I tried using IE 11.0.9600.17280 and updated to the latest Galaxy but am still having the problems listed below. It’s not a big deal for us – we’ve just told
users not to use IE.
Dori
**********************************
Dori Sajdak
Senior Systems Administrator
State University of NY at Buffalo
Center for Computational Research
701 Ellicott St
Buffalo, NY 14203
Phone: (716) 881-8934
Fax: (716) 849-6656
**********************************
From: Dannon Baker [mailto:dannon.baker@gmail.com]
Sent: Friday, September 19, 2014 6:29 AM
To: Lukasse, Pieter
Cc: Carl Eberhard; Sajdak, Doris; galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] IE 11 issues
Hi Pieter,
I updated the jQuery library that ships with galaxy in revision 14425:068fa60b8c2b on August 19, which should hopefully have resolved these issues. Are you still seeing problems on a galaxy server updated past that revision?
-Dannon
On Fri, Sep 19, 2014 at 4:45 AM, Lukasse, Pieter <pieter.lukasse@wur.nl> wrote:
Hi Carl,
Any news on this?
Thanks,
Pieter.
From: galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu] On Behalf Of Carl Eberhard
Sent: dinsdag 29 juli 2014 16:35
To: Sajdak, Doris
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] IE 11 issues
That's what I was getting as well.
It looks like this is an issue with IE11's event management API and our version of jQuery. I'll see if I can find a fix or alternately see if an updated jQuery will still cause this error.
If this is blocking your analyses, I'd unfortunately recommend using either Chrome/Firefox or an older version of IE (10?). You might also try using IE's compatibility mode but this must be set on a per browser basis and might be tedious: https://kb.wisc.edu/page.php?id=35591
I'll update when I find out more and thanks for the report,
Carl
On Mon, Jul 28, 2014 at 1:24 PM, Sajdak, Doris <djm29@buffalo.edu> wrote:
Hi Carl,
Thanks for the help. Here’s what I get when I try to upload a new file:
SCRIPT438: Object doesn't support property or method 'attachEvent'
File: jquery.js, Line: 1514, Column: 3
SCRIPT5009: 'jQuery' is undefined
File: jquery.migrate.js, Line: 6, Column: 2
SCRIPT5009: 'jQuery' is undefined
File: select2.js, Line: 21, Column: 2
SCRIPT5007: Unable to get property 'fn' of undefined or null reference
File: bootstrap.js, Line: 44, Column: 3
SCRIPT5009: '$' is undefined
File: galaxy.base.js, Line: 52, Column: 1
SCRIPT5009: 'jQuery' is undefined
File: ui.js, Line: 735, Column: 5
SCRIPT5009: '$' is undefined
File: tool_runner, Line: 64, Column: 13
SCRIPT5007: Unable to get property 'extend' of undefined or null reference
File: galaxy.panels.js, Line: 28, Column: 1
SCRIPT5002: Function expected
File: tool_runner, Line: 80, Column: 5
SCRIPT438: Object doesn't support property or method 'attachEvent'
File: root, Line: 1514, Column: 3
SCRIPT5002: Function expected
File: galaxy.tools.js, Line: 9, Column: 5
SCRIPT70: Permission denied
File: root, Line: 1182, Column: 2
SCRIPT70: Permission denied
File: root, Line: 1182, Column: 2
I get the following when I click on the edit button next to one of the items in my history:
SCRIPT438: Object doesn't support property or method 'attachEvent'
File: jquery.js, Line: 1514, Column: 3
SCRIPT5009: 'jQuery' is undefined
File: jquery.migrate.js, Line: 6, Column: 2
SCRIPT5009: 'jQuery' is undefined
File: select2.js, Line: 21, Column: 2
SCRIPT5007: Unable to get property 'fn' of undefined or null reference
File: bootstrap.js, Line: 44, Column: 3
SCRIPT5009: '$' is undefined
File: galaxy.base.js, Line: 52, Column: 1
SCRIPT5009: 'jQuery' is undefined
File: ui.js, Line: 735, Column: 5
SCRIPT5009: 'jQuery' is undefined
File: jquery.autocomplete.js, Line: 9, Column: 2
SCRIPT5009: 'jQuery' is undefined
File: galaxy.autocom_tagging.js, Line: 20, Column: 1
SCRIPT5009: '$' is undefined
File: edit, Line: 528, Column: 9
SCRIPT438: Object doesn't support property or method 'attachEvent'
File: root, Line: 1514, Column: 3
This is what I get from ‘hg summary:’
parent: 12442:29ce93a13ac7 tip
Merge stable branch.
branch: default
commit: 1 modified, 177 unknown
update: (current)
Hope that helps. We’re very new to Galaxy so I won’t be surprised if it’s something wrong on my end.
Thanks,
Dori
From: Carl Eberhard [mailto:carlfeberhard@gmail.com]
Sent: Monday, July 28, 2014 10:55 AM
To: Björn Grüning
Cc: galaxy-dev@lists.bx.psu.edu; Sajdak, Doris
Subject: Re: [galaxy-dev] IE 11 issues
Hi, Dori
Galaxy supports IE 10+ so this is definitely a bug. I'm checking for bugs in the history panel now, but in the meantime:
- can you open the javascript console in your IE and see if any errors are displayed when doing the two tasks you mention? http://msdn.microsoft.com/en-us/library/ie/bg182326%28v=vs.85%29.aspx
- What version of Galaxy does your lab use currently? (You can view the version by using the 'hg summary' command from the directory from which Galaxy is run)
As an aside, IE has traditionally veered away from web standards and made it difficult to program compatible sites. Recent versions of IE have become much more standards compliant allowing us to support them well enough.
Please don't hesitate to report IE (10+) bugs when using Galaxy.
Thanks for the report and I'll update with my findings soon,
Carl
On Mon, Jul 28, 2014 at 10:42 AM, Björn Grüning <bjoern.gruening@gmail.com> wrote:
Hi Dori,
the IE is not really supported. There are many issues with IE and it's hard to deal with that. If possible please you Chrome or FF, both are supported and tested.
Cheers,
Bjoern
Am 28.07.2014 um 16:40 schrieb Sajdak, Doris:We are having issues with using Galaxy in Internet Explorer 11 (these work fine in Chrome & Firefox).
1. The jobs queued and history doesn't display unless you refresh the browser window. Clicking the history reload icon doesn't work.
2. If I click to edit something in the history, the tabs aren't clickable. Attributes are displayed but I can't click on Convert Format, Datatype, or Permissions.
Anyone else having this problem? I apologize if this information is documented somewhere but I was unable to find it.
Thank you for your assistance,
Dori
**********************************
Dori Sajdak
Senior Systems Administrator
State University of NY at Buffalo
Center for Computational Research
701 Ellicott St
Buffalo, NY 14203
Phone: (716) 881-8934
Fax: (716) 849-6656
Web: http://ccr.buffalo.edu
**********************************
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___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
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To search Galaxy mailing lists use the unified search at:
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