Please keep all replies on the list by using "reply all"! You can write a wrapper around tophat2 and redirect the output to any directory you want - as long as galaxy has write access to the directory. However, the output will no longer be accessible as a history item. Regards, Hans On 12/27/2012 11:19 AM, Sachit Adhikari wrote:
Hi Hans,
Oh yes it is stored in database/files. What I wanted to know was if I can change the output path of one or two tools. Let's say if I want to change the path of tophat2, what should I do?
Thanks,
Sachit
On Thu, Dec 27, 2012 at 9:38 AM, Hans-Rudolf Hotz <hrh@fmi.ch <mailto:hrh@fmi.ch>> wrote:
Hi Sachit
They are stored in ~/database/files/
and you can change it by changing the value for "file_path" in the 'universe_wsgi.ini' file.
Regardd, Hans
On 12/26/2012 11:40 AM, Sachit Adhikari wrote:
Hello Everyone,
*Merry Christmas and Happy New Year* *
* I was wondering where are the output of the tools stored in the machine where the galaxy is hosted? And, can I change the path of the output of the tools?
Thanks,
Sachit
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