Hi Dave, The nightly tests for my tools using Biopython are mostly working, e.g. http://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_filter_by_id http://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_rename However, I had an odd failure last night: http://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_select_by_id/9e9e3b860aa0 Automated tool test results Tool test results Automated test environment Time tested: ~ 11 hours ago System: Linux 3.0.0-1-amd64 Architecture: x86_64 Python version: 2.7.2+ Galaxy revision: 11038:315018626d87 Galaxy database version: 117 Tool shed revision: 11020:95815478f355 Tool shed database version: 21 Tool shed mercurial version: 2.2.3 Tests that failed Tool id: seq_select_by_id Tool version: seq_select_by_id Test: test_tool_000000 (functional.test_toolbox.TestForTool_testtoolshed.g2.bx.psu.edu/repos/peterjc/seq_select_by_id/seq_select_by_id/0.0.6) Stderr: Fatal error: Exit code 1 () Biopython 1.54 or later is required Traceback: Traceback (most recent call last): File "/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-test-tool-shed-py27/build/test/functional/test_toolbox.py", line 171, in test_tool self.do_it( td, shed_tool_id=shed_tool_id ) File "/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-test-tool-shed-py27/build/test/functional/test_toolbox.py", line 102, in do_it self.verify_dataset_correctness( outfile, hid=elem_hid, maxseconds=testdef.maxseconds, attributes=attributes, shed_tool_id=shed_tool_id ) File "/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-test-tool-shed-py27/build/test/base/twilltestcase.py", line 782, in verify_dataset_correctness self._assert_dataset_state( elem, 'ok' ) File "/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-test-tool-shed-py27/build/test/base/twilltestcase.py", line 606, in _assert_dataset_state raise AssertionError( errmsg ) AssertionError: Expecting dataset state 'ok', but state is 'error'. Dataset blurb: error There are no installation problems shown, yet the Biopython import line inside seq_select_by_id.py is failing. Could you send me the logs from this failure? Perhaps we have a silent installation failure? Thanks, Peter