Last week, I cloned Galaxy from Github. I uploaded a VCF file from my computer. I also installed the following additional software:
apt-get -qq update && apt-get install --no-install-recommends -y libcurl4-openssl-dev libxml2-dev
apt-get install apt-transport-https python-dev libc-dev pandoc pkg-config liblzma-dev libbz2-dev libpcre3-dev
apt-get install libblas-dev liblapack-dev gfortran libzmq3-dev curl
apt-get install libfreetype6-dev libpng-dev net-tools procps r-base libreadline-devĀ
pip install distribute --upgrade
pip install scipy sklearn-pandas bioblend matplotlib patsy pysam khmer ggplot mpld3 sympy rpy2
pip install pyzmq ipython==2.4 jinja2 tornado pygments numpy biopython scikit-learn pandas
Thank you in advance.