Well I got all the rw permissions changed correctly except for the metadata files written to the temp directory (new_file_path). I still can’t seem to track down where those are written. Any help would be greatly
appreciated.
Best,
Ilya
From: galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu]
On Behalf Of Chorny, Ilya
Sent: Monday, July 25, 2011 4:29 PM
To: galaxy-dev@lists.bx.psu.edu
Subject: [galaxy-dev] set_matadata_externally =True
I am still working on the patch to submit jobs as the actual user under SGE . I have it working for the default case but it fails for the case of set_metadata_externally = TRUE. Can someone point me to where the metadata files are created
so that I can change the permissions for those files?
Also, I have to addusers to the galaxy group in order for this to work because the galaxy_*.sh scripts are created as executable only by members of the galaxy group. I want to change this so that all users can execute these scripts. Any
help on where in the code these scripts are created?
Upon completion I will create a galaxy central fork and upload my changes to it.
Thanks,
Ilya
Ilya Chorny Ph.D.
Bioinformatics – Intern
858-202-4582