Re: [galaxy-dev] Filtering dynamic options in tool with <filter> tagset

27 Jan 2016

      Hi Hans-Rudolf

Thanks again, you’re a lifesaver!
Any suggestions on how I could eliminate the <code> tag, as the wiki states it’s deprecated?
I checked out <actions> but don’t see a straightforward wau to get the same results.

Matthias
...
Op 27 jan. 2016, om 10:20 heeft Hans-Rudolf Hotz <hrh@fmi.ch> het volgende geschreven:
Hi Matthias
I don't think you can do that...I would delegate the filtering to the 'list_files' function, i.e. by calling:
list_files(archive_source,query)
Regards, Hans-Rudolf
On 01/27/2016 10:07 AM, Matthias De Smet wrote:
...
Hi All,
I’m trying to implement a tool that get a list of options through the “dynamic_options” tag. I try to filter the options that get returned with another param, but it doensn’t seem to work.
my tool xml looks like this
<tool id="archivetolibrary" name="Copy files" version="0.1.0">
  <description>from the archive to a data library</description>
  <code file="list_files.py"/>
  <command interpreter="bash">
    test.sh > $log
  </command>
  <inputs>
    <param name="archive_source" type="select" display="radio" label="Choose source archive">
      <options from_file="archives.loc">
        <column name="name" index="0"/>
        <column name="value" index="1"/>
      </options>
    </param>
    <param name="query" type="text" label="Search for files"/>
    <param name="selected_file" type="select" label="Choose your file" dynamic_options="list_files(archive_source)">
      <filter type="param_value" ref="query" column="0" />
    </param>
</inputs>
  <outputs>
    <data name="log" format="txt" label="${tool.name} on ${on_string}"></data>
 </outputs>
  <tests>
    <test>
    </test>
  </tests>
  <help>
  </help>
</tool>
Anyone with experience implementing filters? (Gx 15.10 on Ubuntu 14.04.3)
Thanks!
Matthias
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