#!/bin/bash # Author: James Casbon, 2009 ### BEGIN INIT INFO # Provides: galaxy # Required-Start: $network $local_fs $mysql # Required-Stop: # Default-Start: 2 3 4 5 # Default-Stop: 0 1 6 # Short-Description: Galaxy ### END INIT INFO . /lib/lsb/init-functions USER="galaxy" GROUP="nogroup" GALAXY_DIR="/home/galaxy/galaxy/" # Galaxy releases >= 16.01 installs dependencies by default into a virtualenv in /.venv # A simple way to activate this virtualenv is to use the python interpreter in /.venv # See https://wiki.galaxyproject.org/News/2016_01_GalaxyRelease and # https://github.com/galaxyproject/galaxy/blob/dev/doc/source/admin/framework_dependencies.rst PYTHON="/home/galaxy/galaxy/.venv/bin/python" OPTS="./scripts/paster.py serve --log-file /home/galaxy/galaxy.log config/galaxy.ini" PIDFILE="/var/run/galaxy.pid" case "${1:-''}" in 'start') log_daemon_msg "Starting Galaxy" if start-stop-daemon --chuid $USER --group $GROUP --start --make-pidfile \ --pidfile $PIDFILE --background --chdir $GALAXY_DIR --exec $PYTHON -- $OPTS; then log_end_msg 0 else log_end_msg 1 fi ;; 'stop') log_daemon_msg "Stopping Galaxy" if start-stop-daemon --stop --pidfile $PIDFILE; then log_end_msg 0 else log_end_msg 1 fi ;; 'restart') # restart commands here $0 stop $0 start ;; *) # no parameter specified echo "Usage: $SELF start|stop|restart|reload|force-reload|status" exit 1 ;; esac