On Apr 15, 2011, at 7:15 AM, Glen Beane wrote:

I have been having trouble uploading a large number of fastq files to a library (180).  I am uploading a directory of files, and I am not copying the files into Galaxy.

When I try to view the files in the library after uploading it takes a long time to load the library view (sometimes it times out), and when it does load it lists every file three times so instead of there being 180 fastq files in the library there are 540.  I have tried this multiple times after deleting the library and starting over, and each time it looks like there are three copies of each file.

Has anyone else had trouble uploading a large number of fastq files into a library at the same time?  I tried to delete a bunch of the duplicate files but it just timed out.

I ended up creating 6 libraries, and split the files between these with no problems.  It seems there is a problem when uploading a large number of files into a single library.   I could open the library maybe one time out of 6, the rest it would time out, and when it did open each file showed up three times.  After I split between 6 different libraries they open almost instantly and each file shows up once.

I am running the last dist release, not the most recent one.

--

Glen L. Beane

Senior Software Engineer

The Jackson Laboratory

(207) 288-6153

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--
Glen L. Beane
Senior Software Engineer
The Jackson Laboratory
(207) 288-6153





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 http://lists.bx.psu.edu/