto:Ulyanov_Anatoly@allergan.com>> wrote:
Hello,

Does anybody use the last Galaxy image? I am running Galaxy image on EC2:

Instance ID         i-1b2d3773
Image ID (AMI) ami-118bfc78

It looks as those three tools have configuration problems:

EBOSS
Blast+
meme

For all three I am getting a message that looks  like that:

/mnt/galaxy/tmp/job_working_directory/000/2/galaxy_2.sh: blastp: not found
Error invoking command: blastp

Is there a way to fix configuration files for those tools?

Thank you.

Best Regards,
Anatoly

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