On Tue, Oct 15, 2013 at 10:13 AM, Stanislas Werfel
<Werfel@ipt.med.tum.de> wrote:
>
> I'm also having another issue: when I delete files in the history in galaxy,
> they don't acually get deleted in the files/000/ folder. And galaxy is still
> showing them under "Using ..." in the total space used. So if I download
> a 3GB fastq file, then delete everything in the history, Using is still showing
> 3GB and the file is still there in the folder.

I can't help with the first problem, but I believe the second is easier:
The data isn't immediately deleted and therefore your usage figure
(and quota) do not get updated right away. This is usually done via a
house keeping cron job, see:

http://wiki.galaxyproject.org/Admin/Config/Performance/Purge%20Histories%20and%20Datasets

Peter

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