On Sep 11, 2013, at 11:52 AM, "Lukasse, Pieter" <pieter.lukasse@wur.nl> wrote:

Hi Greg,

I want to make a toolshed package with the following contents:

The above "package" is actually a mercurial repository in the tool shed.

· A number of tools

The following pages will provide all of the information you'll need for building Galaxy tools for the Tool Shed.

http://wiki.galaxyproject.org/ToolShedToolFeatures

· Some workflows

The following pages provide information for enabling workflow sharing via the Tool Shed.

http://wiki.galaxyproject.org/ToolShedWorkflowSharing

· Datatypes

Datatype features in the Tool Shed are described in the following pages:

http://wiki.galaxyproject.org/ToolShedDatatypesFeatures

· Installation configurations for installing external tools like R, Gnuplot and X!Tandem

The above information is document in the "ToolShedToolFeatures" section of the wiki, specifically in the following pages:

http://wiki.galaxyproject.org/ToolShedToolFeatures#Automatic_third-party_tool_dependency_installation_and_compilation_with_installed_repositories

· Dependencies configurations to other packages

If by "packages", you are referring to other tool shed repositories, then the documentation describing defining these relationships is located in the following pages:

http://wiki.galaxyproject.org/DefiningRepositoryDependencies

Is there a HOWTO wiki page where I can find exactly which files I should add to the .zip file and how they should be named? Or maybe an example package which I could use?

Regards,

Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB,
Wageningen, the Netherlands
+31-317480891; skype: pieter.lukasse.wur
http://www.pri.wur.nl