Louise-Amélie Schmitt wrote:
Hi,
I ran into a little something that is a bit annoying for debug when trying to upload files through the API with library_upload_from_import_dir.py. When the specified folder is wrong, python tries to process the error tuple like a dict, so the original error is hard to find.
I modified a little the code to avoid that. It might not work in all cases but at least it solved my problem.
Here is the original code:
lib/galaxy/web/api/contents.py l.145->end
else: rval = [] for k, v in output.items(): if type( v ) == trans.app.model.LibraryDatasetDatasetAssociation: v = v.library_dataset encoded_id = trans.security.encode_id( create_type + '.' + str( v.id ) ) rval.append( dict( id = encoded_id, name = v.name, url = url_for( 'content', library_id=library_id, id=encoded_id ) ) ) return rval
Here is how I modified it:
else: rval = [] try: for k, v in output.items(): if type( v ) == trans.app.model.LibraryDatasetDatasetAssociation: v = v.library_dataset encoded_id = trans.security.encode_id( create_type + '.' + str( v.id ) ) rval.append( dict( id = encoded_id, name = v.name, url = url_for( 'content', library_id=library_id, id=encoded_id ) ) ) return rval except: log.debug( 'HTTP Error %s: %s' % ( output[0], output[1] ) ) return None
Since it saves me some time & energy I just wanted to share it, so I hope it can help. Best L-A
Hi L-A, Thanks for finding this. It's been fixed in 5952:832538ba7258. --nate
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: