##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM584v2 #!genome-build-accession NCBI_Assembly:GCF_000005845.2 ##sequence-region NC_000913.3 1 4641652 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=511145 NC_000913.3 RefSeq region 1 4641652 . + . ID=id0;Dbxref=taxon:511145;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=K-12;substrain=MG1655 NC_000913.3 RefSeq gene 190 255 . + . ID=gene0;Dbxref=EcoGene:EG11277,GeneID:944742;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;gene_synonym=ECK0001,JW4367;locus_tag=b0001 NC_000913.3 RefSeq CDS 190 255 . + 0 ID=cds0;Parent=gene0;Dbxref=ASAP:ABE-0000006,UniProtKB/Swiss-Prot:P0AD86,Genbank:NP_414542.1,EcoGene:EG11277,GeneID:944742;Name=NP_414542.1;gbkey=CDS;gene=thrL;product=thr operon leader peptide;protein_id=NP_414542.1;transl_table=11 NC_000913.3 RefSeq gene 337 2799 . + . ID=gene1;Dbxref=EcoGene:EG10998,GeneID:945803;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;gene_synonym=ECK0002,Hs,JW0001,thrA1,thrA2,thrD;locus_tag=b0002 NC_000913.3 RefSeq CDS 337 2799 . + 0 ID=cds1;Parent=gene1;Dbxref=ASAP:ABE-0000008,UniProtKB/Swiss-Prot:P00561,Genbank:NP_414543.1,EcoGene:EG10998,GeneID:945803;Name=NP_414543.1;Note=bifunctional: aspartokinase I (N-terminal)%3B homoserine dehydrogenase I (C-terminal);gbkey=CDS;gene=thrA;product=Bifunctional aspartokinase/homoserine dehydrogenase 1;protein_id=NP_414543.1;transl_table=11 NC_000913.3 RefSeq gene 2801 3733 . + . ID=gene2;Dbxref=EcoGene:EG10999,GeneID:947498;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;gene_synonym=ECK0003,JW0002;locus_tag=b0003 NC_000913.3 RefSeq CDS 2801 3733 . + 0 ID=cds2;Parent=gene2;Dbxref=ASAP:ABE-0000010,UniProtKB/Swiss-Prot:P00547,Genbank:NP_414544.1,EcoGene:EG10999,GeneID:947498;Name=NP_414544.1;gbkey=CDS;gene=thrB;product=homoserine kinase;protein_id=NP_414544.1;transl_table=11 NC_000913.3 RefSeq gene 3734 5020 . + . ID=gene3;Dbxref=EcoGene:EG11000,GeneID:945198;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;gene_synonym=ECK0004,JW0003;locus_tag=b0004 NC_000913.3 RefSeq CDS 3734 5020 . + 0 ID=cds3;Parent=gene3;Dbxref=ASAP:ABE-0000012,UniProtKB/Swiss-Prot:P00934,Genbank:NP_414545.1,EcoGene:EG11000,GeneID:945198;Name=NP_414545.1;gbkey=CDS;gene=thrC;product=L-threonine synthase;protein_id=NP_414545.1;transl_table=11 NC_000913.3 RefSeq gene 5234 5530 . + . ID=gene4;Dbxref=EcoGene:EG14384,GeneID:944747;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;gene_synonym=ECK0005,JW0004;locus_tag=b0005 NC_000913.3 RefSeq CDS 5234 5530 . + 0 ID=cds4;Parent=gene4;Dbxref=ASAP:ABE-0000015,UniProtKB/Swiss-Prot:P75616,Genbank:NP_414546.1,EcoGene:EG14384,GeneID:944747;Name=NP_414546.1;gbkey=CDS;gene=yaaX;product=DUF2502 family putative periplasmic protein;protein_id=NP_414546.1;transl_table=11 NC_000913.3 RefSeq repeat_region 5565 5669 . + . ID=id1;Note=RIP1 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 5683 6459 . - . ID=gene5;Dbxref=EcoGene:EG10011,GeneID:944749;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;gene_synonym=ECK0006,JW0005;locus_tag=b0006 NC_000913.3 RefSeq CDS 5683 6459 . - 0 ID=cds5;Parent=gene5;Dbxref=ASAP:ABE-0000018,UniProtKB/Swiss-Prot:P0A8I3,Genbank:NP_414547.1,EcoGene:EG10011,GeneID:944749;Name=NP_414547.1;gbkey=CDS;gene=yaaA;product=peroxide resistance protein%2C lowers intracellular iron;protein_id=NP_414547.1;transl_table=11 NC_000913.3 RefSeq gene 6529 7959 . - . ID=gene6;Dbxref=EcoGene:EG11555,GeneID:944745;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;gene_synonym=ECK0007,JW0006;locus_tag=b0007 NC_000913.3 RefSeq CDS 6529 7959 . - 0 ID=cds6;Parent=gene6;Dbxref=ASAP:ABE-0000020,UniProtKB/Swiss-Prot:P30143,Genbank:NP_414548.1,EcoGene:EG11555,GeneID:944745;Name=NP_414548.1;Note=inner membrane transport protein;gbkey=CDS;gene=yaaJ;product=putative transporter;protein_id=NP_414548.1;transl_table=11 NC_000913.3 RefSeq gene 8238 9191 . + . ID=gene7;Dbxref=EcoGene:EG11556,GeneID:944748;Name=talB;gbkey=Gene;gene=talB;gene_biotype=protein_coding;gene_synonym=ECK0008,JW0007,yaaK;locus_tag=b0008 NC_000913.3 RefSeq CDS 8238 9191 . + 0 ID=cds7;Parent=gene7;Dbxref=ASAP:ABE-0000027,UniProtKB/Swiss-Prot:P0A870,Genbank:NP_414549.1,EcoGene:EG11556,GeneID:944748;Name=NP_414549.1;gbkey=CDS;gene=talB;product=transaldolase B;protein_id=NP_414549.1;transl_table=11 NC_000913.3 RefSeq gene 9306 9893 . + . ID=gene8;Dbxref=EcoGene:EG11511,GeneID:944760;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;gene_synonym=bisD,chlG,ECK0009,JW0008,mogA,yaaG;locus_tag=b0009 NC_000913.3 RefSeq CDS 9306 9893 . + 0 ID=cds8;Parent=gene8;Dbxref=ASAP:ABE-0000030,UniProtKB/Swiss-Prot:P0AF03,Genbank:NP_414550.1,EcoGene:EG11511,GeneID:944760;Name=NP_414550.1;Note=putative molybdochetalase in molybdopterine biosynthesis;gbkey=CDS;gene=mog;product=molybdochelatase incorporating molybdenum into molybdopterin;protein_id=NP_414550.1;transl_table=11 NC_000913.3 RefSeq gene 9928 10494 . - . ID=gene9;Dbxref=EcoGene:EG11512,GeneID:944792;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;gene_synonym=ECK0010,JW0009,yaaH;locus_tag=b0010 NC_000913.3 RefSeq CDS 9928 10494 . - 0 ID=cds9;Parent=gene9;Dbxref=ASAP:ABE-0000032,UniProtKB/Swiss-Prot:P0AC98,Genbank:NP_414551.1,EcoGene:EG11512,GeneID:944792;Name=NP_414551.1;gbkey=CDS;gene=satP;product=succinate-acetate transporter;protein_id=NP_414551.1;transl_table=11 NC_000913.3 RefSeq gene 10643 11356 . - . ID=gene10;Dbxref=EcoGene:EG14340,GeneID:944771;Name=yaaW;gbkey=Gene;gene=yaaW;gene_biotype=protein_coding;gene_synonym=ECK0011,JW0010;locus_tag=b0011 NC_000913.3 RefSeq CDS 10643 11356 . - 0 ID=cds10;Parent=gene10;Dbxref=ASAP:ABE-0000037,UniProtKB/Swiss-Prot:P75617,Genbank:NP_414552.1,EcoGene:EG14340,GeneID:944771;Name=NP_414552.1;gbkey=CDS;gene=yaaW;product=UPF0174 family protein;protein_id=NP_414552.1;transl_table=11 NC_000913.3 RefSeq gene 11382 11786 . - . ID=gene11;Dbxref=EcoGene:EG11513,GeneID:944751;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;gene_synonym=ECK0013,JW0012;locus_tag=b0013 NC_000913.3 RefSeq CDS 11382 11786 . - 0 ID=cds11;Parent=gene11;Dbxref=ASAP:ABE-0000043,UniProtKB/Swiss-Prot:P28696,Genbank:NP_414554.1,EcoGene:EG11513,GeneID:944751;Name=NP_414554.1;gbkey=CDS;gene=yaaI;product=UPF0412 family protein;protein_id=NP_414554.1;transl_table=11 NC_000913.3 RefSeq gene 12163 14079 . + . ID=gene12;Dbxref=EcoGene:EG10241,GeneID:944750;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;gene_synonym=ECK0014,groPAB,groPC,groPF,grpC,grpF,JW0013,seg;locus_tag=b0014 NC_000913.3 RefSeq CDS 12163 14079 . + 0 ID=cds12;Parent=gene12;Dbxref=ASAP:ABE-0000052,UniProtKB/Swiss-Prot:P0A6Y8,Genbank:NP_414555.1,EcoGene:EG10241,GeneID:944750;Name=NP_414555.1;Note=chaperone Hsp70%3B DNA biosynthesis%3B autoregulated heat shock proteins;gbkey=CDS;gene=dnaK;product=chaperone Hsp70%2C with co-chaperone DnaJ;protein_id=NP_414555.1;transl_table=11 NC_000913.3 RefSeq gene 14168 15298 . + . ID=gene13;Dbxref=EcoGene:EG10240,GeneID:944753;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;gene_synonym=ECK0015,faa,groP,grpC,JW0014;locus_tag=b0015 NC_000913.3 RefSeq CDS 14168 15298 . + 0 ID=cds13;Parent=gene13;Dbxref=ASAP:ABE-0000054,UniProtKB/Swiss-Prot:P08622,Genbank:NP_414556.1,EcoGene:EG10240,GeneID:944753;Name=NP_414556.1;Note=chaperone with DnaK%3B heat shock protein;gbkey=CDS;gene=dnaJ;product=chaperone Hsp40%2C DnaK co-chaperone;protein_id=NP_414556.1;transl_table=11 NC_000913.3 RefSeq region 15387 16731 . + . ID=id2;gbkey=mobile_element NC_000913.3 RefSeq gene 15445 16557 . + . ID=gene14;Dbxref=EcoGene:EG40012,GeneID:944754;Name=insL1;gbkey=Gene;gene=insL1;gene_biotype=protein_coding;gene_synonym=ECK0016;locus_tag=b0016 NC_000913.3 RefSeq CDS 15445 16557 . + 0 ID=cds14;Parent=gene14;Dbxref=ASAP:ABE-0000058,UniProtKB/Swiss-Prot:P0CF91,Genbank:NP_414557.1,EcoGene:EG40012,GeneID:944754;Name=NP_414557.1;gbkey=CDS;gene=insL1;product=IS186 transposase;protein_id=NP_414557.1;transl_table=11 NC_000913.3 RefSeq gene 16751 16960 . - . ID=gene15;Dbxref=EcoGene:EG12074,GeneID:944756;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;gene_synonym=ECK4466,gefL;locus_tag=b0018 NC_000913.3 RefSeq CDS 16751 16960 . - 0 ID=cds15;Parent=gene15;Dbxref=ASAP:ABE-0000064,UniProtKB/Swiss-Prot:P33236,Genbank:NP_414559.1,EcoGene:EG12074,GeneID:944756;Name=NP_414559.1;Note=regulatory peptide whose translation enables hokC (gef) expression~completely contained in another CDS;gbkey=CDS;gene=mokC;product=regulatory protein for HokC%2C overlaps CDS of hokC;protein_id=NP_414559.1;transl_table=11 NC_000913.3 RefSeq gene 16751 16903 . - . ID=gene16;Dbxref=EcoGene:EG10373,GeneID:2847744;Name=hokC;gbkey=Gene;gene=hokC;gene_biotype=protein_coding;gene_synonym=ECK0018,gef,JW5879;locus_tag=b4412 NC_000913.3 RefSeq CDS 16751 16903 . - 0 ID=cds16;Parent=gene16;Dbxref=ASAP:ABE-0047278,UniProtKB/Swiss-Prot:P0ACG4,Genbank:YP_025292.1,EcoGene:EG10373,GeneID:2847744;Name=YP_025292.1;Note=small toxic membrane polypeptide~completely contained in another CDS;gbkey=CDS;gene=hokC;product=toxic membrane protein%2C small;protein_id=YP_025292.1;transl_table=11 NC_000913.3 RefSeq gene 16952 17006 . + . ID=gene17;Dbxref=EcoGene:EG31128,GeneID:2847745;Name=sokC;gbkey=Gene;gene=sokC;gene_biotype=antisense_RNA;gene_synonym=ECK0019,JWR0224,sof;locus_tag=b4413 NC_000913.3 RefSeq ncRNA 16952 17006 . + . ID=rna0;Parent=gene17;Dbxref=ASAP:ABE-0047238,EcoGene:EG31128,GeneID:2847745;Note=IS186A interrupts hokC transcript downstream of hokC gene in K-12;gbkey=ncRNA;gene=sokC;ncrna_class=antisense_RNA;product=sRNA antisense regulator blocking mokC%2C and hence hokC%2C translation NC_000913.3 RefSeq exon 16952 17006 . + . ID=id3;Parent=rna0;Dbxref=ASAP:ABE-0047238,EcoGene:EG31128,GeneID:2847745;Note=IS186A interrupts hokC transcript downstream of hokC gene in K-12;gbkey=ncRNA;gene=sokC;ncrna_class=antisense_RNA;product=sRNA antisense regulator blocking mokC%2C and hence hokC%2C translation NC_000913.3 RefSeq gene 17489 18655 . + . ID=gene18;Dbxref=EcoGene:EG10652,GeneID:944758;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;gene_synonym=ant,antA,ECK0020,JW0018;locus_tag=b0019 NC_000913.3 RefSeq CDS 17489 18655 . + 0 ID=cds17;Parent=gene18;Dbxref=ASAP:ABE-0000068,UniProtKB/Swiss-Prot:P13738,Genbank:NP_414560.1,EcoGene:EG10652,GeneID:944758;Name=NP_414560.1;Note=Na+/H antiporter%2C pH dependent;gbkey=CDS;gene=nhaA;product=sodium-proton antiporter;protein_id=NP_414560.1;transl_table=11 NC_000913.3 RefSeq gene 18715 19620 . + . ID=gene19;Dbxref=EcoGene:EG11078,GeneID:944757;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;gene_synonym=antO,ECK0021,JW0019,yaaB;locus_tag=b0020 NC_000913.3 RefSeq CDS 18715 19620 . + 0 ID=cds18;Parent=gene19;Dbxref=ASAP:ABE-0000072,UniProtKB/Swiss-Prot:P0A9G2,Genbank:NP_414561.1,EcoGene:EG11078,GeneID:944757;Name=NP_414561.1;Note=transcriptional activator of nhaA;gbkey=CDS;gene=nhaR;product=transcriptional activator of nhaA;protein_id=NP_414561.1;transl_table=11 NC_000913.3 RefSeq region 19796 20563 . - . ID=id4;gbkey=mobile_element NC_000913.3 RefSeq gene 19811 20314 . - . ID=gene20;Dbxref=EcoGene:EG40002,GeneID:944743;Name=insB1;gbkey=Gene;gene=insB1;gene_biotype=protein_coding;gene_synonym=ECK0022;locus_tag=b0021 NC_000913.3 RefSeq CDS 19811 20314 . - 0 ID=cds19;Parent=gene20;Dbxref=ASAP:ABE-0000075,UniProtKB/Swiss-Prot:P0CF25,Genbank:NP_414562.1,EcoGene:EG40002,GeneID:944743;Name=NP_414562.1;gbkey=CDS;gene=insB1;product=IS1 transposase B;protein_id=NP_414562.1;transl_table=11 NC_000913.3 RefSeq gene 20233 20508 . - . ID=gene21;Dbxref=EcoGene:EG40001,GeneID:948449;Name=insA;Note=insA1;gbkey=Gene;gene=insA;gene_biotype=protein_coding;gene_synonym=ECK0023;locus_tag=b0022 NC_000913.3 RefSeq CDS 20233 20508 . - 0 ID=cds20;Parent=gene21;Dbxref=ASAP:ABE-0000078,UniProtKB/Swiss-Prot:P0CF07,Genbank:NP_414563.1,EcoGene:EG40001,GeneID:948449;Name=NP_414563.1;gbkey=CDS;gene=insA;product=IS1 repressor TnpA;protein_id=NP_414563.1;transl_table=11 NC_000913.3 RefSeq gene 20815 21078 . - . ID=gene22;Dbxref=EcoGene:EG10919,GeneID:944759;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;gene_synonym=ECK0024,JW0022,sup;locus_tag=b0023 NC_000913.3 RefSeq CDS 20815 21078 . - 0 ID=cds21;Parent=gene22;Dbxref=ASAP:ABE-0000082,UniProtKB/Swiss-Prot:P0A7U7,Genbank:NP_414564.1,EcoGene:EG10919,GeneID:944759;Name=NP_414564.1;gbkey=CDS;gene=rpsT;product=30S ribosomal subunit protein S20;protein_id=NP_414564.1;transl_table=11 NC_000913.3 RefSeq gene 21181 21399 . + . ID=gene23;Dbxref=EcoGene:EG14386,GeneID:949128;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;gene_synonym=ECK0025,JW5003;locus_tag=b0024 NC_000913.3 RefSeq CDS 21181 21399 . + 0 ID=cds22;Parent=gene23;Dbxref=ASAP:ABE-0000089,UniProtKB/Swiss-Prot:P75620,Genbank:NP_414565.1,EcoGene:EG14386,GeneID:949128;Name=NP_414565.1;gbkey=CDS;gene=yaaY;product=uncharacterized protein;protein_id=NP_414565.1;transl_table=11 NC_000913.3 RefSeq gene 21407 22348 . + . ID=gene24;Dbxref=EcoGene:EG11079,GeneID:949129;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;gene_synonym=ECK0026,JW0023,yaaC;locus_tag=b0025 NC_000913.3 RefSeq CDS 21407 22348 . + 0 ID=cds23;Parent=gene24;Dbxref=ASAP:ABE-0000091,UniProtKB/Swiss-Prot:P0AG40,Genbank:NP_414566.1,EcoGene:EG11079,GeneID:949129;Name=NP_414566.1;gbkey=CDS;gene=ribF;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=NP_414566.1;transl_table=11 NC_000913.3 RefSeq gene 22391 25207 . + . ID=gene25;Dbxref=EcoGene:EG10492,GeneID:944761;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;gene_synonym=ECK0027,ilvS,JW0024;locus_tag=b0026 NC_000913.3 RefSeq CDS 22391 25207 . + 0 ID=cds24;Parent=gene25;Dbxref=ASAP:ABE-0000094,UniProtKB/Swiss-Prot:P00956,Genbank:NP_414567.1,EcoGene:EG10492,GeneID:944761;Name=NP_414567.1;Note=isoleucine tRNA synthetase;gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=NP_414567.1;transl_table=11 NC_000913.3 RefSeq gene 25207 25701 . + . ID=gene26;Dbxref=EcoGene:EG10548,GeneID:944800;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;gene_synonym=ECK0028,JW0025;locus_tag=b0027 NC_000913.3 RefSeq CDS 25207 25701 . + 0 ID=cds25;Parent=gene26;Dbxref=ASAP:ABE-0000096,UniProtKB/Swiss-Prot:P00804,Genbank:NP_414568.1,EcoGene:EG10548,GeneID:944800;Name=NP_414568.1;Note=prolipoprotein signal peptidase (SPase II);gbkey=CDS;gene=lspA;product=prolipoprotein signal peptidase (signal peptidase II);protein_id=NP_414568.1;transl_table=11 NC_000913.3 RefSeq repeat_region 25710 25795 . + . ID=id5;Note=REP2 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 25826 26275 . + . ID=gene27;Dbxref=EcoGene:EG11080,GeneID:944807;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;gene_synonym=ECK0029,JW0026,slpA,yaaD;locus_tag=b0028 NC_000913.3 RefSeq CDS 25826 26275 . + 0 ID=cds26;Parent=gene27;Dbxref=ASAP:ABE-0000101,UniProtKB/Swiss-Prot:P0AEM0,Genbank:NP_414569.1,EcoGene:EG11080,GeneID:944807;Name=NP_414569.1;gbkey=CDS;gene=fkpB;product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase);protein_id=NP_414569.1;transl_table=11 NC_000913.3 RefSeq gene 26277 27227 . + . ID=gene28;Dbxref=EcoGene:EG11081,GeneID:944777;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=ECK0030,JW0027,lytB,yaaE;locus_tag=b0029 NC_000913.3 RefSeq CDS 26277 27227 . + 0 ID=cds27;Parent=gene28;Dbxref=ASAP:ABE-0000103,UniProtKB/Swiss-Prot:P62623,Genbank:NP_414570.1,EcoGene:EG11081,GeneID:944777;Name=NP_414570.1;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase%2C 4Fe-4S protein;protein_id=NP_414570.1;transl_table=11 NC_000913.3 RefSeq gene 27293 28207 . + . ID=gene29;Dbxref=EcoGene:EG11082,GeneID:944796;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;gene_synonym=ECK0031,JW0028,yaaF;locus_tag=b0030 NC_000913.3 RefSeq CDS 27293 28207 . + 0 ID=cds28;Parent=gene29;Dbxref=ASAP:ABE-0000109,UniProtKB/Swiss-Prot:P22564,Genbank:NP_414571.1,EcoGene:EG11082,GeneID:944796;Name=NP_414571.1;gbkey=CDS;gene=rihC;product=ribonucleoside hydrolase 3;protein_id=NP_414571.1;transl_table=11 NC_000913.3 RefSeq gene 28374 29195 . + . ID=gene30;Dbxref=EcoGene:EG10206,GeneID:944762;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;gene_synonym=ECK0032,JW0029;locus_tag=b0031 NC_000913.3 RefSeq CDS 28374 29195 . + 0 ID=cds29;Parent=gene30;Dbxref=ASAP:ABE-0000112,UniProtKB/Swiss-Prot:P04036,Genbank:NP_414572.1,EcoGene:EG10206,GeneID:944762;Name=NP_414572.1;gbkey=CDS;gene=dapB;product=dihydrodipicolinate reductase;protein_id=NP_414572.1;transl_table=11 NC_000913.3 RefSeq gene 29651 30799 . + . ID=gene31;Dbxref=EcoGene:EG10134,GeneID:949025;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;gene_synonym=arg,cap,ECK0033,JW0030,pyrA;locus_tag=b0032 NC_000913.3 RefSeq CDS 29651 30799 . + 0 ID=cds30;Parent=gene31;Dbxref=ASAP:ABE-0000118,UniProtKB/Swiss-Prot:P0A6F1,Genbank:NP_414573.1,EcoGene:EG10134,GeneID:949025;Name=NP_414573.1;gbkey=CDS;gene=carA;product=carbamoyl phosphate synthetase small subunit%2C glutamine amidotransferase;protein_id=NP_414573.1;transl_table=11 NC_000913.3 RefSeq gene 30817 34038 . + . ID=gene32;Dbxref=EcoGene:EG10135,GeneID:944775;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;gene_synonym=cap,ECK0034,JW0031,pyrA;locus_tag=b0033 NC_000913.3 RefSeq CDS 30817 34038 . + 0 ID=cds31;Parent=gene32;Dbxref=ASAP:ABE-0000121,UniProtKB/Swiss-Prot:P00968,Genbank:NP_414574.1,EcoGene:EG10135,GeneID:944775;Name=NP_414574.1;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large subunit;protein_id=NP_414574.1;transl_table=11 NC_000913.3 RefSeq gene 34300 34695 . + . ID=gene33;Dbxref=EcoGene:EG13451,GeneID:944795;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;gene_synonym=ECK0035,JW0033;locus_tag=b0034 NC_000913.3 RefSeq CDS 34300 34695 . + 0 ID=cds32;Parent=gene33;Dbxref=ASAP:ABE-0000125,UniProtKB/Swiss-Prot:P0AE58,Genbank:NP_414576.4,EcoGene:EG13451,GeneID:944795;Name=NP_414576.4;Note=transcriptional regulator of cai operon;gbkey=CDS;gene=caiF;product=cai operon transcriptional activator;protein_id=NP_414576.4;transl_table=11 NC_000913.3 RefSeq repeat_region 34727 34762 . + . ID=id6;Note=REP3 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 34781 35371 . - . ID=gene34;Dbxref=EcoGene:EG12608,GeneID:948999;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;gene_synonym=ECK0036,JW5004;locus_tag=b0035 NC_000913.3 RefSeq CDS 34781 35371 . - 0 ID=cds33;Parent=gene34;Dbxref=ASAP:ABE-0000128,UniProtKB/Swiss-Prot:P39206,Genbank:NP_414577.2,EcoGene:EG12608,GeneID:948999;Name=NP_414577.2;Note=possible synthesis of cofactor for carnitine racemase and dehydratase;gbkey=CDS;gene=caiE;product=stimulator of CaiD and CaiB enzyme activities;protein_id=NP_414577.2;transl_table=11 NC_000913.3 RefSeq gene 35377 36162 . - . ID=gene35;Dbxref=EcoGene:EG11557,GeneID:948995;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;gene_synonym=ECK0037,JW0035,yaaL;locus_tag=b0036 NC_000913.3 RefSeq CDS 35377 36162 . - 0 ID=cds34;Parent=gene35;Dbxref=ASAP:ABE-0000130,UniProtKB/Swiss-Prot:P31551,Genbank:NP_414578.2,EcoGene:EG11557,GeneID:948995;Name=NP_414578.2;Note=carnitine racemase;gbkey=CDS;gene=caiD;product=carnitinyl-CoA dehydratase;protein_id=NP_414578.2;transl_table=11 NC_000913.3 RefSeq gene 36271 37824 . - . ID=gene36;Dbxref=EcoGene:EG11558,GeneID:944886;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;gene_synonym=ECK0038,JW0036,yaaM;locus_tag=b0037 NC_000913.3 RefSeq CDS 36271 37824 . - 0 ID=cds35;Parent=gene36;Dbxref=ASAP:ABE-0000133,UniProtKB/Swiss-Prot:P31552,Genbank:NP_414579.4,EcoGene:EG11558,GeneID:944886;Name=NP_414579.4;Note=probable crotonobetaine/carnitine-CoA ligase;gbkey=CDS;gene=caiC;product=putative crotonobetaine/carnitine-CoA ligase;protein_id=NP_414579.4;transl_table=11 NC_000913.3 RefSeq gene 37898 39115 . - . ID=gene37;Dbxref=EcoGene:EG11559,GeneID:948997;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;gene_synonym=ECK0039,JW0037,yaaN;locus_tag=b0038 NC_000913.3 RefSeq CDS 37898 39115 . - 0 ID=cds36;Parent=gene37;Dbxref=ASAP:ABE-0000136,UniProtKB/Swiss-Prot:P31572,Genbank:NP_414580.1,EcoGene:EG11559,GeneID:948997;Name=NP_414580.1;Note=l-carnitine dehydratase;gbkey=CDS;gene=caiB;product=crotonobetainyl CoA:carnitine CoA transferase;protein_id=NP_414580.1;transl_table=11 NC_000913.3 RefSeq repeat_region 39151 39232 . + . ID=id7;Note=REP4 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 39244 40386 . - . ID=gene38;Dbxref=EcoGene:EG11560,GeneID:949064;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;gene_synonym=ECK0040,JW0038,yaaO;locus_tag=b0039 NC_000913.3 RefSeq CDS 39244 40386 . - 0 ID=cds37;Parent=gene38;Dbxref=ASAP:ABE-0000139,UniProtKB/Swiss-Prot:P60584,Genbank:NP_414581.1,EcoGene:EG11560,GeneID:949064;Name=NP_414581.1;Note=probable carnitine operon oxidoreductase;gbkey=CDS;gene=caiA;product=crotonobetaine reductase subunit II%2C FAD-binding;protein_id=NP_414581.1;transl_table=11 NC_000913.3 RefSeq gene 40417 41931 . - . ID=gene39;Dbxref=EcoGene:EG11561,GeneID:944765;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;gene_synonym=ECK0041,JW0039,yaaP;locus_tag=b0040 NC_000913.3 RefSeq CDS 40417 41931 . - 0 ID=cds38;Parent=gene39;Dbxref=ASAP:ABE-0000141,UniProtKB/Swiss-Prot:P31553,Genbank:NP_414582.1,EcoGene:EG11561,GeneID:944765;Name=NP_414582.1;Note=probable carnitine transporter;gbkey=CDS;gene=caiT;product=putative transporter;protein_id=NP_414582.1;transl_table=11 NC_000913.3 RefSeq gene 42403 43173 . + . ID=gene40;Dbxref=EcoGene:EG11562,GeneID:947316;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;gene_synonym=ECK0042,JW0040,yaaQ;locus_tag=b0041 NC_000913.3 RefSeq CDS 42403 43173 . + 0 ID=cds39;Parent=gene40;Dbxref=ASAP:ABE-0000145,UniProtKB/Swiss-Prot:P60566,Genbank:NP_414583.2,EcoGene:EG11562,GeneID:947316;Name=NP_414583.2;Note=probable flavoprotein subunit%2C carnitine metabolism;gbkey=CDS;gene=fixA;product=anaerobic carnitine reduction putative electron transfer flavoprotein subunit;protein_id=NP_414583.2;transl_table=11 NC_000913.3 RefSeq gene 43188 44129 . + . ID=gene41;Dbxref=EcoGene:EG11563,GeneID:948939;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;gene_synonym=ECK0043,JW0041,yaaR;locus_tag=b0042 NC_000913.3 RefSeq CDS 43188 44129 . + 0 ID=cds40;Parent=gene41;Dbxref=ASAP:ABE-0000147,UniProtKB/Swiss-Prot:P31574,Genbank:NP_414584.1,EcoGene:EG11563,GeneID:948939;Name=NP_414584.1;Note=probable flavoprotein subunit%2C carnitine metabolism;gbkey=CDS;gene=fixB;product=putative electron transfer flavoprotein%2C NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein;protein_id=NP_414584.1;transl_table=11 NC_000913.3 RefSeq gene 44180 45466 . + . ID=gene42;Dbxref=EcoGene:EG11564,GeneID:948958;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;gene_synonym=ECK0044,JW0042,yaaS;locus_tag=b0043 NC_000913.3 RefSeq CDS 44180 45466 . + 0 ID=cds41;Parent=gene42;Dbxref=ASAP:ABE-0000149,UniProtKB/Swiss-Prot:P68644,Genbank:NP_414585.1,EcoGene:EG11564,GeneID:948958;Name=NP_414585.1;Note=flavoprotein%3B electron transport;gbkey=CDS;gene=fixC;product=putative oxidoreductase;protein_id=NP_414585.1;transl_table=11 NC_000913.3 RefSeq gene 45463 45750 . + . ID=gene43;Dbxref=EcoGene:EG11565,GeneID:948590;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;gene_synonym=ECK0045,JW0043,yaaT;locus_tag=b0044 NC_000913.3 RefSeq CDS 45463 45750 . + 0 ID=cds42;Parent=gene43;Dbxref=ASAP:ABE-0000151,UniProtKB/Swiss-Prot:P68646,Genbank:NP_414586.1,EcoGene:EG11565,GeneID:948590;Name=NP_414586.1;Note=putative ferredoxin;gbkey=CDS;gene=fixX;product=putative 4Fe-4S ferredoxin-type protein;protein_id=NP_414586.1;transl_table=11 NC_000913.3 RefSeq gene 45807 47138 . + . ID=gene44;Dbxref=EcoGene:EG11566,GeneID:944766;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=protein_coding;gene_synonym=ECK0046,JW0044,yabE;locus_tag=b0045 NC_000913.3 RefSeq CDS 45807 47138 . + 0 ID=cds43;Parent=gene44;Dbxref=ASAP:ABE-0000156,UniProtKB/Swiss-Prot:P31679,Genbank:NP_414587.1,EcoGene:EG11566,GeneID:944766;Name=NP_414587.1;Note=putative transport protein;gbkey=CDS;gene=yaaU;product=putative MFS sugar transporter%3B membrane protein;protein_id=NP_414587.1;transl_table=11 NC_000913.3 RefSeq gene 47246 47776 . + . ID=gene45;Dbxref=EcoGene:EG11568,GeneID:944767;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;gene_synonym=ECK0047,JW0045,yabF;locus_tag=b0046 NC_000913.3 RefSeq CDS 47246 47776 . + 0 ID=cds44;Parent=gene45;Dbxref=ASAP:ABE-0000159,UniProtKB/Swiss-Prot:P0A754,Genbank:NP_414588.1,EcoGene:EG11568,GeneID:944767;Name=NP_414588.1;Note=putative NAD(P)H oxidoreductase;gbkey=CDS;gene=kefF;product=potassium-efflux system ancillary protein for KefC%2C glutathione-regulated%3B quinone oxidoreductase%2C FMN-dependent;protein_id=NP_414588.1;transl_table=11 NC_000913.3 RefSeq gene 47769 49631 . + . ID=gene46;Dbxref=EcoGene:EG10521,GeneID:944773;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;gene_synonym=ECK0048,JW0046,trkC;locus_tag=b0047 NC_000913.3 RefSeq CDS 47769 49631 . + 0 ID=cds45;Parent=gene46;Dbxref=ASAP:ABE-0000161,UniProtKB/Swiss-Prot:P03819,Genbank:NP_414589.1,EcoGene:EG10521,GeneID:944773;Name=NP_414589.1;Note=K+ efflux antiporter%2C glutathione-regulated;gbkey=CDS;gene=kefC;product=potassium:proton antiporter;protein_id=NP_414589.1;transl_table=11 NC_000913.3 RefSeq gene 49823 50302 . + . ID=gene47;Dbxref=EcoGene:EG10326,GeneID:944790;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;gene_synonym=ECK0049,JW0047,tmrA;locus_tag=b0048 NC_000913.3 RefSeq CDS 49823 50302 . + 0 ID=cds46;Parent=gene47;Dbxref=ASAP:ABE-0000164,UniProtKB/Swiss-Prot:P0ABQ4,Genbank:NP_414590.1,EcoGene:EG10326,GeneID:944790;Name=NP_414590.1;Note=dihydrofolate reductase type I%3B trimethoprim resistance;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=NP_414590.1;transl_table=11 NC_000913.3 RefSeq repeat_region 50327 50363 . + . ID=id8;Note=REP5 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 50380 51222 . - . ID=gene48;Dbxref=EcoGene:EG10048,GeneID:944770;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;gene_synonym=cfcB,ECK0050,JW0048;locus_tag=b0049 NC_000913.3 RefSeq CDS 50380 51222 . - 0 ID=cds47;Parent=gene48;Dbxref=ASAP:ABE-0000167,UniProtKB/Swiss-Prot:P05637,Genbank:NP_414591.1,EcoGene:EG10048,GeneID:944770;Name=NP_414591.1;gbkey=CDS;gene=apaH;product=diadenosine tetraphosphatase;protein_id=NP_414591.1;transl_table=11 NC_000913.3 RefSeq gene 51229 51606 . - . ID=gene49;Dbxref=EcoGene:EG10047,GeneID:944772;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;gene_synonym=corD,ECK0051,JW0049,temP;locus_tag=b0050 NC_000913.3 RefSeq CDS 51229 51606 . - 0 ID=cds48;Parent=gene49;Dbxref=ASAP:ABE-0000169,UniProtKB/Swiss-Prot:P62672,Genbank:NP_414592.1,EcoGene:EG10047,GeneID:944772;Name=NP_414592.1;gbkey=CDS;gene=apaG;product=protein associated with Co2+ and Mg2+ efflux;protein_id=NP_414592.1;transl_table=11 NC_000913.3 RefSeq gene 51609 52430 . - . ID=gene50;Dbxref=EcoGene:EG10523,GeneID:944939;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;gene_synonym=ECK0052,JW0050,ksgA;locus_tag=b0051 NC_000913.3 RefSeq CDS 51609 52430 . - 0 ID=cds49;Parent=gene50;Dbxref=ASAP:ABE-0000175,UniProtKB/Swiss-Prot:P06992,Genbank:NP_414593.1,EcoGene:EG10523,GeneID:944939;Name=NP_414593.1;gbkey=CDS;gene=rsmA;product=16S rRNA m(6)A1518%2C m(6)A1519 dimethyltransferase%2C SAM-dependent;protein_id=NP_414593.1;transl_table=11 NC_000913.3 RefSeq gene 52427 53416 . - . ID=gene51;Dbxref=EcoGene:EG10691,GeneID:944919;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;gene_synonym=ECK0053,JW0051;locus_tag=b0052 NC_000913.3 RefSeq CDS 52427 53416 . - 0 ID=cds50;Parent=gene51;Dbxref=ASAP:ABE-0000178,UniProtKB/Swiss-Prot:P19624,Genbank:NP_414594.1,EcoGene:EG10691,GeneID:944919;Name=NP_414594.1;Note=pyridoxine biosynthesis;gbkey=CDS;gene=pdxA;product=4-hydroxy-L-threonine phosphate dehydrogenase%2C NAD-dependent;protein_id=NP_414594.1;transl_table=11 NC_000913.3 RefSeq gene 53416 54702 . - . ID=gene52;Dbxref=EcoGene:EG10985,GeneID:944812;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;gene_synonym=ECK0054,JW0052;locus_tag=b0053 NC_000913.3 RefSeq CDS 53416 54702 . - 0 ID=cds51;Parent=gene52;Dbxref=ASAP:ABE-0000180,UniProtKB/Swiss-Prot:P0ABZ6,Genbank:NP_414595.1,EcoGene:EG10985,GeneID:944812;Name=NP_414595.1;Note=survival protein;gbkey=CDS;gene=surA;product=peptidyl-prolyl cis-trans isomerase (PPIase);protein_id=NP_414595.1;transl_table=11 NC_000913.3 RefSeq gene 54755 57109 . - . ID=gene53;Dbxref=EcoGene:EG11569,GeneID:945011;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;gene_synonym=ECK0055,imp,JW0053,ostA,yabG;locus_tag=b0054 NC_000913.3 RefSeq CDS 54755 57109 . - 0 ID=cds52;Parent=gene53;Dbxref=ASAP:ABE-0000183,UniProtKB/Swiss-Prot:P31554,Genbank:NP_414596.1,EcoGene:EG11569,GeneID:945011;Name=NP_414596.1;Note=organic solvent tolerance;gbkey=CDS;gene=lptD;product=LPS assembly OM complex LptDE%2C beta-barrel component;protein_id=NP_414596.1;transl_table=11 NC_000913.3 RefSeq gene 57364 58179 . + . ID=gene54;Dbxref=EcoGene:EG11570,GeneID:948992;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;gene_synonym=ECK0056,JW0054,yabH;locus_tag=b0055 NC_000913.3 RefSeq CDS 57364 58179 . + 0 ID=cds53;Parent=gene54;Dbxref=ASAP:ABE-0000187,UniProtKB/Swiss-Prot:P31680,Genbank:NP_414597.1,EcoGene:EG11570,GeneID:948992;Name=NP_414597.1;gbkey=CDS;gene=djlA;product=membrane-anchored DnaK co-chaperone%2C DNA-binding protein;protein_id=NP_414597.1;transl_table=11 NC_000913.3 RefSeq gene 58474 59279 . + . ID=gene55;Dbxref=EcoGene:EG12610,GeneID:944776;Name=yabP;gbkey=Gene;gene=yabP;gene_biotype=pseudogene;gene_synonym=ECK0057,JW0055,yabQ;locus_tag=b4659;pseudo=true NC_000913.3 RefSeq CDS 58474 59052 . + 0 ID=cds54;Parent=gene55;Dbxref=ASAP:ABE-0000192,ASAP:ABE-0000194,UniProtKB/Swiss-Prot:P39220,EcoGene:EG12610,GeneID:944776;Note=pseudogene%2C pentapeptide repeats-containing;gbkey=CDS;gene=yabP;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 59052 59279 . + 0 ID=cds54;Parent=gene55;Dbxref=ASAP:ABE-0000192,ASAP:ABE-0000194,UniProtKB/Swiss-Prot:P39220,EcoGene:EG12610,GeneID:944776;Note=pseudogene%2C pentapeptide repeats-containing;gbkey=CDS;gene=yabP;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 59687 60346 . - . ID=gene56;Dbxref=EcoGene:EG12609,GeneID:946262;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;gene_synonym=ECK0059,JW0057,yabO;locus_tag=b0058 NC_000913.3 RefSeq CDS 59687 60346 . - 0 ID=cds55;Parent=gene56;Dbxref=ASAP:ABE-0000196,UniProtKB/Swiss-Prot:P0AA37,Genbank:NP_414600.1,EcoGene:EG12609,GeneID:946262;Name=NP_414600.1;gbkey=CDS;gene=rluA;product=dual specificity 23S rRNA pseudouridine(746)%2C tRNA pseudouridine(32) synthase%2C SAM-dependent;protein_id=NP_414600.1;transl_table=11 NC_000913.3 RefSeq gene 60358 63264 . - . ID=gene57;Dbxref=EcoGene:EG11083,GeneID:948523;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;gene_synonym=ECK0060,hepA,JW0058,yabA;locus_tag=b0059 NC_000913.3 RefSeq CDS 60358 63264 . - 0 ID=cds56;Parent=gene57;Dbxref=ASAP:ABE-0000198,UniProtKB/Swiss-Prot:P60240,Genbank:NP_414601.1,EcoGene:EG11083,GeneID:948523;Name=NP_414601.1;Note=probable ATP-dependent RNA helicase;gbkey=CDS;gene=rapA;product=RNA polymerase remodeling/recycling factor ATPase%3B RNA polymerase-associated%2C ATP-dependent RNA translocase;protein_id=NP_414601.1;transl_table=11 NC_000913.3 RefSeq gene 63429 65780 . - . ID=gene58;Dbxref=EcoGene:EG10747,GeneID:944779;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;gene_synonym=dinA,ECK0061,JW0059;locus_tag=b0060 NC_000913.3 RefSeq CDS 63429 65780 . - 0 ID=cds57;Parent=gene58;Dbxref=ASAP:ABE-0000202,UniProtKB/Swiss-Prot:P21189,Genbank:NP_414602.1,EcoGene:EG10747,GeneID:944779;Name=NP_414602.1;gbkey=CDS;gene=polB;product=DNA polymerase II;protein_id=NP_414602.1;transl_table=11 NC_000913.3 RefSeq gene 65855 66550 . - . ID=gene59;Dbxref=EcoGene:EG10055,GeneID:945294;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;gene_synonym=ECK0062,JW0060;locus_tag=b0061 NC_000913.3 RefSeq CDS 65855 66550 . - 0 ID=cds58;Parent=gene59;Dbxref=ASAP:ABE-0000209,UniProtKB/Swiss-Prot:P08203,Genbank:NP_414603.1,EcoGene:EG10055,GeneID:945294;Name=NP_414603.1;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=NP_414603.1;transl_table=11 NC_000913.3 RefSeq repeat_region 66565 66812 . + . ID=id9;Note=REP6 (repetitive extragenic palindromic) element%3B contains 6 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 66835 68337 . - . ID=gene60;Dbxref=EcoGene:EG10052,GeneID:947511;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;gene_synonym=ECK0063,JW0061;locus_tag=b0062 NC_000913.3 RefSeq CDS 66835 68337 . - 0 ID=cds59;Parent=gene60;Dbxref=ASAP:ABE-0000221,UniProtKB/Swiss-Prot:P08202,Genbank:NP_414604.1,EcoGene:EG10052,GeneID:947511;Name=NP_414604.1;gbkey=CDS;gene=araA;product=L-arabinose isomerase;protein_id=NP_414604.1;transl_table=11 NC_000913.3 RefSeq gene 68348 70048 . - . ID=gene61;Dbxref=EcoGene:EG10053,GeneID:946017;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;gene_synonym=ECK0064,JW0062;locus_tag=b0063 NC_000913.3 RefSeq CDS 68348 70048 . - 0 ID=cds60;Parent=gene61;Dbxref=ASAP:ABE-0000223,UniProtKB/Swiss-Prot:P08204,Genbank:NP_414605.1,EcoGene:EG10053,GeneID:946017;Name=NP_414605.1;gbkey=CDS;gene=araB;product=L-ribulokinase;protein_id=NP_414605.1;transl_table=11 NC_000913.3 RefSeq gene 70387 71265 . + . ID=gene62;Dbxref=EcoGene:EG10054,GeneID:944780;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;gene_synonym=ECK0065,JW0063;locus_tag=b0064 NC_000913.3 RefSeq CDS 70387 71265 . + 0 ID=cds61;Parent=gene62;Dbxref=ASAP:ABE-0000236,UniProtKB/Swiss-Prot:P0A9E0,Genbank:NP_414606.1,EcoGene:EG10054,GeneID:944780;Name=NP_414606.1;Note=transcriptional regulator for ara operon;gbkey=CDS;gene=araC;product=ara regulon transcriptional activator%3B autorepressor;protein_id=NP_414606.1;transl_table=11 NC_000913.3 RefSeq gene 71351 72115 . + . ID=gene63;Dbxref=EcoGene:EG11571,GeneID:944783;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;gene_synonym=ECK0066,JW5005;locus_tag=b0065 NC_000913.3 RefSeq CDS 71351 72115 . + 0 ID=cds62;Parent=gene63;Dbxref=ASAP:ABE-0000241,UniProtKB/Swiss-Prot:P30149,Genbank:NP_414607.1,EcoGene:EG11571,GeneID:944783;Name=NP_414607.1;gbkey=CDS;gene=yabI;product=DedA family inner membrane protein;protein_id=NP_414607.1;transl_table=11 NC_000913.3 RefSeq repeat_region 72136 72220 . + . ID=id10;Note=REP7 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 72229 72927 . - . ID=gene64;Dbxref=EcoGene:EG11572,GeneID:944785;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;gene_synonym=ECK0067,JW0065,sfuC,yabJ;locus_tag=b0066 NC_000913.3 RefSeq CDS 72229 72927 . - 0 ID=cds63;Parent=gene64;Dbxref=ASAP:ABE-0000244,UniProtKB/Swiss-Prot:P31548,Genbank:NP_414608.1,EcoGene:EG11572,GeneID:944785;Name=NP_414608.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=thiQ;product=thiamine/thiamine pyrophosphate ABC transporter ATPase;protein_id=NP_414608.1;transl_table=11 NC_000913.3 RefSeq gene 72911 74521 . - . ID=gene65;Dbxref=EcoGene:EG11573,GeneID:944784;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=ECK0068,JW0066,sfuB,yabK;locus_tag=b0067 NC_000913.3 RefSeq CDS 72911 74521 . - 0 ID=cds64;Parent=gene65;Dbxref=ASAP:ABE-0000246,UniProtKB/Swiss-Prot:P31549,Genbank:NP_414609.1,EcoGene:EG11573,GeneID:944784;Name=NP_414609.1;gbkey=CDS;gene=thiP;product=thiamine/thiamine pyrophosphate ABC transporter permease;protein_id=NP_414609.1;transl_table=11 NC_000913.3 RefSeq gene 74497 75480 . - . ID=gene66;Dbxref=EcoGene:EG11574,GeneID:946306;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;gene_synonym=ECK0069,JW0067,sfuA,tbpA,yabL;locus_tag=b0068 NC_000913.3 RefSeq CDS 74497 75480 . - 0 ID=cds65;Parent=gene66;Dbxref=ASAP:ABE-0000249,UniProtKB/Swiss-Prot:P31550,Genbank:NP_414610.1,EcoGene:EG11574,GeneID:946306;Name=NP_414610.1;Note=thiamin-binding periplasmic protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=thiB;product=thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein;protein_id=NP_414610.1;transl_table=11 NC_000913.3 RefSeq gene 75644 77299 . - . ID=gene67;Dbxref=EcoGene:EG12094,GeneID:944788;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;gene_synonym=ECK0070,JW0068,yabN;locus_tag=b0069 NC_000913.3 RefSeq CDS 75644 77299 . - 0 ID=cds66;Parent=gene67;Dbxref=ASAP:ABE-0000251,UniProtKB/Swiss-Prot:P33595,Genbank:NP_414611.1,EcoGene:EG12094,GeneID:944788;Name=NP_414611.1;Note=putative transport protein;gbkey=CDS;gene=sgrR;product=transcriptional DNA-binding transcriptional activator of sgrS sRNA;protein_id=NP_414611.1;transl_table=11 NC_000913.3 RefSeq gene 77367 77593 . + . ID=gene68;Dbxref=EcoGene:EG31149,GeneID:4056038;Name=sgrS;gbkey=Gene;gene=sgrS;gene_biotype=antisense_RNA;gene_synonym=ECK0071,JWR0259,ryaA;locus_tag=b4577 NC_000913.3 RefSeq ncRNA 77367 77593 . + . ID=rna1;Parent=gene68;Dbxref=ASAP:ABE-0285090,EcoGene:EG31149,GeneID:4056038;gbkey=ncRNA;gene=sgrS;ncrna_class=antisense_RNA;product=sRNA antisense regulator destabilzes ptsG mRNA%2C Hfq-dependent%3B regulated by sgrR NC_000913.3 RefSeq exon 77367 77593 . + . ID=id11;Parent=rna1;Dbxref=ASAP:ABE-0285090,EcoGene:EG31149,GeneID:4056038;gbkey=ncRNA;gene=sgrS;ncrna_class=antisense_RNA;product=sRNA antisense regulator destabilzes ptsG mRNA%2C Hfq-dependent%3B regulated by sgrR NC_000913.3 RefSeq gene 77388 77519 . + . ID=gene69;Dbxref=EcoGene:EG14467,GeneID:7751624;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;gene_synonym=ECK4477;locus_tag=b4662 NC_000913.3 RefSeq CDS 77388 77519 . + 0 ID=cds67;Parent=gene69;Dbxref=UniProtKB/Swiss-Prot:C1P5Z7,Genbank:YP_002791237.1,EcoGene:EG14467,GeneID:7751624;Name=YP_002791237.1;gbkey=CDS;gene=sgrT;product=inhibitor of glucose uptake;protein_id=YP_002791237.1;transl_table=11 NC_000913.3 RefSeq gene 77621 78799 . + . ID=gene70;Dbxref=EcoGene:EG11754,GeneID:944793;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;gene_synonym=ECK0072,JW0069,yabM;locus_tag=b0070 NC_000913.3 RefSeq CDS 77621 78799 . + 0 ID=cds68;Parent=gene70;Dbxref=ASAP:ABE-0000257,UniProtKB/Swiss-Prot:P31675,Genbank:YP_025293.1,EcoGene:EG11754,GeneID:944793;Name=YP_025293.1;gbkey=CDS;gene=setA;product=broad specificity sugar efflux system;protein_id=YP_025293.1;transl_table=11 NC_000913.3 RefSeq gene 78848 79453 . - . ID=gene71;Dbxref=EcoGene:EG11575,GeneID:945642;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;gene_synonym=ECK0073,JW0070;locus_tag=b0071 NC_000913.3 RefSeq CDS 78848 79453 . - 0 ID=cds69;Parent=gene71;Dbxref=ASAP:ABE-0000259,UniProtKB/Swiss-Prot:P30126,Genbank:NP_414613.1,EcoGene:EG11575,GeneID:945642;Name=NP_414613.1;Note=isopropylmalate isomerase subunit;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=NP_414613.1;transl_table=11 NC_000913.3 RefSeq gene 79464 80864 . - . ID=gene72;Dbxref=EcoGene:EG11576,GeneID:945076;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;gene_synonym=ECK0074,JW0071;locus_tag=b0072 NC_000913.3 RefSeq CDS 79464 80864 . - 0 ID=cds70;Parent=gene72;Dbxref=ASAP:ABE-0000261,UniProtKB/Swiss-Prot:P0A6A6,Genbank:NP_414614.1,EcoGene:EG11576,GeneID:945076;Name=NP_414614.1;Note=3-isopropylmalate isomerase (dehydratase) subunit;gbkey=CDS;gene=leuC;product=3-isopropylmalate dehydratase large subunit;protein_id=NP_414614.1;transl_table=11 NC_000913.3 RefSeq gene 80867 81958 . - . ID=gene73;Dbxref=EcoGene:EG11577,GeneID:944798;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;gene_synonym=ECK0075,JW5807;locus_tag=b0073 NC_000913.3 RefSeq CDS 80867 81958 . - 0 ID=cds71;Parent=gene73;Dbxref=ASAP:ABE-0000265,UniProtKB/Swiss-Prot:P30125,Genbank:NP_414615.4,EcoGene:EG11577,GeneID:944798;Name=NP_414615.4;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase%2C NAD(+)-dependent;protein_id=NP_414615.4;transl_table=11 NC_000913.3 RefSeq gene 81958 83529 . - . ID=gene74;Dbxref=EcoGene:EG11226,GeneID:947465;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;gene_synonym=ECK0076,JW0073;locus_tag=b0074 NC_000913.3 RefSeq CDS 81958 83529 . - 0 ID=cds72;Parent=gene74;Dbxref=ASAP:ABE-0000267,UniProtKB/Swiss-Prot:P09151,Genbank:NP_414616.1,EcoGene:EG11226,GeneID:947465;Name=NP_414616.1;gbkey=CDS;gene=leuA;product=2-isopropylmalate synthase;protein_id=NP_414616.1;transl_table=11 NC_000913.3 RefSeq gene 83622 83708 . - . ID=gene75;Dbxref=EcoGene:EG11280,GeneID:946072;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;gene_synonym=ECK0077,JW0074,leuLP;locus_tag=b0075 NC_000913.3 RefSeq CDS 83622 83708 . - 0 ID=cds73;Parent=gene75;Dbxref=ASAP:ABE-0000269,UniProtKB/Swiss-Prot:P0AD79,Genbank:NP_414617.1,EcoGene:EG11280,GeneID:946072;Name=NP_414617.1;gbkey=CDS;gene=leuL;product=leu operon leader peptide;protein_id=NP_414617.1;transl_table=11 NC_000913.3 RefSeq gene 84368 85312 . + . ID=gene76;Dbxref=EcoGene:EG10531,GeneID:949034;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;gene_synonym=ECK0078,JW0075;locus_tag=b0076 NC_000913.3 RefSeq CDS 84368 85312 . + 0 ID=cds74;Parent=gene76;Dbxref=ASAP:ABE-0000280,UniProtKB/Swiss-Prot:P10151,Genbank:NP_414618.4,EcoGene:EG10531,GeneID:949034;Name=NP_414618.4;Note=probable transcriptional activator for leuABCD operon;gbkey=CDS;gene=leuO;product=global transcription factor;protein_id=NP_414618.4;transl_table=11 NC_000913.3 RefSeq gene 85630 87354 . + . ID=gene77;Dbxref=EcoGene:EG10500,GeneID:948793;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;gene_synonym=ECK0079,JW0076;locus_tag=b0077 NC_000913.3 RefSeq CDS 85630 87354 . + 0 ID=cds75;Parent=gene77;Dbxref=ASAP:ABE-0000290,UniProtKB/Swiss-Prot:P00893,Genbank:YP_025294.2,EcoGene:EG10500,GeneID:948793;Name=YP_025294.2;Note=acetolactate synthase III%2C valine sensitive%2C large subunit;gbkey=CDS;gene=ilvI;product=acetolactate synthase 3 large subunit;protein_id=YP_025294.2;transl_table=11 NC_000913.3 RefSeq gene 87357 87848 . + . ID=gene78;Dbxref=EcoGene:EG10499,GeneID:947267;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;gene_synonym=brnP,ECK0080,JW0077;locus_tag=b0078 NC_000913.3 RefSeq CDS 87357 87848 . + 0 ID=cds76;Parent=gene78;Dbxref=ASAP:ABE-0000294,UniProtKB/Swiss-Prot:P00894,Genbank:NP_414620.1,EcoGene:EG10499,GeneID:947267;Name=NP_414620.1;Note=acetolactate synthase III%2C valine sensitive%2C small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase 3%2C small subunit%2C valine-sensitive;protein_id=NP_414620.1;transl_table=11 NC_000913.3 RefSeq gene 88028 89032 . + . ID=gene79;Dbxref=EcoGene:EG10338,GeneID:944804;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;gene_synonym=ECK0081,fruC,fruR,fruS?,JW0078,serR?,shl;locus_tag=b0080 NC_000913.3 RefSeq CDS 88028 89032 . + 0 ID=cds77;Parent=gene79;Dbxref=ASAP:ABE-0000299,UniProtKB/Swiss-Prot:P0ACP1,Genbank:NP_414622.1,EcoGene:EG10338,GeneID:944804;Name=NP_414622.1;Note=transcriptional repressor of fru operon and others;gbkey=CDS;gene=cra;product=transcriptional repressor-activator for carbon metabolism;protein_id=NP_414622.1;transl_table=11 NC_000913.3 RefSeq gene 89634 90092 . + . ID=gene80;Dbxref=EcoGene:EG11084,GeneID:944810;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;gene_synonym=ECK0082,JW0079,yabB;locus_tag=b0081 NC_000913.3 RefSeq CDS 89634 90092 . + 0 ID=cds78;Parent=gene80;Dbxref=ASAP:ABE-0000302,UniProtKB/Swiss-Prot:P22186,Genbank:NP_414623.1,EcoGene:EG11084,GeneID:944810;Name=NP_414623.1;gbkey=CDS;gene=mraZ;product=RsmH methytransferase inhibitor;protein_id=NP_414623.1;transl_table=11 NC_000913.3 RefSeq gene 90094 91035 . + . ID=gene81;Dbxref=EcoGene:EG11085,GeneID:944806;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;gene_synonym=ECK0083,JW0080,mraW,yabC;locus_tag=b0082 NC_000913.3 RefSeq CDS 90094 91035 . + 0 ID=cds79;Parent=gene81;Dbxref=ASAP:ABE-0000304,UniProtKB/Swiss-Prot:P60390,Genbank:NP_414624.1,EcoGene:EG11085,GeneID:944806;Name=NP_414624.1;Note=putative apolipoprotein;gbkey=CDS;gene=rsmH;product=16S rRNA m(4)C1402 methyltransferase%2C SAM-dependent;protein_id=NP_414624.1;transl_table=11 NC_000913.3 RefSeq gene 91032 91397 . + . ID=gene82;Dbxref=EcoGene:EG11086,GeneID:944803;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;gene_synonym=ECK0084,JW0081,mraR,yabD;locus_tag=b0083 NC_000913.3 RefSeq CDS 91032 91397 . + 0 ID=cds80;Parent=gene82;Dbxref=ASAP:ABE-0000306,UniProtKB/Swiss-Prot:P0AEN4,Genbank:NP_414625.1,EcoGene:EG11086,GeneID:944803;Name=NP_414625.1;Note=cell division protein%3B ingrowth of wall at septum;gbkey=CDS;gene=ftsL;product=membrane bound cell division leucine zipper septum protein;protein_id=NP_414625.1;transl_table=11 NC_000913.3 RefSeq gene 91413 93179 . + . ID=gene83;Dbxref=EcoGene:EG10341,GeneID:944799;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;gene_synonym=ECK0085,JW0082,pbpB,sep;locus_tag=b0084 NC_000913.3 RefSeq CDS 91413 93179 . + 0 ID=cds81;Parent=gene83;Dbxref=ASAP:ABE-0000309,UniProtKB/Swiss-Prot:P0AD68,Genbank:NP_414626.1,EcoGene:EG10341,GeneID:944799;Name=NP_414626.1;Note=septum formation%3B penicillin-binding protein 3%3B peptidoglycan synthetase;gbkey=CDS;gene=ftsI;product=transpeptidase involved in septal peptidoglycan synthesis%3B penicillin-binding protein 3;protein_id=NP_414626.1;transl_table=11 NC_000913.3 RefSeq gene 93166 94653 . + . ID=gene84;Dbxref=EcoGene:EG10621,GeneID:944791;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;gene_synonym=ECK0086,JW0083;locus_tag=b0085 NC_000913.3 RefSeq CDS 93166 94653 . + 0 ID=cds82;Parent=gene84;Dbxref=ASAP:ABE-0000311,UniProtKB/Swiss-Prot:P22188,Genbank:NP_414627.1,EcoGene:EG10621,GeneID:944791;Name=NP_414627.1;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase;protein_id=NP_414627.1;transl_table=11 NC_000913.3 RefSeq gene 94650 96008 . + . ID=gene85;Dbxref=EcoGene:EG10622,GeneID:944813;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;gene_synonym=ECK0087,JW0084,mra;locus_tag=b0086 NC_000913.3 RefSeq CDS 94650 96008 . + 0 ID=cds83;Parent=gene85;Dbxref=ASAP:ABE-0000313,UniProtKB/Swiss-Prot:P11880,Genbank:NP_414628.1,EcoGene:EG10622,GeneID:944813;Name=NP_414628.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase;protein_id=NP_414628.1;transl_table=11 NC_000913.3 RefSeq gene 96002 97084 . + . ID=gene86;Dbxref=EcoGene:EG10604,GeneID:944814;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;gene_synonym=ECK0088,JW0085,murX;locus_tag=b0087 NC_000913.3 RefSeq CDS 96002 97084 . + 0 ID=cds84;Parent=gene86;Dbxref=ASAP:ABE-0000316,UniProtKB/Swiss-Prot:P0A6W3,Genbank:NP_414629.1,EcoGene:EG10604,GeneID:944814;Name=NP_414629.1;Note=phospho-N-acetylmuramoyl-pentapeptide transferase?;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=NP_414629.1;transl_table=11 NC_000913.3 RefSeq gene 97087 98403 . + . ID=gene87;Dbxref=EcoGene:EG10620,GeneID:944818;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;gene_synonym=ECK0089,JW0086;locus_tag=b0088 NC_000913.3 RefSeq CDS 97087 98403 . + 0 ID=cds85;Parent=gene87;Dbxref=ASAP:ABE-0000318,UniProtKB/Swiss-Prot:P14900,Genbank:NP_414630.1,EcoGene:EG10620,GeneID:944818;Name=NP_414630.1;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;protein_id=NP_414630.1;transl_table=11 NC_000913.3 RefSeq gene 98403 99647 . + . ID=gene88;Dbxref=EcoGene:EG10344,GeneID:946322;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;gene_synonym=ECK0090,JW0087;locus_tag=b0089 NC_000913.3 RefSeq CDS 98403 99647 . + 0 ID=cds86;Parent=gene88;Dbxref=ASAP:ABE-0000320,UniProtKB/Swiss-Prot:P0ABG4,Genbank:NP_414631.1,EcoGene:EG10344,GeneID:946322;Name=NP_414631.1;Note=cell division%3B membrane protein involved in shape determination;gbkey=CDS;gene=ftsW;product=putative lipid II flippase%3B integral membrane protein%3B FtsZ ring stabilizer;protein_id=NP_414631.1;transl_table=11 NC_000913.3 RefSeq gene 99644 100711 . + . ID=gene89;Dbxref=EcoGene:EG10623,GeneID:946321;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;gene_synonym=ECK0091,JW0088;locus_tag=b0090 NC_000913.3 RefSeq CDS 99644 100711 . + 0 ID=cds87;Parent=gene89;Dbxref=ASAP:ABE-0000322,UniProtKB/Swiss-Prot:P17443,Genbank:NP_414632.1,EcoGene:EG10623,GeneID:946321;Name=NP_414632.1;gbkey=CDS;gene=murG;product=N-acetylglucosaminyl transferase;protein_id=NP_414632.1;transl_table=11 NC_000913.3 RefSeq gene 100765 102240 . + . ID=gene90;Dbxref=EcoGene:EG10619,GeneID:946153;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;gene_synonym=ECK0092,JW0089;locus_tag=b0091 NC_000913.3 RefSeq CDS 100765 102240 . + 0 ID=cds88;Parent=gene90;Dbxref=ASAP:ABE-0000324,UniProtKB/Swiss-Prot:P17952,Genbank:NP_414633.1,EcoGene:EG10619,GeneID:946153;Name=NP_414633.1;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate:L-alanine ligase;protein_id=NP_414633.1;transl_table=11 NC_000913.3 RefSeq gene 102233 103153 . + . ID=gene91;Dbxref=EcoGene:EG10214,GeneID:946324;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;gene_synonym=ddl,ECK0093,JW0090;locus_tag=b0092 NC_000913.3 RefSeq CDS 102233 103153 . + 0 ID=cds89;Parent=gene91;Dbxref=ASAP:ABE-0000326,UniProtKB/Swiss-Prot:P07862,Genbank:NP_414634.1,EcoGene:EG10214,GeneID:946324;Name=NP_414634.1;Note=D-alanine-D-alanine ligase B%2C affects cell division;gbkey=CDS;gene=ddlB;product=D-alanine:D-alanine ligase;protein_id=NP_414634.1;transl_table=11 NC_000913.3 RefSeq gene 103155 103985 . + . ID=gene92;Dbxref=EcoGene:EG10342,GeneID:944823;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;gene_synonym=ECK0094,JW0091;locus_tag=b0093 NC_000913.3 RefSeq CDS 103155 103985 . + 0 ID=cds90;Parent=gene92;Dbxref=ASAP:ABE-0000329,UniProtKB/Swiss-Prot:P06136,Genbank:NP_414635.1,EcoGene:EG10342,GeneID:944823;Name=NP_414635.1;Note=cell division protein%3B ingrowth of wall at septum;gbkey=CDS;gene=ftsQ;product=divisome assembly protein%2C membrane anchored protein involved in growth of wall at septum;protein_id=NP_414635.1;transl_table=11 NC_000913.3 RefSeq gene 103982 105244 . + . ID=gene93;Dbxref=EcoGene:EG10339,GeneID:944778;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;gene_synonym=divA,ECK0095,JW0092;locus_tag=b0094 NC_000913.3 RefSeq CDS 103982 105244 . + 0 ID=cds91;Parent=gene93;Dbxref=ASAP:ABE-0000331,UniProtKB/Swiss-Prot:P0ABH0,Genbank:NP_414636.1,EcoGene:EG10339,GeneID:944778;Name=NP_414636.1;Note=ATP-binding cell division protein%2C septation process%2C complexes with FtsZ%2C associated with junctions of inner and outer membranes;gbkey=CDS;gene=ftsA;product=ATP-binding cell division FtsK recruitment protein;protein_id=NP_414636.1;transl_table=11 NC_000913.3 RefSeq gene 105305 106456 . + . ID=gene94;Dbxref=EcoGene:EG10347,GeneID:944786;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;gene_synonym=ECK0096,JW0093,sfiB,sulB;locus_tag=b0095 NC_000913.3 RefSeq CDS 105305 106456 . + 0 ID=cds92;Parent=gene94;Dbxref=ASAP:ABE-0000333,UniProtKB/Swiss-Prot:P0A9A6,Genbank:NP_414637.1,EcoGene:EG10347,GeneID:944786;Name=NP_414637.1;Note=cell division%3B forms circumferential ring%3B tubulin-like GTP-binding protein and GTPase;gbkey=CDS;gene=ftsZ;product=GTP-binding tubulin-like cell division protein;protein_id=NP_414637.1;transl_table=11 NC_000913.3 RefSeq gene 106557 107474 . + . ID=gene95;Dbxref=EcoGene:EG10265,GeneID:944816;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;gene_synonym=asmB,ECK0097,envA,JW0094;locus_tag=b0096 NC_000913.3 RefSeq CDS 106557 107474 . + 0 ID=cds93;Parent=gene95;Dbxref=ASAP:ABE-0000336,UniProtKB/Swiss-Prot:P0A725,Genbank:NP_414638.1,EcoGene:EG10265,GeneID:944816;Name=NP_414638.1;Note=UDP-3-O-acyl N-acetylglucosamine deacetylase%3B lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-acyl N-acetylglucosamine deacetylase;protein_id=NP_414638.1;transl_table=11 NC_000913.3 RefSeq gene 107705 108217 . + . ID=gene96;Dbxref=EcoGene:EG11087,GeneID:944831;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;gene_synonym=ECK0098,JW5007,srrA,yacA;locus_tag=b0097 NC_000913.3 RefSeq CDS 107705 108217 . + 0 ID=cds94;Parent=gene96;Dbxref=ASAP:ABE-0000340,UniProtKB/Swiss-Prot:P62395,Genbank:NP_414639.2,EcoGene:EG11087,GeneID:944831;Name=NP_414639.2;gbkey=CDS;gene=secM;product=regulator of secA translation;protein_id=NP_414639.2;transl_table=11 NC_000913.3 RefSeq gene 108279 110984 . + . ID=gene97;Dbxref=EcoGene:EG10936,GeneID:944821;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,ECK0099,JW0096,pea,prlD;locus_tag=b0098 NC_000913.3 RefSeq CDS 108279 110984 . + 0 ID=cds95;Parent=gene97;Dbxref=ASAP:ABE-0000343,UniProtKB/Swiss-Prot:P10408,Genbank:NP_414640.1,EcoGene:EG10936,GeneID:944821;Name=NP_414640.1;Note=preprotein translocase%3B secretion protein;gbkey=CDS;gene=secA;product=preprotein translocase subunit%2C ATPase;protein_id=NP_414640.1;transl_table=11 NC_000913.3 RefSeq gene 111044 111433 . + . ID=gene98;Dbxref=EcoGene:EG10626,GeneID:944824;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;gene_synonym=ECK0100,JW0097,nudA;locus_tag=b0099 NC_000913.3 RefSeq CDS 111044 111433 . + 0 ID=cds96;Parent=gene98;Dbxref=ASAP:ABE-0000346,UniProtKB/Swiss-Prot:P08337,Genbank:NP_414641.1,EcoGene:EG10626,GeneID:944824;Name=NP_414641.1;Note=7%2C8-dihydro-8-oxoguanine-triphosphatase%2C prefers dGTP%2C causes AT-GC transversions;gbkey=CDS;gene=mutT;product=dGTP-preferring nucleoside triphosphate pyrophosphohydrolase;protein_id=NP_414641.1;transl_table=11 NC_000913.3 RefSeq repeat_region 111430 111629 . + . ID=id12;Note=RIP8 (repetitive extragenic palindromic) element%3B contains 4 REP sequences and 1 IHF site;gbkey=repeat_region;gene=mutT NC_000913.3 RefSeq gene 111649 111846 . - . ID=gene99;Dbxref=EcoGene:EG12314,GeneID:945630;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;gene_synonym=ECK0101,JW5008;locus_tag=b0101 NC_000913.3 RefSeq CDS 111649 111846 . - 0 ID=cds97;Parent=gene99;Dbxref=ASAP:ABE-0000351,UniProtKB/Swiss-Prot:P0A8H8,Genbank:NP_414643.1,EcoGene:EG12314,GeneID:945630;Name=NP_414643.1;gbkey=CDS;gene=yacG;product=DNA gyrase inhibitor;protein_id=NP_414643.1;transl_table=11 NC_000913.3 RefSeq gene 111856 112599 . - . ID=gene100;Dbxref=EcoGene:EG12313,GeneID:944873;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;gene_synonym=ECK0102,JW0099,yacF;locus_tag=b0102 NC_000913.3 RefSeq CDS 111856 112599 . - 0 ID=cds98;Parent=gene100;Dbxref=ASAP:ABE-0000355,UniProtKB/Swiss-Prot:P36680,Genbank:NP_414644.1,EcoGene:EG12313,GeneID:944873;Name=NP_414644.1;gbkey=CDS;gene=zapD;product=FtsZ stabilizer;protein_id=NP_414644.1;transl_table=11 NC_000913.3 RefSeq gene 112599 113219 . - . ID=gene101;Dbxref=EcoGene:EG12312,GeneID:949060;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;gene_synonym=ECK0103,JW0100,yacE;locus_tag=b0103 NC_000913.3 RefSeq CDS 112599 113219 . - 0 ID=cds99;Parent=gene101;Dbxref=ASAP:ABE-0000357,UniProtKB/Swiss-Prot:P0A6I9,Genbank:NP_414645.1,EcoGene:EG12312,GeneID:949060;Name=NP_414645.1;Note=putative DNA repair protein;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=NP_414645.1;transl_table=11 NC_000913.3 RefSeq gene 113444 114487 . + . ID=gene102;Dbxref=EcoGene:EG10422,GeneID:948986;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;gene_synonym=ECK0104,JW0101;locus_tag=b0104 NC_000913.3 RefSeq CDS 113444 114487 . + 0 ID=cds100;Parent=gene102;Dbxref=ASAP:ABE-0000362,UniProtKB/Swiss-Prot:P60560,Genbank:NP_414646.1,EcoGene:EG10422,GeneID:948986;Name=NP_414646.1;gbkey=CDS;gene=guaC;product=GMP reductase;protein_id=NP_414646.1;transl_table=11 NC_000913.3 RefSeq gene 114522 115724 . - . ID=gene103;Dbxref=EcoGene:EG11798,GeneID:945806;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;gene_synonym=ECK0105,hopC,JW0102,yacD;locus_tag=b0106 NC_000913.3 RefSeq CDS 114522 115724 . - 0 ID=cds101;Parent=gene103;Dbxref=ASAP:ABE-0000366,UniProtKB/Swiss-Prot:P36646,Genbank:NP_414648.1,EcoGene:EG11798,GeneID:945806;Name=NP_414648.1;Note=putative integral membrane protein involved in biogenesis of fimbriae%2C protein transport%2C DNA uptake;gbkey=CDS;gene=hofC;product=assembly protein in type IV pilin biogenesis%2C transmembrane protein;protein_id=NP_414648.1;transl_table=11 NC_000913.3 RefSeq gene 115714 117099 . - . ID=gene104;Dbxref=EcoGene:EG12106,GeneID:947481;Name=hofB;gbkey=Gene;gene=hofB;gene_biotype=protein_coding;gene_synonym=ECK0106,hopB,JW0103;locus_tag=b0107 NC_000913.3 RefSeq CDS 115714 117099 . - 0 ID=cds102;Parent=gene104;Dbxref=ASAP:ABE-0000370,UniProtKB/Swiss-Prot:P36645,Genbank:NP_414649.1,EcoGene:EG12106,GeneID:947481;Name=NP_414649.1;Note=putative integral membrane protein involved in biogenesis of fimbriae%2C protein transport%2C DNA uptake;gbkey=CDS;gene=hofB;product=T2SE secretion family protein%3B P-loop ATPase superfamily protein;protein_id=NP_414649.1;transl_table=11 NC_000913.3 RefSeq gene 117109 117549 . - . ID=gene105;Dbxref=EcoGene:EG12107,GeneID:945817;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;gene_synonym=ECK0107,JW0104;locus_tag=b0108 NC_000913.3 RefSeq CDS 117109 117549 . - 0 ID=cds103;Parent=gene105;Dbxref=ASAP:ABE-0000372,UniProtKB/Swiss-Prot:P36647,Genbank:NP_414650.1,EcoGene:EG12107,GeneID:945817;Name=NP_414650.1;Note=prelipin peptidase dependent protein;gbkey=CDS;gene=ppdD;product=putative prepilin peptidase-dependent pilin;protein_id=NP_414650.1;transl_table=11 NC_000913.3 RefSeq gene 117752 118645 . - . ID=gene106;Dbxref=EcoGene:EG11546,GeneID:948869;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;gene_synonym=ECK0108,JW0105;locus_tag=b0109 NC_000913.3 RefSeq CDS 117752 118645 . - 0 ID=cds104;Parent=gene106;Dbxref=ASAP:ABE-0000374,UniProtKB/Swiss-Prot:P30011,Genbank:NP_414651.1,EcoGene:EG11546,GeneID:948869;Name=NP_414651.1;gbkey=CDS;gene=nadC;product=quinolinate phosphoribosyltransferase;protein_id=NP_414651.1;transl_table=11 NC_000913.3 RefSeq gene 118733 119284 . + . ID=gene107;Dbxref=EcoGene:EG10041,GeneID:948877;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;gene_synonym=ECK0109,JW0106;locus_tag=b0110 NC_000913.3 RefSeq CDS 118733 119284 . + 0 ID=cds105;Parent=gene107;Dbxref=ASAP:ABE-0000380,UniProtKB/Swiss-Prot:P13016,Genbank:NP_414652.1,EcoGene:EG10041,GeneID:948877;Name=NP_414652.1;Note=regulates ampC;gbkey=CDS;gene=ampD;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase%2C Zn-dependent%3B murein amidase;protein_id=NP_414652.1;transl_table=11 NC_000913.3 RefSeq gene 119281 120135 . + . ID=gene108;Dbxref=EcoGene:EG10042,GeneID:946678;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;gene_synonym=ECK0110,JW0107;locus_tag=b0111 NC_000913.3 RefSeq CDS 119281 120135 . + 0 ID=cds106;Parent=gene108;Dbxref=ASAP:ABE-0000382,UniProtKB/Swiss-Prot:P0AE14,Genbank:NP_414653.1,EcoGene:EG10042,GeneID:946678;Name=NP_414653.1;Note=regulates ampC;gbkey=CDS;gene=ampE;product=ampicillin resistance inner membrane protein%3B putative signaling protein in beta-lactamase regulation;protein_id=NP_414653.1;transl_table=11 NC_000913.3 RefSeq gene 120178 121551 . - . ID=gene109;Dbxref=EcoGene:EG10084,GeneID:946018;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;gene_synonym=ECK0111,JW0108;locus_tag=b0112 NC_000913.3 RefSeq CDS 120178 121551 . - 0 ID=cds107;Parent=gene109;Dbxref=ASAP:ABE-0000384,UniProtKB/Swiss-Prot:P15993,Genbank:NP_414654.1,EcoGene:EG10084,GeneID:946018;Name=NP_414654.1;Note=aromatic amino acid transport protein;gbkey=CDS;gene=aroP;product=aromatic amino acid transporter;protein_id=NP_414654.1;transl_table=11 NC_000913.3 RefSeq gene 122092 122856 . + . ID=gene110;Dbxref=EcoGene:EG11088,GeneID:944827;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;gene_synonym=aceC,ECK0112,genA,JW0109,yacB;locus_tag=b0113 NC_000913.3 RefSeq CDS 122092 122856 . + 0 ID=cds108;Parent=gene110;Dbxref=ASAP:ABE-0000394,UniProtKB/Swiss-Prot:P0ACL9,Genbank:NP_414655.1,EcoGene:EG11088,GeneID:944827;Name=NP_414655.1;Note=transcriptional regulator for pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=pyruvate dehydrogenase complex repressor%3B autorepressor;protein_id=NP_414655.1;transl_table=11 NC_000913.3 RefSeq gene 123017 125680 . + . ID=gene111;Dbxref=EcoGene:EG10024,GeneID:944834;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;gene_synonym=ECK0113,JW0110;locus_tag=b0114 NC_000913.3 RefSeq CDS 123017 125680 . + 0 ID=cds109;Parent=gene111;Dbxref=ASAP:ABE-0000397,UniProtKB/Swiss-Prot:P0AFG8,Genbank:NP_414656.1,EcoGene:EG10024,GeneID:944834;Name=NP_414656.1;Note=pyruvate dehydrogenase (decarboxylase component);gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase%2C decarboxylase component E1%2C thiamine triphosphate-binding;protein_id=NP_414656.1;transl_table=11 NC_000913.3 RefSeq gene 125695 127587 . + . ID=gene112;Dbxref=EcoGene:EG10025,GeneID:944794;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;gene_synonym=ECK0114,JW0111;locus_tag=b0115 NC_000913.3 RefSeq CDS 125695 127587 . + 0 ID=cds110;Parent=gene112;Dbxref=ASAP:ABE-0000400,UniProtKB/Swiss-Prot:P06959,Genbank:NP_414657.1,EcoGene:EG10025,GeneID:944794;Name=NP_414657.1;Note=pyruvate dehydrogenase (dihydrolipoyltransacetylase component);gbkey=CDS;gene=aceF;product=pyruvate dehydrogenase%2C dihydrolipoyltransacetylase component E2;protein_id=NP_414657.1;transl_table=11 NC_000913.3 RefSeq gene 127912 129336 . + . ID=gene113;Dbxref=EcoGene:EG10543,GeneID:944854;Name=lpd;gbkey=Gene;gene=lpd;gene_biotype=protein_coding;gene_synonym=dhl,ECK0115,JW0112,lpdA;locus_tag=b0116 NC_000913.3 RefSeq CDS 127912 129336 . + 0 ID=cds111;Parent=gene113;Dbxref=ASAP:ABE-0000404,UniProtKB/Swiss-Prot:P0A9P0,Genbank:NP_414658.1,EcoGene:EG10543,GeneID:944854;Name=NP_414658.1;Note=lipoamide dehydrogenase (NADH)%3B component of 2-oxodehydrogenase and pyruvate complexes%3B L-protein of glycine cleavage complex;gbkey=CDS;gene=lpd;product=dihydrolipoyl dehydrogenase%3B E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes%3B glycine cleavage system L protein%3B dihydrolipoamide dehydrogenase;protein_id=NP_414658.1;transl_table=11 NC_000913.3 RefSeq repeat_region 129347 129361 . + . ID=id13;Note=REP9 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 129407 131260 . - . ID=gene114;Dbxref=EcoGene:EG12315,GeneID:944868;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;gene_synonym=ECK0116,JW0113;locus_tag=b0117 NC_000913.3 RefSeq CDS 129407 131260 . - 0 ID=cds112;Parent=gene114;Dbxref=ASAP:ABE-0000406,UniProtKB/Swiss-Prot:P36682,Genbank:NP_414659.1,EcoGene:EG12315,GeneID:944868;Name=NP_414659.1;Note=putative membrane protein;gbkey=CDS;gene=yacH;product=DUF3300 family protein;protein_id=NP_414659.1;transl_table=11 NC_000913.3 RefSeq gene 131615 134212 . + . ID=gene115;Dbxref=EcoGene:EG12316,GeneID:944864;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;gene_synonym=ECK0117,JW0114,yacI,yacJ;locus_tag=b0118 NC_000913.3 RefSeq CDS 131615 134212 . + 0 ID=cds113;Parent=gene115;Dbxref=ASAP:ABE-0000411,UniProtKB/Swiss-Prot:P36683,Genbank:NP_414660.1,EcoGene:EG12316,GeneID:944864;Name=NP_414660.1;Note=aconitate hydrase B;gbkey=CDS;gene=acnB;product=aconitate hydratase 2%3B aconitase B%3B 2-methyl-cis-aconitate hydratase;protein_id=NP_414660.1;transl_table=11 NC_000913.3 RefSeq gene 134388 134750 . + . ID=gene116;Dbxref=EcoGene:EG12605,GeneID:944809;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;gene_synonym=ECK0118,JW0115;locus_tag=b0119 NC_000913.3 RefSeq CDS 134388 134750 . + 0 ID=cds114;Parent=gene116;Dbxref=ASAP:ABE-0000414,UniProtKB/Swiss-Prot:P0A8E5,Genbank:NP_414661.2,EcoGene:EG12605,GeneID:944809;Name=NP_414661.2;gbkey=CDS;gene=yacL;product=UPF0231 family protein;protein_id=NP_414661.2;transl_table=11 NC_000913.3 RefSeq gene 134788 135582 . - . ID=gene117;Dbxref=EcoGene:EG10962,GeneID:947719;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;gene_synonym=ECK0119,JW0116;locus_tag=b0120 NC_000913.3 RefSeq CDS 134788 135582 . - 0 ID=cds115;Parent=gene117;Dbxref=ASAP:ABE-0000416,UniProtKB/Swiss-Prot:P0A7F6,Genbank:NP_414662.1,EcoGene:EG10962,GeneID:947719;Name=NP_414662.1;gbkey=CDS;gene=speD;product=S-adenosylmethionine decarboxylase;protein_id=NP_414662.1;transl_table=11 NC_000913.3 RefSeq gene 135598 136464 . - . ID=gene118;Dbxref=EcoGene:EG10963,GeneID:947726;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;gene_synonym=ECK0120,JW0117;locus_tag=b0121 NC_000913.3 RefSeq CDS 135598 136464 . - 0 ID=cds116;Parent=gene118;Dbxref=ASAP:ABE-0000418,UniProtKB/Swiss-Prot:P09158,Genbank:NP_414663.1,EcoGene:EG10963,GeneID:947726;Name=NP_414663.1;Note=spermidine synthase %3D putrescine aminopropyltransferase;gbkey=CDS;gene=speE;product=spermidine synthase (putrescine aminopropyltransferase);protein_id=NP_414663.1;transl_table=11 NC_000913.3 RefSeq gene 136570 136917 . - . ID=gene119;Dbxref=EcoGene:EG11089,GeneID:948472;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;gene_synonym=ECK0121,gspS,JW0118;locus_tag=b0122 NC_000913.3 RefSeq CDS 136570 136917 . - 0 ID=cds117;Parent=gene119;Dbxref=ASAP:ABE-0000423,UniProtKB/Swiss-Prot:P0AA95,Genbank:NP_414664.4,EcoGene:EG11089,GeneID:948472;Name=NP_414664.4;gbkey=CDS;gene=yacC;product=PulS_OutS family protein;protein_id=NP_414664.4;transl_table=11 NC_000913.3 RefSeq gene 137083 138633 . + . ID=gene120;Dbxref=EcoGene:EG12318,GeneID:947736;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;gene_synonym=cuiD,ECK0122,JW0119,yacK;locus_tag=b0123 NC_000913.3 RefSeq CDS 137083 138633 . + 0 ID=cds118;Parent=gene120;Dbxref=ASAP:ABE-0000430,UniProtKB/Swiss-Prot:P36649,Genbank:NP_414665.1,EcoGene:EG12318,GeneID:947736;Name=NP_414665.1;gbkey=CDS;gene=cueO;product=multicopper oxidase (laccase);protein_id=NP_414665.1;transl_table=11 NC_000913.3 RefSeq repeat_region 138699 138796 . + . ID=id14;Note=RIP10 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 138835 141225 . - . ID=gene121;Dbxref=EcoGene:EG10369,GeneID:944830;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;gene_synonym=ECK0123,JW0120;locus_tag=b0124 NC_000913.3 RefSeq CDS 138835 141225 . - 0 ID=cds119;Parent=gene121;Dbxref=ASAP:ABE-0000433,UniProtKB/Swiss-Prot:P15877,Genbank:NP_414666.1,EcoGene:EG10369,GeneID:944830;Name=NP_414666.1;gbkey=CDS;gene=gcd;product=glucose dehydrogenase;protein_id=NP_414666.1;transl_table=11 NC_000913.3 RefSeq gene 141431 141967 . + . ID=gene122;Dbxref=EcoGene:EG20098,GeneID:946624;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;gene_synonym=ECK0124,JW5009;locus_tag=b0125 NC_000913.3 RefSeq CDS 141431 141967 . + 0 ID=cds120;Parent=gene122;Dbxref=ASAP:ABE-0000440,UniProtKB/Swiss-Prot:P0A9M2,Genbank:NP_414667.4,EcoGene:EG20098,GeneID:946624;Name=NP_414667.4;gbkey=CDS;gene=hpt;product=hypoxanthine phosphoribosyltransferase;protein_id=NP_414667.4;transl_table=11 NC_000913.3 RefSeq repeat_region 141978 141998 . + . ID=id15;Note=REP11 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 142008 142670 . - . ID=gene123;Dbxref=EcoGene:EG12319,GeneID:944832;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;gene_synonym=ECK0125,JW0122,yadF;locus_tag=b0126 NC_000913.3 RefSeq CDS 142008 142670 . - 0 ID=cds121;Parent=gene123;Dbxref=ASAP:ABE-0000442,UniProtKB/Swiss-Prot:P61517,Genbank:NP_414668.1,EcoGene:EG12319,GeneID:944832;Name=NP_414668.1;Note=putative carbonic anhdrase;gbkey=CDS;gene=can;product=carbonic anhydrase;protein_id=NP_414668.1;transl_table=11 NC_000913.3 RefSeq gene 142779 143705 . + . ID=gene124;Dbxref=EcoGene:EG12320,GeneID:944833;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;gene_synonym=ECK0126,JW0123;locus_tag=b0127 NC_000913.3 RefSeq CDS 142779 143705 . + 0 ID=cds122;Parent=gene124;Dbxref=ASAP:ABE-0000447,UniProtKB/Swiss-Prot:P36879,Genbank:NP_414669.1,EcoGene:EG12320,GeneID:944833;Name=NP_414669.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yadG;product=putative ABC transporter ATPase;protein_id=NP_414669.1;transl_table=11 NC_000913.3 RefSeq gene 143702 144472 . + . ID=gene125;Dbxref=EcoGene:EG12321,GeneID:944836;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;gene_synonym=ECK0127,JW0124;locus_tag=b0128 NC_000913.3 RefSeq CDS 143702 144472 . + 0 ID=cds123;Parent=gene125;Dbxref=ASAP:ABE-0000450,UniProtKB/Swiss-Prot:P0AFN6,Genbank:NP_414670.1,EcoGene:EG12321,GeneID:944836;Name=NP_414670.1;gbkey=CDS;gene=yadH;product=putative ABC transporter permease;protein_id=NP_414670.1;transl_table=11 NC_000913.3 RefSeq gene 144577 145017 . + . ID=gene126;Dbxref=EcoGene:EG12322,GeneID:947397;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;gene_synonym=agaX,ECK0128,JW0125;locus_tag=b0129 NC_000913.3 RefSeq CDS 144577 145017 . + 0 ID=cds124;Parent=gene126;Dbxref=ASAP:ABE-0000453,UniProtKB/Swiss-Prot:P36881,Genbank:NP_414671.1,EcoGene:EG12322,GeneID:947397;Name=NP_414671.1;Note=putative PTS enzyme II B component;gbkey=CDS;gene=yadI;product=putative PTS Enzyme IIA;protein_id=NP_414671.1;transl_table=11 NC_000913.3 RefSeq gene 145081 146310 . + . ID=gene127;Dbxref=EcoGene:EG11749,GeneID:946536;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;gene_synonym=ECK0129,JW0126;locus_tag=b0130 NC_000913.3 RefSeq CDS 145081 146310 . + 0 ID=cds125;Parent=gene127;Dbxref=ASAP:ABE-0000457,UniProtKB/Swiss-Prot:P31666,Genbank:NP_414672.1,EcoGene:EG11749,GeneID:946536;Name=NP_414672.1;Note=conserved hypothetical protein;gbkey=CDS;gene=yadE;product=putative polysaccharide deacetylase lipoprotein;protein_id=NP_414672.1;transl_table=11 NC_000913.3 RefSeq gene 146314 146694 . - . ID=gene128;Dbxref=EcoGene:EG11747,GeneID:945686;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;gene_synonym=ECK0130,JW0127;locus_tag=b0131 NC_000913.3 RefSeq CDS 146314 146694 . - 0 ID=cds126;Parent=gene128;Dbxref=ASAP:ABE-0000459,UniProtKB/Swiss-Prot:P0A790,Genbank:NP_414673.1,EcoGene:EG11747,GeneID:945686;Name=NP_414673.1;gbkey=CDS;gene=panD;product=aspartate 1-decarboxylase;protein_id=NP_414673.1;transl_table=11 NC_000913.3 RefSeq gene 146968 147870 . + . ID=gene129;Dbxref=EcoGene:EG11748,GeneID:944781;Name=yadD;gbkey=Gene;gene=yadD;gene_biotype=protein_coding;gene_synonym=ECK0131,JW5010;locus_tag=b0132 NC_000913.3 RefSeq CDS 146968 147870 . + 0 ID=cds127;Parent=gene129;Dbxref=ASAP:ABE-0000463,UniProtKB/Swiss-Prot:P31665,Genbank:NP_414674.1,EcoGene:EG11748,GeneID:944781;Name=NP_414674.1;gbkey=CDS;gene=yadD;product=transposase_31 family protein;protein_id=NP_414674.1;transl_table=11 NC_000913.3 RefSeq gene 147944 148795 . - . ID=gene130;Dbxref=EcoGene:EG11746,GeneID:944958;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;gene_synonym=ECK0132,JW0129;locus_tag=b0133 NC_000913.3 RefSeq CDS 147944 148795 . - 0 ID=cds128;Parent=gene130;Dbxref=ASAP:ABE-0000465,UniProtKB/Swiss-Prot:P31663,Genbank:NP_414675.1,EcoGene:EG11746,GeneID:944958;Name=NP_414675.1;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=NP_414675.1;transl_table=11 NC_000913.3 RefSeq gene 148807 149601 . - . ID=gene131;Dbxref=EcoGene:EG11675,GeneID:944839;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;gene_synonym=ECK0133,JW0130,panA;locus_tag=b0134 NC_000913.3 RefSeq CDS 148807 149601 . - 0 ID=cds129;Parent=gene131;Dbxref=ASAP:ABE-0000467,UniProtKB/Swiss-Prot:P31057,Genbank:NP_414676.1,EcoGene:EG11675,GeneID:944839;Name=NP_414676.1;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=NP_414676.1;transl_table=11 NC_000913.3 RefSeq gene 149715 150953 . - . ID=gene132;Dbxref=EcoGene:EG11678,GeneID:944837;Name=yadC;gbkey=Gene;gene=yadC;gene_biotype=protein_coding;gene_synonym=ECK0134,JW0131;locus_tag=b0135 NC_000913.3 RefSeq CDS 149715 150953 . - 0 ID=cds130;Parent=gene132;Dbxref=ASAP:ABE-0000470,UniProtKB/Swiss-Prot:P31058,Genbank:NP_414677.1,EcoGene:EG11678,GeneID:944837;Name=NP_414677.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=yadC;product=putative fimbrial-like adhesin protein;protein_id=NP_414677.1;transl_table=11 NC_000913.3 RefSeq gene 151003 151599 . - . ID=gene133;Dbxref=EcoGene:EG12325,GeneID:944835;Name=yadK;gbkey=Gene;gene=yadK;gene_biotype=protein_coding;gene_synonym=ECK0135,JW0132;locus_tag=b0136 NC_000913.3 RefSeq CDS 151003 151599 . - 0 ID=cds131;Parent=gene133;Dbxref=ASAP:ABE-0000472,UniProtKB/Swiss-Prot:P37016,Genbank:NP_414678.1,EcoGene:EG12325,GeneID:944835;Name=NP_414678.1;Note=putative fimbrial protein;gbkey=CDS;gene=yadK;product=putative fimbrial-like adhesin protein;protein_id=NP_414678.1;transl_table=11 NC_000913.3 RefSeq gene 151626 152231 . - . ID=gene134;Dbxref=EcoGene:EG12326,GeneID:944829;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;gene_synonym=ECK0136,JW0133;locus_tag=b0137 NC_000913.3 RefSeq CDS 151626 152231 . - 0 ID=cds132;Parent=gene134;Dbxref=ASAP:ABE-0000475,UniProtKB/Swiss-Prot:P37017,Genbank:NP_414679.1,EcoGene:EG12326,GeneID:944829;Name=NP_414679.1;Note=putative fimbrial protein;gbkey=CDS;gene=yadL;product=putative fimbrial-like adhesin protein;protein_id=NP_414679.1;transl_table=11 NC_000913.3 RefSeq gene 152243 152812 . - . ID=gene135;Dbxref=EcoGene:EG12327,GeneID:944828;Name=yadM;gbkey=Gene;gene=yadM;gene_biotype=protein_coding;gene_synonym=ECK0137,JW0134;locus_tag=b0138 NC_000913.3 RefSeq CDS 152243 152812 . - 0 ID=cds133;Parent=gene135;Dbxref=ASAP:ABE-0000477,UniProtKB/Swiss-Prot:P37018,Genbank:NP_414680.4,EcoGene:EG12327,GeneID:944828;Name=NP_414680.4;Note=putative fimbrial-like protein;gbkey=CDS;gene=yadM;product=putative fimbrial-like adhesin protein;protein_id=NP_414680.4;transl_table=11 NC_000913.3 RefSeq gene 152829 155426 . - . ID=gene136;Dbxref=EcoGene:EG11972,GeneID:944819;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;gene_synonym=ECK0138,JW0135;locus_tag=b0139 NC_000913.3 RefSeq CDS 152829 155426 . - 0 ID=cds134;Parent=gene136;Dbxref=ASAP:ABE-0000479,UniProtKB/Swiss-Prot:P33129,Genbank:NP_414681.1,EcoGene:EG11972,GeneID:944819;Name=NP_414681.1;Note=probable outer membrane porin protein involved in fimbrial assembly;gbkey=CDS;gene=htrE;product=putative outer membrane usher protein;protein_id=NP_414681.1;transl_table=11 NC_000913.3 RefSeq gene 155461 156201 . - . ID=gene137;Dbxref=EcoGene:EG11973,GeneID:944859;Name=yadV;gbkey=Gene;gene=yadV;gene_biotype=protein_coding;gene_synonym=ECK0139,ecpD,JW0136;locus_tag=b0140 NC_000913.3 RefSeq CDS 155461 156201 . - 0 ID=cds135;Parent=gene137;Dbxref=ASAP:ABE-0000482,UniProtKB/Swiss-Prot:P33128,Genbank:NP_414682.1,EcoGene:EG11973,GeneID:944859;Name=NP_414682.1;Note=probable pilin chaperone similar to PapD;gbkey=CDS;gene=yadV;product=putative periplasmic pilin chaperone;protein_id=NP_414682.1;transl_table=11 NC_000913.3 RefSeq gene 156299 156883 . - . ID=gene138;Dbxref=EcoGene:EG12328,GeneID:944841;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;gene_synonym=ECK0140,JW0137;locus_tag=b0141 NC_000913.3 RefSeq CDS 156299 156883 . - 0 ID=cds136;Parent=gene138;Dbxref=ASAP:ABE-0000487,UniProtKB/Swiss-Prot:P37050,Genbank:NP_414683.1,EcoGene:EG12328,GeneID:944841;Name=NP_414683.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=yadN;product=putative fimbrial-like adhesin protein;protein_id=NP_414683.1;transl_table=11 NC_000913.3 RefSeq gene 157253 157732 . - . ID=gene139;Dbxref=EcoGene:EG11374,GeneID:948792;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;gene_synonym=ECK0141,JW0138;locus_tag=b0142 NC_000913.3 RefSeq CDS 157253 157732 . - 0 ID=cds137;Parent=gene139;Dbxref=ASAP:ABE-0000491,UniProtKB/Swiss-Prot:P26281,Genbank:NP_414684.1,EcoGene:EG11374,GeneID:948792;Name=NP_414684.1;Note=7%2C8-dihydro-6-hydroxymethylpterin- pyrophosphokinase;gbkey=CDS;gene=folK;product=2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase;protein_id=NP_414684.1;transl_table=11 NC_000913.3 RefSeq gene 157729 159126 . - . ID=gene140;Dbxref=EcoGene:EG10690,GeneID:947318;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;gene_synonym=ECK0142,JW5808;locus_tag=b0143 NC_000913.3 RefSeq CDS 157729 159126 . - 0 ID=cds138;Parent=gene140;Dbxref=ASAP:ABE-0000493,UniProtKB/Swiss-Prot:P0ABF1,Genbank:NP_414685.4,EcoGene:EG10690,GeneID:947318;Name=NP_414685.4;gbkey=CDS;gene=pcnB;product=poly(A) polymerase;protein_id=NP_414685.4;transl_table=11 NC_000913.3 RefSeq gene 159186 160112 . - . ID=gene141;Dbxref=EcoGene:EG11362,GeneID:944846;Name=gluQ;gbkey=Gene;gene=gluQ;gene_biotype=protein_coding;gene_synonym=ECK0143,JW5892,yadB;locus_tag=b0144 NC_000913.3 RefSeq CDS 159186 160112 . - 0 ID=cds139;Parent=gene141;Dbxref=ASAP:ABE-0000497,UniProtKB/Swiss-Prot:P27305,Genbank:NP_414686.3,EcoGene:EG11362,GeneID:944846;Name=NP_414686.3;Note=putative tRNA synthetase;gbkey=CDS;gene=gluQ;product=glutamyl-Q tRNA(Asp) synthetase;protein_id=NP_414686.3;transl_table=11 NC_000913.3 RefSeq gene 160149 160604 . - . ID=gene142;Dbxref=EcoGene:EG10230,GeneID:944850;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;gene_synonym=ECK0144,JW0141,msmA;locus_tag=b0145 NC_000913.3 RefSeq CDS 160149 160604 . - 0 ID=cds140;Parent=gene142;Dbxref=ASAP:ABE-0000499,UniProtKB/Swiss-Prot:P0ABS1,Genbank:NP_414687.1,EcoGene:EG10230,GeneID:944850;Name=NP_414687.1;Note=dnaK suppressor protein;gbkey=CDS;gene=dksA;product=transcriptional regulator of rRNA transcription%3B DnaK suppressor protein;protein_id=NP_414687.1;transl_table=11 NC_000913.3 RefSeq gene 160782 161486 . - . ID=gene143;Dbxref=EcoGene:EG10949,GeneID:944855;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;gene_synonym=ECK0145,JW0142,sfs,sfs1;locus_tag=b0146 NC_000913.3 RefSeq CDS 160782 161486 . - 0 ID=cds141;Parent=gene143;Dbxref=ASAP:ABE-0000503,UniProtKB/Swiss-Prot:P0A823,Genbank:NP_414688.1,EcoGene:EG10949,GeneID:944855;Name=NP_414688.1;Note=probable regulator for maltose metabolism;gbkey=CDS;gene=sfsA;product=sugar fermentation stimulation protein A;protein_id=NP_414688.1;transl_table=11 NC_000913.3 RefSeq gene 161501 162031 . - . ID=gene144;Dbxref=EcoGene:EG12330,GeneID:944848;Name=ligT;gbkey=Gene;gene=ligT;gene_biotype=protein_coding;gene_synonym=ECK0146,JW5011,yadP;locus_tag=b0147 NC_000913.3 RefSeq CDS 161501 162031 . - 0 ID=cds142;Parent=gene144;Dbxref=ASAP:ABE-0000505,UniProtKB/Swiss-Prot:P37025,Genbank:NP_414689.4,EcoGene:EG12330,GeneID:944848;Name=NP_414689.4;gbkey=CDS;gene=ligT;product=2'-5' RNA ligase;protein_id=NP_414689.4;transl_table=11 NC_000913.3 RefSeq gene 162105 164534 . + . ID=gene145;Dbxref=EcoGene:EG12329,GeneID:944845;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;gene_synonym=ECK0147,JW0144,yadO;locus_tag=b0148 NC_000913.3 RefSeq CDS 162105 164534 . + 0 ID=cds143;Parent=gene145;Dbxref=ASAP:ABE-0000510,UniProtKB/Swiss-Prot:P37024,Genbank:NP_414690.4,EcoGene:EG12329,GeneID:944845;Name=NP_414690.4;Note=helicase%2C ATP-dependent;gbkey=CDS;gene=hrpB;product=putative ATP-dependent helicase;protein_id=NP_414690.4;transl_table=11 NC_000913.3 RefSeq gene 164730 167264 . + . ID=gene146;Dbxref=EcoGene:EG10605,GeneID:944843;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ECK0148,JW0145,pbpF,ponB;locus_tag=b0149 NC_000913.3 RefSeq CDS 164730 167264 . + 0 ID=cds144;Parent=gene146;Dbxref=ASAP:ABE-0000516,UniProtKB/Swiss-Prot:P02919,Genbank:NP_414691.1,EcoGene:EG10605,GeneID:944843;Name=NP_414691.1;Note=peptidoglycan synthetase%3B penicillin-binding protein 1B;gbkey=CDS;gene=mrcB;product=fused glycosyl transferase and transpeptidase;protein_id=NP_414691.1;transl_table=11 NC_000913.3 RefSeq repeat_region 167281 167305 . + . ID=id16;Note=REP12 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 167484 169727 . + . ID=gene147;Dbxref=EcoGene:EG10302,GeneID:944856;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;gene_synonym=ECK0149,JW0146,T1,tonA;locus_tag=b0150 NC_000913.3 RefSeq CDS 167484 169727 . + 0 ID=cds145;Parent=gene147;Dbxref=ASAP:ABE-0000520,UniProtKB/Swiss-Prot:P06971,Genbank:NP_414692.1,EcoGene:EG10302,GeneID:944856;Name=NP_414692.1;Note=outer membrane protein receptor for ferrichrome%2C colicin M%2C and phages T1%2C T5%2C and phi80;gbkey=CDS;gene=fhuA;product=ferrichrome outer membrane transporter;protein_id=NP_414692.1;transl_table=11 NC_000913.3 RefSeq gene 169778 170575 . + . ID=gene148;Dbxref=EcoGene:EG10304,GeneID:945250;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;gene_synonym=ECK0150,JW0147;locus_tag=b0151 NC_000913.3 RefSeq CDS 169778 170575 . + 0 ID=cds146;Parent=gene148;Dbxref=ASAP:ABE-0000522,UniProtKB/Swiss-Prot:P07821,Genbank:NP_414693.1,EcoGene:EG10304,GeneID:945250;Name=NP_414693.1;Note=ATP-binding component of hydroxymate-dependent iron transport;gbkey=CDS;gene=fhuC;product=iron(3+)-hydroxamate import ABC transporter ATPase;protein_id=NP_414693.1;transl_table=11 NC_000913.3 RefSeq gene 170575 171465 . + . ID=gene149;Dbxref=EcoGene:EG10305,GeneID:947510;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;gene_synonym=ECK0151,JW0148;locus_tag=b0152 NC_000913.3 RefSeq CDS 170575 171465 . + 0 ID=cds147;Parent=gene149;Dbxref=ASAP:ABE-0000524,UniProtKB/Swiss-Prot:P07822,Genbank:NP_414694.1,EcoGene:EG10305,GeneID:947510;Name=NP_414694.1;Note=hydroxamate-dependent iron uptake%2C cytoplasmic membrane component%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=fhuD;product=iron(3+)-hydroxamate import ABC transporter periplasmic binding protein;protein_id=NP_414694.1;transl_table=11 NC_000913.3 RefSeq gene 171462 173444 . + . ID=gene150;Dbxref=EcoGene:EG10303,GeneID:946890;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;gene_synonym=ECK0152,JW0149;locus_tag=b0153 NC_000913.3 RefSeq CDS 171462 173444 . + 0 ID=cds148;Parent=gene150;Dbxref=ASAP:ABE-0000526,UniProtKB/Swiss-Prot:P06972,Genbank:NP_414695.1,EcoGene:EG10303,GeneID:946890;Name=NP_414695.1;gbkey=CDS;gene=fhuB;product=iron(3+)-hydroxamate import ABC transporter permease;protein_id=NP_414695.1;transl_table=11 NC_000913.3 RefSeq repeat_region 173504 173588 . + . ID=id17;Note=REP13 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 173602 174882 . - . ID=gene151;Dbxref=EcoGene:EG10432,GeneID:946892;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;gene_synonym=ECK0153,gsa?,JW0150,popC;locus_tag=b0154 NC_000913.3 RefSeq CDS 173602 174882 . - 0 ID=cds149;Parent=gene151;Dbxref=ASAP:ABE-0000529,UniProtKB/Swiss-Prot:P23893,Genbank:NP_414696.1,EcoGene:EG10432,GeneID:946892;Name=NP_414696.1;gbkey=CDS;gene=hemL;product=glutamate-1-semialdehyde aminotransferase (aminomutase);protein_id=NP_414696.1;transl_table=11 NC_000913.3 RefSeq gene 175107 176528 . + . ID=gene152;Dbxref=EcoGene:EG12331,GeneID:946715;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;gene_synonym=ECK0154,eriC,JW5012,yadQ;locus_tag=b0155 NC_000913.3 RefSeq CDS 175107 176528 . + 0 ID=cds150;Parent=gene152;Dbxref=ASAP:ABE-0000533,UniProtKB/Swiss-Prot:P37019,Genbank:NP_414697.1,EcoGene:EG12331,GeneID:946715;Name=NP_414697.1;Note=putative channel transporter;gbkey=CDS;gene=clcA;product=H(+)/Cl(-) exchange transporter;protein_id=NP_414697.1;transl_table=11 NC_000913.3 RefSeq gene 176610 176954 . + . ID=gene153;Dbxref=EcoGene:EG12332,GeneID:944857;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;gene_synonym=ECK0155,JW0152,yadR;locus_tag=b0156 NC_000913.3 RefSeq CDS 176610 176954 . + 0 ID=cds151;Parent=gene153;Dbxref=ASAP:ABE-0000538,UniProtKB/Swiss-Prot:P0ACC3,Genbank:NP_414698.1,EcoGene:EG12332,GeneID:944857;Name=NP_414698.1;gbkey=CDS;gene=erpA;product=iron-sulfur cluster insertion protein;protein_id=NP_414698.1;transl_table=11 NC_000913.3 RefSeq repeat_region 176969 176987 . + . ID=id18;Note=REP14 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 177001 177624 . - . ID=gene154;Dbxref=EcoGene:EG12333,GeneID:949062;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;gene_synonym=ECK0156,JW0153;locus_tag=b0157 NC_000913.3 RefSeq CDS 177001 177624 . - 0 ID=cds152;Parent=gene154;Dbxref=ASAP:ABE-0000540,UniProtKB/Swiss-Prot:P0AFP0,Genbank:NP_414699.1,EcoGene:EG12333,GeneID:949062;Name=NP_414699.1;gbkey=CDS;gene=yadS;product=UPF0126 family inner membrane protein;protein_id=NP_414699.1;transl_table=11 NC_000913.3 RefSeq gene 177662 178462 . - . ID=gene155;Dbxref=EcoGene:EG12334,GeneID:947574;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;gene_synonym=ECK0157,JW0154,yadT;locus_tag=b0158 NC_000913.3 RefSeq CDS 177662 178462 . - 0 ID=cds153;Parent=gene155;Dbxref=ASAP:ABE-0000542,UniProtKB/Swiss-Prot:P37028,Genbank:NP_414700.1,EcoGene:EG12334,GeneID:947574;Name=NP_414700.1;gbkey=CDS;gene=btuF;product=vitamin B12 ABC transporter periplasmic binding protein;protein_id=NP_414700.1;transl_table=11 NC_000913.3 RefSeq gene 178455 179153 . - . ID=gene156;Dbxref=EcoGene:EG11090,GeneID:948542;Name=mtn;gbkey=Gene;gene=mtn;gene_biotype=protein_coding;gene_synonym=ECK0158,JW0155,mtnN,pfs,yadA;locus_tag=b0159 NC_000913.3 RefSeq CDS 178455 179153 . - 0 ID=cds154;Parent=gene156;Dbxref=ASAP:ABE-0000545,UniProtKB/Swiss-Prot:P0AF12,Genbank:NP_414701.1,EcoGene:EG11090,GeneID:948542;Name=NP_414701.1;gbkey=CDS;gene=mtn;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=NP_414701.1;transl_table=11 NC_000913.3 RefSeq gene 179237 180754 . + . ID=gene157;Dbxref=EcoGene:EG10225,GeneID:947177;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;gene_synonym=ECK0159,JW0156,optA;locus_tag=b0160 NC_000913.3 RefSeq CDS 179237 180754 . + 0 ID=cds155;Parent=gene157;Dbxref=ASAP:ABE-0000548,UniProtKB/Swiss-Prot:P15723,Genbank:NP_414702.1,EcoGene:EG10225,GeneID:947177;Name=NP_414702.1;gbkey=CDS;gene=dgt;product=deoxyguanosine triphosphate triphosphohydrolase;protein_id=NP_414702.1;transl_table=11 NC_000913.3 RefSeq gene 180884 182308 . + . ID=gene158;Dbxref=EcoGene:EG10463,GeneID:947139;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;gene_synonym=ECK0160,htrA,JW0157,ptd;locus_tag=b0161 NC_000913.3 RefSeq CDS 180884 182308 . + 0 ID=cds156;Parent=gene158;Dbxref=ASAP:ABE-0000551,UniProtKB/Swiss-Prot:P0C0V0,Genbank:NP_414703.1,EcoGene:EG10463,GeneID:947139;Name=NP_414703.1;Note=periplasmic serine protease Do%3B heat shock protein HtrA;gbkey=CDS;gene=degP;product=serine endoprotease (protease Do)%2C membrane-associated;protein_id=NP_414703.1;transl_table=11 NC_000913.3 RefSeq gene 182463 183620 . + . ID=gene159;Dbxref=EcoGene:EG12335,GeneID:944860;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;gene_synonym=ECK0161,JW5013,sdaR,yaeG;locus_tag=b0162 NC_000913.3 RefSeq CDS 182463 183620 . + 0 ID=cds157;Parent=gene159;Dbxref=ASAP:ABE-0000554,UniProtKB/Swiss-Prot:P37047,Genbank:NP_414704.4,EcoGene:EG12335,GeneID:944860;Name=NP_414704.4;gbkey=CDS;gene=cdaR;product=carbohydrate diacid regulon transcriptional regulator%3B autoregulator;protein_id=NP_414704.4;transl_table=11 NC_000913.3 RefSeq gene 183709 184095 . - . ID=gene160;Dbxref=EcoGene:EG12336,GeneID:947044;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;gene_synonym=ECK0162,JW0159;locus_tag=b0163 NC_000913.3 RefSeq CDS 183709 184095 . - 0 ID=cds158;Parent=gene160;Dbxref=ASAP:ABE-0000556,UniProtKB/Swiss-Prot:P62768,Genbank:NP_414705.1,EcoGene:EG12336,GeneID:947044;Name=NP_414705.1;Note=putative structural protein;gbkey=CDS;gene=yaeH;product=UPF0325 family protein;protein_id=NP_414705.1;transl_table=11 NC_000913.3 RefSeq gene 184257 185069 . - . ID=gene161;Dbxref=EcoGene:EG12337,GeneID:945002;Name=yaeI;gbkey=Gene;gene=yaeI;gene_biotype=protein_coding;gene_synonym=ECK0163,JW5014;locus_tag=b0164 NC_000913.3 RefSeq CDS 184257 185069 . - 0 ID=cds159;Parent=gene161;Dbxref=ASAP:ABE-0000559,UniProtKB/Swiss-Prot:P37049,Genbank:NP_414706.2,EcoGene:EG12337,GeneID:945002;Name=NP_414706.2;gbkey=CDS;gene=yaeI;product=phosphodiesterase with model substrate bis-pNPP;protein_id=NP_414706.2;transl_table=11 NC_000913.3 RefSeq gene 185123 185947 . - . ID=gene162;Dbxref=EcoGene:EG10207,GeneID:944862;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;gene_synonym=ECK0164,JW0161,ssa;locus_tag=b0166 NC_000913.3 RefSeq CDS 185123 185947 . - 0 ID=cds160;Parent=gene162;Dbxref=ASAP:ABE-0000565,UniProtKB/Swiss-Prot:P0A9D8,Genbank:NP_414708.1,EcoGene:EG10207,GeneID:944862;Name=NP_414708.1;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase;protein_id=NP_414708.1;transl_table=11 NC_000913.3 RefSeq gene 185978 188650 . - . ID=gene163;Dbxref=EcoGene:EG11411,GeneID:944863;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;gene_synonym=ECK0165,JW0162;locus_tag=b0167 NC_000913.3 RefSeq CDS 185978 188650 . - 0 ID=cds161;Parent=gene163;Dbxref=ASAP:ABE-0000568,UniProtKB/Swiss-Prot:P27249,Genbank:NP_414709.1,EcoGene:EG11411,GeneID:944863;Name=NP_414709.1;Note=protein PII%3B uridylyltransferase acts on regulator of glnA;gbkey=CDS;gene=glnD;product=uridylyltransferase;protein_id=NP_414709.1;transl_table=11 NC_000913.3 RefSeq gene 188712 189506 . - . ID=gene164;Dbxref=EcoGene:EG10570,GeneID:947882;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;gene_synonym=ECK0166,JW0163,pepM;locus_tag=b0168 NC_000913.3 RefSeq CDS 188712 189506 . - 0 ID=cds162;Parent=gene164;Dbxref=ASAP:ABE-0000571,UniProtKB/Swiss-Prot:P0AE18,Genbank:NP_414710.1,EcoGene:EG10570,GeneID:947882;Name=NP_414710.1;gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=NP_414710.1;transl_table=11 NC_000913.3 RefSeq gene 189712 189847 . + . ID=gene165;Dbxref=EcoGene:EG31135,GeneID:2847773;Name=tff;gbkey=Gene;gene=tff;gene_biotype=ncRNA;gene_synonym=ECK0167,JWR0225,t44;locus_tag=b4414 NC_000913.3 RefSeq ncRNA 189712 189847 . + . ID=rna2;Parent=gene165;Dbxref=ASAP:ABE-0047239,EcoGene:EG31135,GeneID:2847773;Note=identified in a large scale screen;gbkey=ncRNA;gene=tff;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 189712 189847 . + . ID=id19;Parent=rna2;Dbxref=ASAP:ABE-0047239,EcoGene:EG31135,GeneID:2847773;Note=identified in a large scale screen;gbkey=ncRNA;gene=tff;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 189874 190599 . + . ID=gene166;Dbxref=EcoGene:EG10901,GeneID:947874;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;gene_synonym=ECK0168,JW0164;locus_tag=b0169 NC_000913.3 RefSeq CDS 189874 190599 . + 0 ID=cds163;Parent=gene166;Dbxref=ASAP:ABE-0000575,UniProtKB/Swiss-Prot:P0A7V0,Genbank:NP_414711.1,EcoGene:EG10901,GeneID:947874;Name=NP_414711.1;gbkey=CDS;gene=rpsB;product=30S ribosomal subunit protein S2;protein_id=NP_414711.1;transl_table=11 NC_000913.3 RefSeq gene 190857 191708 . + . ID=gene167;Dbxref=EcoGene:EG11033,GeneID:944866;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;gene_synonym=ECK0169,JW0165;locus_tag=b0170 NC_000913.3 RefSeq CDS 190857 191708 . + 0 ID=cds164;Parent=gene167;Dbxref=ASAP:ABE-0000579,UniProtKB/Swiss-Prot:P0A6P1,Genbank:NP_414712.1,EcoGene:EG11033,GeneID:944866;Name=NP_414712.1;gbkey=CDS;gene=tsf;product=translation elongation factor EF-Ts;protein_id=NP_414712.1;transl_table=11 NC_000913.3 RefSeq gene 191855 192580 . + . ID=gene168;Dbxref=EcoGene:EG11539,GeneID:944989;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;gene_synonym=ECK0170,JW0166,smbA,umk;locus_tag=b0171 NC_000913.3 RefSeq CDS 191855 192580 . + 0 ID=cds165;Parent=gene168;Dbxref=ASAP:ABE-0000582,UniProtKB/Swiss-Prot:P0A7E9,Genbank:NP_414713.1,EcoGene:EG11539,GeneID:944989;Name=NP_414713.1;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=NP_414713.1;transl_table=11 NC_000913.3 RefSeq gene 192872 193429 . + . ID=gene169;Dbxref=EcoGene:EG10335,GeneID:946122;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;gene_synonym=ECK0171,JW0167,rrf;locus_tag=b0172 NC_000913.3 RefSeq CDS 192872 193429 . + 0 ID=cds166;Parent=gene169;Dbxref=ASAP:ABE-0000588,UniProtKB/Swiss-Prot:P0A805,Genbank:NP_414714.1,EcoGene:EG10335,GeneID:946122;Name=NP_414714.1;Note=ribosome releasing factor;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=NP_414714.1;transl_table=11 NC_000913.3 RefSeq gene 193521 194717 . + . ID=gene170;Dbxref=EcoGene:EG12715,GeneID:945019;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;gene_synonym=ECK0172,ispC,JW0168,yaeM;locus_tag=b0173 NC_000913.3 RefSeq CDS 193521 194717 . + 0 ID=cds167;Parent=gene170;Dbxref=ASAP:ABE-0000592,UniProtKB/Swiss-Prot:P45568,Genbank:NP_414715.1,EcoGene:EG12715,GeneID:945019;Name=NP_414715.1;gbkey=CDS;gene=dxr;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=NP_414715.1;transl_table=11 NC_000913.3 RefSeq gene 194903 195664 . + . ID=gene171;Dbxref=EcoGene:EG13329,GeneID:944874;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=ECK0173,JW0169,rth,uppS,yaeS;locus_tag=b0174 NC_000913.3 RefSeq CDS 194903 195664 . + 0 ID=cds168;Parent=gene171;Dbxref=ASAP:ABE-0000595,UniProtKB/Swiss-Prot:P60472,Genbank:NP_414716.1,EcoGene:EG13329,GeneID:944874;Name=NP_414716.1;Note=undecaprenyl pyrophosphate synthetase (di-trans%2Cpoly-cis-decaprenylcistransferase);gbkey=CDS;gene=ispU;product=undecaprenyl pyrophosphate synthase;protein_id=NP_414716.1;transl_table=11 NC_000913.3 RefSeq gene 195677 196534 . + . ID=gene172;Dbxref=EcoGene:EG10139,GeneID:944876;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;gene_synonym=ECK0174,JW5810;locus_tag=b0175 NC_000913.3 RefSeq CDS 195677 196534 . + 0 ID=cds169;Parent=gene172;Dbxref=ASAP:ABE-0000600,UniProtKB/Swiss-Prot:P0ABG1,Genbank:NP_414717.2,EcoGene:EG10139,GeneID:944876;Name=NP_414717.2;Note=CDP-diglyceride synthetase;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=NP_414717.2;transl_table=11 NC_000913.3 RefSeq gene 196546 197898 . + . ID=gene173;Dbxref=EcoGene:EG12436,GeneID:944871;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;gene_synonym=ecfE,ECK0175,JW0171,yaeL;locus_tag=b0176 NC_000913.3 RefSeq CDS 196546 197898 . + 0 ID=cds170;Parent=gene173;Dbxref=ASAP:ABE-0000603,UniProtKB/Swiss-Prot:P0AEH1,Genbank:NP_414718.1,EcoGene:EG12436,GeneID:944871;Name=NP_414718.1;gbkey=CDS;gene=rseP;product=inner membrane zinc RIP metalloprotease%3B RpoE activator%2C by degrading RseA%3B cleaved signal peptide endoprotease;protein_id=NP_414718.1;transl_table=11 NC_000913.3 RefSeq gene 197928 200360 . + . ID=gene174;Dbxref=EcoGene:EG12676,GeneID:944870;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;gene_synonym=ecfK,ECK0176,JW0172,omp85,yaeT,yzzN,yzzY;locus_tag=b0177 NC_000913.3 RefSeq CDS 197928 200360 . + 0 ID=cds171;Parent=gene174;Dbxref=ASAP:ABE-0000605,UniProtKB/Swiss-Prot:P0A940,Genbank:NP_414719.1,EcoGene:EG12676,GeneID:944870;Name=NP_414719.1;Note=putative outer membrane antigen;gbkey=CDS;gene=bamA;product=BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor;protein_id=NP_414719.1;transl_table=11 NC_000913.3 RefSeq gene 200482 200967 . + . ID=gene175;Dbxref=EcoGene:EG10455,GeneID:944861;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=ECK0177,hlpA,JW0173,ompH;locus_tag=b0178 NC_000913.3 RefSeq CDS 200482 200967 . + 0 ID=cds172;Parent=gene175;Dbxref=ASAP:ABE-0000608,UniProtKB/Swiss-Prot:P0AEU7,Genbank:NP_414720.1,EcoGene:EG10455,GeneID:944861;Name=NP_414720.1;Note=periplasmic molecular chaperone for outer membrane proteins;gbkey=CDS;gene=skp;product=periplasmic chaperone;protein_id=NP_414720.1;transl_table=11 NC_000913.3 RefSeq gene 200971 201996 . + . ID=gene176;Dbxref=EcoGene:EG10316,GeneID:944882;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;gene_synonym=ECK0178,firA,JW0174,omsA,ssc;locus_tag=b0179 NC_000913.3 RefSeq CDS 200971 201996 . + 0 ID=cds173;Parent=gene176;Dbxref=ASAP:ABE-0000610,UniProtKB/Swiss-Prot:P21645,Genbank:NP_414721.1,EcoGene:EG10316,GeneID:944882;Name=NP_414721.1;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase;protein_id=NP_414721.1;transl_table=11 NC_000913.3 RefSeq gene 202101 202556 . + . ID=gene177;Dbxref=EcoGene:EG11284,GeneID:944888;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;gene_synonym=ECK0179,JW0175,sabA,sefA,sfhC,yaeA;locus_tag=b0180 NC_000913.3 RefSeq CDS 202101 202556 . + 0 ID=cds174;Parent=gene177;Dbxref=ASAP:ABE-0000613,UniProtKB/Swiss-Prot:P0A6Q6,Genbank:NP_414722.1,EcoGene:EG11284,GeneID:944888;Name=NP_414722.1;gbkey=CDS;gene=fabZ;product=(3R)-hydroxymyristol acyl carrier protein dehydratase;protein_id=NP_414722.1;transl_table=11 NC_000913.3 RefSeq gene 202560 203348 . + . ID=gene178;Dbxref=EcoGene:EG10545,GeneID:944849;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;gene_synonym=ECK0180,JW0176;locus_tag=b0181 NC_000913.3 RefSeq CDS 202560 203348 . + 0 ID=cds175;Parent=gene178;Dbxref=ASAP:ABE-0000618,UniProtKB/Swiss-Prot:P0A722,Genbank:NP_414723.1,EcoGene:EG10545,GeneID:944849;Name=NP_414723.1;Note=UDP-N-acetylglucosamine acetyltransferase%3B lipid A biosynthesis;gbkey=CDS;gene=lpxA;product=UDP-N-acetylglucosamine acetyltransferase;protein_id=NP_414723.1;transl_table=11 NC_000913.3 RefSeq gene 203348 204496 . + . ID=gene179;Dbxref=EcoGene:EG10546,GeneID:944838;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;gene_synonym=ECK0181,JW0177,pgsB;locus_tag=b0182 NC_000913.3 RefSeq CDS 203348 204496 . + 0 ID=cds176;Parent=gene179;Dbxref=ASAP:ABE-0000620,UniProtKB/Swiss-Prot:P10441,Genbank:NP_414724.1,EcoGene:EG10546,GeneID:944838;Name=NP_414724.1;Note=tetraacyldisaccharide-1-P%3B lipid A biosynthesis%2C penultimate step;gbkey=CDS;gene=lpxB;product=tetraacyldisaccharide-1-P synthase;protein_id=NP_414724.1;transl_table=11 NC_000913.3 RefSeq gene 204493 205089 . + . ID=gene180;Dbxref=EcoGene:EG10861,GeneID:944852;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;gene_synonym=ECK0182,JW0178;locus_tag=b0183 NC_000913.3 RefSeq CDS 204493 205089 . + 0 ID=cds177;Parent=gene180;Dbxref=ASAP:ABE-0000622,UniProtKB/Swiss-Prot:P10442,Genbank:NP_414725.1,EcoGene:EG10861,GeneID:944852;Name=NP_414725.1;Note=RNAse HII%2C degrades RNA of DNA-RNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII%2C degrades RNA of DNA-RNA hybrids;protein_id=NP_414725.1;transl_table=11 NC_000913.3 RefSeq gene 205126 208608 . + . ID=gene181;Dbxref=EcoGene:EG10238,GeneID:944877;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;gene_synonym=ECK0183,JW0179,polC,sdgC;locus_tag=b0184 NC_000913.3 RefSeq CDS 205126 208608 . + 0 ID=cds178;Parent=gene181;Dbxref=ASAP:ABE-0000624,UniProtKB/Swiss-Prot:P10443,Genbank:NP_414726.1,EcoGene:EG10238,GeneID:944877;Name=NP_414726.1;Note=DNA polymerase III%2C alpha subunit;gbkey=CDS;gene=dnaE;product=DNA polymerase III alpha subunit;protein_id=NP_414726.1;transl_table=11 NC_000913.3 RefSeq gene 208621 209580 . + . ID=gene182;Dbxref=EcoGene:EG11647,GeneID:944895;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;gene_synonym=ECK0184,JW0180;locus_tag=b0185 NC_000913.3 RefSeq CDS 208621 209580 . + 0 ID=cds179;Parent=gene182;Dbxref=ASAP:ABE-0000630,UniProtKB/Swiss-Prot:P0ABD5,Genbank:NP_414727.1,EcoGene:EG11647,GeneID:944895;Name=NP_414727.1;Note=acetylCoA carboxylase%2C carboxytransferase component%2C alpha subunit;gbkey=CDS;gene=accA;product=acetyl-CoA carboxylase%2C carboxytransferase%2C alpha subunit;protein_id=NP_414727.1;transl_table=11 NC_000913.3 RefSeq gene 209679 211820 . + . ID=gene183;Dbxref=EcoGene:EG13219,GeneID:944887;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;gene_synonym=ECK0185,JW0181,ldc,LDC2,ldcH;locus_tag=b0186 NC_000913.3 RefSeq CDS 209679 211820 . + 0 ID=cds180;Parent=gene183;Dbxref=ASAP:ABE-0000633,UniProtKB/Swiss-Prot:P52095,Genbank:NP_414728.1,EcoGene:EG13219,GeneID:944887;Name=NP_414728.1;gbkey=CDS;gene=ldcC;product=lysine decarboxylase 2%2C constitutive;protein_id=NP_414728.1;transl_table=11 NC_000913.3 RefSeq gene 211877 212266 . + . ID=gene184;Dbxref=EcoGene:EG13224,GeneID:944875;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;gene_synonym=ECK0186,JW0182;locus_tag=b0187 NC_000913.3 RefSeq CDS 211877 212266 . + 0 ID=cds181;Parent=gene184;Dbxref=ASAP:ABE-0000635,UniProtKB/Swiss-Prot:P52096,Genbank:NP_414729.4,EcoGene:EG13224,GeneID:944875;Name=NP_414729.4;gbkey=CDS;gene=yaeR;product=putative lyase;protein_id=NP_414729.4;transl_table=11 NC_000913.3 RefSeq gene 212331 213629 . + . ID=gene185;Dbxref=EcoGene:EG13220,GeneID:944889;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;gene_synonym=ECK0187,JW0183,mesJ,yaeN;locus_tag=b0188 NC_000913.3 RefSeq CDS 212331 213629 . + 0 ID=cds182;Parent=gene185;Dbxref=ASAP:ABE-0000638,UniProtKB/Swiss-Prot:P52097,Genbank:NP_414730.1,EcoGene:EG13220,GeneID:944889;Name=NP_414730.1;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthetase;protein_id=NP_414730.1;transl_table=11 NC_000913.3 RefSeq repeat_region 213632 213668 . + . ID=id20;Note=REP15 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 213678 213932 . - . ID=gene186;Dbxref=EcoGene:EG13221,GeneID:944891;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;gene_synonym=ECK0188,JW0184,mesJ,yaeO;locus_tag=b0189 NC_000913.3 RefSeq CDS 213678 213932 . - 0 ID=cds183;Parent=gene186;Dbxref=ASAP:ABE-0000641,UniProtKB/Swiss-Prot:P0AFW8,Genbank:NP_414731.2,EcoGene:EG13221,GeneID:944891;Name=NP_414731.2;gbkey=CDS;gene=rof;product=modulator of Rho-dependent transcription termination;protein_id=NP_414731.2;transl_table=11 NC_000913.3 RefSeq gene 213925 214125 . - . ID=gene187;Dbxref=EcoGene:EG13222,GeneID:1450233;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;gene_synonym=ECK0189,JW0185;locus_tag=b4406 NC_000913.3 RefSeq CDS 213925 214125 . - 0 ID=cds184;Parent=gene187;Dbxref=ASAP:ABE-0047214,UniProtKB/Swiss-Prot:P0A8K5,Genbank:YP_026160.1,EcoGene:EG13222,GeneID:1450233;Name=YP_026160.1;Note=conserved hypothetical protein;gbkey=CDS;gene=yaeP;product=UPF0253 family protein;protein_id=YP_026160.1;transl_table=11 NC_000913.3 RefSeq gene 214291 214836 . + . ID=gene188;Dbxref=EcoGene:EG13223,GeneID:946809;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;gene_synonym=ECK0190,JW0186;locus_tag=b0190 NC_000913.3 RefSeq CDS 214291 214836 . + 0 ID=cds185;Parent=gene188;Dbxref=ASAP:ABE-0000648,UniProtKB/Swiss-Prot:P0AA97,Genbank:NP_414732.1,EcoGene:EG13223,GeneID:946809;Name=NP_414732.1;gbkey=CDS;gene=yaeQ;product=PDDEXK superfamily protein;protein_id=NP_414732.1;transl_table=11 NC_000913.3 RefSeq gene 214833 215255 . + . ID=gene189;Dbxref=EcoGene:EG12354,GeneID:946046;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;gene_synonym=ECK0191,JW0187,yaeJ;locus_tag=b0191 NC_000913.3 RefSeq CDS 214833 215255 . + 0 ID=cds186;Parent=gene189;Dbxref=ASAP:ABE-0000650,UniProtKB/Swiss-Prot:P40711,Genbank:NP_414733.1,EcoGene:EG12354,GeneID:946046;Name=NP_414733.1;gbkey=CDS;gene=arfB;product=alternative stalled-ribosome rescue factor B%3B peptidyl-tRNA hydrolase%2C ribosome-attached;protein_id=NP_414733.1;transl_table=11 NC_000913.3 RefSeq gene 215269 215979 . + . ID=gene190;Dbxref=EcoGene:EG12137,GeneID:946782;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF,ECK0192,JW0188;locus_tag=b0192 NC_000913.3 RefSeq CDS 215269 215979 . + 0 ID=cds187;Parent=gene190;Dbxref=ASAP:ABE-0000652,UniProtKB/Swiss-Prot:P40710,Genbank:NP_414734.1,EcoGene:EG12137,GeneID:946782;Name=NP_414734.1;Note=copper homeostasis protein (lipoprotein);gbkey=CDS;gene=nlpE;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=NP_414734.1;transl_table=11 NC_000913.3 RefSeq repeat_region 216027 216137 . + . ID=id21;Note=RIP16 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 216179 217003 . - . ID=gene191;Dbxref=EcoGene:EG12138,GeneID:944892;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;gene_synonym=ECK0193,JW5016,yaeK;locus_tag=b0193 NC_000913.3 RefSeq CDS 216179 217003 . - 0 ID=cds188;Parent=gene191;Dbxref=ASAP:ABE-0000655,UniProtKB/Swiss-Prot:P37056,Genbank:NP_414735.4,EcoGene:EG12138,GeneID:944892;Name=NP_414735.4;gbkey=CDS;gene=yaeF;product=putative lipoprotein;protein_id=NP_414735.4;transl_table=11 NC_000913.3 RefSeq gene 217057 218775 . - . ID=gene192;Dbxref=EcoGene:EG10770,GeneID:949116;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;gene_synonym=drpA,ECK0194,JW0190;locus_tag=b0194 NC_000913.3 RefSeq CDS 217057 218775 . - 0 ID=cds189;Parent=gene192;Dbxref=ASAP:ABE-0000657,UniProtKB/Swiss-Prot:P16659,Genbank:NP_414736.1,EcoGene:EG10770,GeneID:949116;Name=NP_414736.1;Note=proline tRNA synthetase;gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=NP_414736.1;transl_table=11 NC_000913.3 RefSeq gene 218887 219594 . - . ID=gene193;Dbxref=EcoGene:EG11503,GeneID:949112;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;gene_synonym=ECK0195,JW0191,yaeB;locus_tag=b0195 NC_000913.3 RefSeq CDS 218887 219594 . - 0 ID=cds190;Parent=gene193;Dbxref=ASAP:ABE-0000661,UniProtKB/Swiss-Prot:P28634,Genbank:NP_414737.1,EcoGene:EG11503,GeneID:949112;Name=NP_414737.1;gbkey=CDS;gene=tsaA;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase%2C SAM-dependent;protein_id=NP_414737.1;transl_table=11 NC_000913.3 RefSeq gene 219591 219995 . - . ID=gene194;Dbxref=EcoGene:EG11502,GeneID:949113;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;gene_synonym=ECK0196,JW0192;locus_tag=b0196 NC_000913.3 RefSeq CDS 219591 219995 . - 0 ID=cds191;Parent=gene194;Dbxref=ASAP:ABE-0000663,UniProtKB/Swiss-Prot:P69411,Genbank:NP_414738.1,EcoGene:EG11502,GeneID:949113;Name=NP_414738.1;Note=regulator in colanic acid synthesis%3B interacts with RcsB;gbkey=CDS;gene=rcsF;product=putative outer membrane protein;protein_id=NP_414738.1;transl_table=11 NC_000913.3 RefSeq gene 220113 220928 . - . ID=gene195;Dbxref=EcoGene:EG11504,GeneID:944893;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;gene_synonym=ECK0197,JW0193,metD,yaeC;locus_tag=b0197 NC_000913.3 RefSeq CDS 220113 220928 . - 0 ID=cds192;Parent=gene195;Dbxref=ASAP:ABE-0000666,UniProtKB/Swiss-Prot:P28635,Genbank:NP_414739.1,EcoGene:EG11504,GeneID:944893;Name=NP_414739.1;Note=D-methionine transport protein (ABC superfamily%2C peri_bind);gbkey=CDS;gene=metQ;product=DL-methionine transporter subunit;protein_id=NP_414739.1;transl_table=11 NC_000913.3 RefSeq gene 220968 221621 . - . ID=gene196;Dbxref=EcoGene:EG11737,GeneID:944894;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;gene_synonym=ECK0198,JW0194,metD,yaeE;locus_tag=b0198 NC_000913.3 RefSeq CDS 220968 221621 . - 0 ID=cds193;Parent=gene196;Dbxref=ASAP:ABE-0000668,UniProtKB/Swiss-Prot:P31547,Genbank:NP_414740.1,EcoGene:EG11737,GeneID:944894;Name=NP_414740.1;Note=D- and L-methionine transport protein (ABC superfamily%2C membrane);gbkey=CDS;gene=metI;product=DL-methionine transporter subunit;protein_id=NP_414740.1;transl_table=11 NC_000913.3 RefSeq gene 221614 222645 . - . ID=gene197;Dbxref=EcoGene:EG11621,GeneID:944896;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;gene_synonym=abc,ECK0199,JW0195,metD;locus_tag=b0199 NC_000913.3 RefSeq CDS 221614 222645 . - 0 ID=cds194;Parent=gene197;Dbxref=ASAP:ABE-0000671,UniProtKB/Swiss-Prot:P30750,Genbank:NP_414741.1,EcoGene:EG11621,GeneID:944896;Name=NP_414741.1;Note=D- and L-methionine transport protein (ABC superfamily%2C atp_bind);gbkey=CDS;gene=metN;product=DL-methionine transporter subunit;protein_id=NP_414741.1;transl_table=11 NC_000913.3 RefSeq gene 222833 223408 . + . ID=gene198;Dbxref=EcoGene:EG11736,GeneID:944879;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;gene_synonym=ECK0200,gmbC,gmbX,gmhX,JW0196,wcbN,yaeD;locus_tag=b0200 NC_000913.3 RefSeq CDS 222833 223408 . + 0 ID=cds195;Parent=gene198;Dbxref=ASAP:ABE-0000675,UniProtKB/Swiss-Prot:P63228,Genbank:NP_414742.1,EcoGene:EG11736,GeneID:944879;Name=NP_414742.1;gbkey=CDS;gene=gmhB;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=NP_414742.1;transl_table=11 NC_000913.3 RefSeq gene 223771 225312 . + . ID=gene199;Dbxref=EcoGene:EG30090,GeneID:944897;Name=rrsH;gbkey=Gene;gene=rrsH;gene_biotype=rRNA;gene_synonym=ECK0201,JWR0001;locus_tag=b0201 NC_000913.3 RefSeq rRNA 223771 225312 . + . ID=rna3;Parent=gene199;Dbxref=ASAP:ABE-0000677,EcoGene:EG30090,GeneID:944897;gbkey=rRNA;gene=rrsH;product=16S ribosomal RNA of rrnH operon NC_000913.3 RefSeq exon 223771 225312 . + . ID=id22;Parent=rna3;Dbxref=ASAP:ABE-0000677,EcoGene:EG30090,GeneID:944897;gbkey=rRNA;gene=rrsH;product=16S ribosomal RNA of rrnH operon NC_000913.3 RefSeq gene 225381 225457 . + . ID=gene200;Dbxref=EcoGene:EG30045,GeneID:944884;Name=ileV;gbkey=Gene;gene=ileV;gene_biotype=tRNA;gene_synonym=ECK0202,JWR0002;locus_tag=b0202 NC_000913.3 RefSeq tRNA 225381 225457 . + . ID=rna4;Parent=gene200;Dbxref=ASAP:ABE-0000679,EcoGene:EG30045,GeneID:944884;Note=anticodon: GAU;gbkey=tRNA;gene=ileV;product=tRNA-Ile NC_000913.3 RefSeq exon 225381 225457 . + . ID=id23;Parent=rna4;Dbxref=ASAP:ABE-0000679,EcoGene:EG30045,GeneID:944884;Note=anticodon: GAU;gbkey=tRNA;gene=ileV;product=tRNA-Ile NC_000913.3 RefSeq gene 225500 225575 . + . ID=gene201;Dbxref=EcoGene:EG30010,GeneID:944890;Name=alaV;gbkey=Gene;gene=alaV;gene_biotype=tRNA;gene_synonym=ECK0203,JWR0003;locus_tag=b0203 NC_000913.3 RefSeq tRNA 225500 225575 . + . ID=rna5;Parent=gene201;Dbxref=ASAP:ABE-0000682,EcoGene:EG30010,GeneID:944890;Note=anticodon: UGC;gbkey=tRNA;gene=alaV;product=tRNA-Ala NC_000913.3 RefSeq exon 225500 225575 . + . ID=id24;Parent=rna5;Dbxref=ASAP:ABE-0000682,EcoGene:EG30010,GeneID:944890;Note=anticodon: UGC;gbkey=tRNA;gene=alaV;product=tRNA-Ala NC_000913.3 RefSeq gene 225759 228662 . + . ID=gene202;Dbxref=EcoGene:EG30083,GeneID:944900;Name=rrlH;gbkey=Gene;gene=rrlH;gene_biotype=rRNA;gene_synonym=ECK0204,JWR0004;locus_tag=b0204 NC_000913.3 RefSeq rRNA 225759 228662 . + . ID=rna6;Parent=gene202;Dbxref=ASAP:ABE-0000684,EcoGene:EG30083,GeneID:944900;gbkey=rRNA;gene=rrlH;product=23S ribosomal RNA of rrnH operon NC_000913.3 RefSeq exon 225759 228662 . + . ID=id25;Parent=rna6;Dbxref=ASAP:ABE-0000684,EcoGene:EG30083,GeneID:944900;gbkey=rRNA;gene=rrlH;product=23S ribosomal RNA of rrnH operon NC_000913.3 RefSeq gene 228756 228875 . + . ID=gene203;Dbxref=EcoGene:EG30076,GeneID:944898;Name=rrfH;gbkey=Gene;gene=rrfH;gene_biotype=rRNA;gene_synonym=ECK0205,JWR0005;locus_tag=b0205 NC_000913.3 RefSeq rRNA 228756 228875 . + . ID=rna7;Parent=gene203;Dbxref=ASAP:ABE-0000686,EcoGene:EG30076,GeneID:944898;gbkey=rRNA;gene=rrfH;product=5S ribosomal RNA of rrnH operon NC_000913.3 RefSeq exon 228756 228875 . + . ID=id26;Parent=rna7;Dbxref=ASAP:ABE-0000686,EcoGene:EG30076,GeneID:944898;gbkey=rRNA;gene=rrfH;product=5S ribosomal RNA of rrnH operon NC_000913.3 RefSeq gene 228928 229004 . + . ID=gene204;Dbxref=EcoGene:EG30024,GeneID:944880;Name=aspU;gbkey=Gene;gene=aspU;gene_biotype=tRNA;gene_synonym=ECK0206,JWR0006;locus_tag=b0206 NC_000913.3 RefSeq tRNA 228928 229004 . + . ID=rna8;Parent=gene204;Dbxref=ASAP:ABE-0000688,EcoGene:EG30024,GeneID:944880;Note=anticodon: GUC;gbkey=tRNA;gene=aspU;product=tRNA-Asp NC_000913.3 RefSeq exon 228928 229004 . + . ID=id27;Parent=rna8;Dbxref=ASAP:ABE-0000688,EcoGene:EG30024,GeneID:944880;Note=anticodon: GUC;gbkey=tRNA;gene=aspU;product=tRNA-Asp NC_000913.3 RefSeq gene 229167 229970 . + . ID=gene205;Dbxref=EcoGene:EG11648,GeneID:944901;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;gene_synonym=ECK0207,JW0197,yafB;locus_tag=b0207 NC_000913.3 RefSeq CDS 229167 229970 . + 0 ID=cds196;Parent=gene205;Dbxref=ASAP:ABE-0000692,UniProtKB/Swiss-Prot:P30863,Genbank:NP_414743.1,EcoGene:EG11648,GeneID:944901;Name=NP_414743.1;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconate reductase B;protein_id=NP_414743.1;transl_table=11 NC_000913.3 RefSeq gene 229967 230881 . - . ID=gene206;Dbxref=EcoGene:EG11649,GeneID:947507;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;gene_synonym=ECK0208,JW0198;locus_tag=b0208 NC_000913.3 RefSeq CDS 229967 230881 . - 0 ID=cds197;Parent=gene206;Dbxref=ASAP:ABE-0000694,UniProtKB/Swiss-Prot:P30864,Genbank:NP_414744.1,EcoGene:EG11649,GeneID:947507;Name=NP_414744.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yafC;product=LysR family putative transcriptional regulator;protein_id=NP_414744.1;transl_table=11 NC_000913.3 RefSeq gene 231122 231922 . + . ID=gene207;Dbxref=EcoGene:EG11650,GeneID:946286;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;gene_synonym=ECK0209,JW5017;locus_tag=b0209 NC_000913.3 RefSeq CDS 231122 231922 . + 0 ID=cds198;Parent=gene207;Dbxref=ASAP:ABE-0000700,UniProtKB/Swiss-Prot:P0A8U2,Genbank:NP_414745.1,EcoGene:EG11650,GeneID:946286;Name=NP_414745.1;gbkey=CDS;gene=yafD;product=endo/exonuclease/phosphatase family protein;protein_id=NP_414745.1;transl_table=11 NC_000913.3 RefSeq gene 231926 232549 . + . ID=gene208;Dbxref=EcoGene:EG11651,GeneID:946197;Name=yafE;gbkey=Gene;gene=yafE;gene_biotype=protein_coding;gene_synonym=ECK0210,JW0200;locus_tag=b0210 NC_000913.3 RefSeq CDS 231926 232549 . + 0 ID=cds199;Parent=gene208;Dbxref=ASAP:ABE-0000702,UniProtKB/Swiss-Prot:P30866,Genbank:NP_414746.1,EcoGene:EG11651,GeneID:946197;Name=NP_414746.1;Note=putative biotin synthesis protein;gbkey=CDS;gene=yafE;product=putative S-adenosyl-L-methionine-dependent methyltransferase;protein_id=NP_414746.1;transl_table=11 NC_000913.3 RefSeq gene 232597 233955 . - . ID=gene209;Dbxref=EcoGene:EG10246,GeneID:945694;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,ECK0211,JW5018,yafG;locus_tag=b0211 NC_000913.3 RefSeq CDS 232597 233955 . - 0 ID=cds200;Parent=gene209;Dbxref=ASAP:ABE-0000704,UniProtKB/Swiss-Prot:P0AEZ7,Genbank:NP_414747.1,EcoGene:EG10246,GeneID:945694;Name=NP_414747.1;gbkey=CDS;gene=mltD;product=putative membrane-bound lytic murein transglycosylase D;protein_id=NP_414747.1;transl_table=11 NC_000913.3 RefSeq gene 234027 234782 . - . ID=gene210;Dbxref=EcoGene:EG13330,GeneID:944902;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;gene_synonym=ECK0212,JW0202,yafR;locus_tag=b0212 NC_000913.3 RefSeq CDS 234027 234782 . - 0 ID=cds201;Parent=gene210;Dbxref=ASAP:ABE-0000707,UniProtKB/Swiss-Prot:P0AC84,Genbank:NP_414748.1,EcoGene:EG13330,GeneID:944902;Name=NP_414748.1;Note=probable hydroxyacylglutathione hydrolase;gbkey=CDS;gene=gloB;product=hydroxyacylglutathione hydrolase;protein_id=NP_414748.1;transl_table=11 NC_000913.3 RefSeq gene 234816 235538 . + . ID=gene211;Dbxref=EcoGene:EG13331,GeneID:944903;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;gene_synonym=ECK0213,JW0203;locus_tag=b0213 NC_000913.3 RefSeq CDS 234816 235538 . + 0 ID=cds202;Parent=gene211;Dbxref=ASAP:ABE-0000713,UniProtKB/Swiss-Prot:P75672,Genbank:NP_414749.2,EcoGene:EG13331,GeneID:944903;Name=NP_414749.2;gbkey=CDS;gene=yafS;product=putative S-adenosyl-L-methionine-dependent methyltransferase;protein_id=NP_414749.2;transl_table=11 NC_000913.3 RefSeq gene 235535 236002 . - . ID=gene212;Dbxref=EcoGene:EG10860,GeneID:946955;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;gene_synonym=cer,dasF,ECK0214,herA,JW0204,rnh,sdrA,sin;locus_tag=b0214 NC_000913.3 RefSeq CDS 235535 236002 . - 0 ID=cds203;Parent=gene212;Dbxref=ASAP:ABE-0000717,UniProtKB/Swiss-Prot:P0A7Y4,Genbank:NP_414750.1,EcoGene:EG10860,GeneID:946955;Name=NP_414750.1;Note=RNase HI%2C degrades RNA of DNA-RNA hybrids%2C participates in DNA replication;gbkey=CDS;gene=rnhA;product=ribonuclease HI%2C degrades RNA of DNA-RNA hybrids;protein_id=NP_414750.1;transl_table=11 NC_000913.3 RefSeq gene 236067 236798 . + . ID=gene213;Dbxref=EcoGene:EG10243,GeneID:946441;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;gene_synonym=ECK0215,JW0205,mutD;locus_tag=b0215 NC_000913.3 RefSeq CDS 236067 236798 . + 0 ID=cds204;Parent=gene213;Dbxref=ASAP:ABE-0000722,UniProtKB/Swiss-Prot:P03007,Genbank:NP_414751.1,EcoGene:EG10243,GeneID:946441;Name=NP_414751.1;Note=DNA polymerase III%2C epsilon subunit;gbkey=CDS;gene=dnaQ;product=DNA polymerase III epsilon subunit;protein_id=NP_414751.1;transl_table=11 NC_000913.3 RefSeq gene 236931 237007 . + . ID=gene214;Dbxref=EcoGene:EG30025,GeneID:947541;Name=aspV;gbkey=Gene;gene=aspV;gene_biotype=tRNA;gene_synonym=ECK0216,JWR0007;locus_tag=b0216 NC_000913.3 RefSeq tRNA 236931 237007 . + . ID=rna9;Parent=gene214;Dbxref=ASAP:ABE-0000724,EcoGene:EG30025,GeneID:947541;Note=anticodon: GUC;gbkey=tRNA;gene=aspV;product=tRNA-Asp NC_000913.3 RefSeq exon 236931 237007 . + . ID=id28;Parent=rna9;Dbxref=ASAP:ABE-0000724,EcoGene:EG30025,GeneID:947541;Note=anticodon: GUC;gbkey=tRNA;gene=aspV;product=tRNA-Asp NC_000913.3 RefSeq gene 237335 238120 . + . ID=gene215;Dbxref=EcoGene:EG13332,GeneID:949009;Name=yafT;gbkey=Gene;gene=yafT;gene_biotype=protein_coding;gene_synonym=ECK0217,JW0206;locus_tag=b0217 NC_000913.3 RefSeq CDS 237335 238120 . + 0 ID=cds205;Parent=gene215;Dbxref=ASAP:ABE-0000727,UniProtKB/Swiss-Prot:P77339,Genbank:NP_414752.1,EcoGene:EG13332,GeneID:949009;Name=NP_414752.1;Note=putative aminopeptidase;gbkey=CDS;gene=yafT;product=lipoprotein;protein_id=NP_414752.1;transl_table=11 NC_000913.3 RefSeq gene 238257 238736 . - . ID=gene216;Dbxref=EcoGene:EG14451,GeneID:5061498;Name=ykfM;gbkey=Gene;gene=ykfM;gene_biotype=protein_coding;gene_synonym=ECK4397;locus_tag=b4586 NC_000913.3 RefSeq CDS 238257 238736 . - 0 ID=cds206;Parent=gene216;Dbxref=UniProtKB/Swiss-Prot:A5A605,Genbank:YP_001165307.1,EcoGene:EG14451,GeneID:5061498;Name=YP_001165307.1;gbkey=CDS;gene=ykfM;product=lethality reduction protein%2C putative inner membrane protein;protein_id=YP_001165307.1;transl_table=11 NC_000913.3 RefSeq gene 238746 239102 . - . ID=gene217;Dbxref=EcoGene:EG13333,GeneID:946644;Name=yafU;gbkey=Gene;gene=yafU;gene_biotype=pseudogene;gene_synonym=ECK0218,JW0207;locus_tag=b0218;pseudo=true NC_000913.3 RefSeq CDS 238746 239102 . - 0 ID=cds207;Parent=gene217;Dbxref=ASAP:ABE-0000729,UniProtKB/Swiss-Prot:P77354,EcoGene:EG13333,GeneID:946644;Note=pseudogene;gbkey=CDS;gene=yafU;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 239106 239378 . + . ID=gene218;Dbxref=EcoGene:EG11772,GeneID:1450235;Name=yafF;gbkey=Gene;gene=yafF;gene_biotype=pseudogene;gene_synonym=ECK0219,JW0208;locus_tag=b4503;pseudo=true NC_000913.3 RefSeq CDS 239106 239378 . + 0 ID=cds208;Parent=gene218;Dbxref=ASAP:ABE-0285024,UniProtKB/Swiss-Prot:Q2EEP9,EcoGene:EG11772,GeneID:1450235;Note=pseudogene%2C H repeat-associated protein;gbkey=CDS;gene=yafF;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 239419 240189 . - . ID=gene219;Dbxref=EcoGene:EG13334,GeneID:946585;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;gene_synonym=ECK0220,JW5019;locus_tag=b0219 NC_000913.3 RefSeq CDS 239419 240189 . - 0 ID=cds209;Parent=gene219;Dbxref=ASAP:ABE-0000734,UniProtKB/Swiss-Prot:Q47679,Genbank:NP_414754.1,EcoGene:EG13334,GeneID:946585;Name=NP_414754.1;Note=putative EC 3.5. amidase-type enzyme;gbkey=CDS;gene=yafV;product=putative NAD(P)-binding C-N hydrolase family amidase;protein_id=NP_414754.1;transl_table=11 NC_000913.3 RefSeq gene 240343 240816 . + . ID=gene220;Dbxref=EcoGene:EG13547,GeneID:946530;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;gene_synonym=ECK0221,JW0210,ykfE;locus_tag=b0220 NC_000913.3 RefSeq CDS 240343 240816 . + 0 ID=cds210;Parent=gene220;Dbxref=ASAP:ABE-0000740,UniProtKB/Swiss-Prot:P0AD59,Genbank:NP_414755.1,EcoGene:EG13547,GeneID:946530;Name=NP_414755.1;Note=inhibitor of vertebrate C-type lysozyme%2C periplasmic;gbkey=CDS;gene=ivy;product=inhibitor of c-type lysozyme%2C periplasmic;protein_id=NP_414755.1;transl_table=11 NC_000913.3 RefSeq gene 240859 243303 . - . ID=gene221;Dbxref=EcoGene:EG13145,GeneID:949007;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;gene_synonym=ECK0222,fadF,JW5020,yafH;locus_tag=b0221 NC_000913.3 RefSeq CDS 240859 243303 . - 0 ID=cds211;Parent=gene221;Dbxref=ASAP:ABE-0000743,UniProtKB/Swiss-Prot:Q47146,Genbank:NP_414756.2,EcoGene:EG13145,GeneID:949007;Name=NP_414756.2;gbkey=CDS;gene=fadE;product=acyl coenzyme A dehydrogenase;protein_id=NP_414756.2;transl_table=11 NC_000913.3 RefSeq gene 243543 244121 . + . ID=gene222;Dbxref=EcoGene:EG13146,GeneID:949134;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;gene_synonym=ECK0223,isn,JW0212,lpcA,tfrA,yafI;locus_tag=b0222 NC_000913.3 RefSeq CDS 243543 244121 . + 0 ID=cds212;Parent=gene222;Dbxref=ASAP:ABE-0000751,UniProtKB/Swiss-Prot:P63224,Genbank:NP_414757.1,EcoGene:EG13146,GeneID:949134;Name=NP_414757.1;Note=phosphoheptose isomerase;gbkey=CDS;gene=gmhA;product=D-sedoheptulose 7-phosphate isomerase;protein_id=NP_414757.1;transl_table=11 NC_000913.3 RefSeq repeat_region 244129 244263 . + . ID=id29;Note=REP17 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 244327 245094 . + . ID=gene223;Dbxref=EcoGene:EG13147,GeneID:944906;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;gene_synonym=ECK0224,JW0213;locus_tag=b0223 NC_000913.3 RefSeq CDS 244327 245094 . + 0 ID=cds213;Parent=gene223;Dbxref=ASAP:ABE-0000755,UniProtKB/Swiss-Prot:Q47147,Genbank:NP_414758.1,EcoGene:EG13147,GeneID:944906;Name=NP_414758.1;Note=putative amidotransferase;gbkey=CDS;gene=yafJ;product=type 2 glutamine amidotransferase family protein;protein_id=NP_414758.1;transl_table=11 NC_000913.3 RefSeq gene 245065 245805 . - . ID=gene224;Dbxref=EcoGene:EG13148,GeneID:944910;Name=yafK;gbkey=Gene;gene=yafK;gene_biotype=protein_coding;gene_synonym=ECK0225,JW0214;locus_tag=b0224 NC_000913.3 RefSeq CDS 245065 245805 . - 0 ID=cds214;Parent=gene224;Dbxref=ASAP:ABE-0000757,UniProtKB/Swiss-Prot:P0AA99,Genbank:NP_414759.1,EcoGene:EG13148,GeneID:944910;Name=NP_414759.1;gbkey=CDS;gene=yafK;product=L%2CD-transpeptidase-related protein;protein_id=NP_414759.1;transl_table=11 NC_000913.3 RefSeq gene 245961 246239 . - . ID=gene225;Dbxref=EcoGene:EG13154,GeneID:944911;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;gene_synonym=ECK0226,JW0215;locus_tag=b0225 NC_000913.3 RefSeq CDS 245961 246239 . - 0 ID=cds215;Parent=gene225;Dbxref=ASAP:ABE-0000761,UniProtKB/Swiss-Prot:Q47149,Genbank:NP_414760.1,EcoGene:EG13154,GeneID:944911;Name=NP_414760.1;gbkey=CDS;gene=yafQ;product=mRNA interferase toxin of toxin-antitoxin pair YafQ/DinJ;protein_id=NP_414760.1;transl_table=11 NC_000913.3 RefSeq gene 246242 246502 . - . ID=gene226;Dbxref=EcoGene:EG13142,GeneID:944914;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;gene_synonym=ECK0227,JW0216,sosA;locus_tag=b0226 NC_000913.3 RefSeq CDS 246242 246502 . - 0 ID=cds216;Parent=gene226;Dbxref=ASAP:ABE-0000764,UniProtKB/Swiss-Prot:Q47150,Genbank:NP_414761.1,EcoGene:EG13142,GeneID:944914;Name=NP_414761.1;Note=damage-inducible protein J;gbkey=CDS;gene=dinJ;product=antitoxin of YafQ-DinJ toxin-antitoxin system;protein_id=NP_414761.1;transl_table=11 NC_000913.3 RefSeq gene 246712 247461 . + . ID=gene227;Dbxref=EcoGene:EG13149,GeneID:944899;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;gene_synonym=ECK0228,JW0217;locus_tag=b0227 NC_000913.3 RefSeq CDS 246712 247461 . + 0 ID=cds217;Parent=gene227;Dbxref=ASAP:ABE-0000775,UniProtKB/Swiss-Prot:Q47151,Genbank:NP_414762.1,EcoGene:EG13149,GeneID:944899;Name=NP_414762.1;Note=putative lipoprotein;gbkey=CDS;gene=yafL;product=putative lipoprotein and C40 family peptidase;protein_id=NP_414762.1;transl_table=11 NC_000913.3 RefSeq repeat_region 247458 247541 . + . ID=id30;Note=REP18 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region;gene=yafL NC_000913.3 RefSeq gene 247637 248134 . + . ID=gene228;Dbxref=EcoGene:EG13150,GeneID:944913;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;gene_synonym=ECK0229,JW0218,tnpAREP,yafM;locus_tag=b0228 NC_000913.3 RefSeq CDS 247637 248134 . + 0 ID=cds218;Parent=gene228;Dbxref=ASAP:ABE-0000779,UniProtKB/Swiss-Prot:Q47152,Genbank:NP_414763.1,EcoGene:EG13150,GeneID:944913;Name=NP_414763.1;gbkey=CDS;gene=rayT;product=RAYT REP element-mobilizing transposase%3B TnpA(REP);protein_id=NP_414763.1;transl_table=11 NC_000913.3 RefSeq repeat_region 248147 248334 . + . ID=id31;Note=REP19 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 248358 250070 . - . ID=gene229;Dbxref=EcoGene:EG13144,GeneID:944908;Name=lfhA;gbkey=Gene;gene=lfhA;gene_biotype=pseudogene;gene_synonym=ECK0230,fhiA,JW5811;locus_tag=b0229;pseudo=true NC_000913.3 RefSeq CDS 248358 250070 . - 0 ID=cds219;Parent=gene229;Dbxref=ASAP:ABE-0000782,UniProtKB/Swiss-Prot:Q47153,EcoGene:EG13144,GeneID:944908;Note=pseudogene%2C flagellar system protein%2C promoterless fragment~flagellar biosynthesis;gbkey=CDS;gene=lfhA;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 250072 250827 . + . ID=gene230;Dbxref=EcoGene:EG13143,GeneID:944921;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=pseudogene;gene_synonym=ECK0231,JW5812,mbhA;locus_tag=b0230;pseudo=true NC_000913.3 RefSeq CDS 250072 250827 . + 0 ID=cds220;Parent=gene230;Dbxref=ASAP:ABE-0000785,UniProtKB/Swiss-Prot:Q47154,EcoGene:EG13143,GeneID:944921;Note=pseudogene%2C lateral flagellar motor protein fragment;gbkey=CDS;gene=lafU;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 250898 251953 . + . ID=gene231;Dbxref=EcoGene:EG13141,GeneID:944922;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;gene_synonym=dinP,ECK0232,JW0221;locus_tag=b0231 NC_000913.3 RefSeq CDS 250898 251953 . + 0 ID=cds221;Parent=gene231;Dbxref=ASAP:ABE-0000789,UniProtKB/Swiss-Prot:Q47155,Genbank:NP_414766.1,EcoGene:EG13141,GeneID:944922;Name=NP_414766.1;Note=DNA polymerase IV~DNA polymerase IV%2C devoid of proofreading%2C damage-inducible protein P;gbkey=CDS;gene=dinB;product=DNA polymerase IV;protein_id=NP_414766.1;transl_table=11 NC_000913.3 RefSeq gene 252005 252298 . + . ID=gene232;Dbxref=EcoGene:EG13151,GeneID:944920;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;gene_synonym=ECK0233,JW0222;locus_tag=b0232 NC_000913.3 RefSeq CDS 252005 252298 . + 0 ID=cds222;Parent=gene232;Dbxref=ASAP:ABE-0000793,UniProtKB/Swiss-Prot:Q47156,Genbank:NP_414767.1,EcoGene:EG13151,GeneID:944920;Name=NP_414767.1;gbkey=CDS;gene=yafN;product=antitoxin of the YafO-YafN toxin-antitoxin system;protein_id=NP_414767.1;transl_table=11 NC_000913.3 RefSeq gene 252301 252699 . + . ID=gene233;Dbxref=EcoGene:EG13152,GeneID:944916;Name=yafO;gbkey=Gene;gene=yafO;gene_biotype=protein_coding;gene_synonym=ECK0234,JW0223;locus_tag=b0233 NC_000913.3 RefSeq CDS 252301 252699 . + 0 ID=cds223;Parent=gene233;Dbxref=ASAP:ABE-0000795,UniProtKB/Swiss-Prot:Q47157,Genbank:NP_414768.1,EcoGene:EG13152,GeneID:944916;Name=NP_414768.1;gbkey=CDS;gene=yafO;product=mRNA interferase toxin of the YafO-YafN toxin-antitoxin system;protein_id=NP_414768.1;transl_table=11 NC_000913.3 RefSeq gene 252709 253161 . + . ID=gene234;Dbxref=EcoGene:EG13153,GeneID:944912;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;gene_synonym=ECK0235,JW0224;locus_tag=b0234 NC_000913.3 RefSeq CDS 252709 253161 . + 0 ID=cds224;Parent=gene234;Dbxref=ASAP:ABE-0000801,UniProtKB/Swiss-Prot:Q47158,Genbank:NP_414769.1,EcoGene:EG13153,GeneID:944912;Name=NP_414769.1;gbkey=CDS;gene=yafP;product=GNAT family putative N-acetyltransferase;protein_id=NP_414769.1;transl_table=11 NC_000913.3 RefSeq gene 253479 253685 . + . ID=gene235;Dbxref=EcoGene:EG14368,GeneID:944924;Name=ykfJ;gbkey=Gene;gene=ykfJ;gene_biotype=pseudogene;gene_synonym=ECK0236,JW0225;locus_tag=b0235;pseudo=true NC_000913.3 RefSeq CDS 253479 253685 . + 0 ID=cds225;Parent=gene235;Dbxref=ASAP:ABE-0000805,UniProtKB/Swiss-Prot:P75675,EcoGene:EG14368,GeneID:944924;Note=pseudogene;gbkey=CDS;gene=ykfJ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 253702 254202 . + . ID=gene236;Dbxref=EcoGene:EG11496,GeneID:947374;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=pseudogene;gene_synonym=ECK0237,JW0226;locus_tag=b0236;pseudo=true NC_000913.3 RefSeq CDS 253702 254202 . + 0 ID=cds226;Parent=gene236;Dbxref=ASAP:ABE-0000807,UniProtKB/Swiss-Prot:P28369,EcoGene:EG11496,GeneID:947374;Note=pseudogene%2C RF-1 domain family~probable peptide chain release factor;gbkey=CDS;gene=prfH;pseudo=true;transl_table=11 NC_000913.3 RefSeq repeat_region 254217 254244 . + . ID=id32;Note=REP20 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 254259 255716 . - . ID=gene237;Dbxref=EcoGene:EG10695,GeneID:945013;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;gene_synonym=ECK0238,JW0227,pepH;locus_tag=b0237 NC_000913.3 RefSeq CDS 254259 255716 . - 0 ID=cds227;Parent=gene237;Dbxref=ASAP:ABE-0000809,UniProtKB/Swiss-Prot:P15288,Genbank:NP_414772.1,EcoGene:EG10695,GeneID:945013;Name=NP_414772.1;gbkey=CDS;gene=pepD;product=aminoacyl-histidine dipeptidase (peptidase D);protein_id=NP_414772.1;transl_table=11 NC_000913.3 RefSeq gene 255977 256435 . + . ID=gene238;Dbxref=EcoGene:EG10414,GeneID:944817;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;gene_synonym=ECK0239,gpp,gxu,JW0228;locus_tag=b0238 NC_000913.3 RefSeq CDS 255977 256435 . + 0 ID=cds228;Parent=gene238;Dbxref=ASAP:ABE-0000814,UniProtKB/Swiss-Prot:P0A9M5,Genbank:NP_414773.1,EcoGene:EG10414,GeneID:944817;Name=NP_414773.1;gbkey=CDS;gene=gpt;product=xanthine phosphoribosyltransferase%3B xanthine-guanine phosphoribosyltransferase;protein_id=NP_414773.1;transl_table=11 NC_000913.3 RefSeq gene 256527 257771 . + . ID=gene239;Dbxref=EcoGene:EG11091,GeneID:946039;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;gene_synonym=ECK0240,JW0229,yafA;locus_tag=b0239 NC_000913.3 RefSeq CDS 256527 257771 . + 0 ID=cds229;Parent=gene239;Dbxref=ASAP:ABE-0000817,UniProtKB/Swiss-Prot:P04335,Genbank:NP_414774.1,EcoGene:EG11091,GeneID:946039;Name=NP_414774.1;gbkey=CDS;gene=frsA;product=fermentation-respiration switch protein%3B PTS Enzyme IIA(Glc)-binding protein%3B pNP-butyrate esterase activity;protein_id=NP_414774.1;transl_table=11 NC_000913.3 RefSeq gene 257829 257899 . + . ID=gene240;Dbxref=EcoGene:EG11092,GeneID:945077;Name=crl;gbkey=Gene;gene=crl;gene_biotype=pseudogene;gene_synonym=ECK0241,JW0230;locus_tag=b0240;part=1/2;pseudo=true NC_000913.3 RefSeq gene 258676 259006 . + . ID=gene240;Dbxref=EcoGene:EG11092,GeneID:945077;Name=crl;gbkey=Gene;gene=crl;gene_biotype=pseudogene;gene_synonym=ECK0241,JW0230;locus_tag=b0240;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 257829 257899 . + 0 ID=cds230;Parent=gene240;Dbxref=ASAP:ABE-0000821,UniProtKB/Swiss-Prot:P24251,EcoGene:EG11092,GeneID:945077;Note=pseudogene%2C sigma factor-binding protein%2C RNA polymerase holoenzyme formation stimulator%3Bregulator%3B Surface structures~transcriptional regulator of cryptic csgA gene for curli surface fibers;gbkey=CDS;gene=crl;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 258676 259006 . + 1 ID=cds230;Parent=gene240;Dbxref=ASAP:ABE-0000821,UniProtKB/Swiss-Prot:P24251,EcoGene:EG11092,GeneID:945077;Note=pseudogene%2C sigma factor-binding protein%2C RNA polymerase holoenzyme formation stimulator%3Bregulator%3B Surface structures~transcriptional regulator of cryptic csgA gene for curli surface fibers;gbkey=CDS;gene=crl;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 257908 258675 . - . ID=id33;gbkey=mobile_element NC_000913.3 RefSeq repeat_region 259016 259036 . + . ID=id34;Note=REP21 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 259045 260100 . - . ID=gene241;Dbxref=EcoGene:EG10729,GeneID:944926;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;gene_synonym=ECK0242,JW0231,ompE;locus_tag=b0241 NC_000913.3 RefSeq CDS 259045 260100 . - 0 ID=cds231;Parent=gene241;Dbxref=ASAP:ABE-0000823,UniProtKB/Swiss-Prot:P02932,Genbank:NP_414776.1,EcoGene:EG10729,GeneID:944926;Name=NP_414776.1;Note=outer membrane pore protein E (E%2CIc%2CNmpAB);gbkey=CDS;gene=phoE;product=outer membrane phosphoporin protein E;protein_id=NP_414776.1;transl_table=11 NC_000913.3 RefSeq gene 260388 261491 . + . ID=gene242;Dbxref=EcoGene:EG10768,GeneID:946425;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;gene_synonym=ECK0243,JW0232,pro;locus_tag=b0242 NC_000913.3 RefSeq CDS 260388 261491 . + 0 ID=cds232;Parent=gene242;Dbxref=ASAP:ABE-0000830,UniProtKB/Swiss-Prot:P0A7B5,Genbank:NP_414777.1,EcoGene:EG10768,GeneID:946425;Name=NP_414777.1;gbkey=CDS;gene=proB;product=gamma-glutamate kinase;protein_id=NP_414777.1;transl_table=11 NC_000913.3 RefSeq gene 261503 262756 . + . ID=gene243;Dbxref=EcoGene:EG10767,GeneID:946680;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;gene_synonym=ECK0244,JW0233,pro;locus_tag=b0243 NC_000913.3 RefSeq CDS 261503 262756 . + 0 ID=cds233;Parent=gene243;Dbxref=ASAP:ABE-0000832,UniProtKB/Swiss-Prot:P07004,Genbank:NP_414778.1,EcoGene:EG10767,GeneID:946680;Name=NP_414778.1;gbkey=CDS;gene=proA;product=gamma-glutamylphosphate reductase;protein_id=NP_414778.1;transl_table=11 NC_000913.3 RefSeq gene 262871 262946 . + . ID=gene244;Dbxref=EcoGene:EG30104,GeneID:947202;Name=thrW;gbkey=Gene;gene=thrW;gene_biotype=tRNA;gene_synonym=ECK0245,JWR0008;locus_tag=b0244 NC_000913.3 RefSeq tRNA 262871 262946 . + . ID=rna10;Parent=gene244;Dbxref=ASAP:ABE-0000834,EcoGene:EG30104,GeneID:947202;Note=anticodon: CGU;gbkey=tRNA;gene=thrW;product=tRNA-Thr NC_000913.3 RefSeq exon 262871 262946 . + . ID=id35;Parent=rna10;Dbxref=ASAP:ABE-0000834,EcoGene:EG30104,GeneID:947202;Note=anticodon: CGU;gbkey=tRNA;gene=thrW;product=tRNA-Thr NC_000913.3 RefSeq region 262958 297265 . + . ID=id36;Note=cryptic prophage CP4-6;gbkey=misc_feature NC_000913.3 RefSeq gene 263150 263212 . - . ID=gene245;Dbxref=EcoGene:EG14454,GeneID:5625552;Name=ykfN;gbkey=Gene;gene=ykfN;gene_biotype=pseudogene;gene_synonym=ECK4458;locus_tag=b4626;pseudo=true NC_000913.3 RefSeq CDS 263150 263212 . - 0 ID=cds234;Parent=gene245;Dbxref=EcoGene:EG14454,GeneID:5625552;Note=pseudogene%2C YdiA family;gbkey=CDS;gene=ykfN;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 263328 263669 . - . ID=gene246;Dbxref=EcoGene:EG14333,GeneID:946726;Name=ykfI;gbkey=Gene;gene=ykfI;gene_biotype=protein_coding;gene_synonym=ECK0246,JW0234;locus_tag=b0245 NC_000913.3 RefSeq CDS 263328 263669 . - 0 ID=cds235;Parent=gene246;Dbxref=ASAP:ABE-0000836,UniProtKB/Swiss-Prot:P77692,Genbank:NP_414779.1,EcoGene:EG14333,GeneID:946726;Name=NP_414779.1;gbkey=CDS;gene=ykfI;product=CP4-6 prophage%3B toxin of the YkfI-YafW toxin-antitoxin system;protein_id=NP_414779.1;transl_table=11 NC_000913.3 RefSeq gene 263690 264007 . - . ID=gene247;Dbxref=EcoGene:EG13335,GeneID:944929;Name=yafW;gbkey=Gene;gene=yafW;gene_biotype=protein_coding;gene_synonym=ECK0247,JW0235;locus_tag=b0246 NC_000913.3 RefSeq CDS 263690 264007 . - 0 ID=cds236;Parent=gene247;Dbxref=ASAP:ABE-0000838,UniProtKB/Swiss-Prot:Q47684,Genbank:NP_414780.1,EcoGene:EG13335,GeneID:944929;Name=NP_414780.1;gbkey=CDS;gene=yafW;product=CP4-6 prophage%3B antitoxin of the YkfI-YafW toxin-antitoxin system;protein_id=NP_414780.1;transl_table=11 NC_000913.3 RefSeq gene 264026 264247 . - . ID=gene248;Dbxref=EcoGene:EG14332,GeneID:1450236;Name=ykfH;gbkey=Gene;gene=ykfH;gene_biotype=protein_coding;gene_synonym=ECK0248,JW5956;locus_tag=b4504 NC_000913.3 RefSeq CDS 264026 264247 . - 0 ID=cds237;Parent=gene248;Dbxref=ASAP:ABE-0285025,UniProtKB/Swiss-Prot:Q9XB42,Genbank:YP_588435.1,EcoGene:EG14332,GeneID:1450236;Name=YP_588435.1;gbkey=CDS;gene=ykfH;product=uncharacterized protein;protein_id=YP_588435.1;transl_table=11 NC_000913.3 RefSeq gene 264256 264732 . - . ID=gene249;Dbxref=EcoGene:EG14331,GeneID:944930;Name=ykfG;gbkey=Gene;gene=ykfG;gene_biotype=protein_coding;gene_synonym=ECK0249,JW0236;locus_tag=b0247 NC_000913.3 RefSeq CDS 264256 264732 . - 0 ID=cds238;Parent=gene249;Dbxref=ASAP:ABE-0000841,UniProtKB/Swiss-Prot:Q47685,Genbank:NP_414781.1,EcoGene:EG14331,GeneID:944930;Name=NP_414781.1;Note=putative DNA repair protein;gbkey=CDS;gene=ykfG;product=CP4-6 prophage%3B RadC-like JAB domain protein;protein_id=NP_414781.1;transl_table=11 NC_000913.3 RefSeq gene 264748 265206 . - . ID=gene250;Dbxref=EcoGene:EG13336,GeneID:944931;Name=yafX;gbkey=Gene;gene=yafX;gene_biotype=protein_coding;gene_synonym=ECK0250,JW5022;locus_tag=b0248 NC_000913.3 RefSeq CDS 264748 265206 . - 0 ID=cds239;Parent=gene250;Dbxref=ASAP:ABE-0000843,UniProtKB/Swiss-Prot:P75676,Genbank:NP_414782.1,EcoGene:EG13336,GeneID:944931;Name=NP_414782.1;gbkey=CDS;gene=yafX;product=CP4-6 prophage%3B uncharacterized protein;protein_id=NP_414782.1;transl_table=11 NC_000913.3 RefSeq gene 265304 265543 . - . ID=gene251;Dbxref=EcoGene:EG14283,GeneID:948839;Name=ykfF;gbkey=Gene;gene=ykfF;gene_biotype=protein_coding;gene_synonym=ECK0251,JW5023;locus_tag=b0249 NC_000913.3 RefSeq CDS 265304 265543 . - 0 ID=cds240;Parent=gene251;Dbxref=ASAP:ABE-0000846,UniProtKB/Swiss-Prot:P75677,Genbank:NP_414783.1,EcoGene:EG14283,GeneID:948839;Name=NP_414783.1;gbkey=CDS;gene=ykfF;product=CP4-6 prophage%3B uncharacterized protein;protein_id=NP_414783.1;transl_table=11 NC_000913.3 RefSeq gene 265620 266087 . - . ID=gene252;Dbxref=EcoGene:EG13548,GeneID:946846;Name=ykfB;gbkey=Gene;gene=ykfB;gene_biotype=protein_coding;gene_synonym=ECK0252,JW0239;locus_tag=b0250 NC_000913.3 RefSeq CDS 265620 266087 . - 0 ID=cds241;Parent=gene252;Dbxref=ASAP:ABE-0000851,UniProtKB/Swiss-Prot:P77162,Genbank:NP_414784.1,EcoGene:EG13548,GeneID:946846;Name=NP_414784.1;gbkey=CDS;gene=ykfB;product=CP4-6 prophage%3B uncharacterized protein;protein_id=NP_414784.1;transl_table=11 NC_000913.3 RefSeq gene 266110 266553 . - . ID=gene253;Dbxref=EcoGene:EG13337,GeneID:944934;Name=yafY;gbkey=Gene;gene=yafY;gene_biotype=protein_coding;gene_synonym=ECK0253,JW0240;locus_tag=b0251 NC_000913.3 RefSeq CDS 266110 266553 . - 0 ID=cds242;Parent=gene253;Dbxref=ASAP:ABE-0000853,UniProtKB/Swiss-Prot:P77365,Genbank:NP_414785.4,EcoGene:EG13337,GeneID:944934;Name=NP_414785.4;Note=hypothetical transcriptional regulator;gbkey=CDS;gene=yafY;product=lipoprotein%2C inner membrane%3B degP regulator%3B CP4-6 prophage;protein_id=NP_414785.4;transl_table=11 NC_000913.3 RefSeq gene 266553 266774 . - . ID=gene254;Dbxref=EcoGene:EG14378,GeneID:5625553;Name=ykfL;gbkey=Gene;gene=ykfL;gene_biotype=pseudogene;gene_synonym=ECK4445;locus_tag=b4627;pseudo=true NC_000913.3 RefSeq CDS 266553 266774 . - 0 ID=cds243;Parent=gene254;Dbxref=EcoGene:EG14378,GeneID:5625553;Note=pseudogene%2C CP4-6 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=ykfL;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 266776 266967 . - . ID=gene255;Dbxref=EcoGene:EG14377,GeneID:5625554;Name=ykfK;gbkey=Gene;gene=ykfK;gene_biotype=pseudogene;gene_synonym=ECK4444,yafY;locus_tag=b4628;pseudo=true NC_000913.3 RefSeq CDS 266776 266967 . - 0 ID=cds244;Parent=gene255;Dbxref=EcoGene:EG14377,GeneID:5625554;Note=CP4-6 prophage%3B putative DNA-binding transcriptional regulator%3BPhage or Prophage Related;gbkey=CDS;gene=ykfK;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 267184 268005 . - . ID=gene256;Dbxref=EcoGene:EG13338,GeneID:945373;Name=yafZ;gbkey=Gene;gene=yafZ;gene_biotype=protein_coding;gene_synonym=ECK0254,JW0242;locus_tag=b0252 NC_000913.3 RefSeq CDS 267184 268005 . - 0 ID=cds245;Parent=gene256;Dbxref=ASAP:ABE-0000856,UniProtKB/Swiss-Prot:P77206,Genbank:NP_414786.4,EcoGene:EG13338,GeneID:945373;Name=NP_414786.4;gbkey=CDS;gene=yafZ;product=CP4-6 prophage%3B conserved protein;protein_id=NP_414786.4;transl_table=11 NC_000913.3 RefSeq gene 268097 268960 . - . ID=gene257;Dbxref=EcoGene:EG13339,GeneID:949004;Name=ykfA;gbkey=Gene;gene=ykfA;gene_biotype=protein_coding;gene_synonym=ECK0255,JW0243;locus_tag=b0253 NC_000913.3 RefSeq CDS 268097 268960 . - 0 ID=cds246;Parent=gene257;Dbxref=ASAP:ABE-0000858,UniProtKB/Swiss-Prot:P75678,Genbank:NP_414787.4,EcoGene:EG13339,GeneID:949004;Name=NP_414787.4;Note=putative GTP-binding protein;gbkey=CDS;gene=ykfA;product=CP4-6 prophage%3B putative GTP-binding protein;protein_id=NP_414787.4;transl_table=11 NC_000913.3 RefSeq gene 269289 270182 . - . ID=gene258;Dbxref=EcoGene:EG13340,GeneID:945417;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;gene_synonym=ECK0256,JW0244;locus_tag=b0254 NC_000913.3 RefSeq CDS 269289 270182 . - 0 ID=cds247;Parent=gene258;Dbxref=ASAP:ABE-0000862,UniProtKB/Swiss-Prot:Q57083,Genbank:NP_414788.1,EcoGene:EG13340,GeneID:945417;Name=NP_414788.1;Note=peroxide resistance protein;gbkey=CDS;gene=perR;product=CP4-6 prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_414788.1;transl_table=11 NC_000913.3 RefSeq region 270206 270540 . + . ID=id37;gbkey=mobile_element NC_000913.3 RefSeq gene 270278 270535 . + . ID=gene259;Dbxref=EcoGene:EG40014,GeneID:5061501;Name=insN;gbkey=Gene;gene=insN;gene_biotype=pseudogene;gene_synonym=ECK0257,insN1,insO,ORFAB;locus_tag=b4587;part=1/2;pseudo=true NC_000913.3 RefSeq gene 271764 272189 . + . ID=gene259;Dbxref=EcoGene:EG40014,GeneID:5061501;Name=insN;gbkey=Gene;gene=insN;gene_biotype=pseudogene;gene_synonym=ECK0257,insN1,insO,ORFAB;locus_tag=b4587;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 270278 270535 . + 0 ID=cds248;Parent=gene259;Dbxref=ASAP:ABE-0000867,UniProtKB/Swiss-Prot:P75679,EcoGene:EG40014,GeneID:5061501;Note=pseudogene%2C IS911 transposase A%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insN;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 271764 272189 . + 0 ID=cds248;Parent=gene259;Dbxref=ASAP:ABE-0000867,UniProtKB/Swiss-Prot:P75679,EcoGene:EG40014,GeneID:5061501;Note=pseudogene%2C IS911 transposase A%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insN;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 270541 271761 . + . ID=id38;gbkey=mobile_element NC_000913.3 RefSeq gene 270603 271754 . + . ID=gene260;Dbxref=EcoGene:EG40009,GeneID:949005;Name=insI1;gbkey=Gene;gene=insI1;gene_biotype=protein_coding;gene_synonym=ECK0258;locus_tag=b0256 NC_000913.3 RefSeq CDS 270603 271754 . + 0 ID=cds249;Parent=gene260;Dbxref=ASAP:ABE-0000871,UniProtKB/Swiss-Prot:P0CF88,Genbank:NP_414790.1,EcoGene:EG40009,GeneID:949005;Name=NP_414790.1;gbkey=CDS;gene=insI1;product=IS30 transposase;protein_id=NP_414790.1;transl_table=11 NC_000913.3 RefSeq region 271762 272190 . + . ID=id39;gbkey=mobile_element NC_000913.3 RefSeq gene 272580 272654 . + . ID=gene261;Dbxref=EcoGene:EG31183,GeneID:7751631;Name=eyeA;gbkey=Gene;gene=eyeA;gene_biotype=ncRNA;gene_synonym=ECK4506,I001;locus_tag=b4690 NC_000913.3 RefSeq ncRNA 272580 272654 . + . ID=rna11;Parent=gene261;Dbxref=EcoGene:EG31183,GeneID:7751631;gbkey=ncRNA;gene=eyeA;ncrna_class=other;product=novel sRNA%2C function unknown%2C CP4-6 propahge NC_000913.3 RefSeq exon 272580 272654 . + . ID=id40;Parent=rna11;Dbxref=EcoGene:EG31183,GeneID:7751631;gbkey=ncRNA;gene=eyeA;ncrna_class=other;product=novel sRNA%2C function unknown%2C CP4-6 propahge NC_000913.3 RefSeq gene 272847 273954 . + . ID=gene262;Dbxref=EcoGene:EG13341,GeneID:944940;Name=ykfC;gbkey=Gene;gene=ykfC;gene_biotype=pseudogene;gene_synonym=ECK0260,JW5813;locus_tag=b0258;pseudo=true NC_000913.3 RefSeq CDS 272847 273954 . + 0 ID=cds250;Parent=gene262;Dbxref=ASAP:ABE-0000885,UniProtKB/Swiss-Prot:Q47688,EcoGene:EG13341,GeneID:944940;Note=CP4-6 prophage%3B conserved protein%3BPhage or Prophage Related;gbkey=CDS;gene=ykfC;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 273955 275149 . - . ID=id41;gbkey=mobile_element NC_000913.3 RefSeq gene 274101 275117 . - . ID=gene263;Dbxref=EcoGene:EG40008,GeneID:944941;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b0259 NC_000913.3 RefSeq CDS 274101 275117 . - 0 ID=cds251;Parent=gene263;Dbxref=ASAP:ABE-0000888,UniProtKB/Swiss-Prot:P0CE49,Genbank:NP_414793.1,EcoGene:EG40008,GeneID:944941;Name=NP_414793.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_414793.1;transl_table=11 NC_000913.3 RefSeq gene 275325 276728 . + . ID=gene264;Dbxref=EcoGene:EG13342,GeneID:946284;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;gene_synonym=ECK0262,JW5027,ykfD;locus_tag=b0260 NC_000913.3 RefSeq CDS 275325 276728 . + 0 ID=cds252;Parent=gene264;Dbxref=ASAP:ABE-0000893,UniProtKB/Swiss-Prot:Q47689,Genbank:NP_414794.4,EcoGene:EG13342,GeneID:946284;Name=NP_414794.4;gbkey=CDS;gene=mmuP;product=CP4-6 prophage%3B putative S-methylmethionine transporter;protein_id=NP_414794.4;transl_table=11 NC_000913.3 RefSeq gene 276715 277647 . + . ID=gene265;Dbxref=EcoGene:EG13343,GeneID:946143;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;gene_synonym=ECK0263,JW0253,yagD;locus_tag=b0261 NC_000913.3 RefSeq CDS 276715 277647 . + 0 ID=cds253;Parent=gene265;Dbxref=ASAP:ABE-0000895,UniProtKB/Swiss-Prot:Q47690,Genbank:NP_414795.1,EcoGene:EG13343,GeneID:946143;Name=NP_414795.1;gbkey=CDS;gene=mmuM;product=CP4-6 prophage%3B S-methylmethionine:homocysteine methyltransferase;protein_id=NP_414795.1;transl_table=11 NC_000913.3 RefSeq repeat_region 277675 277741 . + . ID=id42;Note=REP22 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 277756 278802 . - . ID=gene266;Dbxref=EcoGene:EG12340,GeneID:947676;Name=afuC;gbkey=Gene;gene=afuC;gene_biotype=protein_coding;gene_synonym=ECK0264,fbpC,JW0254,yagC;locus_tag=b0262 NC_000913.3 RefSeq CDS 277756 278802 . - 0 ID=cds254;Parent=gene266;Dbxref=ASAP:ABE-0000898,UniProtKB/Swiss-Prot:P37009,Genbank:NP_414796.2,EcoGene:EG12340,GeneID:947676;Name=NP_414796.2;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=afuC;product=CP4-6 prophage%3B putative ferric transporter subunit;protein_id=NP_414796.2;transl_table=11 NC_000913.3 RefSeq gene 278814 279161 . - . ID=gene267;Dbxref=EcoGene:EG14277,GeneID:947073;Name=afuB;gbkey=Gene;gene=afuB;gene_biotype=pseudogene;gene_synonym=ECK0265,fbpB,JW0255;locus_tag=b0263;pseudo=true NC_000913.3 RefSeq CDS 278814 279161 . - 0 ID=cds255;Parent=gene267;Dbxref=ASAP:ABE-0000900,UniProtKB/Swiss-Prot:P75681,EcoGene:EG14277,GeneID:947073;Note=pseudogene%2C CP4-6 prophage%3B ferric iron ABC transporter permease gene fragment%3BPhage or Prophage Related;gbkey=CDS;gene=afuB;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 279163 279930 . - . ID=id43;gbkey=mobile_element NC_000913.3 RefSeq gene 279178 279681 . - . ID=gene268;Dbxref=EcoGene:EG40002,GeneID:947698;Name=insB1;gbkey=Gene;gene=insB1;gene_biotype=protein_coding;gene_synonym=ECK0022;locus_tag=b0264 NC_000913.3 RefSeq CDS 279178 279681 . - 0 ID=cds256;Parent=gene268;Dbxref=ASAP:ABE-0000906,UniProtKB/Swiss-Prot:P0CF26,Genbank:NP_414798.1,EcoGene:EG40002,GeneID:947698;Name=NP_414798.1;gbkey=CDS;gene=insB1;product=IS1 transposase B;protein_id=NP_414798.1;transl_table=11 NC_000913.3 RefSeq gene 279600 279875 . - . ID=gene269;Dbxref=EcoGene:EG40001,GeneID:944946;Name=insA;Note=insA2;gbkey=Gene;gene=insA;gene_biotype=protein_coding;gene_synonym=ECK4521;locus_tag=b0265 NC_000913.3 RefSeq CDS 279600 279875 . - 0 ID=cds257;Parent=gene269;Dbxref=ASAP:ABE-0000909,UniProtKB/Swiss-Prot:P0CF08,Genbank:NP_414799.1,EcoGene:EG40001,GeneID:944946;Name=NP_414799.1;gbkey=CDS;gene=insA;product=IS1 repressor TnpA;protein_id=NP_414799.1;transl_table=11 NC_000913.3 RefSeq region 279931 280111 . + . ID=id44;gbkey=mobile_element NC_000913.3 RefSeq gene 279931 280104 . + . ID=gene270;Dbxref=EcoGene:EG40009,GeneID:14678508;Name=insI1;gbkey=Gene;gene=insI1;gene_biotype=pseudogene;gene_synonym=ECK0258;locus_tag=b4708;pseudo=true NC_000913.3 RefSeq CDS 279931 280104 . + 0 ID=cds258;Parent=gene270;Dbxref=EcoGene:EG40009,GeneID:14678508;Note=IS30 transposase%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insI1;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 280114 280425 . - . ID=id45;gbkey=mobile_element NC_000913.3 RefSeq gene 280114 280362 . - . ID=gene271;Dbxref=EcoGene:EG14418,GeneID:1450237;Name=insX;gbkey=Gene;gene=insX;gene_biotype=pseudogene;gene_synonym=ECK4473,ykgN;locus_tag=b4505;pseudo=true NC_000913.3 RefSeq CDS 280114 280362 . - 0 ID=cds259;Parent=gene271;Dbxref=ASAP:ABE-0285026,UniProtKB/Swiss-Prot:Q79E92,EcoGene:EG14418,GeneID:1450237;Note=pseudogene%2C IS3 family transposase family;gbkey=CDS;gene=insX;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 280427 280735 . - . ID=gene272;Dbxref=EcoGene:EG12339,GeneID:944944;Name=yagB;gbkey=Gene;gene=yagB;gene_biotype=pseudogene;gene_synonym=ECK0267,JW0259;locus_tag=b0266;pseudo=true NC_000913.3 RefSeq CDS 280427 280735 . - 0 ID=cds260;Parent=gene272;Dbxref=ASAP:ABE-0000912,UniProtKB/Swiss-Prot:P37008,EcoGene:EG12339,GeneID:944944;Note=pseudogene%2C CP4-6 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=yagB;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 280829 281983 . - . ID=gene273;Dbxref=EcoGene:EG12338,GeneID:944937;Name=yagA;gbkey=Gene;gene=yagA;gene_biotype=protein_coding;gene_synonym=ECK0268,JW0260;locus_tag=b0267 NC_000913.3 RefSeq CDS 280829 281983 . - 0 ID=cds261;Parent=gene273;Dbxref=ASAP:ABE-0000915,UniProtKB/Swiss-Prot:P37007,Genbank:NP_414801.1,EcoGene:EG12338,GeneID:944937;Name=NP_414801.1;gbkey=CDS;gene=yagA;product=CP4-6 prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_414801.1;transl_table=11 NC_000913.3 RefSeq gene 282278 283186 . + . ID=gene274;Dbxref=EcoGene:EG13344,GeneID:944925;Name=yagE;gbkey=Gene;gene=yagE;gene_biotype=protein_coding;gene_synonym=ECK0269,JW0261;locus_tag=b0268 NC_000913.3 RefSeq CDS 282278 283186 . + 0 ID=cds262;Parent=gene274;Dbxref=ASAP:ABE-0000921,UniProtKB/Swiss-Prot:P75682,Genbank:NP_414802.2,EcoGene:EG13344,GeneID:944925;Name=NP_414802.2;Note=putative lyase/synthase;gbkey=CDS;gene=yagE;product=2-keto-3-deoxy gluconate (KDG) aldolase%3B CP4-6 prophage;protein_id=NP_414802.2;transl_table=11 NC_000913.3 RefSeq gene 283201 285168 . + . ID=gene275;Dbxref=EcoGene:EG13345,GeneID:944928;Name=yagF;gbkey=Gene;gene=yagF;gene_biotype=protein_coding;gene_synonym=ECK0270,JW0262;locus_tag=b0269 NC_000913.3 RefSeq CDS 283201 285168 . + 0 ID=cds263;Parent=gene275;Dbxref=ASAP:ABE-0000923,UniProtKB/Swiss-Prot:P77596,Genbank:NP_414803.1,EcoGene:EG13345,GeneID:944928;Name=NP_414803.1;Note=putative dehydratase;gbkey=CDS;gene=yagF;product=CP4-6 prophage%3B dehydratase family protein;protein_id=NP_414803.1;transl_table=11 NC_000913.3 RefSeq gene 285395 286777 . + . ID=gene276;Dbxref=EcoGene:EG13346,GeneID:944947;Name=yagG;gbkey=Gene;gene=yagG;gene_biotype=protein_coding;gene_synonym=ECK0271,JW0263;locus_tag=b0270 NC_000913.3 RefSeq CDS 285395 286777 . + 0 ID=cds264;Parent=gene276;Dbxref=ASAP:ABE-0000929,UniProtKB/Swiss-Prot:P75683,Genbank:NP_414804.1,EcoGene:EG13346,GeneID:944947;Name=NP_414804.1;Note=putative permease;gbkey=CDS;gene=yagG;product=CP4-6 prophage%3B putative sugar transporter;protein_id=NP_414804.1;transl_table=11 NC_000913.3 RefSeq gene 286789 288399 . + . ID=gene277;Dbxref=EcoGene:EG13347,GeneID:944949;Name=yagH;gbkey=Gene;gene=yagH;gene_biotype=protein_coding;gene_synonym=ECK0272,JW0264;locus_tag=b0271 NC_000913.3 RefSeq CDS 286789 288399 . + 0 ID=cds265;Parent=gene277;Dbxref=ASAP:ABE-0000931,UniProtKB/Swiss-Prot:P77713,Genbank:NP_414805.1,EcoGene:EG13347,GeneID:944949;Name=NP_414805.1;Note=putative beta-xylosidase;gbkey=CDS;gene=yagH;product=CP4-6 prophage%3B putative xylosidase/arabinosidase;protein_id=NP_414805.1;transl_table=11 NC_000913.3 RefSeq gene 288404 289162 . - . ID=gene278;Dbxref=EcoGene:EG13349,GeneID:945016;Name=yagI;gbkey=Gene;gene=yagI;gene_biotype=protein_coding;gene_synonym=ECK0273,JW0265;locus_tag=b0272 NC_000913.3 RefSeq CDS 288404 289162 . - 0 ID=cds266;Parent=gene278;Dbxref=ASAP:ABE-0000933,UniProtKB/Swiss-Prot:P77300,Genbank:NP_414806.1,EcoGene:EG13349,GeneID:945016;Name=NP_414806.1;Note=putative regulator;gbkey=CDS;gene=yagI;product=CP4-6 prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_414806.1;transl_table=11 NC_000913.3 RefSeq gene 289301 290305 . - . ID=gene279;Dbxref=EcoGene:EG10067,GeneID:944844;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;gene_synonym=Arg5,argD,ECK0274,JW0266;locus_tag=b0273 NC_000913.3 RefSeq CDS 289301 290305 . - 0 ID=cds267;Parent=gene279;Dbxref=ASAP:ABE-0000939,UniProtKB/Swiss-Prot:P06960,Genbank:NP_414807.1,EcoGene:EG10067,GeneID:944844;Name=NP_414807.1;Note=ornithine carbamoyltransferase 2%2C chain F;gbkey=CDS;gene=argF;product=ornithine carbamoyltransferase 2%2C chain F%3B CP4-6 prophage;protein_id=NP_414807.1;transl_table=11 NC_000913.3 RefSeq gene 290429 290633 . + . ID=gene280;Dbxref=EcoGene:EG14492,GeneID:7751632;Name=ykgS;gbkey=Gene;gene=ykgS;gene_biotype=pseudogene;gene_synonym=ECK4504;locus_tag=b4688;pseudo=true NC_000913.3 RefSeq CDS 290429 290633 . + 0 ID=cds268;Parent=gene280;Dbxref=EcoGene:EG14492,GeneID:7751632;Note=pseudogene;gbkey=CDS;gene=ykgS;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 290634 291401 . - . ID=id46;gbkey=mobile_element NC_000913.3 RefSeq gene 290649 291152 . - . ID=gene281;Dbxref=EcoGene:EG40002,GeneID:944950;Name=insB1;gbkey=Gene;gene=insB1;gene_biotype=protein_coding;gene_synonym=ECK0022;locus_tag=b0274 NC_000913.3 RefSeq CDS 290649 291152 . - 0 ID=cds269;Parent=gene281;Dbxref=ASAP:ABE-0000948,UniProtKB/Swiss-Prot:P0CF27,Genbank:NP_414808.1,EcoGene:EG40002,GeneID:944950;Name=NP_414808.1;gbkey=CDS;gene=insB1;product=IS1 transposase B;protein_id=NP_414808.1;transl_table=11 NC_000913.3 RefSeq gene 291071 291346 . - . ID=gene282;Dbxref=EcoGene:EG40001,GeneID:944951;Name=insA;Note=insA3;gbkey=Gene;gene=insA;gene_biotype=protein_coding;gene_synonym=ECK4523;locus_tag=b0275 NC_000913.3 RefSeq CDS 291071 291346 . - 0 ID=cds270;Parent=gene282;Dbxref=ASAP:ABE-0000951,UniProtKB/Swiss-Prot:P0CF09,Genbank:NP_414809.1,EcoGene:EG40001,GeneID:944951;Name=NP_414809.1;gbkey=CDS;gene=insA;product=IS1 repressor TnpA;protein_id=NP_414809.1;transl_table=11 NC_000913.3 RefSeq gene 291404 292231 . + . ID=gene283;Dbxref=EcoGene:EG13549,GeneID:949094;Name=yagJ;gbkey=Gene;gene=yagJ;gene_biotype=pseudogene;gene_synonym=ECK0275,JW0270;locus_tag=b0276;pseudo=true NC_000913.3 RefSeq CDS 291404 292231 . + 0 ID=cds271;Parent=gene283;Dbxref=ASAP:ABE-0000963,UniProtKB/Swiss-Prot:P77169,EcoGene:EG13549,GeneID:949094;Note=CP4-6 prophage%3B uncharacterized protein%3BPhage or Prophage Related;gbkey=CDS;gene=yagJ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 292322 292948 . - . ID=gene284;Dbxref=EcoGene:EG13550,GeneID:945847;Name=yagK;gbkey=Gene;gene=yagK;gene_biotype=protein_coding;gene_synonym=ECK0276,JW0271;locus_tag=b0277 NC_000913.3 RefSeq CDS 292322 292948 . - 0 ID=cds272;Parent=gene284;Dbxref=ASAP:ABE-0000965,UniProtKB/Swiss-Prot:P77657,Genbank:NP_414811.1,EcoGene:EG13550,GeneID:945847;Name=NP_414811.1;gbkey=CDS;gene=yagK;product=CP4-6 prophage%3B conserved protein;protein_id=NP_414811.1;transl_table=11 NC_000913.3 RefSeq gene 293220 293918 . - . ID=gene285;Dbxref=EcoGene:EG13551,GeneID:945845;Name=yagL;gbkey=Gene;gene=yagL;gene_biotype=protein_coding;gene_synonym=ECK0277,JW0272;locus_tag=b0278 NC_000913.3 RefSeq CDS 293220 293918 . - 0 ID=cds273;Parent=gene285;Dbxref=ASAP:ABE-0000970,UniProtKB/Swiss-Prot:P77607,Genbank:NP_414812.1,EcoGene:EG13551,GeneID:945845;Name=NP_414812.1;Note=DNA-binding protein;gbkey=CDS;gene=yagL;product=CP4-6 prophage%3B DNA-binding protein;protein_id=NP_414812.1;transl_table=11 NC_000913.3 RefSeq gene 293945 294799 . - . ID=gene286;Dbxref=EcoGene:EG13552,GeneID:944959;Name=yagM;gbkey=Gene;gene=yagM;gene_biotype=protein_coding;gene_synonym=ECK0278,JW0273;locus_tag=b0279 NC_000913.3 RefSeq CDS 293945 294799 . - 0 ID=cds274;Parent=gene286;Dbxref=ASAP:ABE-0000972,UniProtKB/Swiss-Prot:P71296,Genbank:NP_414813.1,EcoGene:EG13552,GeneID:944959;Name=NP_414813.1;gbkey=CDS;gene=yagM;product=CP4-6 prophage%3B uncharacterized protein;protein_id=NP_414813.1;transl_table=11 NC_000913.3 RefSeq gene 295139 295579 . - . ID=gene287;Dbxref=EcoGene:EG13553,GeneID:945349;Name=yagN;gbkey=Gene;gene=yagN;gene_biotype=protein_coding;gene_synonym=ECK0279,JW0274;locus_tag=b0280 NC_000913.3 RefSeq CDS 295139 295579 . - 0 ID=cds275;Parent=gene287;Dbxref=ASAP:ABE-0000976,UniProtKB/Swiss-Prot:P71297,Genbank:NP_414814.1,EcoGene:EG13553,GeneID:945349;Name=NP_414814.1;gbkey=CDS;gene=yagN;product=CP4-6 prophage%3B uncharacterized protein;protein_id=NP_414814.1;transl_table=11 NC_000913.3 RefSeq gene 295696 297096 . - . ID=gene288;Dbxref=EcoGene:EG13554,GeneID:947351;Name=intF;gbkey=Gene;gene=intF;gene_biotype=protein_coding;gene_synonym=ECK0280,JW0275,yagO;locus_tag=b0281 NC_000913.3 RefSeq CDS 295696 297096 . - 0 ID=cds276;Parent=gene288;Dbxref=ASAP:ABE-0000979,UniProtKB/Swiss-Prot:P71298,Genbank:NP_414815.1,EcoGene:EG13554,GeneID:947351;Name=NP_414815.1;Note=putative phage integrase;gbkey=CDS;gene=intF;product=CP4-6 prophage%3B putative phage integrase;protein_id=NP_414815.1;transl_table=11 NC_000913.3 RefSeq gene 297206 297254 . + . ID=gene289;Dbxref=EcoGene:EG31171,GeneID:5625555;Name=ptwF;gbkey=Gene;gene=ptwF;gene_biotype=tRNA_pseudogene;gene_synonym=ECK4462;locus_tag=b4629;pseudo=true NC_000913.3 RefSeq tRNA 297206 297254 . + . ID=rna12;Parent=gene289;Dbxref=EcoGene:EG31171,GeneID:5625555;gbkey=tRNA;gene=ptwF;product=tRNA-OTHER;pseudo=true NC_000913.3 RefSeq exon 297206 297254 . + . ID=id47;Parent=rna12;Dbxref=EcoGene:EG31171,GeneID:5625555;gbkey=tRNA;gene=ptwF;product=tRNA-OTHER;pseudo=true NC_000913.3 RefSeq gene 297381 297719 . - . ID=gene290;Dbxref=EcoGene:EG13555,GeneID:7751633;Name=yagP;gbkey=Gene;gene=yagP;gene_biotype=pseudogene;gene_synonym=ECK0281,JW0276;locus_tag=b4694;pseudo=true NC_000913.3 RefSeq CDS 297381 297719 . - 0 ID=cds277;Parent=gene290;Dbxref=ASAP:ABE-0000982,UniProtKB/Swiss-Prot:P75684,EcoGene:EG13555,GeneID:7751633;Note=pseudogene%2C LysR family%2C fragment%3Bputative regulator%3B Not classified~putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yagP;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 297714 297791 . - . ID=gene291;Dbxref=EcoGene:EG14496,GeneID:7751634;Name=ykgT;gbkey=Gene;gene=ykgT;gene_biotype=pseudogene;gene_synonym=ECK4508,yagP;locus_tag=b4695;pseudo=true NC_000913.3 RefSeq CDS 297714 297791 . - 0 ID=cds278;Parent=gene291;Dbxref=EcoGene:EG14496,GeneID:7751634;Note=pseudogene%2C MobA-related;gbkey=CDS;gene=ykgT;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 297770 298726 . - . ID=gene292;Dbxref=EcoGene:EG13556,GeneID:945010;Name=paoD;gbkey=Gene;gene=paoD;gene_biotype=protein_coding;gene_synonym=ECK0282,JW0277,yagQ;locus_tag=b0283 NC_000913.3 RefSeq CDS 297770 298726 . - 0 ID=cds279;Parent=gene292;Dbxref=ASAP:ABE-0000984,UniProtKB/Swiss-Prot:P77183,Genbank:NP_414817.1,EcoGene:EG13556,GeneID:945010;Name=NP_414817.1;gbkey=CDS;gene=paoD;product=moco insertion factor for PaoABC aldehyde oxidoreductase;protein_id=NP_414817.1;transl_table=11 NC_000913.3 RefSeq gene 298736 300934 . - . ID=gene293;Dbxref=EcoGene:EG13557,GeneID:944961;Name=paoC;gbkey=Gene;gene=paoC;gene_biotype=protein_coding;gene_synonym=ECK0283,hsm,JW0278,yagR;locus_tag=b0284 NC_000913.3 RefSeq CDS 298736 300934 . - 0 ID=cds280;Parent=gene293;Dbxref=ASAP:ABE-0000988,UniProtKB/Swiss-Prot:P77489,Genbank:NP_414818.1,EcoGene:EG13557,GeneID:944961;Name=NP_414818.1;gbkey=CDS;gene=paoC;product=PaoABC aldehyde oxidoreductase%2C Moco-containing subunit;protein_id=NP_414818.1;transl_table=11 NC_000913.3 RefSeq gene 300931 301887 . - . ID=gene294;Dbxref=EcoGene:EG13558,GeneID:945710;Name=paoB;gbkey=Gene;gene=paoB;gene_biotype=protein_coding;gene_synonym=ECK0284,JW0279,yagS;locus_tag=b0285 NC_000913.3 RefSeq CDS 300931 301887 . - 0 ID=cds281;Parent=gene294;Dbxref=ASAP:ABE-0000990,UniProtKB/Swiss-Prot:P77324,Genbank:NP_414819.1,EcoGene:EG13558,GeneID:945710;Name=NP_414819.1;gbkey=CDS;gene=paoB;product=PaoABC aldehyde oxidoreductase%2C FAD-containing subunit;protein_id=NP_414819.1;transl_table=11 NC_000913.3 RefSeq gene 301884 302573 . - . ID=gene295;Dbxref=EcoGene:EG13559,GeneID:945330;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;gene_synonym=ECK0285,JW0280,yagT;locus_tag=b0286 NC_000913.3 RefSeq CDS 301884 302573 . - 0 ID=cds282;Parent=gene295;Dbxref=ASAP:ABE-0000992,UniProtKB/Swiss-Prot:P77165,Genbank:NP_414820.1,EcoGene:EG13559,GeneID:945330;Name=NP_414820.1;Note=putative xanthine dehydrogenase;gbkey=CDS;gene=paoA;product=PaoABC aldehyde oxidoreductase%2C 2Fe-2S subunit;protein_id=NP_414820.1;transl_table=11 NC_000913.3 RefSeq gene 302991 303605 . + . ID=gene296;Dbxref=EcoGene:EG13560,GeneID:945677;Name=yagU;gbkey=Gene;gene=yagU;gene_biotype=protein_coding;gene_synonym=ECK0286,JW0281;locus_tag=b0287 NC_000913.3 RefSeq CDS 302991 303605 . + 0 ID=cds283;Parent=gene296;Dbxref=ASAP:ABE-0000995,UniProtKB/Swiss-Prot:P0AAA1,Genbank:NP_414821.1,EcoGene:EG13560,GeneID:945677;Name=NP_414821.1;gbkey=CDS;gene=yagU;product=DUF1440 family inner membrane acid resistance protein;protein_id=NP_414821.1;transl_table=11 NC_000913.3 RefSeq gene 303853 304182 . - . ID=gene297;Dbxref=EcoGene:EG14323,GeneID:945905;Name=ykgJ;gbkey=Gene;gene=ykgJ;gene_biotype=protein_coding;gene_synonym=ECK0287,JW0282;locus_tag=b0288 NC_000913.3 RefSeq CDS 303853 304182 . - 0 ID=cds284;Parent=gene297;Dbxref=ASAP:ABE-0000997,UniProtKB/Swiss-Prot:P0AAL9,Genbank:NP_414822.1,EcoGene:EG14323,GeneID:945905;Name=NP_414822.1;Note=putative ferredoxin;gbkey=CDS;gene=ykgJ;product=UPF0153 cysteine cluster protein;protein_id=NP_414822.1;transl_table=11 NC_000913.3 RefSeq gene 304495 305205 . - . ID=gene298;Dbxref=EcoGene:EG13561,GeneID:946631;Name=ecpE;gbkey=Gene;gene=ecpE;gene_biotype=protein_coding;gene_synonym=ECK0288,JW5030,matF,yagV;locus_tag=b0289 NC_000913.3 RefSeq CDS 304495 305205 . - 0 ID=cds285;Parent=gene298;Dbxref=ASAP:ABE-0001000,UniProtKB/Swiss-Prot:P77263,Genbank:NP_414823.2,EcoGene:EG13561,GeneID:946631;Name=NP_414823.2;gbkey=CDS;gene=ecpE;product=ECP production pilus chaperone;protein_id=NP_414823.2;transl_table=11 NC_000913.3 RefSeq gene 305174 306817 . - . ID=gene299;Dbxref=EcoGene:EG13562,GeneID:947349;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;gene_synonym=ECK0289,JW0284,matE,yagW;locus_tag=b0290 NC_000913.3 RefSeq CDS 305174 306817 . - 0 ID=cds286;Parent=gene299;Dbxref=ASAP:ABE-0001002,UniProtKB/Swiss-Prot:P77694,Genbank:NP_414824.1,EcoGene:EG13562,GeneID:947349;Name=NP_414824.1;Note=putative receptor;gbkey=CDS;gene=ecpD;product=polymerized tip adhesin of ECP fibers;protein_id=NP_414824.1;transl_table=11 NC_000913.3 RefSeq gene 306807 309332 . - . ID=gene300;Dbxref=EcoGene:EG13563,GeneID:947606;Name=ecpC;gbkey=Gene;gene=ecpC;gene_biotype=protein_coding;gene_synonym=ECK0290,JW0285,matD,yagX;locus_tag=b0291 NC_000913.3 RefSeq CDS 306807 309332 . - 0 ID=cds287;Parent=gene300;Dbxref=ASAP:ABE-0001005,UniProtKB/Swiss-Prot:P77802,Genbank:NP_414825.1,EcoGene:EG13563,GeneID:947606;Name=NP_414825.1;Note=putative enzyme;gbkey=CDS;gene=ecpC;product=ECP production outer membrane protein;protein_id=NP_414825.1;transl_table=11 NC_000913.3 RefSeq gene 309358 310026 . - . ID=gene301;Dbxref=EcoGene:EG13564,GeneID:948806;Name=ecpB;gbkey=Gene;gene=ecpB;gene_biotype=protein_coding;gene_synonym=ECK0291,JW0286,matC,yagY;locus_tag=b0292 NC_000913.3 RefSeq CDS 309358 310026 . - 0 ID=cds288;Parent=gene301;Dbxref=ASAP:ABE-0001007,UniProtKB/Swiss-Prot:P77188,Genbank:NP_414826.1,EcoGene:EG13564,GeneID:948806;Name=NP_414826.1;gbkey=CDS;gene=ecpB;product=ECP production pilus chaperone;protein_id=NP_414826.1;transl_table=11 NC_000913.3 RefSeq gene 310084 310671 . - . ID=gene302;Dbxref=EcoGene:EG13565,GeneID:948759;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=ECK0292,JW0287,matB,yagZ;locus_tag=b0293 NC_000913.3 RefSeq CDS 310084 310671 . - 0 ID=cds289;Parent=gene302;Dbxref=ASAP:ABE-0001009,UniProtKB/Swiss-Prot:P0AAA3,Genbank:NP_414827.1,EcoGene:EG13565,GeneID:948759;Name=NP_414827.1;gbkey=CDS;gene=ecpA;product=ECP pilin;protein_id=NP_414827.1;transl_table=11 NC_000913.3 RefSeq gene 310746 311336 . - . ID=gene303;Dbxref=EcoGene:EG14324,GeneID:944966;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=ECK0293,JW5031,matA,ykgK;locus_tag=b0294 NC_000913.3 RefSeq CDS 310746 311336 . - 0 ID=cds290;Parent=gene303;Dbxref=ASAP:ABE-0001011,UniProtKB/Swiss-Prot:P71301,Genbank:NP_414828.1,EcoGene:EG14324,GeneID:944966;Name=NP_414828.1;Note=putative regulator;gbkey=CDS;gene=ecpR;product=putative transcriptional regulator for the ecp operon;protein_id=NP_414828.1;transl_table=11 NC_000913.3 RefSeq gene 312112 312339 . + . ID=gene304;Dbxref=EcoGene:EG14325,GeneID:944962;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=protein_coding;gene_synonym=ECK0294,JW5033;locus_tag=b0295 NC_000913.3 RefSeq CDS 312112 312339 . + 0 ID=cds291;Parent=gene304;Dbxref=ASAP:ABE-0001019,UniProtKB/Swiss-Prot:P56257,Genbank:NP_414829.1,EcoGene:EG14325,GeneID:944962;Name=NP_414829.1;gbkey=CDS;gene=ykgL;product=uncharacterized protein;protein_id=NP_414829.1;transl_table=11 NC_000913.3 RefSeq gene 312374 312514 . - . ID=gene305;Dbxref=EcoGene:EG14432,GeneID:1450238;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;gene_synonym=ECK0295,JW5034,rpmJ2;locus_tag=b4506 NC_000913.3 RefSeq CDS 312374 312514 . - 0 ID=cds292;Parent=gene305;Dbxref=ASAP:ABE-0285027,UniProtKB/Swiss-Prot:Q2EEQ2,Genbank:YP_588437.1,EcoGene:EG14432,GeneID:1450238;Name=YP_588437.1;gbkey=CDS;gene=ykgO;product=RpmJ-like protein;protein_id=YP_588437.1;transl_table=11 NC_000913.3 RefSeq gene 312514 312777 . - . ID=gene306;Dbxref=EcoGene:EG14326,GeneID:944960;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;gene_synonym=ECK0296,JW5035,rpmE2;locus_tag=b0296 NC_000913.3 RefSeq CDS 312514 312777 . - 0 ID=cds293;Parent=gene306;Dbxref=ASAP:ABE-0001021,UniProtKB/Swiss-Prot:P0A7N1,Genbank:NP_414830.1,EcoGene:EG14326,GeneID:944960;Name=NP_414830.1;gbkey=CDS;gene=ykgM;product=50S ribosomal protein L31 type B%3B alternative zinc-limitation L31 protein;protein_id=NP_414830.1;transl_table=11 NC_000913.3 RefSeq gene 313141 313242 . - . ID=gene307;Dbxref=EcoGene:EG14476,GeneID:7751635;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;gene_synonym=ECK4486;locus_tag=b4671 NC_000913.3 RefSeq CDS 313141 313242 . - 0 ID=cds294;Parent=gene307;Dbxref=UniProtKB/Swiss-Prot:C1P5Z8,Genbank:YP_002791238.1,EcoGene:EG14476,GeneID:7751635;Name=YP_002791238.1;gbkey=CDS;gene=ykgR;product=uncharacterized protein;protein_id=YP_002791238.1;transl_table=11 NC_000913.3 RefSeq gene 313716 313805 . - . ID=gene308;Dbxref=EcoGene:EG14433,GeneID:5625556;Name=ykgP;gbkey=Gene;gene=ykgP;gene_biotype=pseudogene;gene_synonym=ECK4446;locus_tag=b4630;pseudo=true NC_000913.3 RefSeq CDS 313716 313805 . - 0 ID=cds295;Parent=gene308;Dbxref=EcoGene:EG14433,GeneID:5625556;Note=pseudogene%2C oxidoreductase family;gbkey=CDS;gene=ykgP;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 314357 315228 . + . ID=gene309;Dbxref=EcoGene:EG12161,GeneID:944957;Name=eaeH;gbkey=Gene;gene=eaeH;gene_biotype=pseudogene;gene_synonym=ECK0297,JW0291;locus_tag=b0297;pseudo=true NC_000913.3 RefSeq CDS 314357 315228 . + 0 ID=cds296;Parent=gene309;Dbxref=ASAP:ABE-0001025,UniProtKB/Swiss-Prot:P36943,EcoGene:EG12161,GeneID:944957;Note=pseudogene%2C attaching and effacing protein homology%3Bfactor%3B Not classified;gbkey=CDS;gene=eaeH;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 315229 316483 . + . ID=id48;gbkey=mobile_element NC_000913.3 RefSeq gene 315291 315590 . + . ID=gene310;Dbxref=EcoGene:EG40005,GeneID:944952;Name=insE1;gbkey=Gene;gene=insE1;gene_biotype=protein_coding;gene_synonym=ECK0298;locus_tag=b0298 NC_000913.3 RefSeq CDS 315291 315590 . + 0 ID=cds297;Parent=gene310;Dbxref=ASAP:ABE-0001028,UniProtKB/Swiss-Prot:P0CF66,Genbank:NP_414832.2,EcoGene:EG40005,GeneID:944952;Name=NP_414832.2;gbkey=CDS;gene=insE1;product=IS3 transposase A;protein_id=NP_414832.2;transl_table=11 NC_000913.3 RefSeq gene 315587 316453 . + . ID=gene311;Dbxref=EcoGene:EG40006,GeneID:944948;Name=insF1;gbkey=Gene;gene=insF1;gene_biotype=protein_coding;gene_synonym=ECK0299;locus_tag=b0299 NC_000913.3 RefSeq CDS 315587 316453 . + 0 ID=cds298;Parent=gene311;Dbxref=ASAP:ABE-0001030,UniProtKB/Swiss-Prot:P0CF79,Genbank:NP_414833.1,EcoGene:EG40006,GeneID:944948;Name=NP_414833.1;gbkey=CDS;gene=insF1;product=IS3 transposase B;protein_id=NP_414833.1;transl_table=11 NC_000913.3 RefSeq gene 316486 317169 . - . ID=gene312;Dbxref=EcoGene:EG13381,GeneID:944956;Name=ykgA;gbkey=Gene;gene=ykgA;gene_biotype=pseudogene;gene_synonym=ECK0300,JW5037;locus_tag=b0300;pseudo=true NC_000913.3 RefSeq CDS 316486 317169 . - 0 ID=cds299;Parent=gene312;Dbxref=ASAP:ABE-0001032,UniProtKB/Swiss-Prot:P77601,EcoGene:EG13381,GeneID:944956;Note=pseudogene%2C AraC family%3Bputative regulator%3B Not classified~putative ARAC-type regulatory protein;gbkey=CDS;gene=ykgA;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 317439 317567 . + . ID=gene313;Dbxref=EcoGene:EG14443,GeneID:5625557;Name=ykgQ;gbkey=Gene;gene=ykgQ;gene_biotype=pseudogene;gene_synonym=ECK4454;locus_tag=b4631;pseudo=true NC_000913.3 RefSeq CDS 317439 317567 . + 0 ID=cds300;Parent=gene313;Dbxref=EcoGene:EG14443,GeneID:5625557;Note=pseudogene%2C putative dehydrogenase;gbkey=CDS;gene=ykgQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 317726 318319 . - . ID=gene314;Dbxref=EcoGene:EG13579,GeneID:944974;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;gene_synonym=ECK0301,JW5038;locus_tag=b0301 NC_000913.3 RefSeq CDS 317726 318319 . - 0 ID=cds301;Parent=gene314;Dbxref=ASAP:ABE-0001038,UniProtKB/Swiss-Prot:P75685,Genbank:NP_414835.2,EcoGene:EG13579,GeneID:944974;Name=NP_414835.2;gbkey=CDS;gene=rclC;product=reactive chlorine species (RCS) stress resistance inner membrane protein;protein_id=NP_414835.2;transl_table=11 NC_000913.3 RefSeq gene 318331 318567 . - . ID=gene315;Dbxref=EcoGene:EG14278,GeneID:945658;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;gene_synonym=ECK0302,JW5039,ykgB,ykgI;locus_tag=b0303 NC_000913.3 RefSeq CDS 318331 318567 . - 0 ID=cds302;Parent=gene315;Dbxref=ASAP:ABE-0001043,UniProtKB/Swiss-Prot:P75687,Genbank:NP_414837.2,EcoGene:EG14278,GeneID:945658;Name=NP_414837.2;Note=the overlapping ORF b0302 on the opposite strand is no longer thought to be an actual gene%2C and has been deaccessioned;gbkey=CDS;gene=rclB;product=reactive chlorine species (RCS) stress resistance periplasmic protein;protein_id=NP_414837.2;transl_table=11 NC_000913.3 RefSeq gene 318676 320001 . - . ID=gene316;Dbxref=EcoGene:EG13580,GeneID:946092;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;gene_synonym=ECK0303,JW5040,ykgC;locus_tag=b0304 NC_000913.3 RefSeq CDS 318676 320001 . - 0 ID=cds303;Parent=gene316;Dbxref=ASAP:ABE-0001048,UniProtKB/Swiss-Prot:P77212,Genbank:NP_414838.2,EcoGene:EG13580,GeneID:946092;Name=NP_414838.2;Note=putative oxidoreductase;gbkey=CDS;gene=rclA;product=reactive chlorine stress species (RCS) resistance protein%3B pyridine nucleotide-dependent disulfide oxidoreductase family;protein_id=NP_414838.2;transl_table=11 NC_000913.3 RefSeq gene 320227 321081 . + . ID=gene317;Dbxref=EcoGene:EG13581,GeneID:945616;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;gene_synonym=ECK0304,JW0298,ykgD;locus_tag=b0305 NC_000913.3 RefSeq CDS 320227 321081 . + 0 ID=cds304;Parent=gene317;Dbxref=ASAP:ABE-0001054,UniProtKB/Swiss-Prot:P77379,Genbank:NP_414839.1,EcoGene:EG13581,GeneID:945616;Name=NP_414839.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=rclR;product=reactive chlorine species (RCS)-specific activator of the rcl genes;protein_id=NP_414839.1;transl_table=11 NC_000913.3 RefSeq gene 321608 322327 . + . ID=gene318;Dbxref=EcoGene:EG13582,GeneID:948438;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;gene_synonym=ECK0305,JW5041;locus_tag=b0306 NC_000913.3 RefSeq CDS 321608 322327 . + 0 ID=cds305;Parent=gene318;Dbxref=ASAP:ABE-0001058,UniProtKB/Swiss-Prot:P77252,Genbank:NP_414840.1,EcoGene:EG13582,GeneID:948438;Name=NP_414840.1;Note=putative dehydrogenase subunit;gbkey=CDS;gene=ykgE;product=cysteine-rich LutA family protein%3B putative electron transport chain YkgEFG component;protein_id=NP_414840.1;transl_table=11 NC_000913.3 RefSeq gene 322338 323765 . + . ID=gene319;Dbxref=EcoGene:EG13583,GeneID:944980;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;gene_synonym=ECK0306,JW0300;locus_tag=b0307 NC_000913.3 RefSeq CDS 322338 323765 . + 0 ID=cds306;Parent=gene319;Dbxref=ASAP:ABE-0001060,UniProtKB/Swiss-Prot:P77536,Genbank:NP_414841.1,EcoGene:EG13583,GeneID:944980;Name=NP_414841.1;gbkey=CDS;gene=ykgF;product=ferridoxin-like LutB family protein%3B putative electron transport chain YkgEFG component;protein_id=NP_414841.1;transl_table=11 NC_000913.3 RefSeq gene 323758 324453 . + . ID=gene320;Dbxref=EcoGene:EG13584,GeneID:945906;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;gene_synonym=ECK0307,JW5042;locus_tag=b0308 NC_000913.3 RefSeq CDS 323758 324453 . + 0 ID=cds307;Parent=gene320;Dbxref=ASAP:ABE-0001062,UniProtKB/Swiss-Prot:P77433,Genbank:NP_414842.4,EcoGene:EG13584,GeneID:945906;Name=NP_414842.4;Note=putative transporter;gbkey=CDS;gene=ykgG;product=LutC family protein%3B putative electron transport chain YkgEFG component;protein_id=NP_414842.4;transl_table=11 NC_000913.3 RefSeq gene 324696 325364 . - . ID=gene321;Dbxref=EcoGene:EG13585,GeneID:947513;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;gene_synonym=ECK0308,JW0302;locus_tag=b0310 NC_000913.3 RefSeq CDS 324696 325364 . - 0 ID=cds308;Parent=gene321;Dbxref=ASAP:ABE-0001066,UniProtKB/Swiss-Prot:P77180,Genbank:NP_414844.1,EcoGene:EG13585,GeneID:947513;Name=NP_414844.1;gbkey=CDS;gene=ykgH;product=putative inner membrane protein;protein_id=NP_414844.1;transl_table=11 NC_000913.3 RefSeq gene 325577 327247 . - . ID=gene322;Dbxref=EcoGene:EG10109,GeneID:945716;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;gene_synonym=ECK0309,JW0303;locus_tag=b0311 NC_000913.3 RefSeq CDS 325577 327247 . - 0 ID=cds309;Parent=gene322;Dbxref=ASAP:ABE-0001070,UniProtKB/Swiss-Prot:P17444,Genbank:NP_414845.1,EcoGene:EG10109,GeneID:945716;Name=NP_414845.1;gbkey=CDS;gene=betA;product=choline dehydrogenase%2C a flavoprotein;protein_id=NP_414845.1;transl_table=11 NC_000913.3 RefSeq gene 327261 328733 . - . ID=gene323;Dbxref=EcoGene:EG10110,GeneID:947376;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;gene_synonym=ECK0310,JW0304;locus_tag=b0312 NC_000913.3 RefSeq CDS 327261 328733 . - 0 ID=cds310;Parent=gene323;Dbxref=ASAP:ABE-0001072,UniProtKB/Swiss-Prot:P17445,Genbank:NP_414846.1,EcoGene:EG10110,GeneID:947376;Name=NP_414846.1;Note=NAD+-dependent betaine aldehyde dehydrogenase;gbkey=CDS;gene=betB;product=betaine aldehyde dehydrogenase%2C NAD-dependent;protein_id=NP_414846.1;transl_table=11 NC_000913.3 RefSeq gene 328747 329334 . - . ID=gene324;Dbxref=EcoGene:EG10111,GeneID:944981;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;gene_synonym=ECK0311,JW0305;locus_tag=b0313 NC_000913.3 RefSeq CDS 328747 329334 . - 0 ID=cds311;Parent=gene324;Dbxref=ASAP:ABE-0001076,UniProtKB/Swiss-Prot:P17446,Genbank:NP_414847.3,EcoGene:EG10111,GeneID:944981;Name=NP_414847.3;Note=probably transcriptional repressor of bet genes;gbkey=CDS;gene=betI;product=choline-inducible betIBA-betT divergent operon transcriptional repressor;protein_id=NP_414847.3;transl_table=11 NC_000913.3 RefSeq gene 329463 331496 . + . ID=gene325;Dbxref=EcoGene:EG10112,GeneID:945079;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;gene_synonym=ECK0312,JW0306;locus_tag=b0314 NC_000913.3 RefSeq CDS 329463 331496 . + 0 ID=cds312;Parent=gene325;Dbxref=ASAP:ABE-0001080,UniProtKB/Swiss-Prot:P0ABC9,Genbank:NP_414848.1,EcoGene:EG10112,GeneID:945079;Name=NP_414848.1;Note=high-affinity choline transport;gbkey=CDS;gene=betT;product=choline transporter of high affinity;protein_id=NP_414848.1;transl_table=11 NC_000913.3 RefSeq gene 332371 333459 . + . ID=gene326;Dbxref=EcoGene:EG11236,GeneID:947459;Name=yahA;gbkey=Gene;gene=yahA;gene_biotype=protein_coding;gene_synonym=ECK0313,JW0307;locus_tag=b0315 NC_000913.3 RefSeq CDS 332371 333459 . + 0 ID=cds313;Parent=gene326;Dbxref=ASAP:ABE-0001086,UniProtKB/Swiss-Prot:P21514,Genbank:NP_414849.1,EcoGene:EG11236,GeneID:947459;Name=NP_414849.1;gbkey=CDS;gene=yahA;product=c-di-GMP-specific phosphodiesterase;protein_id=NP_414849.1;transl_table=11 NC_000913.3 RefSeq gene 333501 334433 . - . ID=gene327;Dbxref=EcoGene:EG13586,GeneID:945278;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;gene_synonym=ECK0314,JW0308;locus_tag=b0316 NC_000913.3 RefSeq CDS 333501 334433 . - 0 ID=cds314;Parent=gene327;Dbxref=ASAP:ABE-0001088,UniProtKB/Swiss-Prot:P77700,Genbank:NP_414850.1,EcoGene:EG13586,GeneID:945278;Name=NP_414850.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yahB;product=putative DNA-bindng transcriptional regulator;protein_id=NP_414850.1;transl_table=11 NC_000913.3 RefSeq gene 334525 335022 . - . ID=gene328;Dbxref=EcoGene:EG13587,GeneID:947337;Name=yahC;gbkey=Gene;gene=yahC;gene_biotype=protein_coding;gene_synonym=ECK0315,JW0309;locus_tag=b0317 NC_000913.3 RefSeq CDS 334525 335022 . - 0 ID=cds315;Parent=gene328;Dbxref=ASAP:ABE-0001091,UniProtKB/Swiss-Prot:P77219,Genbank:NP_414851.1,EcoGene:EG13587,GeneID:947337;Name=NP_414851.1;gbkey=CDS;gene=yahC;product=putative inner membrane protein;protein_id=NP_414851.1;transl_table=11 NC_000913.3 RefSeq gene 335280 335885 . + . ID=gene329;Dbxref=EcoGene:EG13588,GeneID:947681;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;gene_synonym=ECK0316,JW0310;locus_tag=b0318 NC_000913.3 RefSeq CDS 335280 335885 . + 0 ID=cds316;Parent=gene329;Dbxref=ASAP:ABE-0001095,UniProtKB/Swiss-Prot:P77736,Genbank:NP_414852.1,EcoGene:EG13588,GeneID:947681;Name=NP_414852.1;Note=putative transcription factor;gbkey=CDS;gene=yahD;product=ankyrin repeat protein;protein_id=NP_414852.1;transl_table=11 NC_000913.3 RefSeq gene 335925 336788 . + . ID=gene330;Dbxref=EcoGene:EG13589,GeneID:947134;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;gene_synonym=ECK0317,JW0311;locus_tag=b0319 NC_000913.3 RefSeq CDS 335925 336788 . + 0 ID=cds317;Parent=gene330;Dbxref=ASAP:ABE-0001097,UniProtKB/Swiss-Prot:P77297,Genbank:NP_414853.1,EcoGene:EG13589,GeneID:947134;Name=NP_414853.1;gbkey=CDS;gene=yahE;product=DUF2877 family protein;protein_id=NP_414853.1;transl_table=11 NC_000913.3 RefSeq gene 336778 338325 . + . ID=gene331;Dbxref=EcoGene:EG13590,GeneID:947298;Name=yahF;gbkey=Gene;gene=yahF;gene_biotype=protein_coding;gene_synonym=ECK0318,JW0312;locus_tag=b0320 NC_000913.3 RefSeq CDS 336778 338325 . + 0 ID=cds318;Parent=gene331;Dbxref=ASAP:ABE-0001099,UniProtKB/Swiss-Prot:P77187,Genbank:NP_414854.1,EcoGene:EG13590,GeneID:947298;Name=NP_414854.1;Note=putative oxidoreductase subunit;gbkey=CDS;gene=yahF;product=putative NAD(P)-binding succinyl-CoA synthase;protein_id=NP_414854.1;transl_table=11 NC_000913.3 RefSeq gene 338325 339743 . + . ID=gene332;Dbxref=EcoGene:EG13591,GeneID:945379;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;gene_synonym=ECK0319,JW0313;locus_tag=b0321 NC_000913.3 RefSeq CDS 338325 339743 . + 0 ID=cds319;Parent=gene332;Dbxref=ASAP:ABE-0001101,UniProtKB/Swiss-Prot:P77221,Genbank:NP_414855.1,EcoGene:EG13591,GeneID:945379;Name=NP_414855.1;gbkey=CDS;gene=yahG;product=DUF1116 family protein;protein_id=NP_414855.1;transl_table=11 NC_000913.3 RefSeq repeat_region 339757 340114 . + . ID=id49;Note=REP23 (repetitive extragenic palindromic) element%3B contains 8 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 340165 341115 . + . ID=gene333;Dbxref=EcoGene:EG13593,GeneID:944984;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;gene_synonym=ECK0321,JW0315;locus_tag=b0323 NC_000913.3 RefSeq CDS 340165 341115 . + 0 ID=cds320;Parent=gene333;Dbxref=ASAP:ABE-0001107,UniProtKB/Swiss-Prot:P77624,Genbank:NP_414857.1,EcoGene:EG13593,GeneID:944984;Name=NP_414857.1;Note=putative kinase;gbkey=CDS;gene=yahI;product=carbamate kinase-like protein;protein_id=NP_414857.1;transl_table=11 NC_000913.3 RefSeq gene 341125 342507 . + . ID=gene334;Dbxref=EcoGene:EG13594,GeneID:944976;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;gene_synonym=ECK0322,JW0316;locus_tag=b0324 NC_000913.3 RefSeq CDS 341125 342507 . + 0 ID=cds321;Parent=gene334;Dbxref=ASAP:ABE-0001109,UniProtKB/Swiss-Prot:P77554,Genbank:NP_414858.1,EcoGene:EG13594,GeneID:944976;Name=NP_414858.1;Note=putative deaminase;gbkey=CDS;gene=yahJ;product=putative metallo-dependent hydrolase domain deaminase;protein_id=NP_414858.1;transl_table=11 NC_000913.3 RefSeq gene 342884 343933 . + . ID=gene335;Dbxref=EcoGene:EG13595,GeneID:944975;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;gene_synonym=ECK0323,JW0317;locus_tag=b0325 NC_000913.3 RefSeq CDS 342884 343933 . + 0 ID=cds322;Parent=gene335;Dbxref=ASAP:ABE-0001113,UniProtKB/Swiss-Prot:P75691,Genbank:NP_414859.1,EcoGene:EG13595,GeneID:944975;Name=NP_414859.1;Note=putative oxidoreductase;gbkey=CDS;gene=yahK;product=broad specificity NADPH-dependent aldehyde reductase%2C Zn-containing;protein_id=NP_414859.1;transl_table=11 NC_000913.3 RefSeq gene 344176 344991 . + . ID=gene336;Dbxref=EcoGene:EG13596,GeneID:944970;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;gene_synonym=ECK0324,JW0318;locus_tag=b0326 NC_000913.3 RefSeq CDS 344176 344991 . + 0 ID=cds323;Parent=gene336;Dbxref=ASAP:ABE-0001117,UniProtKB/Swiss-Prot:P77393,Genbank:NP_414860.1,EcoGene:EG13596,GeneID:944970;Name=NP_414860.1;gbkey=CDS;gene=yahL;product=uncharacterized protein;protein_id=NP_414860.1;transl_table=11 NC_000913.3 RefSeq gene 345404 345649 . + . ID=gene337;Dbxref=EcoGene:EG13597,GeneID:944969;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;gene_synonym=ECK0325,JW5044;locus_tag=b0327 NC_000913.3 RefSeq CDS 345404 345649 . + 0 ID=cds324;Parent=gene337;Dbxref=ASAP:ABE-0001120,UniProtKB/Swiss-Prot:P75692,Genbank:NP_414861.2,EcoGene:EG13597,GeneID:944969;Name=NP_414861.2;gbkey=CDS;gene=yahM;product=uncharacterized protein;protein_id=NP_414861.2;transl_table=11 NC_000913.3 RefSeq gene 345666 346337 . - . ID=gene338;Dbxref=EcoGene:EG13598,GeneID:944968;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;gene_synonym=ECK0326,JW0320;locus_tag=b0328 NC_000913.3 RefSeq CDS 345666 346337 . - 0 ID=cds325;Parent=gene338;Dbxref=ASAP:ABE-0001122,UniProtKB/Swiss-Prot:P75693,Genbank:NP_414862.1,EcoGene:EG13598,GeneID:944968;Name=NP_414862.1;Note=putative cytochrome subunit of dehydrogenase;gbkey=CDS;gene=yahN;product=amino acid exporter for proline%2C lysine%2C glutamate%2C homoserine;protein_id=NP_414862.1;transl_table=11 NC_000913.3 RefSeq gene 346484 346759 . + . ID=gene339;Dbxref=EcoGene:EG13599,GeneID:944985;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;gene_synonym=ECK0327,JW0321;locus_tag=b0329 NC_000913.3 RefSeq CDS 346484 346759 . + 0 ID=cds326;Parent=gene339;Dbxref=ASAP:ABE-0001130,UniProtKB/Swiss-Prot:P75694,Genbank:NP_414863.1,EcoGene:EG13599,GeneID:944985;Name=NP_414863.1;gbkey=CDS;gene=yahO;product=periplasmic protein%2C function unknown%2C YhcN family;protein_id=NP_414863.1;transl_table=11 NC_000913.3 RefSeq repeat_region 346824 346853 . + . ID=id50;Note=REP24 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 346857 348443 . - . ID=gene340;Dbxref=EcoGene:EG13600,GeneID:944987;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;gene_synonym=ECK0328,JW0322,yahP;locus_tag=b0330 NC_000913.3 RefSeq CDS 346857 348443 . - 0 ID=cds327;Parent=gene340;Dbxref=ASAP:ABE-0001133,UniProtKB/Swiss-Prot:P77743,Genbank:NP_414864.1,EcoGene:EG13600,GeneID:944987;Name=NP_414864.1;Note=regulator for prp operon;gbkey=CDS;gene=prpR;product=propionate catabolism operon regulatory protein;protein_id=NP_414864.1;transl_table=11 NC_000913.3 RefSeq gene 348682 349572 . + . ID=gene341;Dbxref=EcoGene:EG13601,GeneID:944990;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;gene_synonym=ECK0329,JW0323,yahQ;locus_tag=b0331 NC_000913.3 RefSeq CDS 348682 349572 . + 0 ID=cds328;Parent=gene341;Dbxref=ASAP:ABE-0001138,UniProtKB/Swiss-Prot:P77541,Genbank:NP_414865.1,EcoGene:EG13601,GeneID:944990;Name=NP_414865.1;Note=putative phosphonomutase 2;gbkey=CDS;gene=prpB;product=2-methylisocitrate lyase;protein_id=NP_414865.1;transl_table=11 NC_000913.3 RefSeq repeat_region 349605 349969 . + . ID=id51;Note=REP25 (repetitive extragenic palindromic) element%3B contains 8 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 350012 351181 . + . ID=gene342;Dbxref=EcoGene:EG11756,GeneID:947528;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;gene_synonym=ECK0330,JW0324,yahS,yzzD;locus_tag=b0333 NC_000913.3 RefSeq CDS 350012 351181 . + 0 ID=cds329;Parent=gene342;Dbxref=ASAP:ABE-0001148,UniProtKB/Swiss-Prot:P31660,Genbank:NP_414867.1,EcoGene:EG11756,GeneID:947528;Name=NP_414867.1;Note=putative citrate synthase%3B propionate metabolism?;gbkey=CDS;gene=prpC;product=2-methylcitrate synthase;protein_id=NP_414867.1;transl_table=11 NC_000913.3 RefSeq gene 351215 352666 . + . ID=gene343;Dbxref=EcoGene:EG13603,GeneID:945931;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;gene_synonym=acnC,ECK0331,JW0325,yahT;locus_tag=b0334 NC_000913.3 RefSeq CDS 351215 352666 . + 0 ID=cds330;Parent=gene343;Dbxref=ASAP:ABE-0001152,UniProtKB/Swiss-Prot:P77243,Genbank:NP_414868.1,EcoGene:EG13603,GeneID:945931;Name=NP_414868.1;gbkey=CDS;gene=prpD;product=2-methylcitrate dehydratase;protein_id=NP_414868.1;transl_table=11 NC_000913.3 RefSeq gene 352706 354592 . + . ID=gene344;Dbxref=EcoGene:EG13604,GeneID:946891;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;gene_synonym=ECK0332,JW0326,yahU;locus_tag=b0335 NC_000913.3 RefSeq CDS 352706 354592 . + 0 ID=cds331;Parent=gene344;Dbxref=ASAP:ABE-0001154,UniProtKB/Swiss-Prot:P77495,Genbank:NP_414869.1,EcoGene:EG13604,GeneID:946891;Name=NP_414869.1;Note=putative propionyl-CoA synthetase;gbkey=CDS;gene=prpE;product=propionate--CoA ligase;protein_id=NP_414869.1;transl_table=11 NC_000913.3 RefSeq repeat_region 354599 354769 . + . ID=id52;Note=REP26 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 354922 356181 . + . ID=gene345;Dbxref=EcoGene:EG11327,GeneID:944994;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;gene_synonym=ECK0333,JW0327;locus_tag=b0336 NC_000913.3 RefSeq CDS 354922 356181 . + 0 ID=cds332;Parent=gene345;Dbxref=ASAP:ABE-0001159,UniProtKB/Swiss-Prot:P0AA82,Genbank:NP_414870.1,EcoGene:EG11327,GeneID:944994;Name=NP_414870.1;Note=cytosine permease/transport;gbkey=CDS;gene=codB;product=cytosine transporter;protein_id=NP_414870.1;transl_table=11 NC_000913.3 RefSeq gene 356171 357454 . + . ID=gene346;Dbxref=EcoGene:EG11326,GeneID:944996;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;gene_synonym=ECK0334,JW0328;locus_tag=b0337 NC_000913.3 RefSeq CDS 356171 357454 . + 0 ID=cds333;Parent=gene346;Dbxref=ASAP:ABE-0001161,UniProtKB/Swiss-Prot:P25524,Genbank:NP_414871.1,EcoGene:EG11326,GeneID:944996;Name=NP_414871.1;gbkey=CDS;gene=codA;product=cytosine/isoguanine deaminase;protein_id=NP_414871.1;transl_table=11 NC_000913.3 RefSeq repeat_region 357484 357562 . + . ID=id53;Note=REP27 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq repeat_region 357684 357762 . + . ID=id54;Note=REP28 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 357791 358690 . - . ID=gene347;Dbxref=EcoGene:EG11421,GeneID:945001;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;gene_synonym=ECK0335,JW5894;locus_tag=b0338 NC_000913.3 RefSeq CDS 357791 358690 . - 0 ID=cds334;Parent=gene347;Dbxref=ASAP:ABE-0001165,UniProtKB/Swiss-Prot:P27111,Genbank:NP_414872.3,EcoGene:EG11421,GeneID:945001;Name=NP_414872.3;Note=cyn operon positive regulator;gbkey=CDS;gene=cynR;product=transcriptional activator of cyn operon%3B autorepressor;protein_id=NP_414872.3;transl_table=11 NC_000913.3 RefSeq gene 358799 359458 . + . ID=gene348;Dbxref=EcoGene:EG10176,GeneID:946548;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;gene_synonym=ECK0336,JW0330;locus_tag=b0339 NC_000913.3 RefSeq CDS 358799 359458 . + 0 ID=cds335;Parent=gene348;Dbxref=ASAP:ABE-0001171,UniProtKB/Swiss-Prot:P0ABE9,Genbank:NP_414873.1,EcoGene:EG10176,GeneID:946548;Name=NP_414873.1;gbkey=CDS;gene=cynT;product=carbonic anhydrase;protein_id=NP_414873.1;transl_table=11 NC_000913.3 RefSeq gene 359489 359959 . + . ID=gene349;Dbxref=EcoGene:EG10175,GeneID:948998;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;gene_synonym=cnt,ECK0337,JW0331;locus_tag=b0340 NC_000913.3 RefSeq CDS 359489 359959 . + 0 ID=cds336;Parent=gene349;Dbxref=ASAP:ABE-0001173,UniProtKB/Swiss-Prot:P00816,Genbank:NP_414874.1,EcoGene:EG10175,GeneID:948998;Name=NP_414874.1;Note=cyanate aminohydrolase%2C cyanase;gbkey=CDS;gene=cynS;product=cyanate aminohydrolase;protein_id=NP_414874.1;transl_table=11 NC_000913.3 RefSeq gene 359992 361146 . + . ID=gene350;Dbxref=EcoGene:EG10177,GeneID:946770;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;gene_synonym=ECK0338,JW0332;locus_tag=b0341 NC_000913.3 RefSeq CDS 359992 361146 . + 0 ID=cds337;Parent=gene350;Dbxref=ASAP:ABE-0001175,UniProtKB/Swiss-Prot:P17583,Genbank:NP_414875.1,EcoGene:EG10177,GeneID:946770;Name=NP_414875.1;Note=cyanate transport;gbkey=CDS;gene=cynX;product=putative cyanate transporter;protein_id=NP_414875.1;transl_table=11 NC_000913.3 RefSeq repeat_region 361208 361236 . + . ID=id55;Note=REP29 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 361249 361860 . - . ID=gene351;Dbxref=EcoGene:EG10524,GeneID:945674;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;gene_synonym=ECK0339,JW0333;locus_tag=b0342 NC_000913.3 RefSeq CDS 361249 361860 . - 0 ID=cds338;Parent=gene351;Dbxref=ASAP:ABE-0001177,UniProtKB/Swiss-Prot:P07464,Genbank:NP_414876.1,EcoGene:EG10524,GeneID:945674;Name=NP_414876.1;gbkey=CDS;gene=lacA;product=thiogalactoside acetyltransferase;protein_id=NP_414876.1;transl_table=11 NC_000913.3 RefSeq repeat_region 361883 361916 . + . ID=id56;Note=REP30 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 361926 363179 . - . ID=gene352;Dbxref=EcoGene:EG10526,GeneID:949083;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;gene_synonym=ECK0340,JW0334;locus_tag=b0343 NC_000913.3 RefSeq CDS 361926 363179 . - 0 ID=cds339;Parent=gene352;Dbxref=ASAP:ABE-0001181,UniProtKB/Swiss-Prot:P02920,Genbank:NP_414877.1,EcoGene:EG10526,GeneID:949083;Name=NP_414877.1;Note=galactoside permease (lactose permease%2C M protein) (MFS family);gbkey=CDS;gene=lacY;product=lactose permease;protein_id=NP_414877.1;transl_table=11 NC_000913.3 RefSeq gene 363231 366305 . - . ID=gene353;Dbxref=EcoGene:EG10527,GeneID:945006;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;gene_synonym=ECK0341,JW0335;locus_tag=b0344 NC_000913.3 RefSeq CDS 363231 366305 . - 0 ID=cds340;Parent=gene353;Dbxref=ASAP:ABE-0001183,UniProtKB/Swiss-Prot:P00722,Genbank:NP_414878.1,EcoGene:EG10527,GeneID:945006;Name=NP_414878.1;gbkey=CDS;gene=lacZ;product=beta-D-galactosidase;protein_id=NP_414878.1;transl_table=11 NC_000913.3 RefSeq gene 366428 367510 . - . ID=gene354;Dbxref=EcoGene:EG10525,GeneID:945007;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;gene_synonym=ECK0342,JW0336;locus_tag=b0345 NC_000913.3 RefSeq CDS 366428 367510 . - 0 ID=cds341;Parent=gene354;Dbxref=ASAP:ABE-0001189,UniProtKB/Swiss-Prot:P03023,Genbank:NP_414879.3,EcoGene:EG10525,GeneID:945007;Name=NP_414879.3;Note=transcriptional repressor of the lac operon;gbkey=CDS;gene=lacI;product=lactose-inducible lac operon transcriptional repressor;protein_id=NP_414879.3;transl_table=11 NC_000913.3 RefSeq gene 367587 368420 . - . ID=gene355;Dbxref=EcoGene:EG20276,GeneID:945938;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;gene_synonym=ECK0343,JW0337;locus_tag=b0346 NC_000913.3 RefSeq CDS 367587 368420 . - 0 ID=cds342;Parent=gene355;Dbxref=ASAP:ABE-0001191,UniProtKB/Swiss-Prot:P77569,Genbank:NP_414880.2,EcoGene:EG20276,GeneID:945938;Name=NP_414880.2;Note=transcriptional regulator for mhp operon;gbkey=CDS;gene=mhpR;product=mhp operon transcriptional activator;protein_id=NP_414880.2;transl_table=11 NC_000913.3 RefSeq gene 368611 370275 . + . ID=gene356;Dbxref=EcoGene:EG20273,GeneID:945197;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;gene_synonym=ECK0344,JW0338;locus_tag=b0347 NC_000913.3 RefSeq CDS 368611 370275 . + 0 ID=cds343;Parent=gene356;Dbxref=ASAP:ABE-0001196,UniProtKB/Swiss-Prot:P77397,Genbank:NP_414881.1,EcoGene:EG20273,GeneID:945197;Name=NP_414881.1;gbkey=CDS;gene=mhpA;product=3-(3-hydroxyphenyl)propionate hydroxylase;protein_id=NP_414881.1;transl_table=11 NC_000913.3 RefSeq gene 370277 371221 . + . ID=gene357;Dbxref=EcoGene:EG20274,GeneID:945047;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;gene_synonym=ECK0345,JW0339;locus_tag=b0348 NC_000913.3 RefSeq CDS 370277 371221 . + 0 ID=cds344;Parent=gene357;Dbxref=ASAP:ABE-0001198,UniProtKB/Swiss-Prot:P0ABR9,Genbank:NP_414882.1,EcoGene:EG20274,GeneID:945047;Name=NP_414882.1;gbkey=CDS;gene=mhpB;product=2%2C3-dihydroxyphenylpropionate 1%2C2-dioxygenase;protein_id=NP_414882.1;transl_table=11 NC_000913.3 RefSeq gene 371239 372105 . + . ID=gene358;Dbxref=EcoGene:EG20275,GeneID:944954;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;gene_synonym=ECK0346,JW0340;locus_tag=b0349 NC_000913.3 RefSeq CDS 371239 372105 . + 0 ID=cds345;Parent=gene358;Dbxref=ASAP:ABE-0001201,UniProtKB/Swiss-Prot:P77044,Genbank:NP_414883.5,EcoGene:EG20275,GeneID:944954;Name=NP_414883.5;gbkey=CDS;gene=mhpC;product=2-hydroxy-6-ketonona-2%2C4-dienedioic acid hydrolase;protein_id=NP_414883.5;transl_table=11 NC_000913.3 RefSeq gene 372115 372924 . + . ID=gene359;Dbxref=EcoGene:EG14274,GeneID:944768;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;gene_synonym=ECK0347,JW0341,mhpS;locus_tag=b0350 NC_000913.3 RefSeq CDS 372115 372924 . + 0 ID=cds346;Parent=gene359;Dbxref=ASAP:ABE-0001205,UniProtKB/Swiss-Prot:P77608,Genbank:NP_414884.2,EcoGene:EG14274,GeneID:944768;Name=NP_414884.2;gbkey=CDS;gene=mhpD;product=2-keto-4-pentenoate hydratase;protein_id=NP_414884.2;transl_table=11 NC_000913.3 RefSeq gene 372921 373871 . + . ID=gene360;Dbxref=EcoGene:EG13625,GeneID:945008;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;gene_synonym=ECK0348,JW0342;locus_tag=b0351 NC_000913.3 RefSeq CDS 372921 373871 . + 0 ID=cds347;Parent=gene360;Dbxref=ASAP:ABE-0001207,UniProtKB/Swiss-Prot:P77580,Genbank:NP_414885.1,EcoGene:EG13625,GeneID:945008;Name=NP_414885.1;Note=acetaldehyde dehydrogenase;gbkey=CDS;gene=mhpF;product=acetaldehyde-CoA dehydrogenase II%2C NAD-binding;protein_id=NP_414885.1;transl_table=11 NC_000913.3 RefSeq gene 373868 374881 . + . ID=gene361;Dbxref=EcoGene:EG13292,GeneID:945012;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;gene_synonym=ECK0349,JW0343;locus_tag=b0352 NC_000913.3 RefSeq CDS 373868 374881 . + 0 ID=cds348;Parent=gene361;Dbxref=ASAP:ABE-0001209,UniProtKB/Swiss-Prot:P51020,Genbank:NP_414886.1,EcoGene:EG13292,GeneID:945012;Name=NP_414886.1;Note=4-hydroxy-2-ketovalerate aldolase;gbkey=CDS;gene=mhpE;product=4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase%2C class I;protein_id=NP_414886.1;transl_table=11 NC_000913.3 RefSeq repeat_region 374930 375365 . + . ID=id57;Note=REP31 (repetitive extragenic palindromic) element%3B contains 9 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 375459 376670 . + . ID=gene362;Dbxref=EcoGene:EG13293,GeneID:944997;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;gene_synonym=ECK0350,JW5046,yaiK;locus_tag=b0353 NC_000913.3 RefSeq CDS 375459 376670 . + 0 ID=cds349;Parent=gene362;Dbxref=ASAP:ABE-0001213,UniProtKB/Swiss-Prot:P77589,Genbank:NP_414887.2,EcoGene:EG13293,GeneID:944997;Name=NP_414887.2;Note=putative transport protein;gbkey=CDS;gene=mhpT;product=3-hydroxyphenylpropionic transporter;protein_id=NP_414887.2;transl_table=11 NC_000913.3 RefSeq gene 376772 377311 . + . ID=gene363;Dbxref=EcoGene:EG13294,GeneID:944993;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;gene_synonym=ECK0351,JW0345;locus_tag=b0354 NC_000913.3 RefSeq CDS 376772 377311 . + 0 ID=cds350;Parent=gene363;Dbxref=ASAP:ABE-0001216,UniProtKB/Swiss-Prot:P51024,Genbank:NP_414888.4,EcoGene:EG13294,GeneID:944993;Name=NP_414888.4;gbkey=CDS;gene=yaiL;product=DUF2058 family protein;protein_id=NP_414888.4;transl_table=11 NC_000913.3 RefSeq repeat_region 377335 377521 . + . ID=id58;Note=REP32 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 377535 378368 . - . ID=gene364;Dbxref=EcoGene:EG13295,GeneID:944991;Name=frmB;gbkey=Gene;gene=frmB;gene_biotype=protein_coding;gene_synonym=ECK0352,JW0346,yaiM;locus_tag=b0355 NC_000913.3 RefSeq CDS 377535 378368 . - 0 ID=cds351;Parent=gene364;Dbxref=ASAP:ABE-0001219,UniProtKB/Swiss-Prot:P51025,Genbank:NP_414889.1,EcoGene:EG13295,GeneID:944991;Name=NP_414889.1;Note=putative S-formylglutathione hydrolase;gbkey=CDS;gene=frmB;product=S-formylglutathione hydrolase;protein_id=NP_414889.1;transl_table=11 NC_000913.3 RefSeq gene 378462 379571 . - . ID=gene365;Dbxref=EcoGene:EG50010,GeneID:944988;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;gene_synonym=adhC,ECK0353,JW0347;locus_tag=b0356 NC_000913.3 RefSeq CDS 378462 379571 . - 0 ID=cds352;Parent=gene365;Dbxref=ASAP:ABE-0001221,UniProtKB/Swiss-Prot:P25437,Genbank:NP_414890.1,EcoGene:EG50010,GeneID:944988;Name=NP_414890.1;Note=alcohol dehydrogenase class III%3B formaldehyde dehydrogenase%2C glutathione-dependent;gbkey=CDS;gene=frmA;product=alcohol dehydrogenase class III%3B glutathione-dependent formaldehyde dehydrogenase;protein_id=NP_414890.1;transl_table=11 NC_000913.3 RefSeq gene 379606 379881 . - . ID=gene366;Dbxref=EcoGene:EG13296,GeneID:944986;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;gene_synonym=ECK0354,JW0348,yaiN;locus_tag=b0357 NC_000913.3 RefSeq CDS 379606 379881 . - 0 ID=cds353;Parent=gene366;Dbxref=ASAP:ABE-0001226,UniProtKB/Swiss-Prot:P0AAP3,Genbank:NP_414891.4,EcoGene:EG13296,GeneID:944986;Name=NP_414891.4;Note=repressor of frmRAB;gbkey=CDS;gene=frmR;product=regulator protein that represses frmRAB operon;protein_id=NP_414891.4;transl_table=11 NC_000913.3 RefSeq gene 380069 380842 . - . ID=gene367;Dbxref=EcoGene:EG13297,GeneID:945014;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;gene_synonym=ECK0355,JW0349;locus_tag=b0358 NC_000913.3 RefSeq CDS 380069 380842 . - 0 ID=cds354;Parent=gene367;Dbxref=ASAP:ABE-0001230,UniProtKB/Swiss-Prot:Q47534,Genbank:NP_414892.1,EcoGene:EG13297,GeneID:945014;Name=NP_414892.1;gbkey=CDS;gene=yaiO;product=outer membrane protein;protein_id=NP_414892.1;transl_table=11 NC_000913.3 RefSeq gene 382591 382872 . - . ID=gene368;Dbxref=EcoGene:EG14236,GeneID:4056039;Name=yaiX;gbkey=Gene;gene=yaiX;gene_biotype=pseudogene;gene_synonym=ECK0356,JW0350,yaiF;locus_tag=b4579;part=1/2;pseudo=true NC_000913.3 RefSeq gene 380844 381260 . - . ID=gene368;Dbxref=EcoGene:EG14236,GeneID:4056039;Name=yaiX;gbkey=Gene;gene=yaiX;gene_biotype=pseudogene;gene_synonym=ECK0356,JW0350,yaiF;locus_tag=b4579;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 382591 382872 . - 0 ID=cds355;Parent=gene368;Dbxref=ASAP:ABE-0001232,ASAP:ABE-0001241,ASAP:ABE-0285111,UniProtKB/Swiss-Prot:P75697,EcoGene:EG14236,GeneID:4056039;Note=pseudogene%2C interrupted by IS2A%3B hexapeptide transferase superfamily~putative transferase;gbkey=CDS;gene=yaiX;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 380844 381260 . - 0 ID=cds355;Parent=gene368;Dbxref=ASAP:ABE-0001232,ASAP:ABE-0001241,ASAP:ABE-0285111,UniProtKB/Swiss-Prot:P75697,EcoGene:EG14236,GeneID:4056039;Note=pseudogene%2C interrupted by IS2A%3B hexapeptide transferase superfamily~putative transferase;gbkey=CDS;gene=yaiX;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 381260 382590 . + . ID=id59;gbkey=mobile_element;gene=yaiX NC_000913.3 RefSeq gene 381351 381716 . + . ID=gene369;Dbxref=EcoGene:EG40003,GeneID:945025;Name=insC1;gbkey=Gene;gene=insC1;gene_biotype=protein_coding;gene_synonym=ECK0357;locus_tag=b0360 NC_000913.3 RefSeq CDS 381351 381716 . + 0 ID=cds356;Parent=gene369;Dbxref=ASAP:ABE-0001237,UniProtKB/Swiss-Prot:P0CF40,Genbank:NP_414894.2,EcoGene:EG40003,GeneID:945025;Name=NP_414894.2;gbkey=CDS;gene=insC1;product=IS2 repressor TnpA;protein_id=NP_414894.2;transl_table=11 NC_000913.3 RefSeq gene 381674 382579 . + . ID=gene370;Dbxref=EcoGene:EG40004,GeneID:945203;Name=insD1;gbkey=Gene;gene=insD1;gene_biotype=protein_coding;gene_synonym=ECK0358;locus_tag=b0361 NC_000913.3 RefSeq CDS 381674 382579 . + 0 ID=cds357;Parent=gene370;Dbxref=ASAP:ABE-0001239,UniProtKB/Swiss-Prot:P0CF53,Genbank:NP_414895.1,EcoGene:EG40004,GeneID:945203;Name=NP_414895.1;gbkey=CDS;gene=insD1;product=IS2 transposase TnpB;protein_id=NP_414895.1;transl_table=11 NC_000913.3 RefSeq gene 382739 383935 . - . ID=gene371;Dbxref=EcoGene:EG13298,GeneID:945308;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;gene_synonym=ECK0360,JW0355;locus_tag=b0363 NC_000913.3 RefSeq CDS 382739 383935 . - 0 ID=cds358;Parent=gene371;Dbxref=ASAP:ABE-0001243,UniProtKB/Swiss-Prot:Q47536,Genbank:NP_414897.1,EcoGene:EG13298,GeneID:945308;Name=NP_414897.1;Note=polysaccharide metabolism;gbkey=CDS;gene=yaiP;product=putative family 2 glycosyltransferase;protein_id=NP_414897.1;transl_table=11 NC_000913.3 RefSeq gene 384059 384616 . - . ID=gene372;Dbxref=EcoGene:EG13302,GeneID:946967;Name=yaiS;gbkey=Gene;gene=yaiS;gene_biotype=protein_coding;gene_synonym=ECK0361,JW0356;locus_tag=b0364 NC_000913.3 RefSeq CDS 384059 384616 . - 0 ID=cds359;Parent=gene372;Dbxref=ASAP:ABE-0001249,UniProtKB/Swiss-Prot:P71311,Genbank:NP_414898.4,EcoGene:EG13302,GeneID:946967;Name=NP_414898.4;gbkey=CDS;gene=yaiS;product=putative PIG-L family deacetylase;protein_id=NP_414898.4;transl_table=11 NC_000913.3 RefSeq gene 385232 386194 . + . ID=gene373;Dbxref=EcoGene:EG13300,GeneID:945030;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;gene_synonym=ECK0362,JW0357,ssiA,yaiR;locus_tag=b0365 NC_000913.3 RefSeq CDS 385232 386194 . + 0 ID=cds360;Parent=gene373;Dbxref=ASAP:ABE-0001256,UniProtKB/Swiss-Prot:Q47537,Genbank:NP_414899.2,EcoGene:EG13300,GeneID:945030;Name=NP_414899.2;Note=taurine transport system periplasmic protein;gbkey=CDS;gene=tauA;product=taurine ABC transporter periplasmic binding protein;protein_id=NP_414899.2;transl_table=11 NC_000913.3 RefSeq gene 386207 386974 . + . ID=gene374;Dbxref=EcoGene:EG13299,GeneID:945027;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;gene_synonym=ECK0363,JW0358,ssiB,yaiQ;locus_tag=b0366 NC_000913.3 RefSeq CDS 386207 386974 . + 0 ID=cds361;Parent=gene374;Dbxref=ASAP:ABE-0001259,UniProtKB/Swiss-Prot:Q47538,Genbank:NP_414900.1,EcoGene:EG13299,GeneID:945027;Name=NP_414900.1;Note=taurine ATP-binding component of a transport system;gbkey=CDS;gene=tauB;product=taurine ABC transporter ATPase;protein_id=NP_414900.1;transl_table=11 NC_000913.3 RefSeq gene 386971 387798 . + . ID=gene375;Dbxref=EcoGene:EG13301,GeneID:945026;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;gene_synonym=ECK0364,JW0359,ssiC,yaiJ;locus_tag=b0367 NC_000913.3 RefSeq CDS 386971 387798 . + 0 ID=cds362;Parent=gene375;Dbxref=ASAP:ABE-0001261,UniProtKB/Swiss-Prot:Q47539,Genbank:NP_414901.1,EcoGene:EG13301,GeneID:945026;Name=NP_414901.1;Note=taurine transport system permease protein;gbkey=CDS;gene=tauC;product=taurine ABC transporter permease;protein_id=NP_414901.1;transl_table=11 NC_000913.3 RefSeq gene 387795 388646 . + . ID=gene376;Dbxref=EcoGene:EG12423,GeneID:945021;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;gene_synonym=ECK0365,JW0360,ssiD,yaiG;locus_tag=b0368 NC_000913.3 RefSeq CDS 387795 388646 . + 0 ID=cds363;Parent=gene376;Dbxref=ASAP:ABE-0001263,UniProtKB/Swiss-Prot:P37610,Genbank:NP_414902.1,EcoGene:EG12423,GeneID:945021;Name=NP_414902.1;gbkey=CDS;gene=tauD;product=taurine dioxygenase%2C 2-oxoglutarate-dependent;protein_id=NP_414902.1;transl_table=11 NC_000913.3 RefSeq gene 388753 389727 . - . ID=gene377;Dbxref=EcoGene:EG10428,GeneID:945017;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;gene_synonym=ECK0366,JW0361,ncf;locus_tag=b0369 NC_000913.3 RefSeq CDS 388753 389727 . - 0 ID=cds364;Parent=gene377;Dbxref=ASAP:ABE-0001266,UniProtKB/Swiss-Prot:P0ACB2,Genbank:NP_414903.4,EcoGene:EG10428,GeneID:945017;Name=NP_414903.4;Note=5-aminolevulinate dehydratase %3D porphobilinogen synthase;gbkey=CDS;gene=hemB;product=5-aminolevulinate dehydratase (porphobilinogen synthase);protein_id=NP_414903.4;transl_table=11 NC_000913.3 RefSeq gene 390251 391708 . + . ID=gene378;Dbxref=EcoGene:EG13605,GeneID:4056040;Name=yaiT;gbkey=Gene;gene=yaiT;gene_biotype=pseudogene;gene_synonym=ECK0368,JW0362,yaiU;locus_tag=b4580;part=1/2;pseudo=true NC_000913.3 RefSeq gene 392970 394418 . + . ID=gene378;Dbxref=EcoGene:EG13605,GeneID:4056040;Name=yaiT;gbkey=Gene;gene=yaiT;gene_biotype=pseudogene;gene_synonym=ECK0368,JW0362,yaiU;locus_tag=b4580;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 390251 391708 . + 0 ID=cds365;Parent=gene378;Dbxref=ASAP:ABE-0001274,ASAP:ABE-0001288,ASAP:ABE-0285112,UniProtKB/Swiss-Prot:P77199,EcoGene:EG13605,GeneID:4056040;Note=pseudogene%2C autotransporter family%3Bputative structure%3B Not classified~interrupted by IS3~putative flagellin structural protein;gbkey=CDS;gene=yaiT;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 392970 394418 . + 0 ID=cds365;Parent=gene378;Dbxref=ASAP:ABE-0001274,ASAP:ABE-0001288,ASAP:ABE-0285112,UniProtKB/Swiss-Prot:P77199,EcoGene:EG13605,GeneID:4056040;Note=pseudogene%2C autotransporter family%3Bputative structure%3B Not classified~interrupted by IS3~putative flagellin structural protein;gbkey=CDS;gene=yaiT;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 391709 392966 . - . ID=id60;gbkey=mobile_element NC_000913.3 RefSeq gene 391739 392605 . - . ID=gene379;Dbxref=EcoGene:EG40006,GeneID:945036;Name=insF1;gbkey=Gene;gene=insF1;gene_biotype=protein_coding;gene_synonym=ECK0299;locus_tag=b0372 NC_000913.3 RefSeq CDS 391739 392605 . - 0 ID=cds366;Parent=gene379;Dbxref=ASAP:ABE-0001277,UniProtKB/Swiss-Prot:P0CF80,Genbank:NP_414906.1,EcoGene:EG40006,GeneID:945036;Name=NP_414906.1;gbkey=CDS;gene=insF1;product=IS3 transposase B;protein_id=NP_414906.1;transl_table=11 NC_000913.3 RefSeq gene 392602 392901 . - . ID=gene380;Dbxref=EcoGene:EG40005,GeneID:946900;Name=insE1;gbkey=Gene;gene=insE1;gene_biotype=protein_coding;gene_synonym=ECK0298;locus_tag=b0373 NC_000913.3 RefSeq CDS 392602 392901 . - 0 ID=cds367;Parent=gene380;Dbxref=ASAP:ABE-0001279,UniProtKB/Swiss-Prot:P0CF67,Genbank:NP_414907.2,EcoGene:EG40005,GeneID:946900;Name=NP_414907.2;gbkey=CDS;gene=insE1;product=IS3 transposase A;protein_id=NP_414907.2;transl_table=11 NC_000913.3 RefSeq gene 394506 395129 . + . ID=gene381;Dbxref=EcoGene:EG13607,GeneID:946902;Name=yaiV;gbkey=Gene;gene=yaiV;gene_biotype=protein_coding;gene_synonym=ECK0370,JW0366;locus_tag=b0375 NC_000913.3 RefSeq CDS 394506 395129 . + 0 ID=cds368;Parent=gene381;Dbxref=ASAP:ABE-0001290,UniProtKB/Swiss-Prot:P0AAP5,Genbank:NP_414909.2,EcoGene:EG13607,GeneID:946902;Name=NP_414909.2;gbkey=CDS;gene=yaiV;product=putative transcriptional regulator;protein_id=NP_414909.2;transl_table=11 NC_000913.3 RefSeq gene 395130 396287 . - . ID=gene382;Dbxref=EcoGene:EG12867,GeneID:946904;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;gene_synonym=ECK0371,JW5052,yaiH;locus_tag=b0376 NC_000913.3 RefSeq CDS 395130 396287 . - 0 ID=cds369;Parent=gene382;Dbxref=ASAP:ABE-0001292,UniProtKB/Swiss-Prot:P0AD70,Genbank:NP_414910.1,EcoGene:EG12867,GeneID:946904;Name=NP_414910.1;gbkey=CDS;gene=ampH;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase%3B penicillin-binding protein%3B weak beta-lactamase;protein_id=NP_414910.1;transl_table=11 NC_000913.3 RefSeq gene 396639 397859 . + . ID=gene383;Dbxref=EcoGene:EG10928,GeneID:946884;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;gene_synonym=ECK0372,JW0368;locus_tag=b0377 NC_000913.3 RefSeq CDS 396639 397859 . + 0 ID=cds370;Parent=gene383;Dbxref=ASAP:ABE-0001297,UniProtKB/Swiss-Prot:P0AFY6,Genbank:NP_414911.1,EcoGene:EG10928,GeneID:946884;Name=NP_414911.1;Note=sensitivity to microcin B17%2C possibly envelop protein;gbkey=CDS;gene=sbmA;product=peptide antibiotic transporter;protein_id=NP_414911.1;transl_table=11 NC_000913.3 RefSeq gene 397872 398966 . + . ID=gene384;Dbxref=EcoGene:EG13608,GeneID:945038;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;gene_synonym=ECK0373,JW0369;locus_tag=b0378 NC_000913.3 RefSeq CDS 397872 398966 . + 0 ID=cds371;Parent=gene384;Dbxref=ASAP:ABE-0001299,UniProtKB/Swiss-Prot:P77562,Genbank:NP_414912.1,EcoGene:EG13608,GeneID:945038;Name=NP_414912.1;gbkey=CDS;gene=yaiW;product=microcin Bac7 uptake protein%3B outer membrane surface-exposed lipoprotein;protein_id=NP_414912.1;transl_table=11 NC_000913.3 RefSeq repeat_region 398980 399014 . + . ID=id61;Note=REP33 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 399025 399333 . - . ID=gene385;Dbxref=EcoGene:EG14279,GeneID:945223;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;gene_synonym=ECK0374,JW0370;locus_tag=b0379 NC_000913.3 RefSeq CDS 399025 399333 . - 0 ID=cds372;Parent=gene385;Dbxref=ASAP:ABE-0001302,UniProtKB/Swiss-Prot:P0AAP7,Genbank:NP_414913.1,EcoGene:EG14279,GeneID:945223;Name=NP_414913.1;gbkey=CDS;gene=yaiY;product=DUF2755 family inner membrane protein;protein_id=NP_414913.1;transl_table=11 NC_000913.3 RefSeq gene 399593 399805 . + . ID=gene386;Dbxref=EcoGene:EG14280,GeneID:947355;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;gene_synonym=ECK0375,JW5053;locus_tag=b0380 NC_000913.3 RefSeq CDS 399593 399805 . + 0 ID=cds373;Parent=gene386;Dbxref=ASAP:ABE-0001307,UniProtKB/Swiss-Prot:P0AAQ0,Genbank:NP_414914.2,EcoGene:EG14280,GeneID:947355;Name=NP_414914.2;gbkey=CDS;gene=yaiZ;product=DUF2754 family putative inner membrane protein;protein_id=NP_414914.2;transl_table=11 NC_000913.3 RefSeq gene 399829 400923 . - . ID=gene387;Dbxref=EcoGene:EG10213,GeneID:945313;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;gene_synonym=ECK0376,JW0372;locus_tag=b0381 NC_000913.3 RefSeq CDS 399829 400923 . - 0 ID=cds374;Parent=gene387;Dbxref=ASAP:ABE-0001309,UniProtKB/Swiss-Prot:P0A6J8,Genbank:NP_414915.1,EcoGene:EG10213,GeneID:945313;Name=NP_414915.1;gbkey=CDS;gene=ddlA;product=D-alanine-D-alanine ligase A;protein_id=NP_414915.1;transl_table=11 NC_000913.3 RefSeq gene 401386 401646 . + . ID=gene388;Dbxref=EcoGene:EG11256,GeneID:947709;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;gene_synonym=ECK0377,JW0373,yaiB;locus_tag=b0382 NC_000913.3 RefSeq CDS 401386 401646 . + 0 ID=cds375;Parent=gene388;Dbxref=ASAP:ABE-0001313,UniProtKB/Swiss-Prot:P0AAN9,Genbank:NP_414916.1,EcoGene:EG11256,GeneID:947709;Name=NP_414916.1;gbkey=CDS;gene=iraP;product=anti-RssB factor%2C RpoS stabilzer during Pi starvation%3B anti-adapter protein;protein_id=NP_414916.1;transl_table=11 NC_000913.3 RefSeq gene 401747 403162 . + . ID=gene389;Dbxref=EcoGene:EG10727,GeneID:945041;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;gene_synonym=ECK0378,JW0374,psiA;locus_tag=b0383 NC_000913.3 RefSeq CDS 401747 403162 . + 0 ID=cds376;Parent=gene389;Dbxref=ASAP:ABE-0001328,UniProtKB/Swiss-Prot:P00634,Genbank:NP_414917.2,EcoGene:EG10727,GeneID:945041;Name=NP_414917.2;Note=alkaline phosphatase~start codon corrected;gbkey=CDS;gene=phoA;product=bacterial alkaline phosphatase;protein_id=NP_414917.2;transl_table=11 NC_000913.3 RefSeq gene 403281 403601 . + . ID=gene390;Dbxref=EcoGene:EG11401,GeneID:945040;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;gene_synonym=ECK0379,JW5054;locus_tag=b0384 NC_000913.3 RefSeq CDS 403281 403601 . + 0 ID=cds377;Parent=gene390;Dbxref=ASAP:ABE-0001330,UniProtKB/Swiss-Prot:P0AFM4,Genbank:NP_414918.4,EcoGene:EG11401,GeneID:945040;Name=NP_414918.4;Note=induced by phosphate starvation;gbkey=CDS;gene=psiF;product=PsiF family protein;protein_id=NP_414918.4;transl_table=11 NC_000913.3 RefSeq gene 403703 404818 . + . ID=gene391;Dbxref=EcoGene:EG11257,GeneID:945037;Name=yaiC;gbkey=Gene;gene=yaiC;gene_biotype=protein_coding;gene_synonym=adrA,ECK0380,JW0376;locus_tag=b0385 NC_000913.3 RefSeq CDS 403703 404818 . + 0 ID=cds378;Parent=gene391;Dbxref=ASAP:ABE-0001336,UniProtKB/Swiss-Prot:P0AAP1,Genbank:NP_414919.1,EcoGene:EG11257,GeneID:945037;Name=NP_414919.1;gbkey=CDS;gene=yaiC;product=diguanylate cyclase%2C cellulose regualtor;protein_id=NP_414919.1;transl_table=11 NC_000913.3 RefSeq gene 404835 405644 . - . ID=gene392;Dbxref=EcoGene:EG10769,GeneID:945034;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;gene_synonym=ECK0381,JW0377,pro,Pro2;locus_tag=b0386 NC_000913.3 RefSeq CDS 404835 405644 . - 0 ID=cds379;Parent=gene392;Dbxref=ASAP:ABE-0001338,UniProtKB/Swiss-Prot:P0A9L8,Genbank:NP_414920.1,EcoGene:EG10769,GeneID:945034;Name=NP_414920.1;Note=pyrroline-5-carboxylate reductase;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase%2C NAD(P)-binding;protein_id=NP_414920.1;transl_table=11 NC_000913.3 RefSeq gene 405764 406222 . + . ID=gene393;Dbxref=EcoGene:EG13176,GeneID:945033;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;gene_synonym=ECK0382,JW0378;locus_tag=b0387 NC_000913.3 RefSeq CDS 405764 406222 . + 0 ID=cds380;Parent=gene393;Dbxref=ASAP:ABE-0001344,UniProtKB/Swiss-Prot:P0A8D3,Genbank:NP_414921.2,EcoGene:EG13176,GeneID:945033;Name=NP_414921.2;gbkey=CDS;gene=yaiI;product=UPF0178 family protein;protein_id=NP_414921.2;transl_table=11 NC_000913.3 RefSeq gene 406405 406929 . + . ID=gene394;Dbxref=EcoGene:EG10082,GeneID:945031;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;gene_synonym=ECK0383,JW0379;locus_tag=b0388 NC_000913.3 RefSeq CDS 406405 406929 . + 0 ID=cds381;Parent=gene394;Dbxref=ASAP:ABE-0001353,UniProtKB/Swiss-Prot:P0A6E1,Genbank:NP_414922.1,EcoGene:EG10082,GeneID:945031;Name=NP_414922.1;gbkey=CDS;gene=aroL;product=shikimate kinase II;protein_id=NP_414922.1;transl_table=11 NC_000913.3 RefSeq gene 406979 407170 . + . ID=gene395;Dbxref=EcoGene:EG11093,GeneID:945043;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;gene_synonym=ECK0384,JW0380;locus_tag=b0389 NC_000913.3 RefSeq CDS 406979 407170 . + 0 ID=cds382;Parent=gene395;Dbxref=ASAP:ABE-0001355,UniProtKB/Swiss-Prot:P0AAN5,Genbank:NP_414923.1,EcoGene:EG11093,GeneID:945043;Name=NP_414923.1;gbkey=CDS;gene=yaiA;product=OxyR-regulated conserved protein;protein_id=NP_414923.1;transl_table=11 NC_000913.3 RefSeq gene 407428 408105 . + . ID=gene396;Dbxref=EcoGene:EG10083,GeneID:945045;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;gene_synonym=ECK0385,JW0381;locus_tag=b0390 NC_000913.3 RefSeq CDS 407428 408105 . + 0 ID=cds383;Parent=gene396;Dbxref=ASAP:ABE-0001357,UniProtKB/Swiss-Prot:P0AE28,Genbank:NP_414924.1,EcoGene:EG10083,GeneID:945045;Name=NP_414924.1;Note=protein of aro operon%2C regulated by aroR;gbkey=CDS;gene=aroM;product=AroM family protein;protein_id=NP_414924.1;transl_table=11 NC_000913.3 RefSeq gene 408177 408461 . + . ID=gene397;Dbxref=EcoGene:EG12159,GeneID:945048;Name=yaiE;gbkey=Gene;gene=yaiE;gene_biotype=protein_coding;gene_synonym=ECK0386,JW0382;locus_tag=b0391 NC_000913.3 RefSeq CDS 408177 408461 . + 0 ID=cds384;Parent=gene397;Dbxref=ASAP:ABE-0001360,UniProtKB/Swiss-Prot:P0C037,Genbank:NP_414925.1,EcoGene:EG12159,GeneID:945048;Name=NP_414925.1;gbkey=CDS;gene=yaiE;product=UPF0345 family protein;protein_id=NP_414925.1;transl_table=11 NC_000913.3 RefSeq gene 408609 408950 . + . ID=gene398;Dbxref=EcoGene:EG14282,GeneID:945423;Name=ykiA;gbkey=Gene;gene=ykiA;gene_biotype=pseudogene;gene_synonym=ECK0387,JW0383;locus_tag=b0392;pseudo=true NC_000913.3 RefSeq CDS 408609 408950 . + 0 ID=cds385;Parent=gene398;Dbxref=ASAP:ABE-0001363,UniProtKB/Swiss-Prot:P75704,EcoGene:EG14282,GeneID:945423;Note=pseudogene;gbkey=CDS;gene=ykiA;pseudo=true;transl_table=11 NC_000913.3 RefSeq repeat_region 409052 409088 . + . ID=id62;Note=REP34 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 409108 410019 . - . ID=gene399;Dbxref=EcoGene:EG12158,GeneID:948585;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;gene_synonym=ECK0388,JW0384,yaiD;locus_tag=b0393 NC_000913.3 RefSeq CDS 409108 410019 . - 0 ID=cds386;Parent=gene399;Dbxref=ASAP:ABE-0001366,UniProtKB/Swiss-Prot:P36767,Genbank:NP_414927.1,EcoGene:EG12158,GeneID:948585;Name=NP_414927.1;gbkey=CDS;gene=rdgC;product=nucleoid-associated ssDNA and dsDNA binding protein%3B competitive inhibitor of RecA function;protein_id=NP_414927.1;transl_table=11 NC_000913.3 RefSeq gene 410144 411052 . + . ID=gene400;Dbxref=EcoGene:EG11288,GeneID:949086;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;gene_synonym=ECK0389,JW0385,yajF;locus_tag=b0394 NC_000913.3 RefSeq CDS 410144 411052 . + 0 ID=cds387;Parent=gene400;Dbxref=ASAP:ABE-0001372,UniProtKB/Swiss-Prot:P23917,Genbank:NP_414928.2,EcoGene:EG11288,GeneID:949086;Name=NP_414928.2;Note=possible NAGC-like transcriptional regulator;gbkey=CDS;gene=mak;product=manno(fructo)kinase;protein_id=NP_414928.2;transl_table=11 NC_000913.3 RefSeq repeat_region 411078 411268 . + . ID=id63;Note=REP35 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 411297 412481 . - . ID=gene401;Dbxref=EcoGene:EG10060,GeneID:949077;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;gene_synonym=ECK0390,JW0386;locus_tag=b0396 NC_000913.3 RefSeq CDS 411297 412481 . - 0 ID=cds388;Parent=gene401;Dbxref=ASAP:ABE-0001378,UniProtKB/Swiss-Prot:P23910,Genbank:NP_414930.3,EcoGene:EG10060,GeneID:949077;Name=NP_414930.3;Note=involved in either transport or processing of arabinose polymers;gbkey=CDS;gene=araJ;product=L-arabinose-inducible putative transporter%2C MFS family;protein_id=NP_414930.3;transl_table=11 NC_000913.3 RefSeq gene 412607 415753 . - . ID=gene402;Dbxref=EcoGene:EG10927,GeneID:949076;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;gene_synonym=ECK0391,JW0387,rmuA;locus_tag=b0397 NC_000913.3 RefSeq CDS 412607 415753 . - 0 ID=cds389;Parent=gene402;Dbxref=ASAP:ABE-0001381,UniProtKB/Swiss-Prot:P13458,Genbank:NP_414931.1,EcoGene:EG10927,GeneID:949076;Name=NP_414931.1;Note=ATP-dependent dsDNA exonuclease;gbkey=CDS;gene=sbcC;product=exonuclease%2C dsDNA%2C ATP-dependent;protein_id=NP_414931.1;transl_table=11 NC_000913.3 RefSeq gene 415750 416952 . - . ID=gene403;Dbxref=EcoGene:EG11094,GeneID:945049;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;gene_synonym=ECK0392,JW0388,yajA;locus_tag=b0398 NC_000913.3 RefSeq CDS 415750 416952 . - 0 ID=cds390;Parent=gene403;Dbxref=ASAP:ABE-0001383,UniProtKB/Swiss-Prot:P0AG76,Genbank:NP_414932.1,EcoGene:EG11094,GeneID:945049;Name=NP_414932.1;Note=ATP-dependent dsDNA exonuclease;gbkey=CDS;gene=sbcD;product=exonuclease%2C dsDNA%2C ATP-dependent;protein_id=NP_414932.1;transl_table=11 NC_000913.3 RefSeq gene 417142 417831 . + . ID=gene404;Dbxref=EcoGene:EG10728,GeneID:945046;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;gene_synonym=ECK0393,JW0389,phoRc;locus_tag=b0399 NC_000913.3 RefSeq CDS 417142 417831 . + 0 ID=cds391;Parent=gene404;Dbxref=ASAP:ABE-0001389,UniProtKB/Swiss-Prot:P0AFJ5,Genbank:NP_414933.1,EcoGene:EG10728,GeneID:945046;Name=NP_414933.1;Note=positive response regulator for pho regulon%2C sensor is PhoR (or CreC);gbkey=CDS;gene=phoB;product=response regulator in two-component regulatory system with PhoR;protein_id=NP_414933.1;transl_table=11 NC_000913.3 RefSeq gene 417889 419184 . + . ID=gene405;Dbxref=EcoGene:EG10733,GeneID:945044;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;gene_synonym=ECK0394,JW0390,nmpB,phoR1,R1pho;locus_tag=b0400 NC_000913.3 RefSeq CDS 417889 419184 . + 0 ID=cds392;Parent=gene405;Dbxref=ASAP:ABE-0001391,UniProtKB/Swiss-Prot:P08400,Genbank:NP_414934.1,EcoGene:EG10733,GeneID:945044;Name=NP_414934.1;Note=positive and negative sensor protein for pho regulon;gbkey=CDS;gene=phoR;product=sensory histidine kinase in two-component regulatory system with PhoB;protein_id=NP_414934.1;transl_table=11 NC_000913.3 RefSeq gene 419591 420910 . + . ID=gene406;Dbxref=EcoGene:EG12168,GeneID:945042;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;gene_synonym=ECK0395,hrbA,JW0391;locus_tag=b0401 NC_000913.3 RefSeq CDS 419591 420910 . + 0 ID=cds393;Parent=gene406;Dbxref=ASAP:ABE-0001394,UniProtKB/Swiss-Prot:P0AD99,Genbank:NP_414935.1,EcoGene:EG12168,GeneID:945042;Name=NP_414935.1;Note=branched chain amino acid transport system II carrier protein;gbkey=CDS;gene=brnQ;product=branched-chain amino acid transport system 2 carrier protein%3B LIV-II transport system for Ile%2C Leu%2C and Val;protein_id=NP_414935.1;transl_table=11 NC_000913.3 RefSeq gene 420986 422359 . + . ID=gene407;Dbxref=EcoGene:EG13609,GeneID:945050;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;gene_synonym=ECK0396,hisY,JW5055,yajM;locus_tag=b0402 NC_000913.3 RefSeq CDS 420986 422359 . + 0 ID=cds394;Parent=gene407;Dbxref=ASAP:ABE-0001398,UniProtKB/Swiss-Prot:P0AAE2,Genbank:NP_414936.1,EcoGene:EG13609,GeneID:945050;Name=NP_414936.1;Note=proline permease transport protein;gbkey=CDS;gene=proY;product=proline-specific permease;protein_id=NP_414936.1;transl_table=11 NC_000913.3 RefSeq repeat_region 422372 422404 . + . ID=id64;Note=REP36 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 422518 424332 . + . ID=gene408;Dbxref=EcoGene:EG10565,GeneID:949131;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;gene_synonym=ECK0397,JW0393;locus_tag=b0403 NC_000913.3 RefSeq CDS 422518 424332 . + 0 ID=cds395;Parent=gene408;Dbxref=ASAP:ABE-0001402,UniProtKB/Swiss-Prot:P21517,Genbank:NP_414937.2,EcoGene:EG10565,GeneID:949131;Name=NP_414937.2;gbkey=CDS;gene=malZ;product=maltodextrin glucosidase;protein_id=NP_414937.2;transl_table=11 NC_000913.3 RefSeq gene 424337 424918 . - . ID=gene409;Dbxref=EcoGene:EG11095,GeneID:949132;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;gene_synonym=acpD,ECK0398,JW0394,yajB;locus_tag=b0404 NC_000913.3 RefSeq CDS 424337 424918 . - 0 ID=cds396;Parent=gene409;Dbxref=ASAP:ABE-0001404,UniProtKB/Swiss-Prot:P21515,Genbank:NP_414938.1,EcoGene:EG11095,GeneID:949132;Name=NP_414938.1;Note=putative glycoprotein;gbkey=CDS;gene=acpH;product=acyl carrier protein (ACP) phosphodiesterase%3B ACP hydrolyase;protein_id=NP_414938.1;transl_table=11 NC_000913.3 RefSeq gene 425011 426081 . + . ID=gene410;Dbxref=EcoGene:EG10812,GeneID:944905;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;gene_synonym=ECK0399,JW0395;locus_tag=b0405 NC_000913.3 RefSeq CDS 425011 426081 . + 0 ID=cds397;Parent=gene410;Dbxref=ASAP:ABE-0001411,UniProtKB/Swiss-Prot:P0A7F9,Genbank:NP_414939.1,EcoGene:EG10812,GeneID:944905;Name=NP_414939.1;Note=synthesis of queuine in tRNA%3B probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=NP_414939.1;transl_table=11 NC_000913.3 RefSeq gene 426137 427264 . + . ID=gene411;Dbxref=EcoGene:EG10996,GeneID:949130;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;gene_synonym=ECK0400,JW0396,vacC;locus_tag=b0406 NC_000913.3 RefSeq CDS 426137 427264 . + 0 ID=cds398;Parent=gene411;Dbxref=ASAP:ABE-0001413,UniProtKB/Swiss-Prot:P0A847,Genbank:NP_414940.1,EcoGene:EG10996,GeneID:949130;Name=NP_414940.1;gbkey=CDS;gene=tgt;product=tRNA-guanine transglycosylase;protein_id=NP_414940.1;transl_table=11 NC_000913.3 RefSeq gene 427287 427619 . + . ID=gene412;Dbxref=EcoGene:EG11096,GeneID:945374;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;gene_synonym=ECK0401,JW0397;locus_tag=b0407 NC_000913.3 RefSeq CDS 427287 427619 . + 0 ID=cds399;Parent=gene412;Dbxref=ASAP:ABE-0001415,UniProtKB/Swiss-Prot:P0ADZ7,Genbank:NP_414941.1,EcoGene:EG11096,GeneID:945374;Name=NP_414941.1;gbkey=CDS;gene=yajC;product=SecYEG protein translocase auxillary subunit;protein_id=NP_414941.1;transl_table=11 NC_000913.3 RefSeq gene 427647 429494 . + . ID=gene413;Dbxref=EcoGene:EG10938,GeneID:949133;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;gene_synonym=ECK0402,JW0398;locus_tag=b0408 NC_000913.3 RefSeq CDS 427647 429494 . + 0 ID=cds400;Parent=gene413;Dbxref=ASAP:ABE-0001417,UniProtKB/Swiss-Prot:P0AG90,Genbank:NP_414942.1,EcoGene:EG10938,GeneID:949133;Name=NP_414942.1;Note=protein secretion%3B membrane protein%2C part of the channel;gbkey=CDS;gene=secD;product=SecYEG protein translocase auxillary subunit;protein_id=NP_414942.1;transl_table=11 NC_000913.3 RefSeq gene 429505 430476 . + . ID=gene414;Dbxref=EcoGene:EG10940,GeneID:949120;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;gene_synonym=ECK0403,JW0399;locus_tag=b0409 NC_000913.3 RefSeq CDS 429505 430476 . + 0 ID=cds401;Parent=gene414;Dbxref=ASAP:ABE-0001419,UniProtKB/Swiss-Prot:P0AG93,Genbank:NP_414943.1,EcoGene:EG10940,GeneID:949120;Name=NP_414943.1;Note=protein secretion%2C membrane protein;gbkey=CDS;gene=secF;product=SecYEG protein translocase auxillary subunit;protein_id=NP_414943.1;transl_table=11 NC_000913.3 RefSeq gene 430605 430952 . + . ID=gene415;Dbxref=EcoGene:EG11097,GeneID:945051;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;gene_synonym=ECK0404,JW0400;locus_tag=b0410 NC_000913.3 RefSeq CDS 430605 430952 . + 0 ID=cds402;Parent=gene415;Dbxref=ASAP:ABE-0001422,UniProtKB/Swiss-Prot:P0AAQ2,Genbank:NP_414944.1,EcoGene:EG11097,GeneID:945051;Name=NP_414944.1;gbkey=CDS;gene=yajD;product=HNH nuclease family protein;protein_id=NP_414944.1;transl_table=11 NC_000913.3 RefSeq repeat_region 430968 431065 . + . ID=id65;Note=REP37 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 431129 432013 . - . ID=gene416;Dbxref=EcoGene:EG11035,GeneID:946242;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;gene_synonym=ECK0405,JW0401,nupA,T6rec;locus_tag=b0411 NC_000913.3 RefSeq CDS 431129 432013 . - 0 ID=cds403;Parent=gene416;Dbxref=ASAP:ABE-0001425,UniProtKB/Swiss-Prot:P0A927,Genbank:NP_414945.1,EcoGene:EG11035,GeneID:946242;Name=NP_414945.1;Note=nucleoside channel%3B receptor of phage T6 and colicin K;gbkey=CDS;gene=tsx;product=nucleoside channel%2C receptor of phage T6 and colicin K;protein_id=NP_414945.1;transl_table=11 NC_000913.3 RefSeq gene 432312 432851 . - . ID=gene417;Dbxref=EcoGene:EG12874,GeneID:947233;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;gene_synonym=ECK0406,JW5056;locus_tag=b0412 NC_000913.3 RefSeq CDS 432312 432851 . - 0 ID=cds404;Parent=gene417;Dbxref=ASAP:ABE-0001433,UniProtKB/Swiss-Prot:P46122,Genbank:NP_414946.4,EcoGene:EG12874,GeneID:947233;Name=NP_414946.4;gbkey=CDS;gene=yajI;product=putative lipoprotein;protein_id=NP_414946.4;transl_table=11 NC_000913.3 RefSeq gene 433002 433451 . + . ID=gene418;Dbxref=EcoGene:EG11320,GeneID:947437;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;gene_synonym=ECK0407,JW0403,ribX,ybaD;locus_tag=b0413 NC_000913.3 RefSeq CDS 433002 433451 . + 0 ID=cds405;Parent=gene418;Dbxref=ASAP:ABE-0001437,UniProtKB/Swiss-Prot:P0A8D0,Genbank:NP_414947.1,EcoGene:EG11320,GeneID:947437;Name=NP_414947.1;gbkey=CDS;gene=nrdR;product=Nrd regulon repressor;protein_id=NP_414947.1;transl_table=11 NC_000913.3 RefSeq gene 433455 434558 . + . ID=gene419;Dbxref=EcoGene:EG11321,GeneID:945620;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;gene_synonym=ECK0408,JW0404,ribG,ybaE;locus_tag=b0414 NC_000913.3 RefSeq CDS 433455 434558 . + 0 ID=cds406;Parent=gene419;Dbxref=ASAP:ABE-0001441,UniProtKB/Swiss-Prot:P25539,Genbank:NP_414948.1,EcoGene:EG11321,GeneID:945620;Name=NP_414948.1;gbkey=CDS;gene=ribD;product=fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase;protein_id=NP_414948.1;transl_table=11 NC_000913.3 RefSeq gene 434647 435117 . + . ID=gene420;Dbxref=EcoGene:EG11322,GeneID:946453;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;gene_synonym=ECK0409,JW0405,ribH,ybaF;locus_tag=b0415 NC_000913.3 RefSeq CDS 434647 435117 . + 0 ID=cds407;Parent=gene420;Dbxref=ASAP:ABE-0001444,UniProtKB/Swiss-Prot:P61714,Genbank:NP_414949.1,EcoGene:EG11322,GeneID:946453;Name=NP_414949.1;Note=riboflavin synthase%2C beta chain;gbkey=CDS;gene=ribE;product=riboflavin synthase beta chain;protein_id=NP_414949.1;transl_table=11 NC_000913.3 RefSeq gene 435137 435556 . + . ID=gene421;Dbxref=EcoGene:EG10666,GeneID:945054;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;gene_synonym=ECK0410,groNB,JW0406,ssaD,ssyB;locus_tag=b0416 NC_000913.3 RefSeq CDS 435137 435556 . + 0 ID=cds408;Parent=gene421;Dbxref=ASAP:ABE-0001447,UniProtKB/Swiss-Prot:P0A780,Genbank:NP_414950.1,EcoGene:EG10666,GeneID:945054;Name=NP_414950.1;Note=transcription termination%3B L factor;gbkey=CDS;gene=nusB;product=transcription antitermination protein;protein_id=NP_414950.1;transl_table=11 NC_000913.3 RefSeq gene 435634 436611 . + . ID=gene422;Dbxref=EcoGene:EG20227,GeneID:947387;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;gene_synonym=ECK0411,JW0407;locus_tag=b0417 NC_000913.3 RefSeq CDS 435634 436611 . + 0 ID=cds409;Parent=gene422;Dbxref=ASAP:ABE-0001452,UniProtKB/Swiss-Prot:P0AGG0,Genbank:NP_414951.1,EcoGene:EG20227,GeneID:947387;Name=NP_414951.1;gbkey=CDS;gene=thiL;product=thiamine monophosphate kinase;protein_id=NP_414951.1;transl_table=11 NC_000913.3 RefSeq gene 436589 437107 . + . ID=gene423;Dbxref=EcoGene:EG10704,GeneID:947542;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;gene_synonym=ECK0412,JW0408,yajN;locus_tag=b0418 NC_000913.3 RefSeq CDS 436589 437107 . + 0 ID=cds410;Parent=gene423;Dbxref=ASAP:ABE-0001454,UniProtKB/Swiss-Prot:P18200,Genbank:NP_414952.1,EcoGene:EG10704,GeneID:947542;Name=NP_414952.1;Note=phosphatidylglycerophosphatase;gbkey=CDS;gene=pgpA;product=phosphatidylglycerophosphatase A;protein_id=NP_414952.1;transl_table=11 NC_000913.3 RefSeq repeat_region 437120 437156 . + . ID=id66;Note=REP38 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 437161 438135 . - . ID=gene424;Dbxref=EcoGene:EG13611,GeneID:946903;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;gene_synonym=ECK0413,JW0409;locus_tag=b0419 NC_000913.3 RefSeq CDS 437161 438135 . - 0 ID=cds411;Parent=gene424;Dbxref=ASAP:ABE-0001457,UniProtKB/Swiss-Prot:P77735,Genbank:NP_414953.2,EcoGene:EG13611,GeneID:946903;Name=NP_414953.2;Note=putative NAD(P)H-dependent xylose reductase;gbkey=CDS;gene=yajO;product=2-carboxybenzaldehyde reductase;protein_id=NP_414953.2;transl_table=11 NC_000913.3 RefSeq gene 438315 440177 . - . ID=gene425;Dbxref=EcoGene:EG13612,GeneID:945060;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;gene_synonym=ECK0414,JW0410,yajP;locus_tag=b0420 NC_000913.3 RefSeq CDS 438315 440177 . - 0 ID=cds412;Parent=gene425;Dbxref=ASAP:ABE-0001461,UniProtKB/Swiss-Prot:P77488,Genbank:NP_414954.1,EcoGene:EG13612,GeneID:945060;Name=NP_414954.1;Note=1-deoxyxylulose-5-phosphate synthase%3B flavoprotein;gbkey=CDS;gene=dxs;product=1-deoxyxylulose-5-phosphate synthase%2C thiamine triphosphate-binding%2C FAD-requiring;protein_id=NP_414954.1;transl_table=11 NC_000913.3 RefSeq gene 440202 441101 . - . ID=gene426;Dbxref=EcoGene:EG10508,GeneID:945064;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;gene_synonym=ECK0415,JW0411;locus_tag=b0421 NC_000913.3 RefSeq CDS 440202 441101 . - 0 ID=cds413;Parent=gene426;Dbxref=ASAP:ABE-0001463,UniProtKB/Swiss-Prot:P22939,Genbank:NP_414955.1,EcoGene:EG10508,GeneID:945064;Name=NP_414955.1;gbkey=CDS;gene=ispA;product=geranyltranstransferase;protein_id=NP_414955.1;transl_table=11 NC_000913.3 RefSeq gene 441101 441343 . - . ID=gene427;Dbxref=EcoGene:EG11098,GeneID:945069;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;gene_synonym=ECK0416,JW0412,yajE;locus_tag=b0422 NC_000913.3 RefSeq CDS 441101 441343 . - 0 ID=cds414;Parent=gene427;Dbxref=ASAP:ABE-0001466,UniProtKB/Swiss-Prot:P0A8G9,Genbank:NP_414956.1,EcoGene:EG11098,GeneID:945069;Name=NP_414956.1;Note=exonuclease VII%2C small subunit;gbkey=CDS;gene=xseB;product=exonuclease VII small subunit;protein_id=NP_414956.1;transl_table=11 NC_000913.3 RefSeq gene 441549 442997 . + . ID=gene428;Dbxref=EcoGene:EG13273,GeneID:945067;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;gene_synonym=ECK0417,JW0413,nuvA,yajJ,yajK;locus_tag=b0423 NC_000913.3 RefSeq CDS 441549 442997 . + 0 ID=cds415;Parent=gene428;Dbxref=ASAP:ABE-0001470,UniProtKB/Swiss-Prot:P77718,Genbank:NP_414957.1,EcoGene:EG13273,GeneID:945067;Name=NP_414957.1;gbkey=CDS;gene=thiI;product=tRNA s(4)U8 sulfurtransferase;protein_id=NP_414957.1;transl_table=11 NC_000913.3 RefSeq repeat_region 443018 443049 . + . ID=id67;Note=REP39 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 443051 443641 . - . ID=gene429;Dbxref=EcoGene:EG13272,GeneID:945066;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;gene_synonym=ECK0418,JW5057,thiJ;locus_tag=b0424 NC_000913.3 RefSeq CDS 443051 443641 . - 0 ID=cds416;Parent=gene429;Dbxref=ASAP:ABE-0001472,UniProtKB/Swiss-Prot:Q46948,Genbank:NP_414958.4,EcoGene:EG13272,GeneID:945066;Name=NP_414958.4;gbkey=CDS;gene=yajL;product=oxidative-stress-resistance chaperone;protein_id=NP_414958.4;transl_table=11 NC_000913.3 RefSeq gene 443604 444515 . - . ID=gene430;Dbxref=EcoGene:EG13271,GeneID:945065;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;gene_synonym=apbA,ECK0419,JW0415;locus_tag=b0425 NC_000913.3 RefSeq CDS 443604 444515 . - 0 ID=cds417;Parent=gene430;Dbxref=ASAP:ABE-0001474,UniProtKB/Swiss-Prot:P0A9J4,Genbank:NP_414959.1,EcoGene:EG13271,GeneID:945065;Name=NP_414959.1;Note=2-dehydropantoate 2-reductase;gbkey=CDS;gene=panE;product=2-dehydropantoate reductase%2C NADPH-specific;protein_id=NP_414959.1;transl_table=11 NC_000913.3 RefSeq gene 444683 445174 . + . ID=gene431;Dbxref=EcoGene:EG13613,GeneID:945063;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;gene_synonym=ECK0420,JW5058;locus_tag=b0426 NC_000913.3 RefSeq CDS 444683 445174 . + 0 ID=cds418;Parent=gene431;Dbxref=ASAP:ABE-0001478,UniProtKB/Swiss-Prot:P0A8E7,Genbank:NP_414960.2,EcoGene:EG13613,GeneID:945063;Name=NP_414960.2;gbkey=CDS;gene=yajQ;product=phage Phi6 host factor%2C ATP/GTP binding protein;protein_id=NP_414960.2;transl_table=11 NC_000913.3 RefSeq repeat_region 445200 445286 . + . ID=id68;Note=REP40 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 445302 446666 . - . ID=gene432;Dbxref=EcoGene:EG13614,GeneID:945058;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;gene_synonym=ECK0421,JW5059;locus_tag=b0427 NC_000913.3 RefSeq CDS 445302 446666 . - 0 ID=cds419;Parent=gene432;Dbxref=ASAP:ABE-0001481,UniProtKB/Swiss-Prot:P77726,Genbank:NP_414961.4,EcoGene:EG13614,GeneID:945058;Name=NP_414961.4;Note=putative transport protein;gbkey=CDS;gene=yajR;product=putative transporter;protein_id=NP_414961.4;transl_table=11 NC_000913.3 RefSeq gene 446815 447705 . - . ID=gene433;Dbxref=EcoGene:EG10182,GeneID:945073;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;gene_synonym=ECK0422,JW0418;locus_tag=b0428 NC_000913.3 RefSeq CDS 446815 447705 . - 0 ID=cds420;Parent=gene433;Dbxref=ASAP:ABE-0001484,UniProtKB/Swiss-Prot:P0AEA5,Genbank:NP_414962.1,EcoGene:EG10182,GeneID:945073;Name=NP_414962.1;Note=protoheme IX farnesyltransferase (haeme O biosynthesis);gbkey=CDS;gene=cyoE;product=protoheme IX farnesyltransferase;protein_id=NP_414962.1;transl_table=11 NC_000913.3 RefSeq gene 447717 448046 . - . ID=gene434;Dbxref=EcoGene:EG10181,GeneID:944918;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;gene_synonym=ECK0423,JW0419;locus_tag=b0429 NC_000913.3 RefSeq CDS 447717 448046 . - 0 ID=cds421;Parent=gene434;Dbxref=ASAP:ABE-0001487,UniProtKB/Swiss-Prot:P0ABJ6,Genbank:NP_414963.1,EcoGene:EG10181,GeneID:944918;Name=NP_414963.1;gbkey=CDS;gene=cyoD;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=NP_414963.1;transl_table=11 NC_000913.3 RefSeq gene 448046 448660 . - . ID=gene435;Dbxref=EcoGene:EG10180,GeneID:946897;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;gene_synonym=ECK0424,JW0420;locus_tag=b0430 NC_000913.3 RefSeq CDS 448046 448660 . - 0 ID=cds422;Parent=gene435;Dbxref=ASAP:ABE-0001491,UniProtKB/Swiss-Prot:P0ABJ3,Genbank:NP_414964.1,EcoGene:EG10180,GeneID:946897;Name=NP_414964.1;gbkey=CDS;gene=cyoC;product=cytochrome o ubiquinol oxidase subunit III;protein_id=NP_414964.1;transl_table=11 NC_000913.3 RefSeq gene 448650 450641 . - . ID=gene436;Dbxref=EcoGene:EG10179,GeneID:945615;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;gene_synonym=ECK0425,JW0421;locus_tag=b0431 NC_000913.3 RefSeq CDS 448650 450641 . - 0 ID=cds423;Parent=gene436;Dbxref=ASAP:ABE-0001493,UniProtKB/Swiss-Prot:P0ABI8,Genbank:NP_414965.1,EcoGene:EG10179,GeneID:945615;Name=NP_414965.1;gbkey=CDS;gene=cyoB;product=cytochrome o ubiquinol oxidase subunit I;protein_id=NP_414965.1;transl_table=11 NC_000913.3 RefSeq gene 450663 451610 . - . ID=gene437;Dbxref=EcoGene:EG10178,GeneID:945080;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;gene_synonym=ECK0426,JW0422;locus_tag=b0432 NC_000913.3 RefSeq CDS 450663 451610 . - 0 ID=cds424;Parent=gene437;Dbxref=ASAP:ABE-0001495,UniProtKB/Swiss-Prot:P0ABJ1,Genbank:NP_414966.1,EcoGene:EG10178,GeneID:945080;Name=NP_414966.1;gbkey=CDS;gene=cyoA;product=cytochrome o ubiquinol oxidase subunit II;protein_id=NP_414966.1;transl_table=11 NC_000913.3 RefSeq gene 452070 453545 . - . ID=gene438;Dbxref=EcoGene:EG12183,GeneID:946438;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;gene_synonym=ECK0427,JW0423;locus_tag=b0433 NC_000913.3 RefSeq CDS 452070 453545 . - 0 ID=cds425;Parent=gene438;Dbxref=ASAP:ABE-0001501,UniProtKB/Swiss-Prot:P0AE16,Genbank:NP_414967.1,EcoGene:EG12183,GeneID:946438;Name=NP_414967.1;Note=regulates beta-lactamase synthesis;gbkey=CDS;gene=ampG;product=muropeptide transporter;protein_id=NP_414967.1;transl_table=11 NC_000913.3 RefSeq gene 453589 454167 . - . ID=gene439;Dbxref=EcoGene:EG12182,GeneID:945521;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;gene_synonym=ECK0428,JW0424;locus_tag=b0434 NC_000913.3 RefSeq CDS 453589 454167 . - 0 ID=cds426;Parent=gene439;Dbxref=ASAP:ABE-0001504,UniProtKB/Swiss-Prot:P0ADA5,Genbank:NP_414968.4,EcoGene:EG12182,GeneID:945521;Name=NP_414968.4;Note=putative polymerase/proteinase;gbkey=CDS;gene=yajG;product=putative lipoprotein;protein_id=NP_414968.4;transl_table=11 NC_000913.3 RefSeq gene 454472 454789 . + . ID=gene440;Dbxref=EcoGene:EG10125,GeneID:947043;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;gene_synonym=ECK0429,JW5060;locus_tag=b0435 NC_000913.3 RefSeq CDS 454472 454789 . + 0 ID=cds427;Parent=gene440;Dbxref=ASAP:ABE-0001508,UniProtKB/Swiss-Prot:P0ABE2,Genbank:NP_414969.4,EcoGene:EG10125,GeneID:947043;Name=NP_414969.4;Note=possible regulator of murein genes;gbkey=CDS;gene=bolA;product=stationary-phase morphogene%2C transcriptional repressor for mreB%3B also regulator for dacA%2C dacC%2C and ampC;protein_id=NP_414969.4;transl_table=11 NC_000913.3 RefSeq gene 455133 456431 . + . ID=gene441;Dbxref=EcoGene:EG11003,GeneID:945081;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;gene_synonym=ECK0430,JW0426;locus_tag=b0436 NC_000913.3 RefSeq CDS 455133 456431 . + 0 ID=cds428;Parent=gene441;Dbxref=ASAP:ABE-0001511,UniProtKB/Swiss-Prot:P0A850,Genbank:NP_414970.1,EcoGene:EG11003,GeneID:945081;Name=NP_414970.1;Note=trigger factor%3B a molecular chaperone involved in cell division;gbkey=CDS;gene=tig;product=peptidyl-prolyl cis/trans isomerase (trigger factor);protein_id=NP_414970.1;transl_table=11 NC_000913.3 RefSeq gene 456677 457300 . + . ID=gene442;Dbxref=EcoGene:EG10158,GeneID:945082;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;gene_synonym=ECK0431,JW0427,lopP,wseA;locus_tag=b0437 NC_000913.3 RefSeq CDS 456677 457300 . + 0 ID=cds429;Parent=gene442;Dbxref=ASAP:ABE-0001515,UniProtKB/Swiss-Prot:P0A6G7,Genbank:NP_414971.1,EcoGene:EG10158,GeneID:945082;Name=NP_414971.1;Note=ATP-dependent proteolytic subunit of clpA-clpP serine protease%2C heat shock protein F21.5;gbkey=CDS;gene=clpP;product=proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases;protein_id=NP_414971.1;transl_table=11 NC_000913.3 RefSeq gene 457426 458700 . + . ID=gene443;Dbxref=EcoGene:EG10159,GeneID:945083;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;gene_synonym=ECK0432,JW0428,lopC;locus_tag=b0438 NC_000913.3 RefSeq CDS 457426 458700 . + 0 ID=cds430;Parent=gene443;Dbxref=ASAP:ABE-0001517,UniProtKB/Swiss-Prot:P0A6H1,Genbank:NP_414972.1,EcoGene:EG10159,GeneID:945083;Name=NP_414972.1;Note=ATP-dependent specificity component of clpP serine protease%2C chaperone;gbkey=CDS;gene=clpX;product=ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease;protein_id=NP_414972.1;transl_table=11 NC_000913.3 RefSeq gene 458888 461242 . + . ID=gene444;Dbxref=EcoGene:EG10542,GeneID:945085;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;gene_synonym=capR,deg,dir,ECK0433,JW0429,lonA,lopA,muc;locus_tag=b0439 NC_000913.3 RefSeq CDS 458888 461242 . + 0 ID=cds431;Parent=gene444;Dbxref=ASAP:ABE-0001521,UniProtKB/Swiss-Prot:P0A9M0,Genbank:NP_414973.1,EcoGene:EG10542,GeneID:945085;Name=NP_414973.1;Note=DNA-binding%2C ATP-dependent protease La%3B heat shock K-protein;gbkey=CDS;gene=lon;product=DNA-binding ATP-dependent protease La;protein_id=NP_414973.1;transl_table=11 NC_000913.3 RefSeq gene 461451 461723 . + . ID=gene445;Dbxref=EcoGene:EG10467,GeneID:949095;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;gene_synonym=dpeA,ECK0434,hopD,JW0430;locus_tag=b0440 NC_000913.3 RefSeq CDS 461451 461723 . + 0 ID=cds432;Parent=gene445;Dbxref=ASAP:ABE-0001527,UniProtKB/Swiss-Prot:P0ACF4,Genbank:NP_414974.1,EcoGene:EG10467,GeneID:949095;Name=NP_414974.1;Note=DNA-binding protein HU-beta%2C NS1 (HU-1);gbkey=CDS;gene=hupB;product=HU%2C DNA-binding transcriptional regulator%2C beta subunit;protein_id=NP_414974.1;transl_table=11 NC_000913.3 RefSeq gene 461915 463786 . + . ID=gene446;Dbxref=EcoGene:EG13249,GeneID:946056;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;gene_synonym=ECK0435,JW0431,ybaU;locus_tag=b0441 NC_000913.3 RefSeq CDS 461915 463786 . + 0 ID=cds433;Parent=gene446;Dbxref=ASAP:ABE-0001531,UniProtKB/Swiss-Prot:P0ADY1,Genbank:NP_414975.1,EcoGene:EG13249,GeneID:946056;Name=NP_414975.1;gbkey=CDS;gene=ppiD;product=periplasmic folding chaperone%2C has an inactive PPIase domain;protein_id=NP_414975.1;transl_table=11 NC_000913.3 RefSeq gene 463937 464308 . + . ID=gene447;Dbxref=EcoGene:EG13250,GeneID:945884;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;gene_synonym=ECK0436,JW0432;locus_tag=b0442 NC_000913.3 RefSeq CDS 463937 464308 . + 0 ID=cds434;Parent=gene447;Dbxref=ASAP:ABE-0001534,UniProtKB/Swiss-Prot:P0AAR8,Genbank:NP_414976.1,EcoGene:EG13250,GeneID:945884;Name=NP_414976.1;gbkey=CDS;gene=ybaV;product=putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein;protein_id=NP_414976.1;transl_table=11 NC_000913.3 RefSeq gene 464402 464800 . + . ID=gene448;Dbxref=EcoGene:EG13251,GeneID:945812;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;gene_synonym=ECK0437,JW0433,tesC,ybaW;locus_tag=b0443 NC_000913.3 RefSeq CDS 464402 464800 . + 0 ID=cds435;Parent=gene448;Dbxref=ASAP:ABE-0001537,UniProtKB/Swiss-Prot:P77712,Genbank:NP_414977.1,EcoGene:EG13251,GeneID:945812;Name=NP_414977.1;gbkey=CDS;gene=fadM;product=long-chain acyl-CoA thioesterase III;protein_id=NP_414977.1;transl_table=11 NC_000913.3 RefSeq repeat_region 464813 464837 . + . ID=id69;Note=REP41 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 464852 465547 . - . ID=gene449;Dbxref=EcoGene:EG13252,GeneID:947034;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;gene_synonym=ECK0438,JW0434,ybaX;locus_tag=b0444 NC_000913.3 RefSeq CDS 464852 465547 . - 0 ID=cds436;Parent=gene449;Dbxref=ASAP:ABE-0001539,UniProtKB/Swiss-Prot:P77756,Genbank:NP_414978.1,EcoGene:EG13252,GeneID:947034;Name=NP_414978.1;gbkey=CDS;gene=queC;product=7-cyano-7-deazaguanine (preQ0) synthase%3B queuosine biosynthesis;protein_id=NP_414978.1;transl_table=11 NC_000913.3 RefSeq gene 465612 467312 . - . ID=gene450;Dbxref=EcoGene:EG13217,GeneID:949093;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;gene_synonym=ECK0439,JW0435;locus_tag=b0445 NC_000913.3 RefSeq CDS 465612 467312 . - 0 ID=cds437;Parent=gene450;Dbxref=ASAP:ABE-0001542,UniProtKB/Swiss-Prot:P46890,Genbank:NP_414979.1,EcoGene:EG13217,GeneID:949093;Name=NP_414979.1;gbkey=CDS;gene=ybaE;product=putative ABC transporter periplasmic binding protein;protein_id=NP_414979.1;transl_table=11 NC_000913.3 RefSeq gene 467412 468230 . + . ID=gene451;Dbxref=EcoGene:EG13216,GeneID:945089;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;gene_synonym=ECK0440,JW0436;locus_tag=b0446 NC_000913.3 RefSeq CDS 467412 468230 . + 0 ID=cds438;Parent=gene451;Dbxref=ASAP:ABE-0001548,UniProtKB/Swiss-Prot:P46891,Genbank:NP_414980.2,EcoGene:EG13216,GeneID:945089;Name=NP_414980.2;gbkey=CDS;gene=cof;product=thiamine pyrimidine pyrophosphate hydrolase%3B HMP-PP phosphatase;protein_id=NP_414980.2;transl_table=11 NC_000913.3 RefSeq gene 468383 468841 . + . ID=gene452;Dbxref=EcoGene:EG13218,GeneID:945091;Name=ybaO;gbkey=Gene;gene=ybaO;gene_biotype=protein_coding;gene_synonym=ECK0441,grp?,JW0437;locus_tag=b0447 NC_000913.3 RefSeq CDS 468383 468841 . + 0 ID=cds439;Parent=gene452;Dbxref=ASAP:ABE-0001553,UniProtKB/Swiss-Prot:P0ACJ5,Genbank:NP_414981.4,EcoGene:EG13218,GeneID:945091;Name=NP_414981.4;Note=putative LRP-like transcriptional regulator;gbkey=CDS;gene=ybaO;product=putative DNA-binding transcriptional regulator;protein_id=NP_414981.4;transl_table=11 NC_000913.3 RefSeq gene 468871 470643 . + . ID=gene453;Dbxref=EcoGene:EG11622,GeneID:945092;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;gene_synonym=ECK0442,JW0438,mdl;locus_tag=b0448 NC_000913.3 RefSeq CDS 468871 470643 . + 0 ID=cds440;Parent=gene453;Dbxref=ASAP:ABE-0001555,UniProtKB/Swiss-Prot:P77265,Genbank:NP_414982.1,EcoGene:EG11622,GeneID:945092;Name=NP_414982.1;gbkey=CDS;gene=mdlA;product=putative multidrug ABC transporter ATPase;protein_id=NP_414982.1;transl_table=11 NC_000913.3 RefSeq gene 470636 472417 . + . ID=gene454;Dbxref=EcoGene:EG14374,GeneID:945088;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;gene_synonym=ECK0443,JW5061,mdl;locus_tag=b0449 NC_000913.3 RefSeq CDS 470636 472417 . + 0 ID=cds441;Parent=gene454;Dbxref=ASAP:ABE-0001557,UniProtKB/Swiss-Prot:P0AAG5,Genbank:NP_414983.1,EcoGene:EG14374,GeneID:945088;Name=NP_414983.1;gbkey=CDS;gene=mdlB;product=putative multidrug ABC transporter ATPase;protein_id=NP_414983.1;transl_table=11 NC_000913.3 RefSeq gene 472598 472936 . + . ID=gene455;Dbxref=EcoGene:EG12191,GeneID:945087;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;gene_synonym=ECK0444,JW0440,ybaI;locus_tag=b0450 NC_000913.3 RefSeq CDS 472598 472936 . + 0 ID=cds442;Parent=gene455;Dbxref=ASAP:ABE-0001562,UniProtKB/Swiss-Prot:P0AC55,Genbank:NP_414984.1,EcoGene:EG12191,GeneID:945087;Name=NP_414984.1;Note=nitrogen regulatory protein P-II 2;gbkey=CDS;gene=glnK;product=nitrogen assimilation regulatory protein for GlnL%2C GlnE%2C and AmtB;protein_id=NP_414984.1;transl_table=11 NC_000913.3 RefSeq gene 472966 474252 . + . ID=gene456;Dbxref=EcoGene:EG11821,GeneID:945084;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;gene_synonym=ECK0445,JW0441,ybaG;locus_tag=b0451 NC_000913.3 RefSeq CDS 472966 474252 . + 0 ID=cds443;Parent=gene456;Dbxref=ASAP:ABE-0001564,UniProtKB/Swiss-Prot:P69681,Genbank:NP_414985.1,EcoGene:EG11821,GeneID:945084;Name=NP_414985.1;Note=probable ammonium transporter;gbkey=CDS;gene=amtB;product=ammonium transporter;protein_id=NP_414985.1;transl_table=11 NC_000913.3 RefSeq repeat_region 474271 474293 . + . ID=id70;Note=REP42 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 474301 475161 . - . ID=gene457;Dbxref=EcoGene:EG10995,GeneID:945074;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;gene_synonym=ECK0446,JW0442;locus_tag=b0452 NC_000913.3 RefSeq CDS 474301 475161 . - 0 ID=cds444;Parent=gene457;Dbxref=ASAP:ABE-0001566,UniProtKB/Swiss-Prot:P0AGG2,Genbank:NP_414986.1,EcoGene:EG10995,GeneID:945074;Name=NP_414986.1;gbkey=CDS;gene=tesB;product=acyl-CoA thioesterase 2;protein_id=NP_414986.1;transl_table=11 NC_000913.3 RefSeq gene 475379 475951 . + . ID=gene458;Dbxref=EcoGene:EG13253,GeneID:945070;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;gene_synonym=ECK0447,JW0443;locus_tag=b0453 NC_000913.3 RefSeq CDS 475379 475951 . + 0 ID=cds445;Parent=gene458;Dbxref=ASAP:ABE-0001574,UniProtKB/Swiss-Prot:P77717,Genbank:NP_414987.3,EcoGene:EG13253,GeneID:945070;Name=NP_414987.3;Note=glycoprotein/polysaccharide metabolism;gbkey=CDS;gene=ybaY;product=outer membrane lipoprotein;protein_id=NP_414987.3;transl_table=11 NC_000913.3 RefSeq gene 475982 476371 . - . ID=gene459;Dbxref=EcoGene:EG13254,GeneID:945094;Name=ybaZ;gbkey=Gene;gene=ybaZ;gene_biotype=protein_coding;gene_synonym=ECK0448,JW0444;locus_tag=b0454 NC_000913.3 RefSeq CDS 475982 476371 . - 0 ID=cds446;Parent=gene459;Dbxref=ASAP:ABE-0001576,UniProtKB/Swiss-Prot:P0AFP2,Genbank:NP_414988.1,EcoGene:EG13254,GeneID:945094;Name=NP_414988.1;gbkey=CDS;gene=ybaZ;product=excision repair protein%2C alkyltransferase-like protein ATL;protein_id=NP_414988.1;transl_table=11 NC_000913.3 RefSeq gene 476448 476561 . + . ID=gene460;Dbxref=EcoGene:EG30027,GeneID:944909;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;gene_synonym=ECK0449,JWR0009;locus_tag=b0455 NC_000913.3 RefSeq ncRNA 476448 476561 . + . ID=rna13;Parent=gene460;Dbxref=ASAP:ABE-0001579,EcoGene:EG30027,GeneID:944909;Note=4.5S RNA%3B component of ribonucleoprotein particle%3B works with the Ffh protein~adjusted endpoints to reflect the mature 4.5S RNA (114 nt);gbkey=ncRNA;gene=ffs;ncrna_class=SRP_RNA;product=4.5S sRNA component of Signal Recognition Particle (SRP) NC_000913.3 RefSeq exon 476448 476561 . + . ID=id71;Parent=rna13;Dbxref=ASAP:ABE-0001579,EcoGene:EG30027,GeneID:944909;Note=4.5S RNA%3B component of ribonucleoprotein particle%3B works with the Ffh protein~adjusted endpoints to reflect the mature 4.5S RNA (114 nt);gbkey=ncRNA;gene=ffs;ncrna_class=SRP_RNA;product=4.5S sRNA component of Signal Recognition Particle (SRP) NC_000913.3 RefSeq gene 476672 477025 . + . ID=gene461;Dbxref=EcoGene:EG11099,GeneID:948863;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;gene_synonym=ECK0450,JW0445;locus_tag=b0456 NC_000913.3 RefSeq CDS 476672 477025 . + 0 ID=cds447;Parent=gene461;Dbxref=ASAP:ABE-0001582,UniProtKB/Swiss-Prot:P0AAQ6,Genbank:NP_414989.1,EcoGene:EG11099,GeneID:948863;Name=NP_414989.1;gbkey=CDS;gene=ybaA;product=DUF1428 family protein;protein_id=NP_414989.1;transl_table=11 NC_000913.3 RefSeq gene 477067 478617 . - . ID=gene462;Dbxref=EcoGene:EG14237,GeneID:948951;Name=ylaB;gbkey=Gene;gene=ylaB;gene_biotype=protein_coding;gene_synonym=ECK0451,JW5062;locus_tag=b0457 NC_000913.3 RefSeq CDS 477067 478617 . - 0 ID=cds448;Parent=gene462;Dbxref=ASAP:ABE-0001584,UniProtKB/Swiss-Prot:P77473,Genbank:NP_414990.2,EcoGene:EG14237,GeneID:948951;Name=NP_414990.2;gbkey=CDS;gene=ylaB;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=NP_414990.2;transl_table=11 NC_000913.3 RefSeq gene 478781 479251 . - . ID=gene463;Dbxref=EcoGene:EG14238,GeneID:948876;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;gene_synonym=ECK0452,JW5063;locus_tag=b0458 NC_000913.3 RefSeq CDS 478781 479251 . - 0 ID=cds449;Parent=gene463;Dbxref=ASAP:ABE-0001587,UniProtKB/Swiss-Prot:P0AAS0,Genbank:NP_414991.4,EcoGene:EG14238,GeneID:948876;Name=NP_414991.4;gbkey=CDS;gene=ylaC;product=DUF1449 family inner membrane protein;protein_id=NP_414991.4;transl_table=11 NC_000913.3 RefSeq gene 479367 479918 . - . ID=gene464;Dbxref=EcoGene:EG14239,GeneID:945096;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;gene_synonym=ECK0453,JW0448,ylaD;locus_tag=b0459 NC_000913.3 RefSeq CDS 479367 479918 . - 0 ID=cds450;Parent=gene464;Dbxref=ASAP:ABE-0001591,UniProtKB/Swiss-Prot:P77791,Genbank:NP_414992.1,EcoGene:EG14239,GeneID:945096;Name=NP_414992.1;gbkey=CDS;gene=maa;product=maltose O-acetyltransferase;protein_id=NP_414992.1;transl_table=11 NC_000913.3 RefSeq gene 480090 480308 . - . ID=gene465;Dbxref=EcoGene:EG10439,GeneID:945098;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;gene_synonym=ECK0454,JW0449;locus_tag=b0460 NC_000913.3 RefSeq CDS 480090 480308 . - 0 ID=cds451;Parent=gene465;Dbxref=ASAP:ABE-0001594,UniProtKB/Swiss-Prot:P0ACE3,Genbank:NP_414993.1,EcoGene:EG10439,GeneID:945098;Name=NP_414993.1;Note=haemolysin expression modulating protein;gbkey=CDS;gene=hha;product=modulator of gene expression%2C with H-NS;protein_id=NP_414993.1;transl_table=11 NC_000913.3 RefSeq gene 480334 480708 . - . ID=gene466;Dbxref=EcoGene:EG12429,GeneID:945106;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;gene_synonym=ECK0455,JW0450,ybaJ;locus_tag=b0461 NC_000913.3 RefSeq CDS 480334 480708 . - 0 ID=cds452;Parent=gene466;Dbxref=ASAP:ABE-0001596,UniProtKB/Swiss-Prot:P0AAR0,Genbank:NP_414994.1,EcoGene:EG12429,GeneID:945106;Name=NP_414994.1;gbkey=CDS;gene=tomB;product=Hha toxicity attenuator%3B conjugation-related protein;protein_id=NP_414994.1;transl_table=11 NC_000913.3 RefSeq gene 481254 484403 . - . ID=gene467;Dbxref=EcoGene:EG11704,GeneID:945108;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;gene_synonym=acrE,ECK0456,JW0451;locus_tag=b0462 NC_000913.3 RefSeq CDS 481254 484403 . - 0 ID=cds453;Parent=gene467;Dbxref=ASAP:ABE-0001601,UniProtKB/Swiss-Prot:P31224,Genbank:NP_414995.1,EcoGene:EG11704,GeneID:945108;Name=NP_414995.1;Note=acridine efflux pump;gbkey=CDS;gene=acrB;product=multidrug efflux system protein;protein_id=NP_414995.1;transl_table=11 NC_000913.3 RefSeq gene 484426 485619 . - . ID=gene468;Dbxref=EcoGene:EG11703,GeneID:945112;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;gene_synonym=ECK0457,JW0452,lir,Mb,mbl,mtcA,nbsA,sipB;locus_tag=b0463 NC_000913.3 RefSeq CDS 484426 485619 . - 0 ID=cds454;Parent=gene468;Dbxref=ASAP:ABE-0001603,UniProtKB/Swiss-Prot:P0AE06,Genbank:NP_414996.1,EcoGene:EG11703,GeneID:945112;Name=NP_414996.1;Note=acridine efflux pump;gbkey=CDS;gene=acrA;product=multidrug efflux system;protein_id=NP_414996.1;transl_table=11 NC_000913.3 RefSeq gene 485761 486408 . + . ID=gene469;Dbxref=EcoGene:EG12116,GeneID:945516;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;gene_synonym=ECK0458,JW0453,ybaH;locus_tag=b0464 NC_000913.3 RefSeq CDS 485761 486408 . + 0 ID=cds455;Parent=gene469;Dbxref=ASAP:ABE-0001608,UniProtKB/Swiss-Prot:P0ACS9,Genbank:NP_414997.1,EcoGene:EG12116,GeneID:945516;Name=NP_414997.1;Note=acrAB operon repressor;gbkey=CDS;gene=acrR;product=transcriptional repressor;protein_id=NP_414997.1;transl_table=11 NC_000913.3 RefSeq gene 486536 489898 . + . ID=gene470;Dbxref=EcoGene:EG14240,GeneID:945132;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;gene_synonym=aefA,ECK0459,JW0454,kefA,pnuH;locus_tag=b0465 NC_000913.3 RefSeq CDS 486536 489898 . + 0 ID=cds456;Parent=gene470;Dbxref=ASAP:ABE-0001613,UniProtKB/Swiss-Prot:P77338,Genbank:NP_414998.1,EcoGene:EG14240,GeneID:945132;Name=NP_414998.1;Note=mechanosensitive channel protein;gbkey=CDS;gene=mscK;product=mechanosensitive channel protein%2C intermediate conductance%2C K+ regulated;protein_id=NP_414998.1;transl_table=11 NC_000913.3 RefSeq repeat_region 489959 490056 . + . ID=id72;Note=RIP43 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 490110 490271 . - . ID=gene471;Dbxref=EcoGene:EG12830,GeneID:945144;Name=ybaM;gbkey=Gene;gene=ybaM;gene_biotype=protein_coding;gene_synonym=ECK0460,JW0455;locus_tag=b0466 NC_000913.3 RefSeq CDS 490110 490271 . - 0 ID=cds457;Parent=gene471;Dbxref=ASAP:ABE-0001616,UniProtKB/Swiss-Prot:P45807,Genbank:NP_414999.1,EcoGene:EG12830,GeneID:945144;Name=NP_414999.1;gbkey=CDS;gene=ybaM;product=DUF2496 family protein;protein_id=NP_414999.1;transl_table=11 NC_000913.3 RefSeq gene 490285 490812 . - . ID=gene472;Dbxref=EcoGene:EG10765,GeneID:945071;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;gene_synonym=ECK0461,JW0456;locus_tag=b0467 NC_000913.3 RefSeq CDS 490285 490812 . - 0 ID=cds458;Parent=gene472;Dbxref=ASAP:ABE-0001619,UniProtKB/Swiss-Prot:P23862,Genbank:NP_415000.1,EcoGene:EG10765,GeneID:945071;Name=NP_415000.1;gbkey=CDS;gene=priC;product=primosomal replication protein N'';protein_id=NP_415000.1;transl_table=11 NC_000913.3 RefSeq gene 490882 491259 . + . ID=gene473;Dbxref=EcoGene:EG12843,GeneID:945558;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;gene_synonym=ECK0462,JW0457;locus_tag=b0468 NC_000913.3 RefSeq CDS 490882 491259 . + 0 ID=cds459;Parent=gene473;Dbxref=ASAP:ABE-0001625,UniProtKB/Swiss-Prot:P0AAR5,Genbank:NP_415001.1,EcoGene:EG12843,GeneID:945558;Name=NP_415001.1;Note=putative gene 58;gbkey=CDS;gene=ybaN;product=DUF454 family inner membrane protein;protein_id=NP_415001.1;transl_table=11 NC_000913.3 RefSeq gene 491412 491963 . + . ID=gene474;Dbxref=EcoGene:EG10051,GeneID:945113;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;gene_synonym=ECK0463,JW0458;locus_tag=b0469 NC_000913.3 RefSeq CDS 491412 491963 . + 0 ID=cds460;Parent=gene474;Dbxref=ASAP:ABE-0001628,UniProtKB/Swiss-Prot:P69503,Genbank:NP_415002.1,EcoGene:EG10051,GeneID:945113;Name=NP_415002.1;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=NP_415002.1;transl_table=11 NC_000913.3 RefSeq gene 492092 494023 . + . ID=gene475;Dbxref=EcoGene:EG10245,GeneID:945105;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;gene_synonym=dnaZ,ECK0464,JW0459;locus_tag=b0470 NC_000913.3 RefSeq CDS 492092 494023 . + 0 ID=cds461;Parent=gene475;Dbxref=ASAP:ABE-0001633,UniProtKB/Swiss-Prot:P06710,Genbank:NP_415003.1,EcoGene:EG10245,GeneID:945105;Name=NP_415003.1;Note=DNA polymerase III%2C tau and gamma subunits%3B DNA elongation factor III;gbkey=CDS;gene=dnaX;product=DNA polymerase III/DNA elongation factor III%2C tau and gamma subunits;protein_id=NP_415003.1;transl_table=11 NC_000913.3 RefSeq gene 494076 494405 . + . ID=gene476;Dbxref=EcoGene:EG11100,GeneID:945104;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;gene_synonym=ECK0465,efbC,JW0460;locus_tag=b0471 NC_000913.3 RefSeq CDS 494076 494405 . + 0 ID=cds462;Parent=gene476;Dbxref=ASAP:ABE-0001636,UniProtKB/Swiss-Prot:P0A8B5,Genbank:NP_415004.1,EcoGene:EG11100,GeneID:945104;Name=NP_415004.1;gbkey=CDS;gene=ybaB;product=DNA-binding protein%2C putative nucleoid-associated protein;protein_id=NP_415004.1;transl_table=11 NC_000913.3 RefSeq gene 494405 495010 . + . ID=gene477;Dbxref=EcoGene:EG10834,GeneID:945100;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;gene_synonym=ECK0466,JW0461;locus_tag=b0472 NC_000913.3 RefSeq CDS 494405 495010 . + 0 ID=cds463;Parent=gene477;Dbxref=ASAP:ABE-0001638,UniProtKB/Swiss-Prot:P0A7H6,Genbank:NP_415005.1,EcoGene:EG10834,GeneID:945100;Name=NP_415005.1;Note=recombination and repair;gbkey=CDS;gene=recR;product=gap repair protein;protein_id=NP_415005.1;transl_table=11 NC_000913.3 RefSeq gene 495120 496994 . + . ID=gene478;Dbxref=EcoGene:EG10461,GeneID:945099;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;gene_synonym=ECK0467,JW0462;locus_tag=b0473 NC_000913.3 RefSeq CDS 495120 496994 . + 0 ID=cds464;Parent=gene478;Dbxref=ASAP:ABE-0001642,UniProtKB/Swiss-Prot:P0A6Z3,Genbank:NP_415006.1,EcoGene:EG10461,GeneID:945099;Name=NP_415006.1;Note=chaperone Hsp90%2C heat shock protein C 62.5;gbkey=CDS;gene=htpG;product=protein refolding molecular co-chaperone Hsp90%2C Hsp70-dependent%3B heat-shock protein%3B ATPase;protein_id=NP_415006.1;transl_table=11 NC_000913.3 RefSeq repeat_region 497001 497026 . + . ID=id73;Note=REP44 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 497175 497819 . + . ID=gene479;Dbxref=EcoGene:EG10032,GeneID:945097;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;gene_synonym=dnaW,ECK0468,JW0463,plsA;locus_tag=b0474 NC_000913.3 RefSeq CDS 497175 497819 . + 0 ID=cds465;Parent=gene479;Dbxref=ASAP:ABE-0001645,UniProtKB/Swiss-Prot:P69441,Genbank:NP_415007.1,EcoGene:EG10032,GeneID:945097;Name=NP_415007.1;Note=adenylate kinase activity%3B pleiotropic effects on glycerol-3-phosphate acyltransferase activity;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=NP_415007.1;transl_table=11 NC_000913.3 RefSeq repeat_region 497916 497933 . + . ID=id74;Note=REP45 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 498055 499017 . + . ID=gene480;Dbxref=EcoGene:EG10431,GeneID:947532;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;gene_synonym=ECK0469,JW0464,popA,visA;locus_tag=b0475 NC_000913.3 RefSeq CDS 498055 499017 . + 0 ID=cds466;Parent=gene480;Dbxref=ASAP:ABE-0001649,UniProtKB/Swiss-Prot:P23871,Genbank:NP_415008.1,EcoGene:EG10431,GeneID:947532;Name=NP_415008.1;Note=ferrochelatase: final enzyme of heme biosynthesis;gbkey=CDS;gene=hemH;product=ferrochelatase;protein_id=NP_415008.1;transl_table=11 NC_000913.3 RefSeq gene 499014 499973 . - . ID=gene481;Dbxref=EcoGene:EG11101,GeneID:947514;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;gene_synonym=ECK0470,JW0465,ybaC;locus_tag=b0476 NC_000913.3 RefSeq CDS 499014 499973 . - 0 ID=cds467;Parent=gene481;Dbxref=ASAP:ABE-0001651,UniProtKB/Swiss-Prot:P23872,Genbank:NP_415009.1,EcoGene:EG11101,GeneID:947514;Name=NP_415009.1;gbkey=CDS;gene=aes;product=acetyl esterase;protein_id=NP_415009.1;transl_table=11 NC_000913.3 RefSeq gene 500125 501429 . + . ID=gene482;Dbxref=EcoGene:EG11102,GeneID:946584;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;gene_synonym=ECK0471,JW0466;locus_tag=b0477 NC_000913.3 RefSeq CDS 500125 501429 . + 0 ID=cds468;Parent=gene482;Dbxref=ASAP:ABE-0001655,UniProtKB/Swiss-Prot:P0AEW6,Genbank:NP_415010.1,EcoGene:EG11102,GeneID:946584;Name=NP_415010.1;Note=inosine-guanosine kinase;gbkey=CDS;gene=gsk;product=inosine/guanosine kinase;protein_id=NP_415010.1;transl_table=11 NC_000913.3 RefSeq repeat_region 501444 501527 . + . ID=id75;Note=REP46 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 501562 503238 . - . ID=gene483;Dbxref=EcoGene:EG12623,GeneID:946576;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;gene_synonym=ECK0472,JW0467,ylaA;locus_tag=b0478 NC_000913.3 RefSeq CDS 501562 503238 . - 0 ID=cds469;Parent=gene483;Dbxref=ASAP:ABE-0001658,UniProtKB/Swiss-Prot:P39830,Genbank:NP_415011.1,EcoGene:EG12623,GeneID:946576;Name=NP_415011.1;Note=putative transport protein;gbkey=CDS;gene=ybaL;product=inner membrane putative NAD(P)-binding transporter;protein_id=NP_415011.1;transl_table=11 NC_000913.3 RefSeq gene 503476 504696 . - . ID=gene484;Dbxref=EcoGene:EG13268,GeneID:945119;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;gene_synonym=ECK0473,JW0468;locus_tag=b0479 NC_000913.3 RefSeq CDS 503476 504696 . - 0 ID=cds470;Parent=gene484;Dbxref=ASAP:ABE-0001661,UniProtKB/Swiss-Prot:P52067,Genbank:NP_415012.1,EcoGene:EG13268,GeneID:945119;Name=NP_415012.1;Note=fosmidomycin resistance protein;gbkey=CDS;gene=fsr;product=putative fosmidomycin efflux system protein;protein_id=NP_415012.1;transl_table=11 NC_000913.3 RefSeq gene 504914 506566 . + . ID=gene485;Dbxref=EcoGene:EG11060,GeneID:947331;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;gene_synonym=ECK0474,JW0469;locus_tag=b0480 NC_000913.3 RefSeq CDS 504914 506566 . + 0 ID=cds471;Parent=gene485;Dbxref=ASAP:ABE-0001668,UniProtKB/Swiss-Prot:P07024,Genbank:NP_415013.1,EcoGene:EG11060,GeneID:947331;Name=NP_415013.1;Note=UDP-sugar hydrolase (5'-nucleotidase);gbkey=CDS;gene=ushA;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=NP_415013.1;transl_table=11 NC_000913.3 RefSeq repeat_region 506576 506595 . + . ID=id76;Note=REP47 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 506603 507082 . - . ID=gene486;Dbxref=EcoGene:EG12454,GeneID:947083;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;gene_synonym=ECK0475,JW0470,proX;locus_tag=b0481 NC_000913.3 RefSeq CDS 506603 507082 . - 0 ID=cds472;Parent=gene486;Dbxref=ASAP:ABE-0001670,UniProtKB/Swiss-Prot:P0AAR3,Genbank:NP_415014.1,EcoGene:EG12454,GeneID:947083;Name=NP_415014.1;gbkey=CDS;gene=ybaK;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase;protein_id=NP_415014.1;transl_table=11 NC_000913.3 RefSeq gene 507204 507287 . + . ID=gene487;Dbxref=EcoGene:EG31175,GeneID:5061500;Name=chiX;gbkey=Gene;gene=chiX;gene_biotype=antisense_RNA;gene_synonym=ECK4396,er13,micM,rybC,sroB;locus_tag=b4585 NC_000913.3 RefSeq ncRNA 507204 507287 . + . ID=rna14;Parent=gene487;Dbxref=EcoGene:EG31175,GeneID:5061500;gbkey=ncRNA;gene=chiX;ncrna_class=antisense_RNA;product=sRNA antisense regulator of OM chitoporin ChiP(YbfM)%2C Hfq-dependent NC_000913.3 RefSeq exon 507204 507287 . + . ID=id77;Parent=rna14;Dbxref=EcoGene:EG31175,GeneID:5061500;gbkey=ncRNA;gene=chiX;ncrna_class=antisense_RNA;product=sRNA antisense regulator of OM chitoporin ChiP(YbfM)%2C Hfq-dependent NC_000913.3 RefSeq gene 507286 508080 . - . ID=gene488;Dbxref=EcoGene:EG13244,GeneID:945124;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;gene_synonym=ECK0476,JW0471;locus_tag=b0482 NC_000913.3 RefSeq CDS 507286 508080 . - 0 ID=cds473;Parent=gene488;Dbxref=ASAP:ABE-0001673,UniProtKB/Swiss-Prot:P77301,Genbank:NP_415015.1,EcoGene:EG13244,GeneID:945124;Name=NP_415015.1;Note=putative ligase;gbkey=CDS;gene=ybaP;product=TraB family protein;protein_id=NP_415015.1;transl_table=11 NC_000913.3 RefSeq gene 508218 508559 . + . ID=gene489;Dbxref=EcoGene:EG13245,GeneID:948800;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;gene_synonym=ECK0477,JW0472;locus_tag=b0483 NC_000913.3 RefSeq CDS 508218 508559 . + 0 ID=cds474;Parent=gene489;Dbxref=ASAP:ABE-0001677,UniProtKB/Swiss-Prot:P0A9T6,Genbank:NP_415016.4,EcoGene:EG13245,GeneID:948800;Name=NP_415016.4;gbkey=CDS;gene=ybaQ;product=putative DNA-binding transcriptional regulator;protein_id=NP_415016.4;transl_table=11 NC_000913.3 RefSeq repeat_region 508582 508817 . + . ID=id78;Note=REP48 (repetitive extragenic palindromic) element%3B contains 5 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 508875 511379 . - . ID=gene490;Dbxref=EcoGene:EG13246,GeneID:946106;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;gene_synonym=ECK0478,JW0473,ybaR;locus_tag=b0484 NC_000913.3 RefSeq CDS 508875 511379 . - 0 ID=cds475;Parent=gene490;Dbxref=ASAP:ABE-0001681,UniProtKB/Swiss-Prot:Q59385,Genbank:NP_415017.1,EcoGene:EG13246,GeneID:946106;Name=NP_415017.1;gbkey=CDS;gene=copA;product=copper transporter;protein_id=NP_415017.1;transl_table=11 NC_000913.3 RefSeq gene 511641 512573 . + . ID=gene491;Dbxref=EcoGene:EG13247,GeneID:946187;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;gene_synonym=ECK0479,glsA1,JW0474,ybaS;locus_tag=b0485 NC_000913.3 RefSeq CDS 511641 512573 . + 0 ID=cds476;Parent=gene491;Dbxref=ASAP:ABE-0001688,UniProtKB/Swiss-Prot:P77454,Genbank:NP_415018.1,EcoGene:EG13247,GeneID:946187;Name=NP_415018.1;Note=putative glutaminase;gbkey=CDS;gene=glsA;product=glutaminase 1;protein_id=NP_415018.1;transl_table=11 NC_000913.3 RefSeq gene 512576 513868 . + . ID=gene492;Dbxref=EcoGene:EG13248,GeneID:945363;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;gene_synonym=ECK0480,JW0475;locus_tag=b0486 NC_000913.3 RefSeq CDS 512576 513868 . + 0 ID=cds477;Parent=gene492;Dbxref=ASAP:ABE-0001690,UniProtKB/Swiss-Prot:P77400,Genbank:NP_415019.1,EcoGene:EG13248,GeneID:945363;Name=NP_415019.1;Note=putative amino acid/amine transport protein;gbkey=CDS;gene=ybaT;product=putative amino acid transporter;protein_id=NP_415019.1;transl_table=11 NC_000913.3 RefSeq gene 513993 514400 . + . ID=gene493;Dbxref=EcoGene:EG13256,GeneID:945332;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;gene_synonym=ECK0481,JW0476,ybbI;locus_tag=b0487 NC_000913.3 RefSeq CDS 513993 514400 . + 0 ID=cds478;Parent=gene493;Dbxref=ASAP:ABE-0001693,UniProtKB/Swiss-Prot:P0A9G4,Genbank:NP_415020.1,EcoGene:EG13256,GeneID:945332;Name=NP_415020.1;gbkey=CDS;gene=cueR;product=copper-responsive regulon transcriptional regulator;protein_id=NP_415020.1;transl_table=11 NC_000913.3 RefSeq gene 514401 514859 . - . ID=gene494;Dbxref=EcoGene:EG13257,GeneID:945126;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;gene_synonym=ECK0482,JW5065;locus_tag=b0488 NC_000913.3 RefSeq CDS 514401 514859 . - 0 ID=cds479;Parent=gene494;Dbxref=ASAP:ABE-0001695,UniProtKB/Swiss-Prot:P0AAS3,Genbank:NP_415021.2,EcoGene:EG13257,GeneID:945126;Name=NP_415021.2;gbkey=CDS;gene=ybbJ;product=inner membrane protein%3B stimulator of the QmcA suppressor of ftsH-htpX;protein_id=NP_415021.2;transl_table=11 NC_000913.3 RefSeq gene 514856 515773 . - . ID=gene495;Dbxref=EcoGene:EG13258,GeneID:947257;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;gene_synonym=ECK0483,JW0478,ybbK;locus_tag=b0489 NC_000913.3 RefSeq CDS 514856 515773 . - 0 ID=cds480;Parent=gene495;Dbxref=ASAP:ABE-0001697,UniProtKB/Swiss-Prot:P0AA53,Genbank:NP_415022.1,EcoGene:EG13258,GeneID:947257;Name=NP_415022.1;Note=putative protease;gbkey=CDS;gene=qmcA;product=PHB domain membrane-anchored putative protease;protein_id=NP_415022.1;transl_table=11 NC_000913.3 RefSeq gene 515919 516596 . + . ID=gene496;Dbxref=EcoGene:EG13259,GeneID:946990;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ECK0484,JW0479,ybbL;locus_tag=b0490 NC_000913.3 RefSeq CDS 515919 516596 . + 0 ID=cds481;Parent=gene496;Dbxref=ASAP:ABE-0001703,UniProtKB/Swiss-Prot:P77279,Genbank:NP_415023.1,EcoGene:EG13259,GeneID:946990;Name=NP_415023.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=fetA;product=iron export ABC transporter ATPase%3B peroxide resistance protein;protein_id=NP_415023.1;transl_table=11 NC_000913.3 RefSeq gene 516583 517362 . + . ID=gene497;Dbxref=EcoGene:EG13260,GeneID:945137;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;gene_synonym=ECK0485,JW5066,ybbM;locus_tag=b0491 NC_000913.3 RefSeq CDS 516583 517362 . + 0 ID=cds482;Parent=gene497;Dbxref=ASAP:ABE-0001705,UniProtKB/Swiss-Prot:P77307,Genbank:NP_415024.4,EcoGene:EG13260,GeneID:945137;Name=NP_415024.4;Note=putative metal resistance protein;gbkey=CDS;gene=fetB;product=iron export ABC transporter permease%3B peroxide resistance protein;protein_id=NP_415024.4;transl_table=11 NC_000913.3 RefSeq repeat_region 517369 517394 . + . ID=id79;Note=REP49 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 517425 518279 . - . ID=gene498;Dbxref=EcoGene:EG13261,GeneID:947119;Name=ybbN;gbkey=Gene;gene=ybbN;gene_biotype=protein_coding;gene_synonym=ECK0486,JW5067;locus_tag=b0492 NC_000913.3 RefSeq CDS 517425 518279 . - 0 ID=cds483;Parent=gene498;Dbxref=ASAP:ABE-0001707,UniProtKB/Swiss-Prot:P77395,Genbank:NP_415025.4,EcoGene:EG13261,GeneID:947119;Name=NP_415025.4;Note=putative thioredoxin-like protein;gbkey=CDS;gene=ybbN;product=DnaK co-chaperone%2C thioredoxin-like protein;protein_id=NP_415025.4;transl_table=11 NC_000913.3 RefSeq gene 518340 519149 . - . ID=gene499;Dbxref=EcoGene:EG13262,GeneID:945337;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;gene_synonym=ECK0487,JW0482;locus_tag=b0493 NC_000913.3 RefSeq CDS 518340 519149 . - 0 ID=cds484;Parent=gene499;Dbxref=ASAP:ABE-0001709,UniProtKB/Swiss-Prot:P0AFP4,Genbank:NP_415026.1,EcoGene:EG13262,GeneID:945337;Name=NP_415026.1;Note=putative oxidoreductase;gbkey=CDS;gene=ybbO;product=putative oxidoreductase;protein_id=NP_415026.1;transl_table=11 NC_000913.3 RefSeq gene 519139 519765 . - . ID=gene500;Dbxref=EcoGene:EG11542,GeneID:945127;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;gene_synonym=apeA,ECK0488,JW0483,pldC;locus_tag=b0494 NC_000913.3 RefSeq CDS 519139 519765 . - 0 ID=cds485;Parent=gene500;Dbxref=ASAP:ABE-0001713,UniProtKB/Swiss-Prot:P0ADA1,Genbank:NP_415027.1,EcoGene:EG11542,GeneID:945127;Name=NP_415027.1;Note=acyl-CoA thioesterase I%3B also functions as protease I;gbkey=CDS;gene=tesA;product=acyl-CoA thioesterase 1 and protease I and lysophospholipase L1;protein_id=NP_415027.1;transl_table=11 NC_000913.3 RefSeq gene 519733 520419 . + . ID=gene501;Dbxref=EcoGene:EG11657,GeneID:945122;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;gene_synonym=ECK0489,JW0484;locus_tag=b0495 NC_000913.3 RefSeq CDS 519733 520419 . + 0 ID=cds486;Parent=gene501;Dbxref=ASAP:ABE-0001717,UniProtKB/Swiss-Prot:P0A9T8,Genbank:NP_415028.1,EcoGene:EG11657,GeneID:945122;Name=NP_415028.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=ybbA;product=putative ABC transporter ATPase;protein_id=NP_415028.1;transl_table=11 NC_000913.3 RefSeq gene 520416 522830 . + . ID=gene502;Dbxref=EcoGene:EG13263,GeneID:945118;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;gene_synonym=ECK0490,JW0485;locus_tag=b0496 NC_000913.3 RefSeq CDS 520416 522830 . + 0 ID=cds487;Parent=gene502;Dbxref=ASAP:ABE-0001720,UniProtKB/Swiss-Prot:P77504,Genbank:NP_415029.1,EcoGene:EG13263,GeneID:945118;Name=NP_415029.1;Note=putative oxidoreductase;gbkey=CDS;gene=ybbP;product=putative ABC transporter permease;protein_id=NP_415029.1;transl_table=11 NC_000913.3 RefSeq gene 523261 527541 . + . ID=gene503;Dbxref=EcoGene:EG10849,GeneID:945116;Name=rhsD;gbkey=Gene;gene=rhsD;gene_biotype=protein_coding;gene_synonym=ECK0491,JW0486;locus_tag=b0497 NC_000913.3 RefSeq CDS 523261 527541 . + 0 ID=cds488;Parent=gene503;Dbxref=ASAP:ABE-0001724,UniProtKB/Swiss-Prot:P16919,Genbank:NP_415030.1,EcoGene:EG10849,GeneID:945116;Name=NP_415030.1;Note=rhsD protein in rhs element;gbkey=CDS;gene=rhsD;product=Rhs protein with DUF4329 family putative toxin domain%3B putative neighboring cell growth inhibitor;protein_id=NP_415030.1;transl_table=11 NC_000913.3 RefSeq gene 527581 527949 . + . ID=gene504;Dbxref=EcoGene:EG11769,GeneID:945115;Name=ybbC;gbkey=Gene;gene=ybbC;gene_biotype=protein_coding;gene_synonym=ECK0492,JW0487;locus_tag=b0498 NC_000913.3 RefSeq CDS 527581 527949 . + 0 ID=cds489;Parent=gene504;Dbxref=ASAP:ABE-0001726,UniProtKB/Swiss-Prot:P33668,Genbank:NP_415031.1,EcoGene:EG11769,GeneID:945115;Name=NP_415031.1;gbkey=CDS;gene=ybbC;product=putative immunity protein;protein_id=NP_415031.1;transl_table=11 NC_000913.3 RefSeq gene 527952 528659 . + . ID=gene505;Dbxref=EcoGene:EG14327,GeneID:945114;Name=rhsH;gbkey=Gene;gene=rhsH;gene_biotype=pseudogene;gene_synonym=ECK0493,JW0488,ylbH;locus_tag=b0499;pseudo=true NC_000913.3 RefSeq CDS 527952 528659 . + 0 ID=cds490;Parent=gene505;Dbxref=ASAP:ABE-0001729,UniProtKB/Swiss-Prot:P77759,EcoGene:EG14327,GeneID:945114;Note=pseudogene%2C Rhs family C-terminal fragment with unique putative toxin domain;gbkey=CDS;gene=rhsH;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 528640 529130 . + . ID=gene506;Dbxref=EcoGene:EG11770,GeneID:945133;Name=ybbD;gbkey=Gene;gene=ybbD;gene_biotype=pseudogene;gene_synonym=ECK0494,JW0489;locus_tag=b0501;pseudo=true NC_000913.3 RefSeq CDS 528640 529130 . + 0 ID=cds491;Parent=gene506;Dbxref=ASAP:ABE-0001731,UniProtKB/Swiss-Prot:P33669,EcoGene:EG11770,GeneID:945133;Note=pseudogene;gbkey=CDS;gene=ybbD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 529500 529592 . + . ID=gene507;Dbxref=EcoGene:EG14349,GeneID:5625558;Name=ylbI;gbkey=Gene;gene=ylbI;gene_biotype=pseudogene;gene_synonym=ECK4441;locus_tag=b4632;pseudo=true NC_000913.3 RefSeq CDS 529500 529592 . + 0 ID=cds492;Parent=gene507;Dbxref=EcoGene:EG14349,GeneID:5625558;Note=pseudogene%2C Rhs family protein;gbkey=CDS;gene=ylbI;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 529595 530016 . - . ID=gene508;Dbxref=EcoGene:EG14285,GeneID:946803;Name=ylbG;gbkey=Gene;gene=ylbG;gene_biotype=pseudogene;gene_synonym=ECK0495,JW5880;locus_tag=b0502;pseudo=true NC_000913.3 RefSeq CDS 529660 530016 . - 0 ID=cds493;Parent=gene508;Dbxref=ASAP:ABE-0001736,UniProtKB/Swiss-Prot:P77688,EcoGene:EG14285,GeneID:946803;Note=pseudogene%2C DNA-binding transcriptional regulator homology;gbkey=CDS;gene=ylbG;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 529595 529660 . - 0 ID=cds493;Parent=gene508;Dbxref=ASAP:ABE-0001736,UniProtKB/Swiss-Prot:P77688,EcoGene:EG14285,GeneID:946803;Note=pseudogene%2C DNA-binding transcriptional regulator homology;gbkey=CDS;gene=ylbG;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 530132 531226 . - . ID=gene509;Dbxref=EcoGene:EG11768,GeneID:947063;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;gene_synonym=ECK0496,JW0491,selE,selU,ybbB;locus_tag=b0503 NC_000913.3 RefSeq CDS 530132 531226 . - 0 ID=cds494;Parent=gene509;Dbxref=ASAP:ABE-0001740,UniProtKB/Swiss-Prot:P33667,Genbank:NP_415036.1,EcoGene:EG11768,GeneID:947063;Name=NP_415036.1;Note=putative capsule anchoring protein;gbkey=CDS;gene=mnmH;product=tRNA 2-selenouridine synthase%2C selenophosphate-dependent;protein_id=NP_415036.1;transl_table=11 NC_000913.3 RefSeq gene 531295 532221 . - . ID=gene510;Dbxref=EcoGene:EG13267,GeneID:945139;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;gene_synonym=ECK0497,glxA1,JW0492,ybbS;locus_tag=b0504 NC_000913.3 RefSeq CDS 531295 532221 . - 0 ID=cds495;Parent=gene510;Dbxref=ASAP:ABE-0001742,UniProtKB/Swiss-Prot:P0ACR0,Genbank:NP_415037.1,EcoGene:EG13267,GeneID:945139;Name=NP_415037.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=allS;product=allD operon transcriptional activator;protein_id=NP_415037.1;transl_table=11 NC_000913.3 RefSeq gene 532451 532933 . + . ID=gene511;Dbxref=EcoGene:EG13615,GeneID:945141;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;gene_synonym=ECK0498,glxA2,JW0493,ybbT;locus_tag=b0505 NC_000913.3 RefSeq CDS 532451 532933 . + 0 ID=cds496;Parent=gene511;Dbxref=ASAP:ABE-0001747,UniProtKB/Swiss-Prot:P77731,Genbank:NP_415038.1,EcoGene:EG13615,GeneID:945141;Name=NP_415038.1;gbkey=CDS;gene=allA;product=ureidoglycolate lyase%2C releasing urea;protein_id=NP_415038.1;transl_table=11 NC_000913.3 RefSeq gene 533011 533826 . + . ID=gene512;Dbxref=EcoGene:EG13616,GeneID:945333;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;gene_synonym=ECK0499,gclR,glxA3,JW0494,ybbU;locus_tag=b0506 NC_000913.3 RefSeq CDS 533011 533826 . + 0 ID=cds497;Parent=gene512;Dbxref=ASAP:ABE-0001750,UniProtKB/Swiss-Prot:P0ACN4,Genbank:NP_415039.1,EcoGene:EG13616,GeneID:945333;Name=NP_415039.1;gbkey=CDS;gene=allR;product=glyoxylate-inducible transcriptional repressor of all and gcl operons;protein_id=NP_415039.1;transl_table=11 NC_000913.3 RefSeq gene 533916 535697 . + . ID=gene513;Dbxref=EcoGene:EG11583,GeneID:945394;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;gene_synonym=ECK0500,JW0495;locus_tag=b0507 NC_000913.3 RefSeq CDS 533916 535697 . + 0 ID=cds498;Parent=gene513;Dbxref=ASAP:ABE-0001754,UniProtKB/Swiss-Prot:P0AEP7,Genbank:NP_415040.1,EcoGene:EG11583,GeneID:945394;Name=NP_415040.1;gbkey=CDS;gene=gcl;product=glyoxylate carboligase;protein_id=NP_415040.1;transl_table=11 NC_000913.3 RefSeq gene 535710 536486 . + . ID=gene514;Dbxref=EcoGene:EG11584,GeneID:946186;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;gene_synonym=ECK0501,gip,JW0496,ybbG;locus_tag=b0508 NC_000913.3 RefSeq CDS 535710 536486 . + 0 ID=cds499;Parent=gene514;Dbxref=ASAP:ABE-0001756,UniProtKB/Swiss-Prot:P30147,Genbank:NP_415041.1,EcoGene:EG11584,GeneID:946186;Name=NP_415041.1;gbkey=CDS;gene=hyi;product=hydroxypyruvate isomerase;protein_id=NP_415041.1;transl_table=11 NC_000913.3 RefSeq gene 536586 537464 . + . ID=gene515;Dbxref=EcoGene:EG13265,GeneID:945146;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;gene_synonym=ECK0502,glxB1,JW0497,ybbQ;locus_tag=b0509 NC_000913.3 RefSeq CDS 536586 537464 . + 0 ID=cds500;Parent=gene515;Dbxref=ASAP:ABE-0001759,UniProtKB/Swiss-Prot:P77161,Genbank:NP_415042.1,EcoGene:EG13265,GeneID:945146;Name=NP_415042.1;gbkey=CDS;gene=glxR;product=tartronate semialdehyde reductase%2C NADH-dependent;protein_id=NP_415042.1;transl_table=11 NC_000913.3 RefSeq gene 537633 539087 . + . ID=gene516;Dbxref=EcoGene:EG13618,GeneID:945138;Name=ybbW;gbkey=Gene;gene=ybbW;gene_biotype=protein_coding;gene_synonym=allP,ECK0504,glxB2,JW0499;locus_tag=b0511 NC_000913.3 RefSeq CDS 537633 539087 . + 0 ID=cds501;Parent=gene516;Dbxref=ASAP:ABE-0001764,UniProtKB/Swiss-Prot:P75712,Genbank:NP_415044.4,EcoGene:EG13618,GeneID:945138;Name=NP_415044.4;gbkey=CDS;gene=ybbW;product=putative allantoin transporter;protein_id=NP_415044.4;transl_table=11 NC_000913.3 RefSeq gene 539147 540508 . + . ID=gene517;Dbxref=EcoGene:EG13619,GeneID:945134;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;gene_synonym=ECK0505,glxB3,JW0500,ybbX;locus_tag=b0512 NC_000913.3 RefSeq CDS 539147 540508 . + 0 ID=cds502;Parent=gene517;Dbxref=ASAP:ABE-0001768,UniProtKB/Swiss-Prot:P77671,Genbank:NP_415045.1,EcoGene:EG13619,GeneID:945134;Name=NP_415045.1;gbkey=CDS;gene=allB;product=allantoinase;protein_id=NP_415045.1;transl_table=11 NC_000913.3 RefSeq gene 540565 541866 . + . ID=gene518;Dbxref=EcoGene:EG13620,GeneID:945131;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;gene_synonym=ECK0506,glxB4,JW0501;locus_tag=b0513 NC_000913.3 RefSeq CDS 540565 541866 . + 0 ID=cds503;Parent=gene518;Dbxref=ASAP:ABE-0001771,UniProtKB/Swiss-Prot:P77328,Genbank:NP_415046.4,EcoGene:EG13620,GeneID:945131;Name=NP_415046.4;gbkey=CDS;gene=ybbY;product=putative uracil/xanthine transporter;protein_id=NP_415046.4;transl_table=11 NC_000913.3 RefSeq gene 541888 543033 . + . ID=gene519;Dbxref=EcoGene:EG13621,GeneID:945129;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;gene_synonym=ECK0507,glxB5,JW0502,ybbZ;locus_tag=b0514 NC_000913.3 RefSeq CDS 541888 543033 . + 0 ID=cds504;Parent=gene519;Dbxref=ASAP:ABE-0001773,UniProtKB/Swiss-Prot:P77364,Genbank:NP_415047.1,EcoGene:EG13621,GeneID:945129;Name=NP_415047.1;gbkey=CDS;gene=glxK;product=glycerate kinase II;protein_id=NP_415047.1;transl_table=11 NC_000913.3 RefSeq repeat_region 543087 543183 . + . ID=id80;Note=RIP50 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 543261 544046 . - . ID=gene520;Dbxref=EcoGene:EG13622,GeneID:945149;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;gene_synonym=ECK0508,glxB6,JW0503,ughY,ylbA;locus_tag=b0515 NC_000913.3 RefSeq CDS 543261 544046 . - 0 ID=cds505;Parent=gene520;Dbxref=ASAP:ABE-0001775,UniProtKB/Swiss-Prot:P75713,Genbank:NP_415048.1,EcoGene:EG13622,GeneID:945149;Name=NP_415048.1;gbkey=CDS;gene=allE;product=S-ureidoglycine aminohydrolase;protein_id=NP_415048.1;transl_table=11 NC_000913.3 RefSeq gene 544057 545292 . - . ID=gene521;Dbxref=EcoGene:EG13623,GeneID:945150;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;gene_synonym=ECK0509,glxB7,JW0504,ylbB;locus_tag=b0516 NC_000913.3 RefSeq CDS 544057 545292 . - 0 ID=cds506;Parent=gene521;Dbxref=ASAP:ABE-0001777,UniProtKB/Swiss-Prot:P77425,Genbank:NP_415049.1,EcoGene:EG13623,GeneID:945150;Name=NP_415049.1;gbkey=CDS;gene=allC;product=allantoate amidohydrolase;protein_id=NP_415049.1;transl_table=11 NC_000913.3 RefSeq gene 545314 546363 . - . ID=gene522;Dbxref=EcoGene:EG13624,GeneID:948342;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;gene_synonym=ECK0510,glxB8,JW0505,ylbC;locus_tag=b0517 NC_000913.3 RefSeq CDS 545314 546363 . - 0 ID=cds507;Parent=gene522;Dbxref=ASAP:ABE-0001780,UniProtKB/Swiss-Prot:P77555,Genbank:NP_415050.1,EcoGene:EG13624,GeneID:948342;Name=NP_415050.1;gbkey=CDS;gene=allD;product=ureidoglycolate dehydrogenase;protein_id=NP_415050.1;transl_table=11 NC_000913.3 RefSeq gene 546680 548347 . + . ID=gene523;Dbxref=EcoGene:EG13399,GeneID:946298;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;gene_synonym=ECK0511,JW0506,ylbD;locus_tag=b0518 NC_000913.3 RefSeq CDS 546680 548347 . + 0 ID=cds508;Parent=gene523;Dbxref=ASAP:ABE-0001784,UniProtKB/Swiss-Prot:Q47208,Genbank:NP_415051.1,EcoGene:EG13399,GeneID:946298;Name=NP_415051.1;Note=involved in protein transport%3B multicopy suppressor of dominant negative ftsH mutants;gbkey=CDS;gene=fdrA;product=putative NAD(P)-binding acyl-CoA synthetase;protein_id=NP_415051.1;transl_table=11 NC_000913.3 RefSeq gene 548357 549616 . + . ID=gene524;Dbxref=EcoGene:EG13398,GeneID:4056025;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;gene_synonym=ECK0512,JW0507,JW0508;locus_tag=b4572 NC_000913.3 RefSeq CDS 548357 549616 . + 0 ID=cds509;Parent=gene524;Dbxref=ASAP:ABE-0001787,ASAP:ABE-0285028,ASAP:ABE-0285105,UniProtKB/Swiss-Prot:P77129,Genbank:YP_009029994.1,EcoGene:EG13398,GeneID:4056025;Name=YP_009029994.1;gbkey=CDS;gene=ylbE;product=NO-induced DUF1116 protein;protein_id=YP_009029994.1;transl_table=11 NC_000913.3 RefSeq gene 549627 550442 . + . ID=gene525;Dbxref=EcoGene:EG13626,GeneID:945195;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;gene_synonym=ECK0513,JW0509;locus_tag=b0520 NC_000913.3 RefSeq CDS 549627 550442 . + 0 ID=cds510;Parent=gene525;Dbxref=ASAP:ABE-0001789,UniProtKB/Swiss-Prot:P0AAS5,Genbank:NP_415053.1,EcoGene:EG13626,GeneID:945195;Name=NP_415053.1;Note=putative carboxylase;gbkey=CDS;gene=ylbF;product=putative anaerobic allantoin catabolic oxamate carbamoyltransferase%3B DUF2877 family protein;protein_id=NP_415053.1;transl_table=11 NC_000913.3 RefSeq gene 550439 551332 . + . ID=gene526;Dbxref=EcoGene:EG12384,GeneID:944972;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;gene_synonym=arcC,ECK0514,JW0510;locus_tag=b0521 NC_000913.3 RefSeq CDS 550439 551332 . + 0 ID=cds511;Parent=gene526;Dbxref=ASAP:ABE-0001791,UniProtKB/Swiss-Prot:P37306,Genbank:NP_415054.1,EcoGene:EG12384,GeneID:944972;Name=NP_415054.1;Note=putative carbamate kinase;gbkey=CDS;gene=ybcF;product=putative carbonate kinase;protein_id=NP_415054.1;transl_table=11 NC_000913.3 RefSeq repeat_region 551354 551510 . + . ID=id81;Note=REP52 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 551527 552594 . - . ID=gene527;Dbxref=EcoGene:EG10796,GeneID:945153;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;gene_synonym=ECK0515,JW0511,purE2;locus_tag=b0522 NC_000913.3 RefSeq CDS 551527 552594 . - 0 ID=cds512;Parent=gene527;Dbxref=ASAP:ABE-0001794,UniProtKB/Swiss-Prot:P09029,Genbank:NP_415055.1,EcoGene:EG10796,GeneID:945153;Name=NP_415055.1;Note=phosphoribosylaminoimidazole carboxylase %3D AIR carboxylase%2C CO(2)-fixing subunit;gbkey=CDS;gene=purK;product=N5-carboxyaminoimidazole ribonucleotide synthase;protein_id=NP_415055.1;transl_table=11 NC_000913.3 RefSeq gene 552591 553100 . - . ID=gene528;Dbxref=EcoGene:EG10793,GeneID:949031;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;gene_synonym=ade,ade3,ECK0516,JW0512,Pur2;locus_tag=b0523 NC_000913.3 RefSeq CDS 552591 553100 . - 0 ID=cds513;Parent=gene528;Dbxref=ASAP:ABE-0001796,UniProtKB/Swiss-Prot:P0AG18,Genbank:NP_415056.1,EcoGene:EG10793,GeneID:949031;Name=NP_415056.1;Note=phosphoribosylaminoimidazole carboxylase %3D AIR carboxylase%2C catalytic subunit;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=NP_415056.1;transl_table=11 NC_000913.3 RefSeq gene 553218 553940 . - . ID=gene529;Dbxref=EcoGene:EG12666,GeneID:949053;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;gene_synonym=ECK0517,JW0513,ybbF;locus_tag=b0524 NC_000913.3 RefSeq CDS 553218 553940 . - 0 ID=cds514;Parent=gene529;Dbxref=ASAP:ABE-0001804,UniProtKB/Swiss-Prot:P43341,Genbank:NP_415057.1,EcoGene:EG12666,GeneID:949053;Name=NP_415057.1;gbkey=CDS;gene=lpxH;product=UDP-2%2C3-diacylglucosamine pyrophosphohydrolase;protein_id=NP_415057.1;transl_table=11 NC_000913.3 RefSeq gene 553943 554437 . - . ID=gene530;Dbxref=EcoGene:EG10758,GeneID:949038;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;gene_synonym=ECK0518,JW0514;locus_tag=b0525 NC_000913.3 RefSeq CDS 553943 554437 . - 0 ID=cds515;Parent=gene530;Dbxref=ASAP:ABE-0001806,UniProtKB/Swiss-Prot:P23869,Genbank:NP_415058.1,EcoGene:EG10758,GeneID:949038;Name=NP_415058.1;gbkey=CDS;gene=ppiB;product=peptidyl-prolyl cis-trans isomerase B (rotamase B);protein_id=NP_415058.1;transl_table=11 NC_000913.3 RefSeq gene 554611 555996 . + . ID=gene531;Dbxref=EcoGene:EG10196,GeneID:946969;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;gene_synonym=ECK0519,JW0515;locus_tag=b0526 NC_000913.3 RefSeq CDS 554611 555996 . + 0 ID=cds516;Parent=gene531;Dbxref=ASAP:ABE-0001810,UniProtKB/Swiss-Prot:P21888,Genbank:NP_415059.1,EcoGene:EG10196,GeneID:946969;Name=NP_415059.1;Note=cysteine tRNA synthetase;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=NP_415059.1;transl_table=11 NC_000913.3 RefSeq repeat_region 556007 556032 . + . ID=id82;Note=REP53 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 556032 556553 . - . ID=gene532;Dbxref=EcoGene:EG12708,GeneID:945155;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;gene_synonym=ECK0520,JW0516;locus_tag=b0527 NC_000913.3 RefSeq CDS 556032 556553 . - 0 ID=cds517;Parent=gene532;Dbxref=ASAP:ABE-0001812,UniProtKB/Swiss-Prot:P45570,Genbank:NP_415060.1,EcoGene:EG12708,GeneID:945155;Name=NP_415060.1;gbkey=CDS;gene=ybcI;product=DUF457 family inner membrane protein;protein_id=NP_415060.1;transl_table=11 NC_000913.3 RefSeq gene 556661 556873 . - . ID=gene533;Dbxref=EcoGene:EG12879,GeneID:945158;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;gene_synonym=ECK0521,JW5070;locus_tag=b0528 NC_000913.3 RefSeq CDS 556661 556873 . - 0 ID=cds518;Parent=gene533;Dbxref=ASAP:ABE-0001816,UniProtKB/Swiss-Prot:P0AAS7,Genbank:NP_415061.2,EcoGene:EG12879,GeneID:945158;Name=NP_415061.2;gbkey=CDS;gene=ybcJ;product=ribosome-associated protein%3B putative RNA-binding protein;protein_id=NP_415061.2;transl_table=11 NC_000913.3 RefSeq gene 556875 557741 . - . ID=gene534;Dbxref=EcoGene:EG10328,GeneID:945221;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;gene_synonym=ads,ECK0522,JW0518;locus_tag=b0529 NC_000913.3 RefSeq CDS 556875 557741 . - 0 ID=cds519;Parent=gene534;Dbxref=ASAP:ABE-0001818,UniProtKB/Swiss-Prot:P24186,Genbank:NP_415062.1,EcoGene:EG10328,GeneID:945221;Name=NP_415062.1;Note=5%2C10-methylene-tetrahydrofolate dehydrogenase%3B 5%2C10-methylene-tetrahydrofolate cyclohydrolase;gbkey=CDS;gene=folD;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=NP_415062.1;transl_table=11 NC_000913.3 RefSeq gene 558212 558754 . + . ID=gene535;Dbxref=EcoGene:EG13881,GeneID:945522;Name=sfmA;gbkey=Gene;gene=sfmA;gene_biotype=protein_coding;gene_synonym=ECK0523,fimA,JW0519;locus_tag=b0530 NC_000913.3 RefSeq CDS 558212 558754 . + 0 ID=cds520;Parent=gene535;Dbxref=ASAP:ABE-0001825,UniProtKB/Swiss-Prot:P0ABW5,Genbank:NP_415063.4,EcoGene:EG13881,GeneID:945522;Name=NP_415063.4;Note=putative fimbrial-like protein;gbkey=CDS;gene=sfmA;product=FimA homolog%2C function unknown;protein_id=NP_415063.4;transl_table=11 NC_000913.3 RefSeq gene 558974 559666 . + . ID=gene536;Dbxref=EcoGene:EG13882,GeneID:945367;Name=sfmC;gbkey=Gene;gene=sfmC;gene_biotype=protein_coding;gene_synonym=ECK0524,fimC,JW0520;locus_tag=b0531 NC_000913.3 RefSeq CDS 558974 559666 . + 0 ID=cds521;Parent=gene536;Dbxref=ASAP:ABE-0001828,UniProtKB/Swiss-Prot:P77249,Genbank:NP_415064.1,EcoGene:EG13882,GeneID:945367;Name=NP_415064.1;Note=putative chaperone;gbkey=CDS;gene=sfmC;product=putative periplasmic pilus chaperone;protein_id=NP_415064.1;transl_table=11 NC_000913.3 RefSeq gene 559697 562300 . + . ID=gene537;Dbxref=EcoGene:EG13883,GeneID:945160;Name=sfmD;gbkey=Gene;gene=sfmD;gene_biotype=protein_coding;gene_synonym=ECK0525,fimD,JW0521;locus_tag=b0532 NC_000913.3 RefSeq CDS 559697 562300 . + 0 ID=cds522;Parent=gene537;Dbxref=ASAP:ABE-0001830,UniProtKB/Swiss-Prot:P77468,Genbank:NP_415065.1,EcoGene:EG13883,GeneID:945160;Name=NP_415065.1;Note=putative outer membrane protein%2C export function;gbkey=CDS;gene=sfmD;product=putative outer membrane export usher protein;protein_id=NP_415065.1;transl_table=11 NC_000913.3 RefSeq gene 562336 563319 . + . ID=gene538;Dbxref=EcoGene:EG13884,GeneID:945407;Name=sfmH;gbkey=Gene;gene=sfmH;gene_biotype=protein_coding;gene_synonym=ECK0526,fimH,JW5071;locus_tag=b0533 NC_000913.3 RefSeq CDS 562336 563319 . + 0 ID=cds523;Parent=gene538;Dbxref=ASAP:ABE-0001832,UniProtKB/Swiss-Prot:P75715,Genbank:NP_415066.2,EcoGene:EG13884,GeneID:945407;Name=NP_415066.2;Note=involved in fimbrial asembly;gbkey=CDS;gene=sfmH;product=FimA homolog%2C function unknown;protein_id=NP_415066.2;transl_table=11 NC_000913.3 RefSeq gene 563330 563845 . + . ID=gene539;Dbxref=EcoGene:EG12388,GeneID:944977;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;gene_synonym=ECK0527,fimF,JW5072,ybcG;locus_tag=b0534 NC_000913.3 RefSeq CDS 563330 563845 . + 0 ID=cds524;Parent=gene539;Dbxref=ASAP:ABE-0001834,UniProtKB/Swiss-Prot:P38052,Genbank:NP_415067.1,EcoGene:EG12388,GeneID:944977;Name=NP_415067.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=sfmF;product=FimA homolog%2C function unknown;protein_id=NP_415067.1;transl_table=11 NC_000913.3 RefSeq gene 563848 564480 . - . ID=gene540;Dbxref=EcoGene:EG11103,GeneID:947079;Name=sfmZ;gbkey=Gene;gene=sfmZ;gene_biotype=protein_coding;gene_synonym=ECK0528,fimZ,JW5073,ybcA;locus_tag=b0535 NC_000913.3 RefSeq CDS 563848 564480 . - 0 ID=cds525;Parent=gene540;Dbxref=ASAP:ABE-0001836,UniProtKB/Swiss-Prot:P0AEL8,Genbank:NP_415068.1,EcoGene:EG11103,GeneID:947079;Name=NP_415068.1;Note=fimbrial Z protein%3B probable signal transducer;gbkey=CDS;gene=sfmZ;product=response regulator family protein;protein_id=NP_415068.1;transl_table=11 NC_000913.3 RefSeq gene 564723 564799 . + . ID=gene541;Dbxref=EcoGene:EG30014,GeneID:945161;Name=argU;gbkey=Gene;gene=argU;gene_biotype=tRNA;gene_synonym=dnaY,ECK0529,fimU,JWR0010,pin;locus_tag=b0536 NC_000913.3 RefSeq tRNA 564723 564799 . + . ID=rna15;Parent=gene541;Dbxref=ASAP:ABE-0001840,EcoGene:EG30014,GeneID:945161;Note=anticodon: UCU;gbkey=tRNA;gene=argU;product=tRNA-Arg NC_000913.3 RefSeq exon 564723 564799 . + . ID=id83;Parent=rna15;Dbxref=ASAP:ABE-0001840,EcoGene:EG30014,GeneID:945161;Note=anticodon: UCU;gbkey=tRNA;gene=argU;product=tRNA-Arg NC_000913.3 RefSeq region 564802 586103 . + . ID=id84;Note=cryptic prophage DLP12;gbkey=misc_feature NC_000913.3 RefSeq gene 564815 565978 . - . ID=gene542;Dbxref=EcoGene:EG10507,GeneID:947162;Name=intD;gbkey=Gene;gene=intD;gene_biotype=protein_coding;gene_synonym=ECK0530,int,JW0525;locus_tag=b0537 NC_000913.3 RefSeq CDS 564815 565978 . - 0 ID=cds526;Parent=gene542;Dbxref=ASAP:ABE-0001842,UniProtKB/Swiss-Prot:P24218,Genbank:NP_415069.1,EcoGene:EG10507,GeneID:947162;Name=NP_415069.1;Note=prophage DLP12 integrase;gbkey=CDS;gene=intD;product=DLP12 prophage%3B putative phage integrase;protein_id=NP_415069.1;transl_table=11 NC_000913.3 RefSeq gene 565858 566079 . - . ID=gene543;Dbxref=EcoGene:EG12348,GeneID:5625559;Name=xisD;gbkey=Gene;gene=xisD;gene_biotype=pseudogene;gene_synonym=ECK4435,ybcB;locus_tag=b4633;pseudo=true NC_000913.3 RefSeq CDS 565858 566079 . - 0 ID=cds527;Parent=gene543;Dbxref=EcoGene:EG12348,GeneID:5625559;Note=pseudogene%2C exisionase in defective prophage DLP12%3BPhage or Prophage Related;gbkey=CDS;gene=xisD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 566098 566376 . - . ID=gene544;Dbxref=EcoGene:EG12349,GeneID:947902;Name=exoD;gbkey=Gene;gene=exoD;gene_biotype=pseudogene;gene_synonym=ECK0531,JW0526,ybcC;locus_tag=b0539;pseudo=true NC_000913.3 RefSeq CDS 566098 566376 . - 0 ID=cds528;Parent=gene544;Dbxref=ASAP:ABE-0001850,UniProtKB/Swiss-Prot:P75717,EcoGene:EG12349,GeneID:947902;Note=pseudogene%2C DLP12 prophage%3B phage-type exonuclease family%3BPhage or Prophage Related;gbkey=CDS;gene=exoD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 566376 566687 . + . ID=gene545;Dbxref=EcoGene:EG12350,GeneID:945299;Name=peaD;gbkey=Gene;gene=peaD;gene_biotype=pseudogene;gene_synonym=ECK0532,JW0527,ybcD;locus_tag=b4508;pseudo=true NC_000913.3 RefSeq CDS 566376 566687 . + 0 ID=cds529;Parent=gene545;Dbxref=ASAP:ABE-0285029,UniProtKB/Swiss-Prot:P77528,EcoGene:EG12350,GeneID:945299;Note=pseudogene%3B DLP12 prophage%3B replication protein family%3BPhage or Prophage Related;gbkey=CDS;gene=peaD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 566684 566776 . + . ID=gene546;Dbxref=EcoGene:EG12351,GeneID:945024;Name=renD;gbkey=Gene;gene=renD;gene_biotype=pseudogene;gene_synonym=ECK0533,JW0530,ybcE;locus_tag=b0542;part=1/2;pseudo=true NC_000913.3 RefSeq gene 568035 568247 . + . ID=gene546;Dbxref=EcoGene:EG12351,GeneID:945024;Name=renD;gbkey=Gene;gene=renD;gene_biotype=pseudogene;gene_synonym=ECK0533,JW0530,ybcE;locus_tag=b0542;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 566684 566776 . + 0 ID=cds530;Parent=gene546;Dbxref=ASAP:ABE-0001860,UniProtKB/Swiss-Prot:P75718,EcoGene:EG12351,GeneID:945024;Note=pseudogene%2C DLP12 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=renD;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 568035 568247 . + 0 ID=cds530;Parent=gene546;Dbxref=ASAP:ABE-0001860,UniProtKB/Swiss-Prot:P75718,EcoGene:EG12351,GeneID:945024;Note=pseudogene%2C DLP12 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=renD;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 566777 568034 . + . ID=id85;gbkey=mobile_element NC_000913.3 RefSeq gene 566842 567141 . + . ID=gene547;Dbxref=EcoGene:EG40005,GeneID:945759;Name=insE1;gbkey=Gene;gene=insE1;gene_biotype=protein_coding;gene_synonym=ECK0298;locus_tag=b0540 NC_000913.3 RefSeq CDS 566842 567141 . + 0 ID=cds531;Parent=gene547;Dbxref=ASAP:ABE-0001855,UniProtKB/Swiss-Prot:P0CF68,Genbank:NP_415072.2,EcoGene:EG40005,GeneID:945759;Name=NP_415072.2;gbkey=CDS;gene=insE1;product=IS3 transposase A;protein_id=NP_415072.2;transl_table=11 NC_000913.3 RefSeq gene 567138 568004 . + . ID=gene548;Dbxref=EcoGene:EG40006,GeneID:947988;Name=insF1;gbkey=Gene;gene=insF1;gene_biotype=protein_coding;gene_synonym=ECK0299;locus_tag=b0541 NC_000913.3 RefSeq CDS 567138 568004 . + 0 ID=cds532;Parent=gene548;Dbxref=ASAP:ABE-0001857,UniProtKB/Swiss-Prot:P0CF81,Genbank:NP_415073.1,EcoGene:EG40006,GeneID:947988;Name=NP_415073.1;gbkey=CDS;gene=insF1;product=IS3 transposase B;protein_id=NP_415073.1;transl_table=11 NC_000913.3 RefSeq gene 568315 568647 . + . ID=gene549;Dbxref=EcoGene:EG10629,GeneID:948442;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;gene_synonym=eb,ECK0534,JW0531,mvrC;locus_tag=b0543 NC_000913.3 RefSeq CDS 568315 568647 . + 0 ID=cds533;Parent=gene549;Dbxref=ASAP:ABE-0001863,UniProtKB/Swiss-Prot:P23895,Genbank:NP_415075.1,EcoGene:EG10629,GeneID:948442;Name=NP_415075.1;Note=methylviologen resistance;gbkey=CDS;gene=emrE;product=DLP12 prophage%3B multidrug resistance protein;protein_id=NP_415075.1;transl_table=11 NC_000913.3 RefSeq gene 568902 570428 . + . ID=gene550;Dbxref=EcoGene:EG13627,GeneID:945166;Name=ybcK;gbkey=Gene;gene=ybcK;gene_biotype=protein_coding;gene_synonym=ECK0535,JW0532;locus_tag=b0544 NC_000913.3 RefSeq CDS 568902 570428 . + 0 ID=cds534;Parent=gene550;Dbxref=ASAP:ABE-0001866,UniProtKB/Swiss-Prot:P77698,Genbank:NP_415076.1,EcoGene:EG13627,GeneID:945166;Name=NP_415076.1;gbkey=CDS;gene=ybcK;product=DLP12 prophage%3B putative recombinase;protein_id=NP_415076.1;transl_table=11 NC_000913.3 RefSeq gene 570893 571444 . + . ID=gene551;Dbxref=EcoGene:EG13628,GeneID:945165;Name=ybcL;gbkey=Gene;gene=ybcL;gene_biotype=protein_coding;gene_synonym=ECK0536,JW0533;locus_tag=b0545 NC_000913.3 RefSeq CDS 570893 571444 . + 0 ID=cds535;Parent=gene551;Dbxref=ASAP:ABE-0001869,UniProtKB/Swiss-Prot:P77368,Genbank:NP_415077.1,EcoGene:EG13628,GeneID:945165;Name=NP_415077.1;gbkey=CDS;gene=ybcL;product=inactive polymorphonuclear leukocyte migration suppressor%3B DLP12 prophage%3B UPF0098 family secreted protein;protein_id=NP_415077.1;transl_table=11 NC_000913.3 RefSeq gene 571454 572251 . + . ID=gene552;Dbxref=EcoGene:EG13629,GeneID:945163;Name=ybcM;gbkey=Gene;gene=ybcM;gene_biotype=protein_coding;gene_synonym=ECK0537,JW0534;locus_tag=b0546 NC_000913.3 RefSeq CDS 571454 572251 . + 0 ID=cds536;Parent=gene552;Dbxref=ASAP:ABE-0001871,UniProtKB/Swiss-Prot:P77634,Genbank:NP_415078.1,EcoGene:EG13629,GeneID:945163;Name=NP_415078.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=ybcM;product=DLP12 prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_415078.1;transl_table=11 NC_000913.3 RefSeq gene 572368 572469 . + . ID=gene553;Dbxref=EcoGene:EG14355,GeneID:5061504;Name=ylcH;gbkey=Gene;gene=ylcH;gene_biotype=protein_coding;gene_synonym=ECK4398;locus_tag=b4588 NC_000913.3 RefSeq CDS 572368 572469 . + 0 ID=cds537;Parent=gene553;Dbxref=UniProtKB/Swiss-Prot:Q47268,Genbank:YP_001165308.1,EcoGene:EG14355,GeneID:5061504;Name=YP_001165308.1;gbkey=CDS;gene=ylcH;product=uncharacterized protein%2C DLP12 prophage;protein_id=YP_001165308.1;transl_table=11 NC_000913.3 RefSeq gene 572466 572921 . + . ID=gene554;Dbxref=EcoGene:EG13630,GeneID:945162;Name=ybcN;gbkey=Gene;gene=ybcN;gene_biotype=protein_coding;gene_synonym=ECK0538,JW0535;locus_tag=b0547 NC_000913.3 RefSeq CDS 572466 572921 . + 0 ID=cds538;Parent=gene554;Dbxref=ASAP:ABE-0001874,UniProtKB/Swiss-Prot:Q47269,Genbank:NP_415079.1,EcoGene:EG13630,GeneID:945162;Name=NP_415079.1;gbkey=CDS;gene=ybcN;product=DLP12 prophage%3B uncharacterized protein;protein_id=NP_415079.1;transl_table=11 NC_000913.3 RefSeq gene 572921 573091 . + . ID=gene555;Dbxref=EcoGene:EG14286,GeneID:945151;Name=ninE;gbkey=Gene;gene=ninE;gene_biotype=protein_coding;gene_synonym=ECK0539,JW0536;locus_tag=b0548 NC_000913.3 RefSeq CDS 572921 573091 . + 0 ID=cds539;Parent=gene555;Dbxref=ASAP:ABE-0001876,UniProtKB/Swiss-Prot:Q47270,Genbank:NP_415080.1,EcoGene:EG14286,GeneID:945151;Name=NP_415080.1;Note=similar to phage 82 and lambda proteins;gbkey=CDS;gene=ninE;product=DLP12 prophage%3B conserved protein;protein_id=NP_415080.1;transl_table=11 NC_000913.3 RefSeq gene 573084 573374 . + . ID=gene556;Dbxref=EcoGene:EG13631,GeneID:945147;Name=ybcO;gbkey=Gene;gene=ybcO;gene_biotype=protein_coding;gene_synonym=ECK0540,JW0537;locus_tag=b0549 NC_000913.3 RefSeq CDS 573084 573374 . + 0 ID=cds540;Parent=gene556;Dbxref=ASAP:ABE-0001878,UniProtKB/Swiss-Prot:P68661,Genbank:NP_415081.1,EcoGene:EG13631,GeneID:945147;Name=NP_415081.1;gbkey=CDS;gene=ybcO;product=DLP12 prophage%3B uncharacterized protein;protein_id=NP_415081.1;transl_table=11 NC_000913.3 RefSeq gene 573371 573733 . + . ID=gene557;Dbxref=EcoGene:EG20283,GeneID:945174;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;gene_synonym=ECK0541,JW0538,rus,ybcP;locus_tag=b0550 NC_000913.3 RefSeq CDS 573371 573733 . + 0 ID=cds541;Parent=gene557;Dbxref=ASAP:ABE-0001880,UniProtKB/Swiss-Prot:P0AG74,Genbank:NP_415082.1,EcoGene:EG20283,GeneID:945174;Name=NP_415082.1;Note=endodeoxyribonuclease RUS (Holliday junction resolvase);gbkey=CDS;gene=rusA;product=DLP12 prophage%3B endonuclease RUS;protein_id=NP_415082.1;transl_table=11 NC_000913.3 RefSeq gene 573730 573870 . + . ID=gene558;Dbxref=EcoGene:EG14354,GeneID:1450240;Name=ylcG;gbkey=Gene;gene=ylcG;gene_biotype=protein_coding;gene_synonym=ECK0542,JW5076;locus_tag=b4509 NC_000913.3 RefSeq CDS 573730 573870 . + 0 ID=cds542;Parent=gene558;Dbxref=ASAP:ABE-0285030,UniProtKB/Swiss-Prot:Q47272,Genbank:YP_588439.1,EcoGene:EG14354,GeneID:1450240;Name=YP_588439.1;gbkey=CDS;gene=ylcG;product=uncharacterized protein%2C DLP12 prophage;protein_id=YP_588439.1;transl_table=11 NC_000913.3 RefSeq gene 573956 574339 . + . ID=gene559;Dbxref=EcoGene:EG13633,GeneID:945177;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=protein_coding;gene_synonym=ECK0543,JW0539,ybcQ;locus_tag=b0551 NC_000913.3 RefSeq CDS 573956 574339 . + 0 ID=cds543;Parent=gene559;Dbxref=ASAP:ABE-0001883,UniProtKB/Swiss-Prot:Q47274,Genbank:NP_415083.1,EcoGene:EG13633,GeneID:945177;Name=NP_415083.1;gbkey=CDS;gene=quuD;product=DLP12 prophage%3B putative antitermination protein;protein_id=NP_415083.1;transl_table=11 NC_000913.3 RefSeq gene 575786 576825 . - . ID=gene560;Dbxref=EcoGene:EG10659,GeneID:946786;Name=nmpC;gbkey=Gene;gene=nmpC;gene_biotype=pseudogene;gene_synonym=ECK0544,JW5078,phmA;locus_tag=b0553;part=1/2;pseudo=true NC_000913.3 RefSeq gene 574529 574586 . - . ID=gene560;Dbxref=EcoGene:EG10659,GeneID:946786;Name=nmpC;gbkey=Gene;gene=nmpC;gene_biotype=pseudogene;gene_synonym=ECK0544,JW5078,phmA;locus_tag=b0553;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 575786 576825 . - 0 ID=cds544;Parent=gene560;Dbxref=ASAP:ABE-0001888,UniProtKB/Swiss-Prot:P21420,EcoGene:EG10659,GeneID:946786;Note=DLP12 prophage%3B truncated outer membrane porin (pseudogene)%3BIS%2C phage%2C Tn%3B Phage or Prophage Related~outer membrane porin protein%3B locus of qsr prophage;gbkey=CDS;gene=nmpC;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 574529 574586 . - 1 ID=cds544;Parent=gene560;Dbxref=ASAP:ABE-0001888,UniProtKB/Swiss-Prot:P21420,EcoGene:EG10659,GeneID:946786;Note=DLP12 prophage%3B truncated outer membrane porin (pseudogene)%3BIS%2C phage%2C Tn%3B Phage or Prophage Related~outer membrane porin protein%3B locus of qsr prophage;gbkey=CDS;gene=nmpC;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 574591 575785 . - . ID=id86;gbkey=mobile_element NC_000913.3 RefSeq gene 574737 575753 . - . ID=gene561;Dbxref=EcoGene:EG40008,GeneID:946163;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b0552 NC_000913.3 RefSeq CDS 574737 575753 . - 0 ID=cds545;Parent=gene561;Dbxref=ASAP:ABE-0001886,UniProtKB/Swiss-Prot:P0CE50,Genbank:NP_415084.1,EcoGene:EG40008,GeneID:946163;Name=NP_415084.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_415084.1;transl_table=11 NC_000913.3 RefSeq gene 577398 577613 . + . ID=gene562;Dbxref=EcoGene:EG13634,GeneID:947545;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;gene_synonym=ECK0545,JW0543,ybcR;locus_tag=b0554 NC_000913.3 RefSeq CDS 577398 577613 . + 0 ID=cds546;Parent=gene562;Dbxref=ASAP:ABE-0001895,UniProtKB/Swiss-Prot:P0A9R2,Genbank:NP_415086.1,EcoGene:EG13634,GeneID:947545;Name=NP_415086.1;gbkey=CDS;gene=essD;product=DLP12 prophage%3B putative phage lysis protein;protein_id=NP_415086.1;transl_table=11 NC_000913.3 RefSeq gene 577613 578110 . + . ID=gene563;Dbxref=EcoGene:EG13635,GeneID:947539;Name=rrrD;gbkey=Gene;gene=rrrD;gene_biotype=protein_coding;gene_synonym=arrD,ECK0546,JW0544,ybcS;locus_tag=b0555 NC_000913.3 RefSeq CDS 577613 578110 . + 0 ID=cds547;Parent=gene563;Dbxref=ASAP:ABE-0001898,UniProtKB/Swiss-Prot:P78285,Genbank:NP_415087.1,EcoGene:EG13635,GeneID:947539;Name=NP_415087.1;Note=bacteriophage lambda lysozyme homolog;gbkey=CDS;gene=rrrD;product=DLP12 prophage%3B putative lysozyme;protein_id=NP_415087.1;transl_table=11 NC_000913.3 RefSeq gene 578107 578568 . + . ID=gene564;Dbxref=EcoGene:EG13636,GeneID:945929;Name=rzpD;gbkey=Gene;gene=rzpD;gene_biotype=protein_coding;gene_synonym=ECK0547,JW5079,Rz,ybcT;locus_tag=b0556 NC_000913.3 RefSeq CDS 578107 578568 . + 0 ID=cds548;Parent=gene564;Dbxref=ASAP:ABE-0001900,UniProtKB/Swiss-Prot:P75719,Genbank:NP_415088.1,EcoGene:EG13636,GeneID:945929;Name=NP_415088.1;Note=bacteriophage lambda endopeptidase homolog~completely contained in another CDS;gbkey=CDS;gene=rzpD;product=DLP12 prophage%3B putative murein endopeptidase;protein_id=NP_415088.1;transl_table=11 NC_000913.3 RefSeq gene 578327 578509 . + . ID=gene565;Dbxref=EcoGene:EG14380,GeneID:1450242;Name=rzoD;gbkey=Gene;gene=rzoD;gene_biotype=protein_coding;gene_synonym=ECK0548,JW5080,Rz1;locus_tag=b4510 NC_000913.3 RefSeq CDS 578327 578509 . + 0 ID=cds549;Parent=gene565;Dbxref=ASAP:ABE-0285031,UniProtKB/Swiss-Prot:P58041,Genbank:YP_588440.1,EcoGene:EG14380,GeneID:1450242;Name=YP_588440.1;Note=completely contained in another CDS;gbkey=CDS;gene=rzoD;product=DLP12 prophage%3B putative lipoprotein;protein_id=YP_588440.1;transl_table=11 NC_000913.3 RefSeq gene 578600 578893 . - . ID=gene566;Dbxref=EcoGene:EG13637,GeneID:948980;Name=borD;gbkey=Gene;gene=borD;gene_biotype=protein_coding;gene_synonym=ECK0549,iss,JW0546,ybcU;locus_tag=b0557 NC_000913.3 RefSeq CDS 578600 578893 . - 0 ID=cds550;Parent=gene566;Dbxref=ASAP:ABE-0001902,UniProtKB/Swiss-Prot:P77330,Genbank:NP_415089.1,EcoGene:EG13637,GeneID:948980;Name=NP_415089.1;Note=bacteriophage lambda Bor protein homolog;gbkey=CDS;gene=borD;product=DLP12 prophage%3B putative lipoprotein;protein_id=NP_415089.1;transl_table=11 NC_000913.3 RefSeq gene 579184 579594 . - . ID=gene567;Dbxref=EcoGene:EG13638,GeneID:945178;Name=ybcV;gbkey=Gene;gene=ybcV;gene_biotype=protein_coding;gene_synonym=ECK0550,JW5081;locus_tag=b0558 NC_000913.3 RefSeq CDS 579184 579594 . - 0 ID=cds551;Parent=gene567;Dbxref=ASAP:ABE-0001907,UniProtKB/Swiss-Prot:P77598,Genbank:NP_415090.2,EcoGene:EG13638,GeneID:945178;Name=NP_415090.2;Note=putative an envelop protein;gbkey=CDS;gene=ybcV;product=DLP12 prophage%3B uncharacterized protein;protein_id=NP_415090.2;transl_table=11 NC_000913.3 RefSeq gene 579880 580086 . + . ID=gene568;Dbxref=EcoGene:EG13639,GeneID:945175;Name=ybcW;gbkey=Gene;gene=ybcW;gene_biotype=protein_coding;gene_synonym=ECK0551,JW0548;locus_tag=b0559 NC_000913.3 RefSeq CDS 579880 580086 . + 0 ID=cds552;Parent=gene568;Dbxref=ASAP:ABE-0001912,UniProtKB/Swiss-Prot:P64435,Genbank:NP_415091.1,EcoGene:EG13639,GeneID:945175;Name=NP_415091.1;gbkey=CDS;gene=ybcW;product=DLP12 prophage%3B uncharacterized protein;protein_id=NP_415091.1;transl_table=11 NC_000913.3 RefSeq gene 580251 580445 . - . ID=gene569;Dbxref=EcoGene:EG14444,GeneID:5061499;Name=ylcI;gbkey=Gene;gene=ylcI;gene_biotype=protein_coding;gene_synonym=ECK4399;locus_tag=b4589 NC_000913.3 RefSeq CDS 580251 580445 . - 0 ID=cds553;Parent=gene569;Dbxref=UniProtKB/Swiss-Prot:A5A607,Genbank:YP_001165309.1,EcoGene:EG14444,GeneID:5061499;Name=YP_001165309.1;gbkey=CDS;gene=ylcI;product=DUF3950 family protein%2C DLP12 prophage;protein_id=YP_001165309.1;transl_table=11 NC_000913.3 RefSeq gene 580834 581379 . + . ID=gene570;Dbxref=EcoGene:EG11635,GeneID:945172;Name=nohD;gbkey=Gene;gene=nohD;gene_biotype=protein_coding;gene_synonym=ECK0552,JW0549,nohB;locus_tag=b0560 NC_000913.3 RefSeq CDS 580834 581379 . + 0 ID=cds554;Parent=gene570;Dbxref=ASAP:ABE-0001915,UniProtKB/Swiss-Prot:P31062,Genbank:NP_415092.1,EcoGene:EG11635,GeneID:945172;Name=NP_415092.1;Note=bacteriophage DNA packaging protein;gbkey=CDS;gene=nohD;product=DLP12 prophage%3B DNA packaging protein;protein_id=NP_415092.1;transl_table=11 NC_000913.3 RefSeq gene 581354 581662 . + . ID=gene571;Dbxref=EcoGene:EG14346,GeneID:5625560;Name=aaaD;gbkey=Gene;gene=aaaD;gene_biotype=pseudogene;gene_synonym=ECK4439,ylcF;locus_tag=b4634;pseudo=true NC_000913.3 RefSeq CDS 581354 581662 . + 0 ID=cds555;Parent=gene571;Dbxref=EcoGene:EG14346,GeneID:5625560;Note=pseudogene%3B DLP12 prophage%3B tail fiber assembly protein family%3BPhage or Prophage Related;gbkey=CDS;gene=aaaD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 581660 582097 . + . ID=gene572;Dbxref=EcoGene:EG13640,GeneID:945171;Name=tfaD;gbkey=Gene;gene=tfaD;gene_biotype=pseudogene;gene_synonym=ECK0553,JW5815,ybcX;locus_tag=b0561;pseudo=true NC_000913.3 RefSeq CDS 581660 582097 . + 0 ID=cds556;Parent=gene572;Dbxref=ASAP:ABE-0001917,UniProtKB/Swiss-Prot:P77699,EcoGene:EG13640,GeneID:945171;Note=pseudogene%2C DLP12 prophage%3B tail fiber assembly protein family%3BPhage or Prophage Related;gbkey=CDS;gene=tfaD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 582152 582806 . - . ID=gene573;Dbxref=EcoGene:EG13641,GeneID:945170;Name=ybcY;gbkey=Gene;gene=ybcY;gene_biotype=pseudogene;gene_synonym=ECK0554,JW0551;locus_tag=b0562;pseudo=true NC_000913.3 RefSeq CDS 582803 582806 . - 0 ID=cds557;Parent=gene573;Dbxref=ASAP:ABE-0001919,UniProtKB/Swiss-Prot:P77460,EcoGene:EG13641,GeneID:945170;Note=pseudogene%2C DLP12 prophage%3B methyltransferase homology%3BPhage or Prophage Related;gbkey=CDS;gene=ybcY;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 582152 582804 . - 2 ID=cds557;Parent=gene573;Dbxref=ASAP:ABE-0001919,UniProtKB/Swiss-Prot:P77460,EcoGene:EG13641,GeneID:945170;Note=pseudogene%2C DLP12 prophage%3B methyltransferase homology%3BPhage or Prophage Related;gbkey=CDS;gene=ybcY;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 582953 583135 . + . ID=gene574;Dbxref=EcoGene:EG14317,GeneID:945183;Name=tfaX;gbkey=Gene;gene=tfaX;gene_biotype=pseudogene;gene_synonym=ECK0555,JW0552,ylcE;locus_tag=b0563;pseudo=true NC_000913.3 RefSeq CDS 582953 583135 . + 0 ID=cds558;Parent=gene574;Dbxref=ASAP:ABE-0001926,UniProtKB/Swiss-Prot:P77087,EcoGene:EG14317,GeneID:945183;Note=pseudogene%2C DLP12 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=tfaX;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 583681 584430 . + . ID=gene575;Dbxref=EcoGene:EG10050,GeneID:948797;Name=appY;gbkey=Gene;gene=appY;gene_biotype=protein_coding;gene_synonym=ECK0556,JW0553;locus_tag=b0564 NC_000913.3 RefSeq CDS 583681 584430 . + 0 ID=cds559;Parent=gene575;Dbxref=ASAP:ABE-0001929,UniProtKB/Swiss-Prot:P05052,Genbank:NP_415096.1,EcoGene:EG10050,GeneID:948797;Name=NP_415096.1;Note=regulatory protein affecting appA and other genes;gbkey=CDS;gene=appY;product=global transcriptional activator%3B DLP12 prophage;protein_id=NP_415096.1;transl_table=11 NC_000913.3 RefSeq gene 584680 585633 . - . ID=gene576;Dbxref=EcoGene:EG10673,GeneID:945185;Name=ompT;gbkey=Gene;gene=ompT;gene_biotype=protein_coding;gene_synonym=ECK0557,JW0554;locus_tag=b0565 NC_000913.3 RefSeq CDS 584680 585633 . - 0 ID=cds560;Parent=gene576;Dbxref=ASAP:ABE-0001931,UniProtKB/Swiss-Prot:P09169,Genbank:NP_415097.1,EcoGene:EG10673,GeneID:945185;Name=NP_415097.1;Note=outer membrane protein 3b (a)%2C protease VII;gbkey=CDS;gene=ompT;product=DLP12 prophage%3B outer membrane protease VII%3B outer membrane protein 3b;protein_id=NP_415097.1;transl_table=11 NC_000913.3 RefSeq gene 586057 586101 . + . ID=gene577;Dbxref=EcoGene:EG31172,GeneID:5625561;Name=pauD;gbkey=Gene;gene=pauD;gene_biotype=tRNA_pseudogene;gene_synonym=ECK4463;locus_tag=b4635;pseudo=true NC_000913.3 RefSeq tRNA 586057 586101 . + . ID=rna16;Parent=gene577;Dbxref=EcoGene:EG31172,GeneID:5625561;gbkey=tRNA;gene=pauD;product=tRNA-OTHER;pseudo=true NC_000913.3 RefSeq exon 586057 586101 . + . ID=id87;Parent=rna16;Dbxref=EcoGene:EG31172,GeneID:5625561;gbkey=tRNA;gene=pauD;product=tRNA-OTHER;pseudo=true NC_000913.3 RefSeq gene 586147 586908 . - . ID=gene578;Dbxref=EcoGene:EG10268,GeneID:949114;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;gene_synonym=ECK0558,JW0555;locus_tag=b0566 NC_000913.3 RefSeq CDS 586147 586908 . - 0 ID=cds561;Parent=gene578;Dbxref=ASAP:ABE-0001935,UniProtKB/Swiss-Prot:P10805,Genbank:NP_415098.1,EcoGene:EG10268,GeneID:949114;Name=NP_415098.1;Note=envelope protein%3B thermoregulation of porin biosynthesis;gbkey=CDS;gene=envY;product=porin thermoregulatory transcriptional activator;protein_id=NP_415098.1;transl_table=11 NC_000913.3 RefSeq gene 587091 587981 . - . ID=gene579;Dbxref=EcoGene:EG12448,GeneID:945186;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;gene_synonym=ECK0559,JW0556;locus_tag=b0567 NC_000913.3 RefSeq CDS 587091 587981 . - 0 ID=cds562;Parent=gene579;Dbxref=ASAP:ABE-0001937,UniProtKB/Swiss-Prot:P37325,Genbank:NP_415099.1,EcoGene:EG12448,GeneID:945186;Name=NP_415099.1;gbkey=CDS;gene=ybcH;product=PRK09936 family protein;protein_id=NP_415099.1;transl_table=11 NC_000913.3 RefSeq gene 587982 590954 . - . ID=gene580;Dbxref=EcoGene:EG11740,GeneID:944741;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;gene_synonym=ECK0560,JW0557;locus_tag=b0568 NC_000913.3 RefSeq CDS 587982 590954 . - 0 ID=cds563;Parent=gene580;Dbxref=ASAP:ABE-0001939,UniProtKB/Swiss-Prot:P31600,Genbank:NP_415100.1,EcoGene:EG11740,GeneID:944741;Name=NP_415100.1;Note=bacteriophage N4 receptor%2C outer membrane protein;gbkey=CDS;gene=nfrA;product=bacteriophage N4 receptor%2C outer membrane subunit;protein_id=NP_415100.1;transl_table=11 NC_000913.3 RefSeq gene 590941 593178 . - . ID=gene581;Dbxref=EcoGene:EG11739,GeneID:945849;Name=nfrB;gbkey=Gene;gene=nfrB;gene_biotype=protein_coding;gene_synonym=ECK0561,JW0558;locus_tag=b0569 NC_000913.3 RefSeq CDS 590941 593178 . - 0 ID=cds564;Parent=gene581;Dbxref=ASAP:ABE-0001942,UniProtKB/Swiss-Prot:P0AFA5,Genbank:NP_415101.1,EcoGene:EG11739,GeneID:945849;Name=NP_415101.1;Note=bacteriophage N4 receptor%2C subunit%2C inner membrane protein;gbkey=CDS;gene=nfrB;product=bacteriophage N4 receptor%2C inner membrane subunit;protein_id=NP_415101.1;transl_table=11 NC_000913.3 RefSeq gene 593328 594770 . - . ID=gene582;Dbxref=EcoGene:EG13642,GeneID:945978;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;gene_synonym=ECK0562,JW5082,silS,ybcZ;locus_tag=b0570 NC_000913.3 RefSeq CDS 593328 594770 . - 0 ID=cds565;Parent=gene582;Dbxref=ASAP:ABE-0001946,UniProtKB/Swiss-Prot:P77485,Genbank:NP_415102.1,EcoGene:EG13642,GeneID:945978;Name=NP_415102.1;gbkey=CDS;gene=cusS;product=copper-sensing histidine kinase in two-component regulatory system with CusR;protein_id=NP_415102.1;transl_table=11 NC_000913.3 RefSeq gene 594760 595443 . - . ID=gene583;Dbxref=EcoGene:EG13851,GeneID:945003;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;gene_synonym=ECK0563,JW0560,silR,ylcA;locus_tag=b0571 NC_000913.3 RefSeq CDS 594760 595443 . - 0 ID=cds566;Parent=gene583;Dbxref=ASAP:ABE-0001948,UniProtKB/Swiss-Prot:P0ACZ8,Genbank:NP_415103.1,EcoGene:EG13851,GeneID:945003;Name=NP_415103.1;gbkey=CDS;gene=cusR;product=response regulator in two-component regulatory system with CusS;protein_id=NP_415103.1;transl_table=11 NC_000913.3 RefSeq gene 595600 596973 . + . ID=gene584;Dbxref=EcoGene:EG14233,GeneID:946288;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;gene_synonym=ECK0564,ibeB,JW0561,silC,ylcB;locus_tag=b0572 NC_000913.3 RefSeq CDS 595600 596973 . + 0 ID=cds567;Parent=gene584;Dbxref=ASAP:ABE-0001958,UniProtKB/Swiss-Prot:P77211,Genbank:NP_415104.1,EcoGene:EG14233,GeneID:946288;Name=NP_415104.1;gbkey=CDS;gene=cusC;product=copper/silver efflux system%2C outer membrane component;protein_id=NP_415104.1;transl_table=11 NC_000913.3 RefSeq gene 597131 597463 . + . ID=gene585;Dbxref=EcoGene:EG14234,GeneID:945188;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;gene_synonym=cusX,ECK0565,JW0562,silF,ylcC;locus_tag=b0573 NC_000913.3 RefSeq CDS 597131 597463 . + 0 ID=cds568;Parent=gene585;Dbxref=ASAP:ABE-0001967,UniProtKB/Swiss-Prot:P77214,Genbank:NP_415105.1,EcoGene:EG14234,GeneID:945188;Name=NP_415105.1;gbkey=CDS;gene=cusF;product=periplasmic copper- and silver-binding protein;protein_id=NP_415105.1;transl_table=11 NC_000913.3 RefSeq gene 597479 598702 . + . ID=gene586;Dbxref=EcoGene:EG14235,GeneID:945189;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;gene_synonym=ECK0566,JW0563,silB,ylcD;locus_tag=b0574 NC_000913.3 RefSeq CDS 597479 598702 . + 0 ID=cds569;Parent=gene586;Dbxref=ASAP:ABE-0001969,UniProtKB/Swiss-Prot:P77239,Genbank:NP_415106.1,EcoGene:EG14235,GeneID:945189;Name=NP_415106.1;gbkey=CDS;gene=cusB;product=copper/silver efflux system%2C membrane fusion protein;protein_id=NP_415106.1;transl_table=11 NC_000913.3 RefSeq gene 598714 601857 . + . ID=gene587;Dbxref=EcoGene:EG12367,GeneID:945191;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;gene_synonym=ECK0567,JW0564,silA,ybdE;locus_tag=b0575 NC_000913.3 RefSeq CDS 598714 601857 . + 0 ID=cds570;Parent=gene587;Dbxref=ASAP:ABE-0001971,UniProtKB/Swiss-Prot:P38054,Genbank:NP_415107.1,EcoGene:EG12367,GeneID:945191;Name=NP_415107.1;gbkey=CDS;gene=cusA;product=copper/silver efflux system%2C membrane component;protein_id=NP_415107.1;transl_table=11 NC_000913.3 RefSeq gene 601959 603335 . + . ID=gene588;Dbxref=EcoGene:EG10708,GeneID:945199;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;gene_synonym=ECK0568,JW0565;locus_tag=b0576 NC_000913.3 RefSeq CDS 601959 603335 . + 0 ID=cds571;Parent=gene588;Dbxref=ASAP:ABE-0001976,UniProtKB/Swiss-Prot:P24207,Genbank:NP_415108.1,EcoGene:EG10708,GeneID:945199;Name=NP_415108.1;Note=phenylalanine-specific transport system;gbkey=CDS;gene=pheP;product=phenylalanine transporter;protein_id=NP_415108.1;transl_table=11 NC_000913.3 RefSeq gene 603416 604663 . - . ID=gene589;Dbxref=EcoGene:EG12620,GeneID:946243;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;gene_synonym=ECK0569,JW0566,mscM;locus_tag=b0577 NC_000913.3 RefSeq CDS 603416 604663 . - 0 ID=cds572;Parent=gene589;Dbxref=ASAP:ABE-0001978,UniProtKB/Swiss-Prot:P0AAT4,Genbank:NP_415109.1,EcoGene:EG12620,GeneID:946243;Name=NP_415109.1;Note=putative transport;gbkey=CDS;gene=ybdG;product=mechanosensitive channel protein%2C miniconductance;protein_id=NP_415109.1;transl_table=11 NC_000913.3 RefSeq gene 604771 605424 . - . ID=gene590;Dbxref=EcoGene:EG20151,GeneID:945778;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;gene_synonym=dprA,ECK0570,JW0567,nfnB,nfsI,ntr;locus_tag=b0578 NC_000913.3 RefSeq CDS 604771 605424 . - 0 ID=cds573;Parent=gene590;Dbxref=ASAP:ABE-0001981,UniProtKB/Swiss-Prot:P38489,Genbank:NP_415110.1,EcoGene:EG20151,GeneID:945778;Name=NP_415110.1;Note=oxygen-insensitive NAD(P)H nitroreductase;gbkey=CDS;gene=nfsB;product=dihydropteridine reductase%2C NAD(P)H-dependent%2C oxygen-insensitive;protein_id=NP_415110.1;transl_table=11 NC_000913.3 RefSeq gene 605518 605886 . - . ID=gene591;Dbxref=EcoGene:EG12619,GeneID:948302;Name=ybdF;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;gene_synonym=ECK0571,JW5083;locus_tag=b0579 NC_000913.3 RefSeq CDS 605518 605886 . - 0 ID=cds574;Parent=gene591;Dbxref=ASAP:ABE-0001986,UniProtKB/Swiss-Prot:P0AAT2,Genbank:NP_415111.1,EcoGene:EG12619,GeneID:948302;Name=NP_415111.1;gbkey=CDS;gene=ybdF;product=DUF419 family protein;protein_id=NP_415111.1;transl_table=11 NC_000913.3 RefSeq gene 605951 606199 . - . ID=gene592;Dbxref=EcoGene:EG13643,GeneID:947183;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;gene_synonym=ECK0572,JW0569;locus_tag=b0580 NC_000913.3 RefSeq CDS 605951 606199 . - 0 ID=cds575;Parent=gene592;Dbxref=ASAP:ABE-0001988,UniProtKB/Swiss-Prot:P77506,Genbank:NP_415112.1,EcoGene:EG13643,GeneID:947183;Name=NP_415112.1;gbkey=CDS;gene=ybdJ;product=DUF1158 family putative inner membrane protein;protein_id=NP_415112.1;transl_table=11 NC_000913.3 RefSeq gene 606265 607383 . - . ID=gene593;Dbxref=EcoGene:EG13644,GeneID:947246;Name=ybdK;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;gene_synonym=ECK0573,JW0570;locus_tag=b0581 NC_000913.3 RefSeq CDS 606265 607383 . - 0 ID=cds576;Parent=gene593;Dbxref=ASAP:ABE-0001992,UniProtKB/Swiss-Prot:P77213,Genbank:NP_415113.1,EcoGene:EG13644,GeneID:947246;Name=NP_415113.1;gbkey=CDS;gene=ybdK;product=weak gamma-glutamyl:cysteine ligase;protein_id=NP_415113.1;transl_table=11 NC_000913.3 RefSeq gene 607734 607792 . + . ID=gene594;Dbxref=EcoGene:EG31186,GeneID:8764969;Name=sokE;gbkey=Gene;gene=sokE;gene_biotype=antisense_RNA;gene_synonym=ECK4512;locus_tag=b4700 NC_000913.3 RefSeq ncRNA 607734 607792 . + . ID=rna17;Parent=gene594;Dbxref=EcoGene:EG31186,GeneID:8764969;gbkey=ncRNA;gene=sokE;ncrna_class=antisense_RNA;product=sRNA at remnant mokE/hokE locus NC_000913.3 RefSeq exon 607734 607792 . + . ID=id88;Parent=rna17;Dbxref=EcoGene:EG31186,GeneID:8764969;gbkey=ncRNA;gene=sokE;ncrna_class=antisense_RNA;product=sRNA at remnant mokE/hokE locus NC_000913.3 RefSeq gene 607836 607988 . + . ID=gene595;Dbxref=EcoGene:EG14302,GeneID:2847715;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;gene_synonym=ECK0574,JW5084,ybdY;locus_tag=b4415 NC_000913.3 RefSeq CDS 607836 607988 . + 0 ID=cds577;Parent=gene595;Dbxref=ASAP:ABE-0047279,UniProtKB/Swiss-Prot:P77091,Genbank:YP_025295.1,EcoGene:EG14302,GeneID:2847715;Name=YP_025295.1;Note=small toxic membrane polypeptide~the corresponding mokE lacks a start codon%2C and the regulatory RNA sokE has not been identified;gbkey=CDS;gene=hokE;product=toxic polypeptide%2C small;protein_id=YP_025295.1;transl_table=11 NC_000913.3 RefSeq region 608007 609351 . + . ID=id89;gbkey=mobile_element NC_000913.3 RefSeq gene 608065 609177 . + . ID=gene596;Dbxref=EcoGene:EG40012,GeneID:945200;Name=insL1;gbkey=Gene;gene=insL1;gene_biotype=protein_coding;gene_synonym=ECK0016;locus_tag=b0582 NC_000913.3 RefSeq CDS 608065 609177 . + 0 ID=cds578;Parent=gene596;Dbxref=ASAP:ABE-0002007,UniProtKB/Swiss-Prot:P0CF92,Genbank:NP_415114.1,EcoGene:EG40012,GeneID:945200;Name=NP_415114.1;gbkey=CDS;gene=insL1;product=IS186 transposase;protein_id=NP_415114.1;transl_table=11 NC_000913.3 RefSeq gene 609459 610079 . - . ID=gene597;Dbxref=EcoGene:EG10262,GeneID:945194;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;gene_synonym=ECK0575,JW5085;locus_tag=b0583 NC_000913.3 RefSeq CDS 609459 610079 . - 0 ID=cds579;Parent=gene597;Dbxref=ASAP:ABE-0002009,UniProtKB/Swiss-Prot:P19925,Genbank:NP_415115.2,EcoGene:EG10262,GeneID:945194;Name=NP_415115.2;Note=enterochelin synthetase%2C component D;gbkey=CDS;gene=entD;product=phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex;protein_id=NP_415115.2;transl_table=11 NC_000913.3 RefSeq repeat_region 610117 610214 . + . ID=id90;Note=RIP54 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 610254 612494 . - . ID=gene598;Dbxref=EcoGene:EG10293,GeneID:945193;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;gene_synonym=cbr,cbt,ECK0576,fep,feuB,JW5086;locus_tag=b0584 NC_000913.3 RefSeq CDS 610254 612494 . - 0 ID=cds580;Parent=gene598;Dbxref=ASAP:ABE-0002014,UniProtKB/Swiss-Prot:P05825,Genbank:NP_415116.1,EcoGene:EG10293,GeneID:945193;Name=NP_415116.1;Note=outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D;gbkey=CDS;gene=fepA;product=ferrienterobactin outer membrane transporter;protein_id=NP_415116.1;transl_table=11 NC_000913.3 RefSeq gene 612737 613939 . + . ID=gene599;Dbxref=EcoGene:EG10299,GeneID:945181;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;gene_synonym=ECK0577,JW0576;locus_tag=b0585 NC_000913.3 RefSeq CDS 612737 613939 . + 0 ID=cds581;Parent=gene599;Dbxref=ASAP:ABE-0002019,UniProtKB/Swiss-Prot:P13039,Genbank:NP_415117.2,EcoGene:EG10299,GeneID:945181;Name=NP_415117.2;Note=enterochelin esterase;gbkey=CDS;gene=fes;product=enterobactin/ferrienterobactin esterase;protein_id=NP_415117.2;transl_table=11 NC_000913.3 RefSeq gene 613942 614160 . + . ID=gene600;Dbxref=EcoGene:EG14353,GeneID:1450243;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;gene_synonym=ECK0578,JW0577,mbtH;locus_tag=b4511 NC_000913.3 RefSeq CDS 613942 614160 . + 0 ID=cds582;Parent=gene600;Dbxref=ASAP:ABE-0285032,UniProtKB/Swiss-Prot:P18393,Genbank:YP_588441.1,EcoGene:EG14353,GeneID:1450243;Name=YP_588441.1;gbkey=CDS;gene=ybdZ;product=stimulator of EntF adenylation activity%2C MbtH-like;protein_id=YP_588441.1;transl_table=11 NC_000913.3 RefSeq gene 614157 618038 . + . ID=gene601;Dbxref=EcoGene:EG10264,GeneID:945184;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;gene_synonym=ECK0579,JW0578;locus_tag=b0586 NC_000913.3 RefSeq CDS 614157 618038 . + 0 ID=cds583;Parent=gene601;Dbxref=ASAP:ABE-0002021,UniProtKB/Swiss-Prot:P11454,Genbank:NP_415118.1,EcoGene:EG10264,GeneID:945184;Name=NP_415118.1;Note=ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F);gbkey=CDS;gene=entF;product=enterobactin synthase multienzyme complex component%2C ATP-dependent;protein_id=NP_415118.1;transl_table=11 NC_000913.3 RefSeq gene 618254 619387 . + . ID=gene602;Dbxref=EcoGene:EG10297,GeneID:945180;Name=fepE;gbkey=Gene;gene=fepE;gene_biotype=protein_coding;gene_synonym=ECK0580,JW0579;locus_tag=b0587 NC_000913.3 RefSeq CDS 618254 619387 . + 0 ID=cds584;Parent=gene602;Dbxref=ASAP:ABE-0002023,UniProtKB/Swiss-Prot:P26266,Genbank:NP_415119.1,EcoGene:EG10297,GeneID:945180;Name=NP_415119.1;Note=ferric enterobactin (enterochelin) transport;gbkey=CDS;gene=fepE;product=regulator of length of O-antigen component of lipopolysaccharide chains;protein_id=NP_415119.1;transl_table=11 NC_000913.3 RefSeq gene 619384 620199 . - . ID=gene603;Dbxref=EcoGene:EG10295,GeneID:945201;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;gene_synonym=ECK0581,JW0580;locus_tag=b0588 NC_000913.3 RefSeq CDS 619384 620199 . - 0 ID=cds585;Parent=gene603;Dbxref=ASAP:ABE-0002025,UniProtKB/Swiss-Prot:P23878,Genbank:NP_415120.1,EcoGene:EG10295,GeneID:945201;Name=NP_415120.1;Note=ATP-binding component of ferric enterobactin transport;gbkey=CDS;gene=fepC;product=ferrienterobactin ABC transporter ATPase;protein_id=NP_415120.1;transl_table=11 NC_000913.3 RefSeq gene 620196 621188 . - . ID=gene604;Dbxref=EcoGene:EG10298,GeneID:945209;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;gene_synonym=ECK0582,JW0581;locus_tag=b0589 NC_000913.3 RefSeq CDS 620196 621188 . - 0 ID=cds586;Parent=gene604;Dbxref=ASAP:ABE-0002027,UniProtKB/Swiss-Prot:P23877,Genbank:NP_415121.1,EcoGene:EG10298,GeneID:945209;Name=NP_415121.1;Note=ferric enterobactin transport protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=fepG;product=iron-enterobactin ABC transporter permease;protein_id=NP_415121.1;transl_table=11 NC_000913.3 RefSeq gene 621185 622189 . - . ID=gene605;Dbxref=EcoGene:EG10296,GeneID:945214;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;gene_synonym=ECK0583,JW0582;locus_tag=b0590 NC_000913.3 RefSeq CDS 621185 622189 . - 0 ID=cds587;Parent=gene605;Dbxref=ASAP:ABE-0002031,UniProtKB/Swiss-Prot:P23876,Genbank:NP_415122.1,EcoGene:EG10296,GeneID:945214;Name=NP_415122.1;Note=ferric enterobactin (enterochelin) transport%3B membrane component of ABC superfamily;gbkey=CDS;gene=fepD;product=ferrienterobactin ABC transporter permease;protein_id=NP_415122.1;transl_table=11 NC_000913.3 RefSeq gene 622300 623550 . + . ID=gene606;Dbxref=EcoGene:EG11104,GeneID:946268;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;gene_synonym=ECK0584,JW0583,ybdA;locus_tag=b0591 NC_000913.3 RefSeq CDS 622300 623550 . + 0 ID=cds588;Parent=gene606;Dbxref=ASAP:ABE-0002036,UniProtKB/Swiss-Prot:P24077,Genbank:NP_415123.1,EcoGene:EG11104,GeneID:946268;Name=NP_415123.1;Note=putative transport;gbkey=CDS;gene=entS;product=enterobactin exporter%2C iron-regulated;protein_id=NP_415123.1;transl_table=11 NC_000913.3 RefSeq gene 623554 624510 . - . ID=gene607;Dbxref=EcoGene:EG10294,GeneID:947538;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;gene_synonym=ECK0585,JW0584;locus_tag=b0592 NC_000913.3 RefSeq CDS 623554 624510 . - 0 ID=cds589;Parent=gene607;Dbxref=ASAP:ABE-0002038,UniProtKB/Swiss-Prot:P0AEL6,Genbank:NP_415124.1,EcoGene:EG10294,GeneID:947538;Name=NP_415124.1;Note=ferric enterobactin (enterochelin) binding protein%3B periplasmic component%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=fepB;product=ferrienterobactin ABC transporter periplasmic binding protein;protein_id=NP_415124.1;transl_table=11 NC_000913.3 RefSeq gene 624885 626060 . + . ID=gene608;Dbxref=EcoGene:EG10261,GeneID:945511;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;gene_synonym=ECK0586,fepF,JW0585;locus_tag=b0593 NC_000913.3 RefSeq CDS 624885 626060 . + 0 ID=cds590;Parent=gene608;Dbxref=ASAP:ABE-0002047,UniProtKB/Swiss-Prot:P0AEJ2,Genbank:NP_415125.1,EcoGene:EG10261,GeneID:945511;Name=NP_415125.1;Note=isochorismate hydroxymutase 2%2C enterochelin biosynthesis;gbkey=CDS;gene=entC;product=isochorismate synthase 1;protein_id=NP_415125.1;transl_table=11 NC_000913.3 RefSeq gene 626070 627680 . + . ID=gene609;Dbxref=EcoGene:EG10263,GeneID:947426;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;gene_synonym=ECK0587,JW0586;locus_tag=b0594 NC_000913.3 RefSeq CDS 626070 627680 . + 0 ID=cds591;Parent=gene609;Dbxref=ASAP:ABE-0002049,UniProtKB/Swiss-Prot:P10378,Genbank:NP_415126.1,EcoGene:EG10263,GeneID:947426;Name=NP_415126.1;Note=2%2C3-dihydroxybenzoate-AMP ligase;gbkey=CDS;gene=entE;product=2%2C3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex;protein_id=NP_415126.1;transl_table=11 NC_000913.3 RefSeq gene 627694 628551 . + . ID=gene610;Dbxref=EcoGene:EG10260,GeneID:946178;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;gene_synonym=ECK0588,entG,JW0587;locus_tag=b0595 NC_000913.3 RefSeq CDS 627694 628551 . + 0 ID=cds592;Parent=gene610;Dbxref=ASAP:ABE-0002052,UniProtKB/Swiss-Prot:P0ADI4,Genbank:NP_415127.1,EcoGene:EG10260,GeneID:946178;Name=NP_415127.1;Note=2%2C3-dihydro-2%2C3-dihydroxybenzoate synthetase%2C isochroismatase;gbkey=CDS;gene=entB;product=isochorismatase;protein_id=NP_415127.1;transl_table=11 NC_000913.3 RefSeq gene 628551 629297 . + . ID=gene611;Dbxref=EcoGene:EG10259,GeneID:945284;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;gene_synonym=ECK0589,JW0588;locus_tag=b0596 NC_000913.3 RefSeq CDS 628551 629297 . + 0 ID=cds593;Parent=gene611;Dbxref=ASAP:ABE-0002054,UniProtKB/Swiss-Prot:P15047,Genbank:NP_415128.1,EcoGene:EG10259,GeneID:945284;Name=NP_415128.1;Note=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase%2C enterochelin biosynthesis;gbkey=CDS;gene=entA;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=NP_415128.1;transl_table=11 NC_000913.3 RefSeq gene 629300 629713 . + . ID=gene612;Dbxref=EcoGene:EG11105,GeneID:945215;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;gene_synonym=ECK0590,JW0589,ybdB;locus_tag=b0597 NC_000913.3 RefSeq CDS 629300 629713 . + 0 ID=cds594;Parent=gene612;Dbxref=ASAP:ABE-0002057,UniProtKB/Swiss-Prot:P0A8Y8,Genbank:NP_415129.1,EcoGene:EG11105,GeneID:945215;Name=NP_415129.1;gbkey=CDS;gene=entH;product=enterobactin synthesis proofreading thioesterase;protein_id=NP_415129.1;transl_table=11 NC_000913.3 RefSeq gene 629894 631999 . + . ID=gene613;Dbxref=EcoGene:EG10167,GeneID:945213;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;gene_synonym=dppG?,ECK0591,JW0590,ybdC;locus_tag=b0598 NC_000913.3 RefSeq CDS 629894 631999 . + 0 ID=cds595;Parent=gene613;Dbxref=ASAP:ABE-0002061,UniProtKB/Swiss-Prot:P15078,Genbank:NP_415130.1,EcoGene:EG10167,GeneID:945213;Name=NP_415130.1;gbkey=CDS;gene=cstA;product=carbon starvation protein involved in peptide utilization%3B APC peptide transporter family protein;protein_id=NP_415130.1;transl_table=11 NC_000913.3 RefSeq repeat_region 632115 632148 . + . ID=id91;Note=REP55 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 632182 632379 . + . ID=gene614;Dbxref=EcoGene:EG11107,GeneID:949021;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;gene_synonym=ECK0592,JW0591;locus_tag=b4512 NC_000913.3 RefSeq CDS 632182 632379 . + 0 ID=cds596;Parent=gene614;Dbxref=ASAP:ABE-0285033,UniProtKB/Swiss-Prot:P0AAS9,Genbank:YP_588442.1,EcoGene:EG11107,GeneID:949021;Name=YP_588442.1;gbkey=CDS;gene=ybdD;product=DUF466 family protein;protein_id=YP_588442.1;transl_table=11 NC_000913.3 RefSeq gene 632389 633477 . - . ID=gene615;Dbxref=EcoGene:EG12692,GeneID:945212;Name=ybdH;gbkey=Gene;gene=ybdH;gene_biotype=protein_coding;gene_synonym=ECK0593,JW0592;locus_tag=b0599 NC_000913.3 RefSeq CDS 632389 633477 . - 0 ID=cds597;Parent=gene615;Dbxref=ASAP:ABE-0002065,UniProtKB/Swiss-Prot:P45579,Genbank:NP_415132.1,EcoGene:EG12692,GeneID:945212;Name=NP_415132.1;Note=putative oxidoreductase;gbkey=CDS;gene=ybdH;product=putative oxidoreductase;protein_id=NP_415132.1;transl_table=11 NC_000913.3 RefSeq gene 633586 634746 . + . ID=gene616;Dbxref=EcoGene:EG13531,GeneID:945211;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;gene_synonym=ECK0594,JW0593;locus_tag=b0600 NC_000913.3 RefSeq CDS 633586 634746 . + 0 ID=cds598;Parent=gene616;Dbxref=ASAP:ABE-0002069,UniProtKB/Swiss-Prot:P77806,Genbank:NP_415133.1,EcoGene:EG13531,GeneID:945211;Name=NP_415133.1;Note=PLP-dependent methionine aminotransferase;gbkey=CDS;gene=ybdL;product=methionine aminotransferase%2C PLP-dependent;protein_id=NP_415133.1;transl_table=11 NC_000913.3 RefSeq gene 634747 635376 . - . ID=gene617;Dbxref=EcoGene:EG13532,GeneID:945206;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;gene_synonym=ECK0595,JW0594;locus_tag=b0601 NC_000913.3 RefSeq CDS 634747 635376 . - 0 ID=cds599;Parent=gene617;Dbxref=ASAP:ABE-0002071,UniProtKB/Swiss-Prot:P77174,Genbank:NP_415134.1,EcoGene:EG13532,GeneID:945206;Name=NP_415134.1;gbkey=CDS;gene=ybdM;product=Spo0J family protein%2C ParB-like nuclease domain;protein_id=NP_415134.1;transl_table=11 NC_000913.3 RefSeq gene 635349 636569 . - . ID=gene618;Dbxref=EcoGene:EG13533,GeneID:945205;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;gene_synonym=ECK0596,JW0595;locus_tag=b0602 NC_000913.3 RefSeq CDS 635349 636569 . - 0 ID=cds600;Parent=gene618;Dbxref=ASAP:ABE-0002073,UniProtKB/Swiss-Prot:P77216,Genbank:NP_415135.1,EcoGene:EG13533,GeneID:945205;Name=NP_415135.1;gbkey=CDS;gene=ybdN;product=PAPS reductase-like domain protein;protein_id=NP_415135.1;transl_table=11 NC_000913.3 RefSeq gene 636716 637618 . - . ID=gene619;Dbxref=EcoGene:EG13534,GeneID:945216;Name=ybdO;gbkey=Gene;gene=ybdO;gene_biotype=protein_coding;gene_synonym=ECK0597,JW0596;locus_tag=b0603 NC_000913.3 RefSeq CDS 636716 637618 . - 0 ID=cds601;Parent=gene619;Dbxref=ASAP:ABE-0002077,UniProtKB/Swiss-Prot:P77746,Genbank:NP_415136.1,EcoGene:EG13534,GeneID:945216;Name=NP_415136.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ybdO;product=putative DNA-binding transcriptional regulator;protein_id=NP_415136.1;transl_table=11 NC_000913.3 RefSeq gene 637827 638573 . - . ID=gene620;Dbxref=EcoGene:EG13535,GeneID:945224;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;gene_synonym=ECK0598,JW0597,ybdP;locus_tag=b0604 NC_000913.3 RefSeq CDS 637827 638573 . - 0 ID=cds602;Parent=gene620;Dbxref=ASAP:ABE-0002084,UniProtKB/Swiss-Prot:P77202,Genbank:NP_415137.2,EcoGene:EG13535,GeneID:945224;Name=NP_415137.2;Note=thiol:disulfide interchange protein;gbkey=CDS;gene=dsbG;product=thiol:disulfide interchange protein%2C periplasmic;protein_id=NP_415137.2;transl_table=11 NC_000913.3 RefSeq gene 638945 639508 . + . ID=gene621;Dbxref=EcoGene:EG11384,GeneID:945225;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;gene_synonym=ECK0599,JW0598,tpx;locus_tag=b0605 NC_000913.3 RefSeq CDS 638945 639508 . + 0 ID=cds603;Parent=gene621;Dbxref=ASAP:ABE-0002090,UniProtKB/Swiss-Prot:P0AE08,Genbank:NP_415138.1,EcoGene:EG11384,GeneID:945225;Name=NP_415138.1;Note=alkyl hydroperoxide reductase%2C C22 subunit%3B detoxification of hydroperoxides;gbkey=CDS;gene=ahpC;product=alkyl hydroperoxide reductase%2C C22 subunit;protein_id=NP_415138.1;transl_table=11 NC_000913.3 RefSeq gene 639753 641318 . + . ID=gene622;Dbxref=EcoGene:EG11385,GeneID:947540;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;gene_synonym=ECK0600,JW0599;locus_tag=b0606 NC_000913.3 RefSeq CDS 639753 641318 . + 0 ID=cds604;Parent=gene622;Dbxref=ASAP:ABE-0002093,UniProtKB/Swiss-Prot:P35340,Genbank:NP_415139.2,EcoGene:EG11385,GeneID:947540;Name=NP_415139.2;Note=alkyl hydroperoxide reductase%2C F52a subunit%3B detoxification of hydroperoxides;gbkey=CDS;gene=ahpF;product=alkyl hydroperoxide reductase%2C F52a subunit%2C FAD/NAD(P)-binding;protein_id=NP_415139.2;transl_table=11 NC_000913.3 RefSeq gene 641439 641867 . - . ID=gene623;Dbxref=EcoGene:EG12683,GeneID:945229;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;gene_synonym=ECK0601,JW0600,UP12,ybdQ,yzzU;locus_tag=b0607 NC_000913.3 RefSeq CDS 641439 641867 . - 0 ID=cds605;Parent=gene623;Dbxref=ASAP:ABE-0002095,UniProtKB/Swiss-Prot:P39177,Genbank:NP_415140.1,EcoGene:EG12683,GeneID:945229;Name=NP_415140.1;gbkey=CDS;gene=uspG;product=universal stress protein UP12;protein_id=NP_415140.1;transl_table=11 NC_000913.3 RefSeq gene 642088 643326 . + . ID=gene624;Dbxref=EcoGene:EG13537,GeneID:949067;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;gene_synonym=ECK0602,JW0601;locus_tag=b0608 NC_000913.3 RefSeq CDS 642088 643326 . + 0 ID=cds606;Parent=gene624;Dbxref=ASAP:ABE-0002099,UniProtKB/Swiss-Prot:P77316,Genbank:NP_415141.1,EcoGene:EG13537,GeneID:949067;Name=NP_415141.1;Note=putative oxidoreductase;gbkey=CDS;gene=ybdR;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=NP_415141.1;transl_table=11 NC_000913.3 RefSeq gene 643557 643967 . - . ID=gene625;Dbxref=EcoGene:EG12637,GeneID:947546;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;gene_synonym=ECK0603,JW0602;locus_tag=b0610 NC_000913.3 RefSeq CDS 643557 643967 . - 0 ID=cds607;Parent=gene625;Dbxref=ASAP:ABE-0002104,UniProtKB/Swiss-Prot:P0AFW4,Genbank:NP_415143.1,EcoGene:EG12637,GeneID:947546;Name=NP_415143.1;gbkey=CDS;gene=rnk;product=regulator of nucleoside diphosphate kinase;protein_id=NP_415143.1;transl_table=11 NC_000913.3 RefSeq gene 644197 645003 . - . ID=gene626;Dbxref=EcoGene:EG10856,GeneID:949065;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;gene_synonym=ECK0604,JW0603,rnsA;locus_tag=b0611 NC_000913.3 RefSeq CDS 644197 645003 . - 0 ID=cds608;Parent=gene626;Dbxref=ASAP:ABE-0002107,UniProtKB/Swiss-Prot:P21338,Genbank:NP_415144.1,EcoGene:EG10856,GeneID:949065;Name=NP_415144.1;Note=RNase I%2C cleaves phosphodiester bond between any two nucleotides;gbkey=CDS;gene=rna;product=ribonuclease I;protein_id=NP_415144.1;transl_table=11 NC_000913.3 RefSeq gene 645117 646580 . - . ID=gene627;Dbxref=EcoGene:EG13538,GeneID:949070;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;gene_synonym=ECK0605,JW0604,ybdS;locus_tag=b0612 NC_000913.3 RefSeq CDS 645117 646580 . - 0 ID=cds609;Parent=gene627;Dbxref=ASAP:ABE-0002110,UniProtKB/Swiss-Prot:P0AE74,Genbank:NP_415145.1,EcoGene:EG13538,GeneID:949070;Name=NP_415145.1;gbkey=CDS;gene=citT;product=citrate/succinate antiporter%3B citrate carrier;protein_id=NP_415145.1;transl_table=11 NC_000913.3 RefSeq gene 646631 647509 . - . ID=gene628;Dbxref=EcoGene:EG13539,GeneID:946395;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;gene_synonym=ECK0606,JW0605,ybdT;locus_tag=b0613 NC_000913.3 RefSeq CDS 646631 647509 . - 0 ID=cds610;Parent=gene628;Dbxref=ASAP:ABE-0002114,UniProtKB/Swiss-Prot:P77231,Genbank:NP_415146.1,EcoGene:EG13539,GeneID:946395;Name=NP_415146.1;gbkey=CDS;gene=citG;product=2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase;protein_id=NP_415146.1;transl_table=11 NC_000913.3 RefSeq gene 647484 648035 . - . ID=gene629;Dbxref=EcoGene:EG13540,GeneID:949084;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;gene_synonym=ECK0607,JW0606,ybdU;locus_tag=b0614 NC_000913.3 RefSeq CDS 647484 648035 . - 0 ID=cds611;Parent=gene629;Dbxref=ASAP:ABE-0002116,UniProtKB/Swiss-Prot:P0A6G5,Genbank:NP_415147.1,EcoGene:EG13540,GeneID:949084;Name=NP_415147.1;gbkey=CDS;gene=citX;product=apo-citrate lyase phosphoribosyl-dephospho-CoA transferase;protein_id=NP_415147.1;transl_table=11 NC_000913.3 RefSeq gene 648039 649571 . - . ID=gene630;Dbxref=EcoGene:EG13541,GeneID:945230;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;gene_synonym=ECK0608,JW5087,ybdV;locus_tag=b0615 NC_000913.3 RefSeq CDS 648039 649571 . - 0 ID=cds612;Parent=gene630;Dbxref=ASAP:ABE-0002119,UniProtKB/Swiss-Prot:P75726,Genbank:NP_415148.1,EcoGene:EG13541,GeneID:945230;Name=NP_415148.1;Note=citrate lyase alpha chain;gbkey=CDS;gene=citF;product=citrate lyase%2C citrate-ACP transferase (alpha) subunit;protein_id=NP_415148.1;transl_table=11 NC_000913.3 RefSeq gene 649582 650490 . - . ID=gene631;Dbxref=EcoGene:EG13542,GeneID:945406;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;gene_synonym=ECK0609,JW0608,ybdW;locus_tag=b0616 NC_000913.3 RefSeq CDS 649582 650490 . - 0 ID=cds613;Parent=gene631;Dbxref=ASAP:ABE-0002122,UniProtKB/Swiss-Prot:P0A9I1,Genbank:NP_415149.4,EcoGene:EG13542,GeneID:945406;Name=NP_415149.4;gbkey=CDS;gene=citE;product=citrate lyase%2C citryl-ACP lyase (beta) subunit;protein_id=NP_415149.4;transl_table=11 NC_000913.3 RefSeq gene 650487 650783 . - . ID=gene632;Dbxref=EcoGene:EG13543,GeneID:945415;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;gene_synonym=ECK0610,JW0609,ybdX;locus_tag=b0617 NC_000913.3 RefSeq CDS 650487 650783 . - 0 ID=cds614;Parent=gene632;Dbxref=ASAP:ABE-0002124,UniProtKB/Swiss-Prot:P69330,Genbank:NP_415150.1,EcoGene:EG13543,GeneID:945415;Name=NP_415150.1;Note=citrate lyase acyl carrier protein (gamma chain);gbkey=CDS;gene=citD;product=citrate lyase%2C acyl carrier (gamma) subunit;protein_id=NP_415150.1;transl_table=11 NC_000913.3 RefSeq gene 650798 651856 . - . ID=gene633;Dbxref=EcoGene:EG13645,GeneID:945231;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;gene_synonym=ECK0611,JW0610,ybeO;locus_tag=b0618 NC_000913.3 RefSeq CDS 650798 651856 . - 0 ID=cds615;Parent=gene633;Dbxref=ASAP:ABE-0002126,UniProtKB/Swiss-Prot:P77390,Genbank:NP_415151.4,EcoGene:EG13645,GeneID:945231;Name=NP_415151.4;Note=citrate lyase synthetase (citrate (pro-3S)-lyase ligase;gbkey=CDS;gene=citC;product=citrate lyase ligase%3B [citrate [pro-3S]-lyase] ligase;protein_id=NP_415151.4;transl_table=11 NC_000913.3 RefSeq gene 652235 653893 . + . ID=gene634;Dbxref=EcoGene:EG13646,GeneID:945233;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;gene_synonym=criS,dpiB,ECK0612,JW0611,mpdB,ybeP;locus_tag=b0619 NC_000913.3 RefSeq CDS 652235 653893 . + 0 ID=cds616;Parent=gene634;Dbxref=ASAP:ABE-0002129,UniProtKB/Swiss-Prot:P77510,Genbank:NP_415152.1,EcoGene:EG13646,GeneID:945233;Name=NP_415152.1;Note=putative sensor-type protein;gbkey=CDS;gene=citA;product=sensory histidine kinase in two-component regulatory system with CitB;protein_id=NP_415152.1;transl_table=11 NC_000913.3 RefSeq gene 653862 654542 . + . ID=gene635;Dbxref=EcoGene:EG13544,GeneID:947008;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;gene_synonym=criR,dpiA,ECK0613,JW0612,mpdA;locus_tag=b0620 NC_000913.3 RefSeq CDS 653862 654542 . + 0 ID=cds617;Parent=gene635;Dbxref=ASAP:ABE-0002131,UniProtKB/Swiss-Prot:P0AEF4,Genbank:NP_415153.1,EcoGene:EG13544,GeneID:947008;Name=NP_415153.1;Note=sequence similarity to Shigella regulator;gbkey=CDS;gene=citB;product=response regulator in two-component regulatory system with CitA;protein_id=NP_415153.1;transl_table=11 NC_000913.3 RefSeq repeat_region 654552 654574 . + . ID=id92;Note=REP56 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 654583 655968 . - . ID=gene636;Dbxref=EcoGene:EG13545,GeneID:945000;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;gene_synonym=ECK0614,JW0613,JW0616;locus_tag=b0621 NC_000913.3 RefSeq CDS 654583 655968 . - 0 ID=cds618;Parent=gene636;Dbxref=ASAP:ABE-0002133,UniProtKB/Swiss-Prot:P0ABP3,Genbank:NP_415154.1,EcoGene:EG13545,GeneID:945000;Name=NP_415154.1;Note=transport of dicarboxylates;gbkey=CDS;gene=dcuC;product=anaerobic C4-dicarboxylate transport;protein_id=NP_415154.1;transl_table=11 NC_000913.3 RefSeq gene 656557 657117 . + . ID=gene637;Dbxref=EcoGene:EG12180,GeneID:946360;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;gene_synonym=crcA,ECK0615,JW0617,ybeG;locus_tag=b0622 NC_000913.3 RefSeq CDS 656557 657117 . + 0 ID=cds619;Parent=gene637;Dbxref=ASAP:ABE-0002139,UniProtKB/Swiss-Prot:P37001,Genbank:NP_415155.1,EcoGene:EG12180,GeneID:946360;Name=NP_415155.1;gbkey=CDS;gene=pagP;product=phospholipid:lipid A palmitoyltransferase;protein_id=NP_415155.1;transl_table=11 NC_000913.3 RefSeq gene 657292 657501 . + . ID=gene638;Dbxref=EcoGene:EG12179,GeneID:947024;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=ECK0616,gicA,JW0618,msmC;locus_tag=b0623 NC_000913.3 RefSeq CDS 657292 657501 . + 0 ID=cds620;Parent=gene638;Dbxref=ASAP:ABE-0002142,UniProtKB/Swiss-Prot:P0A972,Genbank:NP_415156.1,EcoGene:EG12179,GeneID:947024;Name=NP_415156.1;Note=cold shock protein;gbkey=CDS;gene=cspE;product=constitutive cold shock family transcription antitermination protein%3B negative regulator of cspA transcription%3B RNA melting protein%3B ssDNA-binding protein;protein_id=NP_415156.1;transl_table=11 NC_000913.3 RefSeq gene 657555 657938 . - . ID=gene639;Dbxref=EcoGene:EG12209,GeneID:945798;Name=flc;gbkey=Gene;gene=flc;gene_biotype=protein_coding;gene_synonym=crcB,ECK0617,fluC,JW0619,ybeI;locus_tag=b0624 NC_000913.3 RefSeq CDS 657555 657938 . - 0 ID=cds621;Parent=gene639;Dbxref=ASAP:ABE-0002144,UniProtKB/Swiss-Prot:P37002,Genbank:NP_415157.1,EcoGene:EG12209,GeneID:945798;Name=NP_415157.1;gbkey=CDS;gene=flc;product=fluoride efflux channel%2C dual topology membrane protein;protein_id=NP_415157.1;transl_table=11 NC_000913.3 RefSeq gene 658031 658818 . + . ID=gene640;Dbxref=EcoGene:EG13162,GeneID:4056041;Name=ybeM;gbkey=Gene;gene=ybeM;gene_biotype=pseudogene;gene_synonym=ECK0618,JW0620,ybeH;locus_tag=b4581;pseudo=true NC_000913.3 RefSeq CDS 658031 658225 . + 0 ID=cds622;Parent=gene640;Dbxref=ASAP:ABE-0002148,ASAP:ABE-0002150,ASAP:ABE-0285113,UniProtKB/Swiss-Prot:P39874,EcoGene:EG13162,GeneID:4056041;Note=pseudogene%2C C-N hydrolase superfamily homology%3Bputative enzyme%3B Not classified~putative amidase;gbkey=CDS;gene=ybeM;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 658225 658818 . + 0 ID=cds622;Parent=gene640;Dbxref=ASAP:ABE-0002148,ASAP:ABE-0002150,ASAP:ABE-0285113,UniProtKB/Swiss-Prot:P39874,EcoGene:EG13162,GeneID:4056041;Note=pseudogene%2C C-N hydrolase superfamily homology%3Bputative enzyme%3B Not classified~putative amidase;gbkey=CDS;gene=ybeM;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 658947 659150 . + . ID=gene641;Dbxref=EcoGene:EG11305,GeneID:945228;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;gene_synonym=ECK0620,JW0622,ybeC;locus_tag=b0627 NC_000913.3 RefSeq CDS 658947 659150 . + 0 ID=cds623;Parent=gene641;Dbxref=ASAP:ABE-0002153,UniProtKB/Swiss-Prot:P0A843,Genbank:NP_415160.1,EcoGene:EG11305,GeneID:945228;Name=NP_415160.1;gbkey=CDS;gene=tatE;product=TatABCE protein translocation system subunit;protein_id=NP_415160.1;transl_table=11 NC_000913.3 RefSeq gene 659251 660216 . - . ID=gene642;Dbxref=EcoGene:EG11306,GeneID:945227;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;gene_synonym=ECK0621,JW0623,lip;locus_tag=b0628 NC_000913.3 RefSeq CDS 659251 660216 . - 0 ID=cds624;Parent=gene642;Dbxref=ASAP:ABE-0002155,UniProtKB/Swiss-Prot:P60716,Genbank:NP_415161.1,EcoGene:EG11306,GeneID:945227;Name=NP_415161.1;Note=lipoate synthesis%2C sulfur insertion?;gbkey=CDS;gene=lipA;product=lipoate synthase;protein_id=NP_415161.1;transl_table=11 NC_000913.3 RefSeq gene 660425 661378 . - . ID=gene643;Dbxref=EcoGene:EG11594,GeneID:945219;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;gene_synonym=ECK0622,JW0624;locus_tag=b0629 NC_000913.3 RefSeq CDS 660425 661378 . - 0 ID=cds625;Parent=gene643;Dbxref=ASAP:ABE-0002158,UniProtKB/Swiss-Prot:P30979,Genbank:NP_415162.4,EcoGene:EG11594,GeneID:945219;Name=NP_415162.4;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ybeF;product=LysR family putative transcriptional regulator;protein_id=NP_415162.4;transl_table=11 NC_000913.3 RefSeq gene 661637 662278 . - . ID=gene644;Dbxref=EcoGene:EG11591,GeneID:945217;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;gene_synonym=cde,ECK0623,JW5089;locus_tag=b0630 NC_000913.3 RefSeq CDS 661637 662278 . - 0 ID=cds626;Parent=gene644;Dbxref=ASAP:ABE-0002160,UniProtKB/Swiss-Prot:P60720,Genbank:NP_415163.2,EcoGene:EG11591,GeneID:945217;Name=NP_415163.2;Note=protein of lipoate biosynthesis;gbkey=CDS;gene=lipB;product=octanoyltransferase%3B octanoyl-[ACP]:protein N-octanoyltransferase;protein_id=NP_415163.2;transl_table=11 NC_000913.3 RefSeq gene 662379 662642 . - . ID=gene645;Dbxref=EcoGene:EG11592,GeneID:945220;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;gene_synonym=ECK0624,JW0626;locus_tag=b0631 NC_000913.3 RefSeq CDS 662379 662642 . - 0 ID=cds627;Parent=gene645;Dbxref=ASAP:ABE-0002162,UniProtKB/Swiss-Prot:P0A8J4,Genbank:NP_415164.1,EcoGene:EG11592,GeneID:945220;Name=NP_415164.1;gbkey=CDS;gene=ybeD;product=UPF0250 family protein;protein_id=NP_415164.1;transl_table=11 NC_000913.3 RefSeq gene 662752 663963 . - . ID=gene646;Dbxref=EcoGene:EG10201,GeneID:945222;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;gene_synonym=ECK0625,JW0627,pfv;locus_tag=b0632 NC_000913.3 RefSeq CDS 662752 663963 . - 0 ID=cds628;Parent=gene646;Dbxref=ASAP:ABE-0002168,UniProtKB/Swiss-Prot:P0AEB2,Genbank:NP_415165.1,EcoGene:EG10201,GeneID:945222;Name=NP_415165.1;Note=D-alanyl-D-alanine carboxypeptidase%2C fraction A%3B penicillin-binding protein 5;gbkey=CDS;gene=dacA;product=D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5);protein_id=NP_415165.1;transl_table=11 NC_000913.3 RefSeq gene 664102 665190 . - . ID=gene647;Dbxref=EcoGene:EG10854,GeneID:945241;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;gene_synonym=ECK0626,JW0628;locus_tag=b0633 NC_000913.3 RefSeq CDS 664102 665190 . - 0 ID=cds629;Parent=gene647;Dbxref=ASAP:ABE-0002171,UniProtKB/Swiss-Prot:P10100,Genbank:NP_415166.1,EcoGene:EG10854,GeneID:945241;Name=NP_415166.1;Note=a minor lipoprotein;gbkey=CDS;gene=rlpA;product=septal ring protein%2C suppressor of prc%2C minor lipoprotein;protein_id=NP_415166.1;transl_table=11 NC_000913.3 RefSeq gene 665201 666313 . - . ID=gene648;Dbxref=EcoGene:EG10607,GeneID:945238;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=ECK0627,JW0629,rodA;locus_tag=b0634 NC_000913.3 RefSeq CDS 665201 666313 . - 0 ID=cds630;Parent=gene648;Dbxref=ASAP:ABE-0002173,UniProtKB/Swiss-Prot:P0ABG7,Genbank:NP_415167.1,EcoGene:EG10607,GeneID:945238;Name=NP_415167.1;Note=rod shape-determining membrane protein%3B sensitivity to radiation and drugs;gbkey=CDS;gene=mrdB;product=cell wall shape-determining protein;protein_id=NP_415167.1;transl_table=11 NC_000913.3 RefSeq gene 666316 668217 . - . ID=gene649;Dbxref=EcoGene:EG10606,GeneID:945240;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;gene_synonym=ECK0628,JW0630,pbpA;locus_tag=b0635 NC_000913.3 RefSeq CDS 666316 668217 . - 0 ID=cds631;Parent=gene649;Dbxref=ASAP:ABE-0002178,UniProtKB/Swiss-Prot:P0AD65,Genbank:NP_415168.1,EcoGene:EG10606,GeneID:945240;Name=NP_415168.1;Note=cell elongation%2C e phase%3B peptidoglycan synthetase%3B penicillin-binding protein 2;gbkey=CDS;gene=mrdA;product=penicillin-binding protein 2%2C transpeptidase involved in peptidoglycan synthesis;protein_id=NP_415168.1;transl_table=11 NC_000913.3 RefSeq gene 668248 668715 . - . ID=gene650;Dbxref=EcoGene:EG11254,GeneID:945239;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;gene_synonym=ECK0629,JW0631,ybeA;locus_tag=b0636 NC_000913.3 RefSeq CDS 668248 668715 . - 0 ID=cds632;Parent=gene650;Dbxref=ASAP:ABE-0002180,UniProtKB/Swiss-Prot:P0A8I8,Genbank:NP_415169.1,EcoGene:EG11254,GeneID:945239;Name=NP_415169.1;gbkey=CDS;gene=rlmH;product=23S rRNA m(3)Psi1915 pseudouridine methyltransferase%2C SAM-dependent;protein_id=NP_415169.1;transl_table=11 NC_000913.3 RefSeq gene 668719 669036 . - . ID=gene651;Dbxref=EcoGene:EG11255,GeneID:945237;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;gene_synonym=ECK0630,JW5090,rsfA,slm3,ybeB;locus_tag=b0637 NC_000913.3 RefSeq CDS 668719 669036 . - 0 ID=cds633;Parent=gene651;Dbxref=ASAP:ABE-0002183,UniProtKB/Swiss-Prot:P0AAT6,Genbank:NP_415170.4,EcoGene:EG11255,GeneID:945237;Name=NP_415170.4;gbkey=CDS;gene=rsfS;product=ribosomal silencing factor;protein_id=NP_415170.4;transl_table=11 NC_000913.3 RefSeq gene 669296 669907 . - . ID=gene652;Dbxref=EcoGene:EG13240,GeneID:945246;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;gene_synonym=ECK0631,JW0633,phpB;locus_tag=b0638 NC_000913.3 RefSeq CDS 669296 669907 . - 0 ID=cds634;Parent=gene652;Dbxref=ASAP:ABE-0002185,UniProtKB/Swiss-Prot:P52086,Genbank:NP_415171.1,EcoGene:EG13240,GeneID:945246;Name=NP_415171.1;Note=homolog of Salmonella cobC%2C a phosphohistidine protein;gbkey=CDS;gene=cobC;product=putative alpha-ribazole-5'-P phosphatase;protein_id=NP_415171.1;transl_table=11 NC_000913.3 RefSeq gene 669931 670572 . - . ID=gene653;Dbxref=EcoGene:EG13241,GeneID:945248;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;gene_synonym=ECK0632,fusB,JW0634,ybeN;locus_tag=b0639 NC_000913.3 RefSeq CDS 669931 670572 . - 0 ID=cds635;Parent=gene653;Dbxref=ASAP:ABE-0002187,UniProtKB/Swiss-Prot:P0A752,Genbank:NP_415172.1,EcoGene:EG13241,GeneID:945248;Name=NP_415172.1;gbkey=CDS;gene=nadD;product=nicotinic acid mononucleotide adenylyltransferase%2C NAD(P)-dependent;protein_id=NP_415172.1;transl_table=11 NC_000913.3 RefSeq gene 670574 671605 . - . ID=gene654;Dbxref=EcoGene:EG11412,GeneID:947573;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;gene_synonym=ECK0633,JW0635;locus_tag=b0640 NC_000913.3 RefSeq CDS 670574 671605 . - 0 ID=cds636;Parent=gene654;Dbxref=ASAP:ABE-0002192,UniProtKB/Swiss-Prot:P28630,Genbank:NP_415173.1,EcoGene:EG11412,GeneID:947573;Name=NP_415173.1;gbkey=CDS;gene=holA;product=DNA polymerase III%2C delta subunit;protein_id=NP_415173.1;transl_table=11 NC_000913.3 RefSeq gene 671605 672186 . - . ID=gene655;Dbxref=EcoGene:EG10855,GeneID:946257;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;gene_synonym=ECK0634,JW0636,rlpB;locus_tag=b0641 NC_000913.3 RefSeq CDS 671605 672186 . - 0 ID=cds637;Parent=gene655;Dbxref=ASAP:ABE-0002194,UniProtKB/Swiss-Prot:P0ADC1,Genbank:NP_415174.1,EcoGene:EG10855,GeneID:946257;Name=NP_415174.1;Note=a minor lipoprotein;gbkey=CDS;gene=lptE;product=LPS assembly OM complex LptDE%2C lipoprotein component;protein_id=NP_415174.1;transl_table=11 NC_000913.3 RefSeq gene 672201 674783 . - . ID=gene656;Dbxref=EcoGene:EG10532,GeneID:947497;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;gene_synonym=ECK0635,JW0637;locus_tag=b0642 NC_000913.3 RefSeq CDS 672201 674783 . - 0 ID=cds638;Parent=gene656;Dbxref=ASAP:ABE-0002196,UniProtKB/Swiss-Prot:P07813,Genbank:NP_415175.1,EcoGene:EG10532,GeneID:947497;Name=NP_415175.1;Note=leucine tRNA synthetase;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=NP_415175.1;transl_table=11 NC_000913.3 RefSeq gene 675018 675500 . + . ID=gene657;Dbxref=EcoGene:EG12851,GeneID:945252;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;gene_synonym=ECK0636,JW0638;locus_tag=b0643 NC_000913.3 RefSeq CDS 675018 675500 . + 0 ID=cds639;Parent=gene657;Dbxref=ASAP:ABE-0002199,UniProtKB/Swiss-Prot:P0AAT9,Genbank:NP_415176.1,EcoGene:EG12851,GeneID:945252;Name=NP_415176.1;Note=putative alpha helical protein;gbkey=CDS;gene=ybeL;product=DUF1451 family protein;protein_id=NP_415176.1;transl_table=11 NC_000913.3 RefSeq gene 675570 676547 . - . ID=gene658;Dbxref=EcoGene:EG13647,GeneID:945251;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;gene_synonym=ECK0637,JW5091;locus_tag=b0644 NC_000913.3 RefSeq CDS 675570 676547 . - 0 ID=cds640;Parent=gene658;Dbxref=ASAP:ABE-0002201,UniProtKB/Swiss-Prot:P77234,Genbank:NP_415177.4,EcoGene:EG13647,GeneID:945251;Name=NP_415177.4;gbkey=CDS;gene=ybeQ;product=Sel1 family TPR-like repeat protein;protein_id=NP_415177.4;transl_table=11 NC_000913.3 RefSeq gene 676711 677418 . + . ID=gene659;Dbxref=EcoGene:EG13648,GeneID:945249;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;gene_synonym=ECK0638,JW0640;locus_tag=b0645 NC_000913.3 RefSeq CDS 676711 677418 . + 0 ID=cds641;Parent=gene659;Dbxref=ASAP:ABE-0002208,UniProtKB/Swiss-Prot:P77627,Genbank:NP_415178.1,EcoGene:EG13648,GeneID:945249;Name=NP_415178.1;gbkey=CDS;gene=ybeR;product=uncharacterized protein;protein_id=NP_415178.1;transl_table=11 NC_000913.3 RefSeq gene 677415 678842 . + . ID=gene660;Dbxref=EcoGene:EG13649,GeneID:945245;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;gene_synonym=ECK0639,JW0641,ybeS;locus_tag=b0646 NC_000913.3 RefSeq CDS 677415 678842 . + 0 ID=cds642;Parent=gene660;Dbxref=ASAP:ABE-0002210,UniProtKB/Swiss-Prot:P77381,Genbank:NP_415179.1,EcoGene:EG13649,GeneID:945245;Name=NP_415179.1;Note=putative enzyme of polynucleotide modification;gbkey=CDS;gene=djlB;product=putative HscC co-chaperone%2C uncharacterized J domain-containing protein;protein_id=NP_415179.1;transl_table=11 NC_000913.3 RefSeq gene 678852 679406 . - . ID=gene661;Dbxref=EcoGene:EG13650,GeneID:945243;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;gene_synonym=ECK0640,JW0642;locus_tag=b0647 NC_000913.3 RefSeq CDS 678852 679406 . - 0 ID=cds643;Parent=gene661;Dbxref=ASAP:ABE-0002213,UniProtKB/Swiss-Prot:P77296,Genbank:NP_415180.1,EcoGene:EG13650,GeneID:945243;Name=NP_415180.1;gbkey=CDS;gene=ybeT;product=Sel1 family TPR-like repeat protein;protein_id=NP_415180.1;transl_table=11 NC_000913.3 RefSeq gene 679508 680215 . + . ID=gene662;Dbxref=EcoGene:EG13651,GeneID:945244;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;gene_synonym=ECK0641,JW0643;locus_tag=b0648 NC_000913.3 RefSeq CDS 679508 680215 . + 0 ID=cds644;Parent=gene662;Dbxref=ASAP:ABE-0002220,UniProtKB/Swiss-Prot:P77427,Genbank:NP_415181.1,EcoGene:EG13651,GeneID:945244;Name=NP_415181.1;Note=putative tRNA ligase;gbkey=CDS;gene=ybeU;product=DUF1266 family protein;protein_id=NP_415181.1;transl_table=11 NC_000913.3 RefSeq gene 680212 681663 . + . ID=gene663;Dbxref=EcoGene:EG13652,GeneID:945253;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;gene_synonym=ECK0642,hscD,JW0644,ybeV;locus_tag=b0649 NC_000913.3 RefSeq CDS 680212 681663 . + 0 ID=cds645;Parent=gene663;Dbxref=ASAP:ABE-0002222,UniProtKB/Swiss-Prot:P77359,Genbank:NP_415182.1,EcoGene:EG13652,GeneID:945253;Name=NP_415182.1;gbkey=CDS;gene=djlC;product=J domain-containing HscC co-chaperone%3B Hsc56;protein_id=NP_415182.1;transl_table=11 NC_000913.3 RefSeq repeat_region 681685 681714 . + . ID=id93;Note=REP57 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 681723 683393 . - . ID=gene664;Dbxref=EcoGene:EG13653,GeneID:945218;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;gene_synonym=ECK0643,JW0645,ybeW;locus_tag=b0650 NC_000913.3 RefSeq CDS 681723 683393 . - 0 ID=cds646;Parent=gene664;Dbxref=ASAP:ABE-0002225,UniProtKB/Swiss-Prot:P77319,Genbank:NP_415183.1,EcoGene:EG13653,GeneID:945218;Name=NP_415183.1;gbkey=CDS;gene=hscC;product=Hsp70 family chaperone Hsc62%3B RpoD-binding transcription inhibitor;protein_id=NP_415183.1;transl_table=11 NC_000913.3 RefSeq gene 683477 684412 . - . ID=gene665;Dbxref=EcoGene:EG12701,GeneID:945503;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;gene_synonym=ECK0644,JW0646,ybeK;locus_tag=b0651 NC_000913.3 RefSeq CDS 683477 684412 . - 0 ID=cds647;Parent=gene665;Dbxref=ASAP:ABE-0002227,UniProtKB/Swiss-Prot:P41409,Genbank:NP_415184.1,EcoGene:EG12701,GeneID:945503;Name=NP_415184.1;gbkey=CDS;gene=rihA;product=ribonucleoside hydrolase 1;protein_id=NP_415184.1;transl_table=11 NC_000913.3 RefSeq gene 684530 685255 . - . ID=gene666;Dbxref=EcoGene:EG12663,GeneID:945254;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;gene_synonym=ECK0645,JW0647;locus_tag=b0652 NC_000913.3 RefSeq CDS 684530 685255 . - 0 ID=cds648;Parent=gene666;Dbxref=ASAP:ABE-0002232,UniProtKB/Swiss-Prot:P0AAG3,Genbank:NP_415185.1,EcoGene:EG12663,GeneID:945254;Name=NP_415185.1;Note=ATP-binding protein of glutamate/aspartate transport system;gbkey=CDS;gene=gltL;product=glutamate/aspartate ABC transporter ATPase;protein_id=NP_415185.1;transl_table=11 NC_000913.3 RefSeq gene 685255 685929 . - . ID=gene667;Dbxref=EcoGene:EG12662,GeneID:947354;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;gene_synonym=ECK0646,JW0648;locus_tag=b0653 NC_000913.3 RefSeq CDS 685255 685929 . - 0 ID=cds649;Parent=gene667;Dbxref=ASAP:ABE-0002234,UniProtKB/Swiss-Prot:P0AER5,Genbank:NP_415186.1,EcoGene:EG12662,GeneID:947354;Name=NP_415186.1;Note=glutamate/aspartate transport system permease%3B membrane component of ABC superfamily;gbkey=CDS;gene=gltK;product=glutamate/aspartate ABC transporter permease;protein_id=NP_415186.1;transl_table=11 NC_000913.3 RefSeq gene 685929 686669 . - . ID=gene668;Dbxref=EcoGene:EG12661,GeneID:945443;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;gene_synonym=ECK0647,JW0649;locus_tag=b0654 NC_000913.3 RefSeq CDS 685929 686669 . - 0 ID=cds650;Parent=gene668;Dbxref=ASAP:ABE-0002239,UniProtKB/Swiss-Prot:P0AER3,Genbank:NP_415187.1,EcoGene:EG12661,GeneID:945443;Name=NP_415187.1;Note=glutamate/aspartate transport system permease%3B membrane component of ABC superfamily;gbkey=CDS;gene=gltJ;product=glutamate/aspartate ABC transporter permease;protein_id=NP_415187.1;transl_table=11 NC_000913.3 RefSeq repeat_region 686750 686774 . + . ID=id94;Note=REP58 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 686839 687747 . - . ID=gene669;Dbxref=EcoGene:EG12700,GeneID:946938;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;gene_synonym=ECK0648,JW5092,ybeJ,yzzK;locus_tag=b0655 NC_000913.3 RefSeq CDS 686839 687747 . - 0 ID=cds651;Parent=gene669;Dbxref=ASAP:ABE-0002241,UniProtKB/Swiss-Prot:P37902,Genbank:NP_415188.1,EcoGene:EG12700,GeneID:946938;Name=NP_415188.1;Note=periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=gltI;product=glutamate/aspartate periplasmic binding protein;protein_id=NP_415188.1;transl_table=11 NC_000913.3 RefSeq region 687851 689045 . - . ID=id95;gbkey=mobile_element NC_000913.3 RefSeq gene 687997 689013 . - . ID=gene670;Dbxref=EcoGene:EG40008,GeneID:944917;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b0656 NC_000913.3 RefSeq CDS 687997 689013 . - 0 ID=cds652;Parent=gene670;Dbxref=ASAP:ABE-0002246,UniProtKB/Swiss-Prot:P0CE51,Genbank:NP_415189.1,EcoGene:EG40008,GeneID:944917;Name=NP_415189.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_415189.1;transl_table=11 NC_000913.3 RefSeq repeat_region 689264 689297 . + . ID=id96;Note=REP59 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 689343 690881 . - . ID=gene671;Dbxref=EcoGene:EG10168,GeneID:946201;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;gene_synonym=cutE,ECK0649,JW0654;locus_tag=b0657 NC_000913.3 RefSeq CDS 689343 690881 . - 0 ID=cds653;Parent=gene671;Dbxref=ASAP:ABE-0002250,UniProtKB/Swiss-Prot:P23930,Genbank:NP_415190.1,EcoGene:EG10168,GeneID:946201;Name=NP_415190.1;Note=apolipoprotein N-acyltransferase%2C copper homeostasis protein%2C inner membrane;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=NP_415190.1;transl_table=11 NC_000913.3 RefSeq gene 690906 691784 . - . ID=gene672;Dbxref=EcoGene:EG13654,GeneID:946417;Name=ybeX;gbkey=Gene;gene=ybeX;gene_biotype=protein_coding;gene_synonym=corC,ECK0650,JW0655;locus_tag=b0658 NC_000913.3 RefSeq CDS 690906 691784 . - 0 ID=cds654;Parent=gene672;Dbxref=ASAP:ABE-0002252,UniProtKB/Swiss-Prot:P0AE78,Genbank:NP_415191.1,EcoGene:EG13654,GeneID:946417;Name=NP_415191.1;Note=putative transport protein;gbkey=CDS;gene=ybeX;product=putative ion transport;protein_id=NP_415191.1;transl_table=11 NC_000913.3 RefSeq gene 691874 692341 . - . ID=gene673;Dbxref=EcoGene:EG13655,GeneID:946430;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;gene_synonym=ECK0651,JW0656;locus_tag=b0659 NC_000913.3 RefSeq CDS 691874 692341 . - 0 ID=cds655;Parent=gene673;Dbxref=ASAP:ABE-0002255,UniProtKB/Swiss-Prot:P0A898,Genbank:NP_415192.1,EcoGene:EG13655,GeneID:946430;Name=NP_415192.1;gbkey=CDS;gene=ybeY;product=ssRNA-specific endoribonuclease%3B 16S rRNA 3' end maturation and quality control co-endoribonuclease working with RNase R%3B rRNA transcription antitermination factor;protein_id=NP_415192.1;transl_table=11 NC_000913.3 RefSeq gene 692338 693378 . - . ID=gene674;Dbxref=EcoGene:EG13656,GeneID:948044;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;gene_synonym=ECK0652,JW0657,phoL;locus_tag=b0660 NC_000913.3 RefSeq CDS 692338 693378 . - 0 ID=cds656;Parent=gene674;Dbxref=ASAP:ABE-0002257,UniProtKB/Swiss-Prot:P0A9K3,Genbank:NP_415193.2,EcoGene:EG13656,GeneID:948044;Name=NP_415193.2;Note=putative ATP-binding protein in pho regulon;gbkey=CDS;gene=ybeZ;product=heat shock protein%2C putative NTPase%3B PhoH-like protein;protein_id=NP_415193.2;transl_table=11 NC_000913.3 RefSeq gene 693531 694955 . - . ID=gene675;Dbxref=EcoGene:EG13657,GeneID:945260;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;gene_synonym=ECK0653,JW0658,yleA;locus_tag=b0661 NC_000913.3 RefSeq CDS 693531 694955 . - 0 ID=cds657;Parent=gene675;Dbxref=ASAP:ABE-0002260,UniProtKB/Swiss-Prot:P0AEI1,Genbank:NP_415194.1,EcoGene:EG13657,GeneID:945260;Name=NP_415194.1;gbkey=CDS;gene=miaB;product=tRNA-i(6)A37 methylthiotransferase;protein_id=NP_415194.1;transl_table=11 NC_000913.3 RefSeq gene 695101 696276 . + . ID=gene676;Dbxref=EcoGene:EG13658,GeneID:945261;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=ECK0654,JW0659,yleB;locus_tag=b0662 NC_000913.3 RefSeq CDS 695101 696276 . + 0 ID=cds658;Parent=gene676;Dbxref=ASAP:ABE-0002265,UniProtKB/Swiss-Prot:P75728,Genbank:NP_415195.1,EcoGene:EG13658,GeneID:945261;Name=NP_415195.1;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol oxygenase;protein_id=NP_415195.1;transl_table=11 NC_000913.3 RefSeq repeat_region 696307 696377 . + . ID=id97;Note=REP60 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 696430 696504 . - . ID=gene677;Dbxref=EcoGene:EG30031,GeneID:945257;Name=glnX;gbkey=Gene;gene=glnX;gene_biotype=tRNA;gene_synonym=ECK0655,glnVbeta,JWR0011,supE;locus_tag=b0664 NC_000913.3 RefSeq tRNA 696430 696504 . - . ID=rna18;Parent=gene677;Dbxref=ASAP:ABE-0002272,EcoGene:EG30031,GeneID:945257;Note=anticodon: CUG;gbkey=tRNA;gene=glnX;product=tRNA-Gln NC_000913.3 RefSeq exon 696430 696504 . - . ID=id98;Parent=rna18;Dbxref=ASAP:ABE-0002272,EcoGene:EG30031,GeneID:945257;Note=anticodon: CUG;gbkey=tRNA;gene=glnX;product=tRNA-Gln NC_000913.3 RefSeq gene 696542 696616 . - . ID=gene678;Dbxref=EcoGene:EG30029,GeneID:945255;Name=glnV;gbkey=Gene;gene=glnV;gene_biotype=tRNA;gene_synonym=ECK0656,glnValpha,JWR0012,Su2,suII,supE;locus_tag=b0665 NC_000913.3 RefSeq tRNA 696542 696616 . - . ID=rna19;Parent=gene678;Dbxref=ASAP:ABE-0002274,EcoGene:EG30029,GeneID:945255;Note=anticodon: CUG;gbkey=tRNA;gene=glnV;product=tRNA-Gln NC_000913.3 RefSeq exon 696542 696616 . - . ID=id99;Parent=rna19;Dbxref=ASAP:ABE-0002274,EcoGene:EG30029,GeneID:945255;Note=anticodon: CUG;gbkey=tRNA;gene=glnV;product=tRNA-Gln NC_000913.3 RefSeq gene 696664 696740 . - . ID=gene679;Dbxref=EcoGene:EG30059,GeneID:945262;Name=metU;gbkey=Gene;gene=metU;gene_biotype=tRNA;gene_synonym=ECK0657,JWR0013,metTbeta;locus_tag=b0666 NC_000913.3 RefSeq tRNA 696664 696740 . - . ID=rna20;Parent=gene679;Dbxref=ASAP:ABE-0002276,EcoGene:EG30059,GeneID:945262;Note=anticodon: CAU;gbkey=tRNA;gene=metU;product=tRNA-Met NC_000913.3 RefSeq exon 696664 696740 . - . ID=id100;Parent=rna20;Dbxref=ASAP:ABE-0002276,EcoGene:EG30059,GeneID:945262;Note=anticodon: CAU;gbkey=tRNA;gene=metU;product=tRNA-Met NC_000913.3 RefSeq gene 696756 696830 . - . ID=gene680;Dbxref=EcoGene:EG30030,GeneID:945750;Name=glnW;gbkey=Gene;gene=glnW;gene_biotype=tRNA;gene_synonym=ECK0658,glnUbeta,JWR0014;locus_tag=b0668 NC_000913.3 RefSeq tRNA 696756 696830 . - . ID=rna21;Parent=gene680;Dbxref=ASAP:ABE-0002280,EcoGene:EG30030,GeneID:945750;Note=anticodon: UUG;gbkey=tRNA;gene=glnW;product=tRNA-Gln NC_000913.3 RefSeq exon 696756 696830 . - . ID=id101;Parent=rna21;Dbxref=ASAP:ABE-0002280,EcoGene:EG30030,GeneID:945750;Note=anticodon: UUG;gbkey=tRNA;gene=glnW;product=tRNA-Gln NC_000913.3 RefSeq gene 696865 696939 . - . ID=gene681;Dbxref=EcoGene:EG30028,GeneID:945269;Name=glnU;gbkey=Gene;gene=glnU;gene_biotype=tRNA;gene_synonym=ECK0659,glnUalpha,JWR0015,supB;locus_tag=b0670 NC_000913.3 RefSeq tRNA 696865 696939 . - . ID=rna22;Parent=gene681;Dbxref=ASAP:ABE-0002284,EcoGene:EG30028,GeneID:945269;Note=anticodon: UUG;gbkey=tRNA;gene=glnU;product=tRNA-Gln NC_000913.3 RefSeq exon 696865 696939 . - . ID=id102;Parent=rna22;Dbxref=ASAP:ABE-0002284,EcoGene:EG30028,GeneID:945269;Note=anticodon: UUG;gbkey=tRNA;gene=glnU;product=tRNA-Gln NC_000913.3 RefSeq gene 696963 697047 . - . ID=gene682;Dbxref=EcoGene:EG30052,GeneID:945264;Name=leuW;gbkey=Gene;gene=leuW;gene_biotype=tRNA;gene_synonym=ECK0660,feeB,JWR0016;locus_tag=b0672 NC_000913.3 RefSeq tRNA 696963 697047 . - . ID=rna23;Parent=gene682;Dbxref=ASAP:ABE-0002288,EcoGene:EG30052,GeneID:945264;Note=anticodon: CAA;gbkey=tRNA;gene=leuW;product=tRNA-Leu NC_000913.3 RefSeq exon 696963 697047 . - . ID=id103;Parent=rna23;Dbxref=ASAP:ABE-0002288,EcoGene:EG30052,GeneID:945264;Note=anticodon: CAA;gbkey=tRNA;gene=leuW;product=tRNA-Leu NC_000913.3 RefSeq gene 697057 697133 . - . ID=gene683;Dbxref=EcoGene:EG30058,GeneID:945280;Name=metT;gbkey=Gene;gene=metT;gene_biotype=tRNA;gene_synonym=ECK0661,JWR0017,metTalpha;locus_tag=b0673 NC_000913.3 RefSeq tRNA 697057 697133 . - . ID=rna24;Parent=gene683;Dbxref=ASAP:ABE-0002290,EcoGene:EG30058,GeneID:945280;Note=anticodon: CAU;gbkey=tRNA;gene=metT;product=tRNA-Met NC_000913.3 RefSeq exon 697057 697133 . - . ID=id104;Parent=rna24;Dbxref=ASAP:ABE-0002290,EcoGene:EG30058,GeneID:945280;Note=anticodon: CAU;gbkey=tRNA;gene=metT;product=tRNA-Met NC_000913.3 RefSeq gene 697513 699177 . - . ID=gene684;Dbxref=EcoGene:EG10092,GeneID:945281;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;gene_synonym=ECK0662,JW0660;locus_tag=b0674 NC_000913.3 RefSeq CDS 697513 699177 . - 0 ID=cds659;Parent=gene684;Dbxref=ASAP:ABE-0002292,UniProtKB/Swiss-Prot:P22106,Genbank:NP_415200.1,EcoGene:EG10092,GeneID:945281;Name=NP_415200.1;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=NP_415200.1;transl_table=11 NC_000913.3 RefSeq repeat_region 699425 699522 . + . ID=id105;Note=RIP61 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 699574 700326 . - . ID=gene685;Dbxref=EcoGene:EG10634,GeneID:945283;Name=umpH;gbkey=Gene;gene=umpH;gene_biotype=protein_coding;gene_synonym=ECK0663,JW0661,nagD;locus_tag=b0675 NC_000913.3 RefSeq CDS 699574 700326 . - 0 ID=cds660;Parent=gene685;Dbxref=ASAP:ABE-0002296,UniProtKB/Swiss-Prot:P0AF24,Genbank:NP_415201.1,EcoGene:EG10634,GeneID:945283;Name=NP_415201.1;Note=N-acetylglucosamine metabolism;gbkey=CDS;gene=umpH;product=UMP phosphatase;protein_id=NP_415201.1;transl_table=11 NC_000913.3 RefSeq gene 700374 701594 . - . ID=gene686;Dbxref=EcoGene:EG10636,GeneID:945285;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=ECK0664,JW0662,nagR;locus_tag=b0676 NC_000913.3 RefSeq CDS 700374 701594 . - 0 ID=cds661;Parent=gene686;Dbxref=ASAP:ABE-0002299,UniProtKB/Swiss-Prot:P0AF20,Genbank:NP_415202.1,EcoGene:EG10636,GeneID:945285;Name=NP_415202.1;Note=transcriptional repressor of nag (N-acetylglucosamine) operon;gbkey=CDS;gene=nagC;product=N-acetylglucosamine-inducible nag divergent operon transcriptional repressor;protein_id=NP_415202.1;transl_table=11 NC_000913.3 RefSeq gene 701603 702751 . - . ID=gene687;Dbxref=EcoGene:EG10632,GeneID:945289;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;gene_synonym=ECK0665,JW0663;locus_tag=b0677 NC_000913.3 RefSeq CDS 701603 702751 . - 0 ID=cds662;Parent=gene687;Dbxref=ASAP:ABE-0002301,UniProtKB/Swiss-Prot:P0AF18,Genbank:NP_415203.1,EcoGene:EG10632,GeneID:945289;Name=NP_415203.1;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=NP_415203.1;transl_table=11 NC_000913.3 RefSeq gene 702811 703611 . - . ID=gene688;Dbxref=EcoGene:EG10633,GeneID:945290;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;gene_synonym=ECK0666,glmD,JW0664;locus_tag=b0678 NC_000913.3 RefSeq CDS 702811 703611 . - 0 ID=cds663;Parent=gene688;Dbxref=ASAP:ABE-0002304,UniProtKB/Swiss-Prot:P0A759,Genbank:NP_415204.1,EcoGene:EG10633,GeneID:945290;Name=NP_415204.1;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=NP_415204.1;transl_table=11 NC_000913.3 RefSeq gene 703944 705890 . + . ID=gene689;Dbxref=EcoGene:EG10635,GeneID:945292;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;gene_synonym=ECK0667,JW0665,pstN,ptsN;locus_tag=b0679 NC_000913.3 RefSeq CDS 703944 705890 . + 0 ID=cds664;Parent=gene689;Dbxref=ASAP:ABE-0002312,UniProtKB/Swiss-Prot:P09323,Genbank:NP_415205.1,EcoGene:EG10635,GeneID:945292;Name=NP_415205.1;Note=PTS system%2C N-acetylglucosamine-specific enzyme IIABC;gbkey=CDS;gene=nagE;product=N-acetyl glucosamine specific PTS enzyme IIC%2C IIB%2C and IIA components;protein_id=NP_415205.1;transl_table=11 NC_000913.3 RefSeq repeat_region 705897 705932 . + . ID=id106;Note=REP62 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 706093 707757 . + . ID=gene690;Dbxref=EcoGene:EG10390,GeneID:945310;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;gene_synonym=ECK0668,JW0666;locus_tag=b0680 NC_000913.3 RefSeq CDS 706093 707757 . + 0 ID=cds665;Parent=gene690;Dbxref=ASAP:ABE-0002317,UniProtKB/Swiss-Prot:P00962,Genbank:NP_415206.1,EcoGene:EG10390,GeneID:945310;Name=NP_415206.1;Note=glutamine tRNA synthetase;gbkey=CDS;gene=glnS;product=glutamyl-tRNA synthetase;protein_id=NP_415206.1;transl_table=11 NC_000913.3 RefSeq repeat_region 707770 707934 . + . ID=id107;Note=RIP63 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 708334 709740 . + . ID=gene691;Dbxref=EcoGene:EG13659,GeneID:945296;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;gene_synonym=ECK0669,JW0667,ybfM;locus_tag=b0681 NC_000913.3 RefSeq CDS 708334 709740 . + 0 ID=cds666;Parent=gene691;Dbxref=ASAP:ABE-0002323,UniProtKB/Swiss-Prot:P75733,Genbank:NP_415207.1,EcoGene:EG13659,GeneID:945296;Name=NP_415207.1;gbkey=CDS;gene=chiP;product=chitoporin%2C uptake of chitosugars;protein_id=NP_415207.1;transl_table=11 NC_000913.3 RefSeq gene 709790 710116 . + . ID=gene692;Dbxref=EcoGene:EG13660,GeneID:945713;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;gene_synonym=ECK0670,JW0668,ybfN;locus_tag=b0682 NC_000913.3 RefSeq CDS 709790 710116 . + 0 ID=cds667;Parent=gene692;Dbxref=ASAP:ABE-0002325,UniProtKB/Swiss-Prot:P75734,Genbank:NP_415208.1,EcoGene:EG13660,GeneID:945713;Name=NP_415208.1;gbkey=CDS;gene=chiQ;product=chitosugar-induced verified lipoprotein;protein_id=NP_415208.1;transl_table=11 NC_000913.3 RefSeq gene 710200 710646 . - . ID=gene693;Dbxref=EcoGene:EG10359,GeneID:945295;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;gene_synonym=ECK0671,JW0669;locus_tag=b0683 NC_000913.3 RefSeq CDS 710200 710646 . - 0 ID=cds668;Parent=gene693;Dbxref=ASAP:ABE-0002327,UniProtKB/Swiss-Prot:P0A9A9,Genbank:NP_415209.1,EcoGene:EG10359,GeneID:945295;Name=NP_415209.1;Note=negative regulator;gbkey=CDS;gene=fur;product=ferric iron uptake regulon transcriptional repressor%3B autorepressor;protein_id=NP_415209.1;transl_table=11 NC_000913.3 RefSeq gene 710639 710725 . - . ID=gene694;Dbxref=EcoGene:EG14465,GeneID:5625562;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;gene_synonym=ECK4461;locus_tag=b4637 NC_000913.3 RefSeq CDS 710639 710725 . - 0 ID=cds669;Parent=gene694;Dbxref=UniProtKB/Swiss-Prot:A8DYP9,Genbank:YP_001491546.1,EcoGene:EG14465,GeneID:5625562;Name=YP_001491546.1;gbkey=CDS;gene=uof;product=ryhB-regulated fur leader peptide;protein_id=YP_001491546.1;transl_table=11 NC_000913.3 RefSeq repeat_region 710908 710940 . + . ID=id108;Note=REP64 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 710935 711465 . - . ID=gene695;Dbxref=EcoGene:EG10318,GeneID:945293;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;gene_synonym=ECK0672,JW0671;locus_tag=b0684 NC_000913.3 RefSeq CDS 710935 711465 . - 0 ID=cds670;Parent=gene695;Dbxref=ASAP:ABE-0002332,UniProtKB/Swiss-Prot:P61949,Genbank:NP_415210.1,EcoGene:EG10318,GeneID:945293;Name=NP_415210.1;gbkey=CDS;gene=fldA;product=flavodoxin 1;protein_id=NP_415210.1;transl_table=11 NC_000913.3 RefSeq gene 711605 711898 . - . ID=gene696;Dbxref=EcoGene:EG11775,GeneID:945291;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;gene_synonym=ECK0673,JW5816;locus_tag=b0685 NC_000913.3 RefSeq CDS 711605 711898 . - 0 ID=cds671;Parent=gene696;Dbxref=ASAP:ABE-0002335,UniProtKB/Swiss-Prot:P0AAU7,Genbank:NP_415211.2,EcoGene:EG11775,GeneID:945291;Name=NP_415211.2;gbkey=CDS;gene=ybfE;product=LexA-regulated protein%2C CopB family;protein_id=NP_415211.2;transl_table=11 NC_000913.3 RefSeq gene 712038 712802 . - . ID=gene697;Dbxref=EcoGene:EG11776,GeneID:945288;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;gene_synonym=ECK0674,JW0673;locus_tag=b0686 NC_000913.3 RefSeq CDS 712038 712802 . - 0 ID=cds672;Parent=gene697;Dbxref=ASAP:ABE-0002337,UniProtKB/Swiss-Prot:P75736,Genbank:NP_415212.1,EcoGene:EG11776,GeneID:945288;Name=NP_415212.1;gbkey=CDS;gene=ybfF;product=acyl-CoA esterase;protein_id=NP_415212.1;transl_table=11 NC_000913.3 RefSeq gene 712987 713532 . + . ID=gene698;Dbxref=EcoGene:EG12197,GeneID:945272;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;gene_synonym=ECK0675,hsm-1,JW0674;locus_tag=b0687 NC_000913.3 RefSeq CDS 712987 713532 . + 0 ID=cds673;Parent=gene698;Dbxref=ASAP:ABE-0002343,UniProtKB/Swiss-Prot:P0AFY8,Genbank:NP_415213.1,EcoGene:EG12197,GeneID:945272;Name=NP_415213.1;Note=negative modulator of initiation of replication;gbkey=CDS;gene=seqA;product=negative modulator of initiation of replication;protein_id=NP_415213.1;transl_table=11 NC_000913.3 RefSeq gene 713558 715198 . + . ID=gene699;Dbxref=EcoGene:EG12144,GeneID:945271;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;gene_synonym=blu,ECK0676,JW0675,pgmA;locus_tag=b0688 NC_000913.3 RefSeq CDS 713558 715198 . + 0 ID=cds674;Parent=gene699;Dbxref=ASAP:ABE-0002345,UniProtKB/Swiss-Prot:P36938,Genbank:NP_415214.1,EcoGene:EG12144,GeneID:945271;Name=NP_415214.1;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=NP_415214.1;transl_table=11 NC_000913.3 RefSeq repeat_region 715264 715361 . + . ID=id109;Note=RIP65 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 715412 715906 . + . ID=gene700;Dbxref=EcoGene:EG14158,GeneID:945274;Name=ybfP;gbkey=Gene;gene=ybfP;gene_biotype=protein_coding;gene_synonym=ECK0677,JW0676;locus_tag=b0689 NC_000913.3 RefSeq CDS 715412 715906 . + 0 ID=cds675;Parent=gene700;Dbxref=ASAP:ABE-0002350,UniProtKB/Swiss-Prot:P75737,Genbank:NP_415215.1,EcoGene:EG14158,GeneID:945274;Name=NP_415215.1;Note=putative pectinase;gbkey=CDS;gene=ybfP;product=lipoprotein;protein_id=NP_415215.1;transl_table=11 NC_000913.3 RefSeq gene 715947 716597 . - . ID=gene701;Dbxref=EcoGene:EG11777,GeneID:945287;Name=ybfG;gbkey=Gene;gene=ybfG;gene_biotype=pseudogene;gene_synonym=ECK0678,JW5094,ybfH;locus_tag=b0691;pseudo=true NC_000913.3 RefSeq CDS 715947 716597 . - 0 ID=cds676;Parent=gene701;Dbxref=ASAP:ABE-0002352,ASAP:ABE-0002355,UniProtKB/Swiss-Prot:P37003,EcoGene:EG11777,GeneID:945287;Note=pseudogene;gbkey=CDS;gene=ybfG;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 716721 716870 . - . ID=gene702;Dbxref=EcoGene:EG12390,GeneID:5625563;Name=ybfI;gbkey=Gene;gene=ybfI;gene_biotype=pseudogene;gene_synonym=ECK4436;locus_tag=b4636;pseudo=true NC_000913.3 RefSeq CDS 716721 716870 . - 0 ID=cds677;Parent=gene702;Dbxref=UniProtKB/Swiss-Prot:P39901,EcoGene:EG12390,GeneID:5625563;Note=pseudogene;gbkey=CDS;gene=ybfI;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 716946 718265 . - . ID=gene703;Dbxref=EcoGene:EG10753,GeneID:945422;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;gene_synonym=ECK0680,JW0679;locus_tag=b0692 NC_000913.3 RefSeq CDS 716946 718265 . - 0 ID=cds678;Parent=gene703;Dbxref=ASAP:ABE-0002360,UniProtKB/Swiss-Prot:P0AAF1,Genbank:NP_415219.1,EcoGene:EG10753,GeneID:945422;Name=NP_415219.1;Note=putrescine transport protein;gbkey=CDS;gene=potE;product=putrescine/proton symporter: putrescine/ornithine antiporter;protein_id=NP_415219.1;transl_table=11 NC_000913.3 RefSeq gene 718262 720460 . - . ID=gene704;Dbxref=EcoGene:EG10964,GeneID:945297;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;gene_synonym=ECK0681,JW0680;locus_tag=b0693 NC_000913.3 RefSeq CDS 718262 720460 . - 0 ID=cds679;Parent=gene704;Dbxref=ASAP:ABE-0002362,UniProtKB/Swiss-Prot:P24169,Genbank:NP_415220.1,EcoGene:EG10964,GeneID:945297;Name=NP_415220.1;gbkey=CDS;gene=speF;product=ornithine decarboxylase isozyme%2C inducible;protein_id=NP_415220.1;transl_table=11 NC_000913.3 RefSeq gene 720583 720840 . + . ID=gene705;Dbxref=EcoGene:EG12869,GeneID:948953;Name=ybfK;gbkey=Gene;gene=ybfK;gene_biotype=protein_coding;gene_synonym=ECK4400;locus_tag=b4590 NC_000913.3 RefSeq CDS 720583 720840 . + 0 ID=cds680;Parent=gene705;Dbxref=UniProtKB/Swiss-Prot:P46121,Genbank:YP_001165310.1,EcoGene:EG12869,GeneID:948953;Name=YP_001165310.1;gbkey=CDS;gene=ybfK;product=uncharacterized protein;protein_id=YP_001165310.1;transl_table=11 NC_000913.3 RefSeq gene 721056 721733 . - . ID=gene706;Dbxref=EcoGene:EG10517,GeneID:945302;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;gene_synonym=ECK0682,JW5096;locus_tag=b0694 NC_000913.3 RefSeq CDS 721056 721733 . - 0 ID=cds681;Parent=gene706;Dbxref=ASAP:ABE-0002366,UniProtKB/Swiss-Prot:P21866,Genbank:NP_415222.1,EcoGene:EG10517,GeneID:945302;Name=NP_415222.1;Note=regulator of kdp operon (transcriptional effector);gbkey=CDS;gene=kdpE;product=response regulator in two-component regulatory system with KdpD;protein_id=NP_415222.1;transl_table=11 NC_000913.3 RefSeq gene 721730 724414 . - . ID=gene707;Dbxref=EcoGene:EG10516,GeneID:946744;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;gene_synonym=ECK0683,JW0683,kac;locus_tag=b0695 NC_000913.3 RefSeq CDS 721730 724414 . - 0 ID=cds682;Parent=gene707;Dbxref=ASAP:ABE-0002368,UniProtKB/Swiss-Prot:P21865,Genbank:NP_415223.1,EcoGene:EG10516,GeneID:946744;Name=NP_415223.1;Note=sensor for high-affinity potassium transport system%3B sensory histidine kinase;gbkey=CDS;gene=kdpD;product=fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein;protein_id=NP_415223.1;transl_table=11 NC_000913.3 RefSeq gene 724407 724979 . - . ID=gene708;Dbxref=EcoGene:EG10515,GeneID:947508;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;gene_synonym=ECK0684,JW0684,kac;locus_tag=b0696 NC_000913.3 RefSeq CDS 724407 724979 . - 0 ID=cds683;Parent=gene708;Dbxref=ASAP:ABE-0002374,UniProtKB/Swiss-Prot:P03961,Genbank:NP_415224.1,EcoGene:EG10515,GeneID:947508;Name=NP_415224.1;Note=high-affinity potassium transport system;gbkey=CDS;gene=kdpC;product=potassium translocating ATPase%2C subunit C;protein_id=NP_415224.1;transl_table=11 NC_000913.3 RefSeq gene 724988 727036 . - . ID=gene709;Dbxref=EcoGene:EG10514,GeneID:947450;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;gene_synonym=ECK0685,JW0685,kac;locus_tag=b0697 NC_000913.3 RefSeq CDS 724988 727036 . - 0 ID=cds684;Parent=gene709;Dbxref=ASAP:ABE-0002376,UniProtKB/Swiss-Prot:P03960,Genbank:NP_415225.1,EcoGene:EG10514,GeneID:947450;Name=NP_415225.1;Note=ATPase of high-affinity potassium transport system%2C B chain;gbkey=CDS;gene=kdpB;product=potassium translocating ATPase%2C subunit B;protein_id=NP_415225.1;transl_table=11 NC_000913.3 RefSeq gene 727059 728732 . - . ID=gene710;Dbxref=EcoGene:EG10513,GeneID:946045;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;gene_synonym=ECK0686,JW0686,kac;locus_tag=b0698 NC_000913.3 RefSeq CDS 727059 728732 . - 0 ID=cds685;Parent=gene710;Dbxref=ASAP:ABE-0002381,UniProtKB/Swiss-Prot:P03959,Genbank:NP_415226.1,EcoGene:EG10513,GeneID:946045;Name=NP_415226.1;Note=ATPase of high-affinity potassium transport system%2C A chain;gbkey=CDS;gene=kdpA;product=potassium translocating ATPase%2C subunit A;protein_id=NP_415226.1;transl_table=11 NC_000913.3 RefSeq gene 728732 728821 . - . ID=gene711;Dbxref=EcoGene:EG12126,GeneID:948946;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;gene_synonym=ECK0687,JW0687;locus_tag=b4513 NC_000913.3 RefSeq CDS 728732 728821 . - 0 ID=cds686;Parent=gene711;Dbxref=ASAP:ABE-0285034,UniProtKB/Swiss-Prot:P36937,Genbank:YP_588443.1,EcoGene:EG12126,GeneID:948946;Name=YP_588443.1;gbkey=CDS;gene=kdpF;product=potassium ion accessory transporter subunit;protein_id=YP_588443.1;transl_table=11 NC_000913.3 RefSeq gene 729134 729340 . + . ID=gene712;Dbxref=EcoGene:EG11521,GeneID:947452;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;gene_synonym=ECK0688,JW0688;locus_tag=b0699 NC_000913.3 RefSeq CDS 729134 729340 . + 0 ID=cds687;Parent=gene712;Dbxref=ASAP:ABE-0002386,UniProtKB/Swiss-Prot:P0AAU2,Genbank:NP_415228.1,EcoGene:EG11521,GeneID:947452;Name=NP_415228.1;gbkey=CDS;gene=ybfA;product=DUF2517 family protein;protein_id=NP_415228.1;transl_table=11 NC_000913.3 RefSeq gene 729583 733776 . + . ID=gene713;Dbxref=EcoGene:EG10848,GeneID:945306;Name=rhsC;gbkey=Gene;gene=rhsC;gene_biotype=protein_coding;gene_synonym=ECK0689,JW0689;locus_tag=b0700 NC_000913.3 RefSeq CDS 729583 733776 . + 0 ID=cds688;Parent=gene713;Dbxref=ASAP:ABE-0002392,UniProtKB/Swiss-Prot:P16918,Genbank:NP_415229.1,EcoGene:EG10848,GeneID:945306;Name=NP_415229.1;gbkey=CDS;gene=rhsC;product=Rhs protein with putative toxin domain%3B putative neighboring cell growth inhibitor;protein_id=NP_415229.1;transl_table=11 NC_000913.3 RefSeq gene 733776 734102 . + . ID=gene714;Dbxref=EcoGene:EG11522,GeneID:947566;Name=ybfB;gbkey=Gene;gene=ybfB;gene_biotype=protein_coding;gene_synonym=ECK0690,JW0691;locus_tag=b0702 NC_000913.3 RefSeq CDS 733776 734102 . + 0 ID=cds689;Parent=gene714;Dbxref=ASAP:ABE-0002398,UniProtKB/Swiss-Prot:P0AAU5,Genbank:NP_415230.1,EcoGene:EG11522,GeneID:947566;Name=NP_415230.1;gbkey=CDS;gene=ybfB;product=putative membrane protein;protein_id=NP_415230.1;transl_table=11 NC_000913.3 RefSeq gene 734133 735653 . + . ID=gene715;Dbxref=EcoGene:EG13661,GeneID:946124;Name=rhsO;gbkey=Gene;gene=rhsO;gene_biotype=pseudogene;gene_synonym=ECK0691,JW0692,ybfO;locus_tag=b0703;pseudo=true NC_000913.3 RefSeq CDS 734133 735653 . + 0 ID=cds690;Parent=gene715;Dbxref=ASAP:ABE-0002402,UniProtKB/Swiss-Prot:P77779,EcoGene:EG13661,GeneID:946124;Note=pseudogene%2C Rhs family;gbkey=CDS;gene=rhsO;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 735650 736219 . + . ID=gene716;Dbxref=EcoGene:EG11523,GeneID:947288;Name=ybfC;gbkey=Gene;gene=ybfC;gene_biotype=protein_coding;gene_synonym=ECK0692,JW0693;locus_tag=b0704 NC_000913.3 RefSeq CDS 735650 736219 . + 0 ID=cds691;Parent=gene716;Dbxref=ASAP:ABE-0002404,UniProtKB/Swiss-Prot:P28915,Genbank:NP_415232.1,EcoGene:EG11523,GeneID:947288;Name=NP_415232.1;gbkey=CDS;gene=ybfC;product=putative secreted protein;protein_id=NP_415232.1;transl_table=11 NC_000913.3 RefSeq gene 736445 736684 . + . ID=gene717;Dbxref=EcoGene:EG14419,GeneID:1450245;Name=ybfQ;gbkey=Gene;gene=ybfQ;gene_biotype=pseudogene;gene_synonym=ECK4474;locus_tag=b4514;pseudo=true NC_000913.3 RefSeq CDS 736445 736684 . + 0 ID=cds692;Parent=gene717;Dbxref=ASAP:ABE-0285035,UniProtKB/Swiss-Prot:Q2EEQ8,EcoGene:EG14419,GeneID:1450245;Note=pseudogene%2C H repeat-associated protein;gbkey=CDS;gene=ybfQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 736825 737961 . + . ID=gene718;Dbxref=EcoGene:EG13417,GeneID:947075;Name=ybfL;gbkey=Gene;gene=ybfL;gene_biotype=pseudogene;gene_synonym=ECK0694,JW0695;locus_tag=b0705;pseudo=true NC_000913.3 RefSeq CDS 736825 737961 . + 0 ID=cds693;Parent=gene718;Dbxref=ASAP:ABE-0002407,UniProtKB/Swiss-Prot:P75741,EcoGene:EG13417,GeneID:947075;Note=pseudogene%2C DDE domain transposase family%3Bputative factor%3B Not classified~putative receptor protein;gbkey=CDS;gene=ybfL;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 738092 738853 . + . ID=gene719;Dbxref=EcoGene:EG11524,GeneID:945176;Name=ybfD;gbkey=Gene;gene=ybfD;gene_biotype=protein_coding;gene_synonym=ECK0695,JW0696;locus_tag=b0706 NC_000913.3 RefSeq CDS 738092 738853 . + 0 ID=cds694;Parent=gene719;Dbxref=ASAP:ABE-0002411,UniProtKB/Swiss-Prot:P28916,Genbank:NP_415234.1,EcoGene:EG11524,GeneID:945176;Name=NP_415234.1;Note=putative DNA ligase;gbkey=CDS;gene=ybfD;product=H repeat-associated putative transposase;protein_id=NP_415234.1;transl_table=11 NC_000913.3 RefSeq gene 739001 739510 . + . ID=gene720;Dbxref=EcoGene:EG11108,GeneID:944853;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;gene_synonym=ECK0696,JW0697,tkp;locus_tag=b0707 NC_000913.3 RefSeq CDS 739001 739510 . + 0 ID=cds695;Parent=gene720;Dbxref=ASAP:ABE-0002414,UniProtKB/Swiss-Prot:P24252,Genbank:NP_415235.1,EcoGene:EG11108,GeneID:944853;Name=NP_415235.1;gbkey=CDS;gene=ybgA;product=DUF1722 family protein;protein_id=NP_415235.1;transl_table=11 NC_000913.3 RefSeq gene 739507 740925 . + . ID=gene721;Dbxref=EcoGene:EG10736,GeneID:947005;Name=phr;gbkey=Gene;gene=phr;gene_biotype=protein_coding;gene_synonym=ECK0697,JW0698,phrB;locus_tag=b0708 NC_000913.3 RefSeq CDS 739507 740925 . + 0 ID=cds696;Parent=gene721;Dbxref=ASAP:ABE-0002417,UniProtKB/Swiss-Prot:P00914,Genbank:NP_415236.1,EcoGene:EG10736,GeneID:947005;Name=NP_415236.1;Note=deoxyribodipyrimidine photolyase (photoreactivation);gbkey=CDS;gene=phr;product=deoxyribodipyrimidine photolyase%2C FAD-binding;protein_id=NP_415236.1;transl_table=11 NC_000913.3 RefSeq repeat_region 740954 741059 . + . ID=id110;Note=RIP66 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 741075 742556 . - . ID=gene722;Dbxref=EcoGene:EG13304,GeneID:947368;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;gene_synonym=ECK0698,JW0699,ybgH;locus_tag=b0709 NC_000913.3 RefSeq CDS 741075 742556 . - 0 ID=cds697;Parent=gene722;Dbxref=ASAP:ABE-0002420,UniProtKB/Swiss-Prot:P75742,Genbank:NP_415237.1,EcoGene:EG13304,GeneID:947368;Name=NP_415237.1;Note=putative transport protein;gbkey=CDS;gene=dtpD;product=dipeptide and tripeptide permease D;protein_id=NP_415237.1;transl_table=11 NC_000913.3 RefSeq gene 742827 743570 . + . ID=gene723;Dbxref=EcoGene:EG13305,GeneID:945824;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;gene_synonym=ECK0699,JW0700;locus_tag=b0710 NC_000913.3 RefSeq CDS 742827 743570 . + 0 ID=cds698;Parent=gene723;Dbxref=ASAP:ABE-0002424,UniProtKB/Swiss-Prot:P0AFP6,Genbank:NP_415238.1,EcoGene:EG13305,GeneID:945824;Name=NP_415238.1;gbkey=CDS;gene=ybgI;product=NIF3 family metal-binding protein;protein_id=NP_415238.1;transl_table=11 NC_000913.3 RefSeq gene 743593 744249 . + . ID=gene724;Dbxref=EcoGene:EG13306,GeneID:945311;Name=ybgJ;gbkey=Gene;gene=ybgJ;gene_biotype=protein_coding;gene_synonym=ECK0700,JW0701;locus_tag=b0711 NC_000913.3 RefSeq CDS 743593 744249 . + 0 ID=cds699;Parent=gene724;Dbxref=ASAP:ABE-0002426,UniProtKB/Swiss-Prot:P0AAV4,Genbank:NP_415239.1,EcoGene:EG13306,GeneID:945311;Name=NP_415239.1;Note=putative carboxylase;gbkey=CDS;gene=ybgJ;product=putative allophanate hydrolase%2C subunit 1;protein_id=NP_415239.1;transl_table=11 NC_000913.3 RefSeq gene 744243 745175 . + . ID=gene725;Dbxref=EcoGene:EG13307,GeneID:945317;Name=ybgK;gbkey=Gene;gene=ybgK;gene_biotype=protein_coding;gene_synonym=ECK0701,JW0702;locus_tag=b0712 NC_000913.3 RefSeq CDS 744243 745175 . + 0 ID=cds700;Parent=gene725;Dbxref=ASAP:ABE-0002428,UniProtKB/Swiss-Prot:P75745,Genbank:NP_415240.1,EcoGene:EG13307,GeneID:945317;Name=NP_415240.1;Note=putative carboxylase;gbkey=CDS;gene=ybgK;product=putative allophanate hydrolase%2C subunit 2;protein_id=NP_415240.1;transl_table=11 NC_000913.3 RefSeq gene 745165 745899 . + . ID=gene726;Dbxref=EcoGene:EG13308,GeneID:945318;Name=ybgL;gbkey=Gene;gene=ybgL;gene_biotype=protein_coding;gene_synonym=ECK0702,JW0703;locus_tag=b0713 NC_000913.3 RefSeq CDS 745165 745899 . + 0 ID=cds701;Parent=gene726;Dbxref=ASAP:ABE-0002431,UniProtKB/Swiss-Prot:P75746,Genbank:NP_415241.1,EcoGene:EG13308,GeneID:945318;Name=NP_415241.1;Note=putative lactam utilization protein;gbkey=CDS;gene=ybgL;product=UPF0271 family protein;protein_id=NP_415241.1;transl_table=11 NC_000913.3 RefSeq gene 745935 746726 . + . ID=gene727;Dbxref=EcoGene:EG13237,GeneID:945320;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;gene_synonym=ECK0703,JW0704;locus_tag=b0714 NC_000913.3 RefSeq CDS 745935 746726 . + 0 ID=cds702;Parent=gene727;Dbxref=ASAP:ABE-0002433,UniProtKB/Swiss-Prot:P50465,Genbank:NP_415242.1,EcoGene:EG13237,GeneID:945320;Name=NP_415242.1;Note=endonuclease VIII and DNA N-glycosylase with an AP lyase activity;gbkey=CDS;gene=nei;product=endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase;protein_id=NP_415242.1;transl_table=11 NC_000913.3 RefSeq gene 746723 747769 . - . ID=gene728;Dbxref=EcoGene:EG13310,GeneID:945321;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;gene_synonym=ECK0704,JW5097,ybgN;locus_tag=b0715 NC_000913.3 RefSeq CDS 746723 747769 . - 0 ID=cds703;Parent=gene728;Dbxref=ASAP:ABE-0002435,UniProtKB/Swiss-Prot:P75747,Genbank:NP_415243.4,EcoGene:EG13310,GeneID:945321;Name=NP_415243.4;Note=putative transport protein;gbkey=CDS;gene=abrB;product=regulator of aidB expression%3B inner membrane protein;protein_id=NP_415243.4;transl_table=11 NC_000913.3 RefSeq gene 747921 748982 . - . ID=gene729;Dbxref=EcoGene:EG13311,GeneID:947550;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;gene_synonym=ECK0705,JW5098;locus_tag=b0716 NC_000913.3 RefSeq CDS 747921 748982 . - 0 ID=cds704;Parent=gene729;Dbxref=ASAP:ABE-0002441,UniProtKB/Swiss-Prot:P75748,Genbank:NP_415244.4,EcoGene:EG13311,GeneID:947550;Name=NP_415244.4;gbkey=CDS;gene=ybgO;product=putative fimbrial protein;protein_id=NP_415244.4;transl_table=11 NC_000913.3 RefSeq gene 748979 749707 . - . ID=gene730;Dbxref=EcoGene:EG13312,GeneID:945110;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;gene_synonym=ECK0706,JW0707;locus_tag=b0717 NC_000913.3 RefSeq CDS 748979 749707 . - 0 ID=cds705;Parent=gene730;Dbxref=ASAP:ABE-0002443,UniProtKB/Swiss-Prot:P75749,Genbank:NP_415245.1,EcoGene:EG13312,GeneID:945110;Name=NP_415245.1;Note=putative chaperone;gbkey=CDS;gene=ybgP;product=putative periplasmic pilin chaperone;protein_id=NP_415245.1;transl_table=11 NC_000913.3 RefSeq gene 749722 752169 . - . ID=gene731;Dbxref=EcoGene:EG13313,GeneID:946537;Name=ybgQ;gbkey=Gene;gene=ybgQ;gene_biotype=protein_coding;gene_synonym=ECK0707,JW5099;locus_tag=b0718 NC_000913.3 RefSeq CDS 749722 752169 . - 0 ID=cds706;Parent=gene731;Dbxref=ASAP:ABE-0002446,UniProtKB/Swiss-Prot:P75750,Genbank:NP_415246.2,EcoGene:EG13313,GeneID:946537;Name=NP_415246.2;Note=putative outer membrane protein;gbkey=CDS;gene=ybgQ;product=putative outer membrane protein;protein_id=NP_415246.2;transl_table=11 NC_000913.3 RefSeq gene 752229 752795 . - . ID=gene732;Dbxref=EcoGene:EG12359,GeneID:945325;Name=ybgD;gbkey=Gene;gene=ybgD;gene_biotype=protein_coding;gene_synonym=ECK0708,JW0709;locus_tag=b0719 NC_000913.3 RefSeq CDS 752229 752795 . - 0 ID=cds707;Parent=gene732;Dbxref=ASAP:ABE-0002448,UniProtKB/Swiss-Prot:P37909,Genbank:NP_415247.1,EcoGene:EG12359,GeneID:945325;Name=NP_415247.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=ybgD;product=putative fimbrial-like adhesin protein;protein_id=NP_415247.1;transl_table=11 NC_000913.3 RefSeq gene 753185 754468 . - . ID=gene733;Dbxref=EcoGene:EG10402,GeneID:945323;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;gene_synonym=ECK0709,gluT,icdB,JW0710;locus_tag=b0720 NC_000913.3 RefSeq CDS 753185 754468 . - 0 ID=cds708;Parent=gene733;Dbxref=ASAP:ABE-0002451,UniProtKB/Swiss-Prot:P0ABH7,Genbank:NP_415248.1,EcoGene:EG10402,GeneID:945323;Name=NP_415248.1;gbkey=CDS;gene=gltA;product=citrate synthase;protein_id=NP_415248.1;transl_table=11 NC_000913.3 RefSeq gene 755177 755566 . + . ID=gene734;Dbxref=EcoGene:EG10933,GeneID:945316;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,ECK0710,JW0711;locus_tag=b0721 NC_000913.3 RefSeq CDS 755177 755566 . + 0 ID=cds709;Parent=gene734;Dbxref=ASAP:ABE-0002460,UniProtKB/Swiss-Prot:P69054,Genbank:NP_415249.1,EcoGene:EG10933,GeneID:945316;Name=NP_415249.1;Note=succinate dehydrogenase%2C cytochrome b556;gbkey=CDS;gene=sdhC;product=succinate dehydrogenase%2C membrane subunit%2C binds cytochrome b556;protein_id=NP_415249.1;transl_table=11 NC_000913.3 RefSeq gene 755560 755907 . + . ID=gene735;Dbxref=EcoGene:EG10934,GeneID:945322;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=ECK0711,JW0712;locus_tag=b0722 NC_000913.3 RefSeq CDS 755560 755907 . + 0 ID=cds710;Parent=gene735;Dbxref=ASAP:ABE-0002464,UniProtKB/Swiss-Prot:P0AC44,Genbank:NP_415250.1,EcoGene:EG10934,GeneID:945322;Name=NP_415250.1;Note=succinate dehydrogenase%2C hydrophobic subunit;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase%2C membrane subunit%2C binds cytochrome b556;protein_id=NP_415250.1;transl_table=11 NC_000913.3 RefSeq gene 755907 757673 . + . ID=gene736;Dbxref=EcoGene:EG10931,GeneID:945402;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;gene_synonym=ECK0712,JW0713;locus_tag=b0723 NC_000913.3 RefSeq CDS 755907 757673 . + 0 ID=cds711;Parent=gene736;Dbxref=ASAP:ABE-0002466,UniProtKB/Swiss-Prot:P0AC41,Genbank:NP_415251.1,EcoGene:EG10931,GeneID:945402;Name=NP_415251.1;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase%2C flavoprotein subunit;protein_id=NP_415251.1;transl_table=11 NC_000913.3 RefSeq gene 757689 758405 . + . ID=gene737;Dbxref=EcoGene:EG10932,GeneID:945300;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;gene_synonym=ECK0713,JW0714;locus_tag=b0724 NC_000913.3 RefSeq CDS 757689 758405 . + 0 ID=cds712;Parent=gene737;Dbxref=ASAP:ABE-0002468,UniProtKB/Swiss-Prot:P07014,Genbank:NP_415252.1,EcoGene:EG10932,GeneID:945300;Name=NP_415252.1;Note=succinate dehydrogenase%2C iron sulfur protein;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase%2C FeS subunit;protein_id=NP_415252.1;transl_table=11 NC_000913.3 RefSeq repeat_region 758409 758526 . + . ID=id111;Note=RIP67 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 758706 761507 . + . ID=gene738;Dbxref=EcoGene:EG10979,GeneID:945303;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;gene_synonym=ECK0714,JW0715,lys;locus_tag=b0726 NC_000913.3 RefSeq CDS 758706 761507 . + 0 ID=cds713;Parent=gene738;Dbxref=ASAP:ABE-0002478,UniProtKB/Swiss-Prot:P0AFG3,Genbank:NP_415254.1,EcoGene:EG10979,GeneID:945303;Name=NP_415254.1;Note=2-oxoglutarate dehydrogenase (decarboxylase component);gbkey=CDS;gene=sucA;product=2-oxoglutarate decarboxylase%2C thiamine triphosphate-binding;protein_id=NP_415254.1;transl_table=11 NC_000913.3 RefSeq gene 761522 762739 . + . ID=gene739;Dbxref=EcoGene:EG10980,GeneID:945307;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;gene_synonym=ECK0715,JW0716;locus_tag=b0727 NC_000913.3 RefSeq CDS 761522 762739 . + 0 ID=cds714;Parent=gene739;Dbxref=ASAP:ABE-0002480,UniProtKB/Swiss-Prot:P0AFG6,Genbank:NP_415255.1,EcoGene:EG10980,GeneID:945307;Name=NP_415255.1;Note=2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component);gbkey=CDS;gene=sucB;product=dihydrolipoyltranssuccinase;protein_id=NP_415255.1;transl_table=11 NC_000913.3 RefSeq repeat_region 762762 762928 . + . ID=id112;Note=REP68 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 763014 764180 . + . ID=gene740;Dbxref=EcoGene:EG10981,GeneID:945312;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;gene_synonym=ECK0716,JW0717;locus_tag=b0728 NC_000913.3 RefSeq CDS 763014 764180 . + 0 ID=cds715;Parent=gene740;Dbxref=ASAP:ABE-0002483,UniProtKB/Swiss-Prot:P0A836,Genbank:NP_415256.1,EcoGene:EG10981,GeneID:945312;Name=NP_415256.1;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase%2C beta subunit;protein_id=NP_415256.1;transl_table=11 NC_000913.3 RefSeq gene 764180 765049 . + . ID=gene741;Dbxref=EcoGene:EG10982,GeneID:945314;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;gene_synonym=ECK0717,JW0718;locus_tag=b0729 NC_000913.3 RefSeq CDS 764180 765049 . + 0 ID=cds716;Parent=gene741;Dbxref=ASAP:ABE-0002485,UniProtKB/Swiss-Prot:P0AGE9,Genbank:NP_415257.1,EcoGene:EG10982,GeneID:945314;Name=NP_415257.1;Note=succinyl-CoA synthetase%2C alpha subunit;gbkey=CDS;gene=sucD;product=succinyl-CoA synthetase%2C NAD(P)-binding%2C alpha subunit;protein_id=NP_415257.1;transl_table=11 NC_000913.3 RefSeq gene 765153 765875 . - . ID=gene742;Dbxref=EcoGene:EG11109,GeneID:945371;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;gene_synonym=ECK0718,farR,JW0719,ybgB;locus_tag=b0730 NC_000913.3 RefSeq CDS 765153 765875 . - 0 ID=cds717;Parent=gene742;Dbxref=ASAP:ABE-0002487,UniProtKB/Swiss-Prot:P13669,Genbank:NP_415258.1,EcoGene:EG11109,GeneID:945371;Name=NP_415258.1;Note=transcriptional regulator of succinylCoA synthetase operon;gbkey=CDS;gene=mngR;product=transcriptional repressor for the mannosyl-D-glycerate catabolic operon;protein_id=NP_415258.1;transl_table=11 NC_000913.3 RefSeq gene 765984 767960 . + . ID=gene743;Dbxref=EcoGene:EG13235,GeneID:945355;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;gene_synonym=ECK0719,hrsA,JW0720;locus_tag=b0731 NC_000913.3 RefSeq CDS 765984 767960 . + 0 ID=cds718;Parent=gene743;Dbxref=ASAP:ABE-0002493,UniProtKB/Swiss-Prot:P54745,Genbank:NP_415259.1,EcoGene:EG13235,GeneID:945355;Name=NP_415259.1;Note=protein modification enzyme%2C induction of ompC;gbkey=CDS;gene=mngA;product=fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component;protein_id=NP_415259.1;transl_table=11 NC_000913.3 RefSeq gene 767978 770611 . + . ID=gene744;Dbxref=EcoGene:EG13236,GeneID:945359;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;gene_synonym=ECK0720,JW0721,ybgG;locus_tag=b0732 NC_000913.3 RefSeq CDS 767978 770611 . + 0 ID=cds719;Parent=gene744;Dbxref=ASAP:ABE-0002495,UniProtKB/Swiss-Prot:P54746,Genbank:NP_415260.1,EcoGene:EG13236,GeneID:945359;Name=NP_415260.1;Note=putative sugar hydrolase;gbkey=CDS;gene=mngB;product=alpha-mannosidase;protein_id=NP_415260.1;transl_table=11 NC_000913.3 RefSeq repeat_region 770675 770773 . + . ID=id113;Note=RIP69 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 771458 773026 . + . ID=gene745;Dbxref=EcoGene:EG10173,GeneID:945341;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;gene_synonym=ECK0721,JW0722;locus_tag=b0733 NC_000913.3 RefSeq CDS 771458 773026 . + 0 ID=cds720;Parent=gene745;Dbxref=ASAP:ABE-0002499,UniProtKB/Swiss-Prot:P0ABJ9,Genbank:NP_415261.2,EcoGene:EG10173,GeneID:945341;Name=NP_415261.2;Note=cytochrome d terminal oxidase%2C polypeptide subunit I;gbkey=CDS;gene=cydA;product=cytochrome d terminal oxidase%2C subunit I;protein_id=NP_415261.2;transl_table=11 NC_000913.3 RefSeq gene 773042 774181 . + . ID=gene746;Dbxref=EcoGene:EG10174,GeneID:945347;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;gene_synonym=ECK0722,JW0723;locus_tag=b0734 NC_000913.3 RefSeq CDS 773042 774181 . + 0 ID=cds721;Parent=gene746;Dbxref=ASAP:ABE-0002501,UniProtKB/Swiss-Prot:P0ABK2,Genbank:NP_415262.1,EcoGene:EG10174,GeneID:945347;Name=NP_415262.1;Note=cytochrome d terminal oxidase polypeptide subunit II;gbkey=CDS;gene=cydB;product=cytochrome d terminal oxidase%2C subunit II;protein_id=NP_415262.1;transl_table=11 NC_000913.3 RefSeq gene 774196 774309 . + . ID=gene747;Dbxref=EcoGene:EG14329,GeneID:1450246;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ECK0723,JW0724,ybgT;locus_tag=b4515 NC_000913.3 RefSeq CDS 774196 774309 . + 0 ID=cds722;Parent=gene747;Dbxref=ASAP:ABE-0285036,UniProtKB/Swiss-Prot:P56100,Genbank:YP_588444.1,EcoGene:EG14329,GeneID:1450246;Name=YP_588444.1;gbkey=CDS;gene=cydX;product=cytochrome d (bd-I) ubiquinol oxidase subunit X;protein_id=YP_588444.1;transl_table=11 NC_000913.3 RefSeq gene 774309 774602 . + . ID=gene748;Dbxref=EcoGene:EG12395,GeneID:945326;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;gene_synonym=ECK0724,JW0725;locus_tag=b0735 NC_000913.3 RefSeq CDS 774309 774602 . + 0 ID=cds723;Parent=gene748;Dbxref=ASAP:ABE-0002505,UniProtKB/Swiss-Prot:P0AAV0,Genbank:NP_415263.1,EcoGene:EG12395,GeneID:945326;Name=NP_415263.1;gbkey=CDS;gene=ybgE;product=putative inner membrane protein in cydABX-ybgE operon;protein_id=NP_415263.1;transl_table=11 NC_000913.3 RefSeq gene 774752 775156 . + . ID=gene749;Dbxref=EcoGene:EG11110,GeneID:948907;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;gene_synonym=ECK0725,JW0726;locus_tag=b0736 NC_000913.3 RefSeq CDS 774752 775156 . + 0 ID=cds724;Parent=gene749;Dbxref=ASAP:ABE-0002508,UniProtKB/Swiss-Prot:P0A8Z3,Genbank:NP_415264.1,EcoGene:EG11110,GeneID:948907;Name=NP_415264.1;gbkey=CDS;gene=ybgC;product=acyl-CoA thioester hydrolase;protein_id=NP_415264.1;transl_table=11 NC_000913.3 RefSeq gene 775153 775845 . + . ID=gene750;Dbxref=EcoGene:EG11010,GeneID:948900;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;gene_synonym=ECK0726,fii,JW0727,tolP;locus_tag=b0737 NC_000913.3 RefSeq CDS 775153 775845 . + 0 ID=cds725;Parent=gene750;Dbxref=ASAP:ABE-0002511,UniProtKB/Swiss-Prot:P0ABU9,Genbank:NP_415265.1,EcoGene:EG11010,GeneID:948900;Name=NP_415265.1;Note=inner membrane protein%2C membrane-spanning%2C maintains integrity of cell envelope%3B tolerance to group A colicins;gbkey=CDS;gene=tolQ;product=membrane spanning protein in TolA-TolQ-TolR complex;protein_id=NP_415265.1;transl_table=11 NC_000913.3 RefSeq gene 775849 776277 . + . ID=gene751;Dbxref=EcoGene:EG11011,GeneID:945328;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;gene_synonym=ECK0727,JW0728;locus_tag=b0738 NC_000913.3 RefSeq CDS 775849 776277 . + 0 ID=cds726;Parent=gene751;Dbxref=ASAP:ABE-0002513,UniProtKB/Swiss-Prot:P0ABV6,Genbank:NP_415266.1,EcoGene:EG11011,GeneID:945328;Name=NP_415266.1;Note=putative inner membrane protein%2C involved in the tonB-independent uptake of group A colicins;gbkey=CDS;gene=tolR;product=membrane spanning protein in TolA-TolQ-TolR complex;protein_id=NP_415266.1;transl_table=11 NC_000913.3 RefSeq gene 776342 777607 . + . ID=gene752;Dbxref=EcoGene:EG11007,GeneID:946625;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;gene_synonym=cim,ECK0728,excC,JW0729,lky;locus_tag=b0739 NC_000913.3 RefSeq CDS 776342 777607 . + 0 ID=cds727;Parent=gene752;Dbxref=ASAP:ABE-0002515,UniProtKB/Swiss-Prot:P19934,Genbank:NP_415267.1,EcoGene:EG11007,GeneID:946625;Name=NP_415267.1;Note=membrane spanning protein%2C required for outer membrane integrity;gbkey=CDS;gene=tolA;product=membrane anchored protein in TolA-TolQ-TolR complex;protein_id=NP_415267.1;transl_table=11 NC_000913.3 RefSeq gene 777740 779032 . + . ID=gene753;Dbxref=EcoGene:EG11008,GeneID:945429;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;gene_synonym=ECK0729,JW5100;locus_tag=b0740 NC_000913.3 RefSeq CDS 777740 779032 . + 0 ID=cds728;Parent=gene753;Dbxref=ASAP:ABE-0002517,UniProtKB/Swiss-Prot:P0A855,Genbank:NP_415268.1,EcoGene:EG11008,GeneID:945429;Name=NP_415268.1;Note=periplasmic protein involved in the tonb-independent uptake of group A colicins;gbkey=CDS;gene=tolB;product=periplasmic protein;protein_id=NP_415268.1;transl_table=11 NC_000913.3 RefSeq gene 779067 779588 . + . ID=gene754;Dbxref=EcoGene:EG10684,GeneID:945004;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;gene_synonym=ECK0730,excC,JW0731;locus_tag=b0741 NC_000913.3 RefSeq CDS 779067 779588 . + 0 ID=cds729;Parent=gene754;Dbxref=ASAP:ABE-0002521,UniProtKB/Swiss-Prot:P0A912,Genbank:NP_415269.1,EcoGene:EG10684,GeneID:945004;Name=NP_415269.1;Note=peptidoglycan-associated lipoprotein;gbkey=CDS;gene=pal;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=NP_415269.1;transl_table=11 NC_000913.3 RefSeq gene 779598 780389 . + . ID=gene755;Dbxref=EcoGene:EG12854,GeneID:947227;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;gene_synonym=ECK0731,JW0732;locus_tag=b0742 NC_000913.3 RefSeq CDS 779598 780389 . + 0 ID=cds730;Parent=gene755;Dbxref=ASAP:ABE-0002523,UniProtKB/Swiss-Prot:P45955,Genbank:NP_415270.1,EcoGene:EG12854,GeneID:947227;Name=NP_415270.1;gbkey=CDS;gene=ybgF;product=periplasmic TolA-binding protein;protein_id=NP_415270.1;transl_table=11 NC_000913.3 RefSeq gene 780554 780629 . + . ID=gene756;Dbxref=EcoGene:EG30055,GeneID:945336;Name=lysT;gbkey=Gene;gene=lysT;gene_biotype=tRNA;gene_synonym=ECK0732,JWR0018,lysTalpha,sua,supG,supL;locus_tag=b0743 NC_000913.3 RefSeq tRNA 780554 780629 . + . ID=rna25;Parent=gene756;Dbxref=ASAP:ABE-0002525,EcoGene:EG30055,GeneID:945336;Note=anticodon: UUU;gbkey=tRNA;gene=lysT;product=tRNA-Lys NC_000913.3 RefSeq exon 780554 780629 . + . ID=id114;Parent=rna25;Dbxref=ASAP:ABE-0002525,EcoGene:EG30055,GeneID:945336;Note=anticodon: UUU;gbkey=tRNA;gene=lysT;product=tRNA-Lys NC_000913.3 RefSeq gene 780765 780840 . + . ID=gene757;Dbxref=EcoGene:EG30109,GeneID:945331;Name=valT;gbkey=Gene;gene=valT;gene_biotype=tRNA;gene_synonym=ECK0733,JWR0019;locus_tag=b0744 NC_000913.3 RefSeq tRNA 780765 780840 . + . ID=rna26;Parent=gene757;Dbxref=ASAP:ABE-0002527,EcoGene:EG30109,GeneID:945331;Note=anticodon: UAC;gbkey=tRNA;gene=valT;product=tRNA-Val NC_000913.3 RefSeq exon 780765 780840 . + . ID=id115;Parent=rna26;Dbxref=ASAP:ABE-0002527,EcoGene:EG30109,GeneID:945331;Note=anticodon: UAC;gbkey=tRNA;gene=valT;product=tRNA-Val NC_000913.3 RefSeq gene 780843 780918 . + . ID=gene758;Dbxref=EcoGene:EG30057,GeneID:945338;Name=lysW;gbkey=Gene;gene=lysW;gene_biotype=tRNA;gene_synonym=ECK0734,JWR0020,lysTbeta,su;locus_tag=b0745 NC_000913.3 RefSeq tRNA 780843 780918 . + . ID=rna27;Parent=gene758;Dbxref=ASAP:ABE-0002529,EcoGene:EG30057,GeneID:945338;Note=anticodon: UUU;gbkey=tRNA;gene=lysW;product=tRNA-Lys NC_000913.3 RefSeq exon 780843 780918 . + . ID=id116;Parent=rna27;Dbxref=ASAP:ABE-0002529,EcoGene:EG30057,GeneID:945338;Note=anticodon: UUU;gbkey=tRNA;gene=lysW;product=tRNA-Lys NC_000913.3 RefSeq gene 781068 781143 . + . ID=gene759;Dbxref=EcoGene:EG31125,GeneID:945345;Name=valZ;gbkey=Gene;gene=valZ;gene_biotype=tRNA;gene_synonym=ECK0735,JWR0021;locus_tag=b0746 NC_000913.3 RefSeq tRNA 781068 781143 . + . ID=rna28;Parent=gene759;Dbxref=ASAP:ABE-0002531,EcoGene:EG31125,GeneID:945345;Note=anticodon: UAC;gbkey=tRNA;gene=valZ;product=tRNA-Val NC_000913.3 RefSeq exon 781068 781143 . + . ID=id117;Parent=rna28;Dbxref=ASAP:ABE-0002531,EcoGene:EG31125,GeneID:945345;Note=anticodon: UAC;gbkey=tRNA;gene=valZ;product=tRNA-Val NC_000913.3 RefSeq gene 781147 781222 . + . ID=gene760;Dbxref=EcoGene:EG31123,GeneID:945342;Name=lysY;gbkey=Gene;gene=lysY;gene_biotype=tRNA;gene_synonym=ECK0736,JWR0022;locus_tag=b0747 NC_000913.3 RefSeq tRNA 781147 781222 . + . ID=rna29;Parent=gene760;Dbxref=ASAP:ABE-0002533,EcoGene:EG31123,GeneID:945342;Note=anticodon: UUU;gbkey=tRNA;gene=lysY;product=tRNA-Lys NC_000913.3 RefSeq exon 781147 781222 . + . ID=id118;Parent=rna29;Dbxref=ASAP:ABE-0002533,EcoGene:EG31123,GeneID:945342;Note=anticodon: UUU;gbkey=tRNA;gene=lysY;product=tRNA-Lys NC_000913.3 RefSeq gene 781369 781444 . + . ID=gene761;Dbxref=EcoGene:EG31124,GeneID:945352;Name=lysZ;gbkey=Gene;gene=lysZ;gene_biotype=tRNA;gene_synonym=ECK0737,JWR0023;locus_tag=b0748 NC_000913.3 RefSeq tRNA 781369 781444 . + . ID=rna30;Parent=gene761;Dbxref=ASAP:ABE-0002535,EcoGene:EG31124,GeneID:945352;Note=anticodon: UUU;gbkey=tRNA;gene=lysZ;product=tRNA-Lys NC_000913.3 RefSeq exon 781369 781444 . + . ID=id119;Parent=rna30;Dbxref=ASAP:ABE-0002535,EcoGene:EG31124,GeneID:945352;Note=anticodon: UUU;gbkey=tRNA;gene=lysZ;product=tRNA-Lys NC_000913.3 RefSeq gene 781577 781652 . + . ID=gene762;Dbxref=EcoGene:EG31122,GeneID:945353;Name=lysQ;gbkey=Gene;gene=lysQ;gene_biotype=tRNA;gene_synonym=ECK0738,JWR0024;locus_tag=b0749 NC_000913.3 RefSeq tRNA 781577 781652 . + . ID=rna31;Parent=gene762;Dbxref=ASAP:ABE-0002537,EcoGene:EG31122,GeneID:945353;Note=anticodon: UUU;gbkey=tRNA;gene=lysQ;product=tRNA-Lys NC_000913.3 RefSeq exon 781577 781652 . + . ID=id120;Parent=rna31;Dbxref=ASAP:ABE-0002537,EcoGene:EG31122,GeneID:945353;Note=anticodon: UUU;gbkey=tRNA;gene=lysQ;product=tRNA-Lys NC_000913.3 RefSeq gene 782085 783128 . + . ID=gene763;Dbxref=EcoGene:EG10630,GeneID:945351;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;gene_synonym=ECK0739,JW0733,nicA;locus_tag=b0750 NC_000913.3 RefSeq CDS 782085 783128 . + 0 ID=cds731;Parent=gene763;Dbxref=ASAP:ABE-0002541,UniProtKB/Swiss-Prot:P11458,Genbank:NP_415271.1,EcoGene:EG10630,GeneID:945351;Name=NP_415271.1;Note=quinolinate synthetase%2C A protein;gbkey=CDS;gene=nadA;product=quinolinate synthase%2C subunit A;protein_id=NP_415271.1;transl_table=11 NC_000913.3 RefSeq gene 783166 783885 . + . ID=gene764;Dbxref=EcoGene:EG11700,GeneID:945350;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;gene_synonym=ECK0740,JW0734;locus_tag=b0751 NC_000913.3 RefSeq CDS 783166 783885 . + 0 ID=cds732;Parent=gene764;Dbxref=ASAP:ABE-0002547,UniProtKB/Swiss-Prot:P0AFK2,Genbank:NP_415272.1,EcoGene:EG11700,GeneID:945350;Name=NP_415272.1;Note=required for NMN transport;gbkey=CDS;gene=pnuC;product=nicotinamide riboside transporter;protein_id=NP_415272.1;transl_table=11 NC_000913.3 RefSeq gene 783882 784823 . - . ID=gene765;Dbxref=EcoGene:EG13662,GeneID:945348;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;gene_synonym=ECK0741,JW0735,ybgR;locus_tag=b0752 NC_000913.3 RefSeq CDS 783882 784823 . - 0 ID=cds733;Parent=gene765;Dbxref=ASAP:ABE-0002549,UniProtKB/Swiss-Prot:P75757,Genbank:NP_415273.1,EcoGene:EG13662,GeneID:945348;Name=NP_415273.1;Note=putative transport system permease protein;gbkey=CDS;gene=zitB;product=zinc efflux system;protein_id=NP_415273.1;transl_table=11 NC_000913.3 RefSeq gene 784937 785317 . - . ID=gene766;Dbxref=EcoGene:EG13663,GeneID:945356;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;gene_synonym=ECK0742,JW0736;locus_tag=b0753 NC_000913.3 RefSeq CDS 784937 785317 . - 0 ID=cds734;Parent=gene766;Dbxref=ASAP:ABE-0002553,UniProtKB/Swiss-Prot:P0AAV6,Genbank:NP_415274.1,EcoGene:EG13663,GeneID:945356;Name=NP_415274.1;Note=putative homeobox protein;gbkey=CDS;gene=ybgS;product=putative periplasmic protein;protein_id=NP_415274.1;transl_table=11 NC_000913.3 RefSeq gene 785633 786685 . + . ID=gene767;Dbxref=EcoGene:EG10079,GeneID:945605;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;gene_synonym=ECK0743,JW0737;locus_tag=b0754 NC_000913.3 RefSeq CDS 785633 786685 . + 0 ID=cds735;Parent=gene767;Dbxref=ASAP:ABE-0002560,UniProtKB/Swiss-Prot:P0AB91,Genbank:NP_415275.1,EcoGene:EG10079,GeneID:945605;Name=NP_415275.1;Note=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase%2C phenylalanine repressible);gbkey=CDS;gene=aroG;product=3-deoxy-D-arabino-heptulosonate-7-phosphate synthase%2C phenylalanine repressible;protein_id=NP_415275.1;transl_table=11 NC_000913.3 RefSeq repeat_region 786735 786769 . + . ID=id121;Note=REP70 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 786843 787595 . - . ID=gene768;Dbxref=EcoGene:EG11699,GeneID:945068;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;gene_synonym=ECK0744,gpm,JW0738;locus_tag=b0755 NC_000913.3 RefSeq CDS 786843 787595 . - 0 ID=cds736;Parent=gene768;Dbxref=ASAP:ABE-0002563,UniProtKB/Swiss-Prot:P62707,Genbank:NP_415276.1,EcoGene:EG11699,GeneID:945068;Name=NP_415276.1;gbkey=CDS;gene=gpmA;product=phosphoglyceromutase 1;protein_id=NP_415276.1;transl_table=11 NC_000913.3 RefSeq gene 787797 788837 . - . ID=gene769;Dbxref=EcoGene:EG11698,GeneID:944943;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;gene_synonym=ECK0745,JW0739;locus_tag=b0756 NC_000913.3 RefSeq CDS 787797 788837 . - 0 ID=cds737;Parent=gene769;Dbxref=ASAP:ABE-0002566,UniProtKB/Swiss-Prot:P0A9C3,Genbank:NP_415277.1,EcoGene:EG11698,GeneID:944943;Name=NP_415277.1;gbkey=CDS;gene=galM;product=aldose 1-epimerase%3B type-1 mutarotase%3B galactose mutarotase;protein_id=NP_415277.1;transl_table=11 NC_000913.3 RefSeq gene 788831 789979 . - . ID=gene770;Dbxref=EcoGene:EG10363,GeneID:945358;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;gene_synonym=ECK0746,galA,JW0740;locus_tag=b0757 NC_000913.3 RefSeq CDS 788831 789979 . - 0 ID=cds738;Parent=gene770;Dbxref=ASAP:ABE-0002568,UniProtKB/Swiss-Prot:P0A6T3,Genbank:NP_415278.1,EcoGene:EG10363,GeneID:945358;Name=NP_415278.1;gbkey=CDS;gene=galK;product=galactokinase;protein_id=NP_415278.1;transl_table=11 NC_000913.3 RefSeq gene 789983 791029 . - . ID=gene771;Dbxref=EcoGene:EG10366,GeneID:945357;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;gene_synonym=ECK0747,galB,JW0741;locus_tag=b0758 NC_000913.3 RefSeq CDS 789983 791029 . - 0 ID=cds739;Parent=gene771;Dbxref=ASAP:ABE-0002573,UniProtKB/Swiss-Prot:P09148,Genbank:NP_415279.1,EcoGene:EG10366,GeneID:945357;Name=NP_415279.1;gbkey=CDS;gene=galT;product=galactose-1-phosphate uridylyltransferase;protein_id=NP_415279.1;transl_table=11 NC_000913.3 RefSeq gene 791039 792055 . - . ID=gene772;Dbxref=EcoGene:EG10362,GeneID:945354;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;gene_synonym=ECK0748,galD,JW0742;locus_tag=b0759 NC_000913.3 RefSeq CDS 791039 792055 . - 0 ID=cds740;Parent=gene772;Dbxref=ASAP:ABE-0002575,UniProtKB/Swiss-Prot:P09147,Genbank:NP_415280.3,EcoGene:EG10362,GeneID:945354;Name=NP_415280.3;gbkey=CDS;gene=galE;product=UDP-galactose-4-epimerase;protein_id=NP_415280.3;transl_table=11 NC_000913.3 RefSeq repeat_region 792264 792297 . + . ID=id122;Note=REP71 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 792316 793788 . - . ID=gene773;Dbxref=EcoGene:EG11677,GeneID:945368;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;gene_synonym=chlD,ECK0749,JW0743,phrA;locus_tag=b0760 NC_000913.3 RefSeq CDS 792316 793788 . - 0 ID=cds741;Parent=gene773;Dbxref=ASAP:ABE-0002582,UniProtKB/Swiss-Prot:P31060,Genbank:NP_415281.1,EcoGene:EG11677,GeneID:945368;Name=NP_415281.1;Note=ATP-binding component of molybdate transport system;gbkey=CDS;gene=modF;product=molybdate ABC transporter ATPase;protein_id=NP_415281.1;transl_table=11 NC_000913.3 RefSeq gene 793856 794644 . - . ID=gene774;Dbxref=EcoGene:EG13227,GeneID:945366;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;gene_synonym=chlD,ECK0750,JW0744,modR;locus_tag=b0761 NC_000913.3 RefSeq CDS 793856 794644 . - 0 ID=cds742;Parent=gene774;Dbxref=ASAP:ABE-0002585,UniProtKB/Swiss-Prot:P0A9G8,Genbank:NP_415282.1,EcoGene:EG13227,GeneID:945366;Name=NP_415282.1;Note=molybdate uptake regulatory protein;gbkey=CDS;gene=modE;product=transcriptional repressor for the molybdenum transport operon modABC;protein_id=NP_415282.1;transl_table=11 NC_000913.3 RefSeq gene 794773 794922 . + . ID=gene775;Dbxref=EcoGene:EG14328,GeneID:945365;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;gene_synonym=ECK0751,JW5102,ybhT;locus_tag=b0762 NC_000913.3 RefSeq CDS 794773 794922 . + 0 ID=cds743;Parent=gene775;Dbxref=ASAP:ABE-0002595,UniProtKB/Swiss-Prot:P0AAW9,Genbank:NP_415283.1,EcoGene:EG14328,GeneID:945365;Name=NP_415283.1;gbkey=CDS;gene=acrZ;product=AcrAB-TolC efflux pump accessory protein%2C membrane-associated;protein_id=NP_415283.1;transl_table=11 NC_000913.3 RefSeq gene 795089 795862 . + . ID=gene776;Dbxref=EcoGene:EG12427,GeneID:945364;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;gene_synonym=ECK0752,JW0746;locus_tag=b0763 NC_000913.3 RefSeq CDS 795089 795862 . + 0 ID=cds744;Parent=gene776;Dbxref=ASAP:ABE-0002601,UniProtKB/Swiss-Prot:P37329,Genbank:NP_415284.1,EcoGene:EG12427,GeneID:945364;Name=NP_415284.1;Note=molybdate-binding periplasmic protein%3B permease%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=modA;product=molybdate ABC transporter periplasmic binding protein%3B chlorate resistance protein;protein_id=NP_415284.1;transl_table=11 NC_000913.3 RefSeq gene 795862 796551 . + . ID=gene777;Dbxref=EcoGene:EG10002,GeneID:945361;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ,ECK0753,JW0747;locus_tag=b0764 NC_000913.3 RefSeq CDS 795862 796551 . + 0 ID=cds745;Parent=gene777;Dbxref=ASAP:ABE-0002603,UniProtKB/Swiss-Prot:P0AF01,Genbank:NP_415285.1,EcoGene:EG10002,GeneID:945361;Name=NP_415285.1;Note=molybdate transport permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease%3B chlorate resistance protein;protein_id=NP_415285.1;transl_table=11 NC_000913.3 RefSeq gene 796554 797612 . + . ID=gene778;Dbxref=EcoGene:EG10152,GeneID:945362;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;gene_synonym=chlD,ECK0754,JW0748,narD;locus_tag=b0765 NC_000913.3 RefSeq CDS 796554 797612 . + 0 ID=cds746;Parent=gene778;Dbxref=ASAP:ABE-0002605,UniProtKB/Swiss-Prot:P09833,Genbank:NP_415286.1,EcoGene:EG10152,GeneID:945362;Name=NP_415286.1;Note=ATP-binding component of molybdate transport;gbkey=CDS;gene=modC;product=molybdate ABC transporter ATPase%3B chlorate resistance protein;protein_id=NP_415286.1;transl_table=11 NC_000913.3 RefSeq gene 797613 798431 . - . ID=gene779;Dbxref=EcoGene:EG11239,GeneID:945372;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;gene_synonym=ECK0755,JW0749,modD;locus_tag=b0766 NC_000913.3 RefSeq CDS 797613 798431 . - 0 ID=cds747;Parent=gene779;Dbxref=ASAP:ABE-0002607,UniProtKB/Swiss-Prot:P21829,Genbank:NP_415287.1,EcoGene:EG11239,GeneID:945372;Name=NP_415287.1;Note=putative phosphatase;gbkey=CDS;gene=ybhA;product=pyridoxal phosphate (PLP) phosphatase;protein_id=NP_415287.1;transl_table=11 NC_000913.3 RefSeq gene 798586 799581 . + . ID=gene780;Dbxref=EcoGene:EG13231,GeneID:946398;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=blu,ECK0756,JW0750,ybhE;locus_tag=b0767 NC_000913.3 RefSeq CDS 798586 799581 . + 0 ID=cds748;Parent=gene780;Dbxref=ASAP:ABE-0002611,UniProtKB/Swiss-Prot:P52697,Genbank:NP_415288.1,EcoGene:EG13231,GeneID:946398;Name=NP_415288.1;Note=putative isomerase;gbkey=CDS;gene=pgl;product=6-phosphogluconolactonase;protein_id=NP_415288.1;transl_table=11 NC_000913.3 RefSeq gene 799622 800575 . - . ID=gene781;Dbxref=EcoGene:EG13230,GeneID:944869;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;gene_synonym=ECK0757,JW5896;locus_tag=b0768 NC_000913.3 RefSeq CDS 799622 800575 . - 0 ID=cds749;Parent=gene781;Dbxref=ASAP:ABE-0002613,UniProtKB/Swiss-Prot:P52696,Genbank:NP_415289.4,EcoGene:EG13230,GeneID:944869;Name=NP_415289.4;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ybhD;product=putative DNA-binding transcriptional regulator;protein_id=NP_415289.4;transl_table=11 NC_000913.3 RefSeq gene 800759 801811 . + . ID=gene782;Dbxref=EcoGene:EG13664,GeneID:945375;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;gene_synonym=ECK0758,JW0752;locus_tag=b0769 NC_000913.3 RefSeq CDS 800759 801811 . + 0 ID=cds750;Parent=gene782;Dbxref=ASAP:ABE-0002618,UniProtKB/Swiss-Prot:P0AAV8,Genbank:NP_415290.1,EcoGene:EG13664,GeneID:945375;Name=NP_415290.1;gbkey=CDS;gene=ybhH;product=putative PrpF family isomerase;protein_id=NP_415290.1;transl_table=11 NC_000913.3 RefSeq gene 801887 803320 . + . ID=gene783;Dbxref=EcoGene:EG13665,GeneID:945377;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=protein_coding;gene_synonym=ECK0759,JW0753;locus_tag=b0770 NC_000913.3 RefSeq CDS 801887 803320 . + 0 ID=cds751;Parent=gene783;Dbxref=ASAP:ABE-0002621,UniProtKB/Swiss-Prot:P75763,Genbank:NP_415291.1,EcoGene:EG13665,GeneID:945377;Name=NP_415291.1;Note=putative membrane pump protein;gbkey=CDS;gene=ybhI;product=putative DASS family tricarboxylate or dicarboxylate transporter;protein_id=NP_415291.1;transl_table=11 NC_000913.3 RefSeq gene 803503 805764 . + . ID=gene784;Dbxref=EcoGene:EG13666,GeneID:945380;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;gene_synonym=ECK0760,JW5103;locus_tag=b0771 NC_000913.3 RefSeq CDS 803503 805764 . + 0 ID=cds752;Parent=gene784;Dbxref=ASAP:ABE-0002626,UniProtKB/Swiss-Prot:P75764,Genbank:NP_415292.2,EcoGene:EG13666,GeneID:945380;Name=NP_415292.2;Note=putative enzyme;gbkey=CDS;gene=ybhJ;product=aconitase family protein;protein_id=NP_415292.2;transl_table=11 NC_000913.3 RefSeq repeat_region 805804 805981 . + . ID=id123;Note=REP72 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 805998 807281 . - . ID=gene785;Dbxref=EcoGene:EG12875,GeneID:945381;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;gene_synonym=ECK0761,JW0755;locus_tag=b0772 NC_000913.3 RefSeq CDS 805998 807281 . - 0 ID=cds753;Parent=gene785;Dbxref=ASAP:ABE-0002629,UniProtKB/Swiss-Prot:P46130,Genbank:NP_415293.1,EcoGene:EG12875,GeneID:945381;Name=NP_415293.1;Note=putative pectinesterase;gbkey=CDS;gene=ybhC;product=acyl-CoA thioesterase%2C lipoprotein;protein_id=NP_415293.1;transl_table=11 NC_000913.3 RefSeq gene 807433 807909 . - . ID=gene786;Dbxref=EcoGene:EG11238,GeneID:945383;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;gene_synonym=ECK0762,JW0756;locus_tag=b0773 NC_000913.3 RefSeq CDS 807433 807909 . - 0 ID=cds754;Parent=gene786;Dbxref=ASAP:ABE-0002632,UniProtKB/Swiss-Prot:P12994,Genbank:NP_415294.1,EcoGene:EG11238,GeneID:945383;Name=NP_415294.1;gbkey=CDS;gene=ybhB;product=kinase inhibitor homolog%2C UPF0098 family;protein_id=NP_415294.1;transl_table=11 NC_000913.3 RefSeq gene 807968 809257 . - . ID=gene787;Dbxref=EcoGene:EG10117,GeneID:945376;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;gene_synonym=ECK0763,JW0757;locus_tag=b0774 NC_000913.3 RefSeq CDS 807968 809257 . - 0 ID=cds755;Parent=gene787;Dbxref=ASAP:ABE-0002635,UniProtKB/Swiss-Prot:P12995,Genbank:NP_415295.1,EcoGene:EG10117,GeneID:945376;Name=NP_415295.1;Note=7%2C8-diaminopelargonic acid synthetase;gbkey=CDS;gene=bioA;product=7%2C8-diaminopelargonic acid synthase%2C PLP-dependent;protein_id=NP_415295.1;transl_table=11 NC_000913.3 RefSeq gene 809344 810384 . + . ID=gene788;Dbxref=EcoGene:EG10118,GeneID:945370;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;gene_synonym=ECK0764,JW0758;locus_tag=b0775 NC_000913.3 RefSeq CDS 809344 810384 . + 0 ID=cds756;Parent=gene788;Dbxref=ASAP:ABE-0002644,UniProtKB/Swiss-Prot:P12996,Genbank:NP_415296.1,EcoGene:EG10118,GeneID:945370;Name=NP_415296.1;Note=biotin synthesis%2C sulfur insertion?;gbkey=CDS;gene=bioB;product=biotin synthase;protein_id=NP_415296.1;transl_table=11 NC_000913.3 RefSeq gene 810381 811535 . + . ID=gene789;Dbxref=EcoGene:EG10121,GeneID:945384;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;gene_synonym=ECK0765,JW0759;locus_tag=b0776 NC_000913.3 RefSeq CDS 810381 811535 . + 0 ID=cds757;Parent=gene789;Dbxref=ASAP:ABE-0002646,UniProtKB/Swiss-Prot:P12998,Genbank:NP_415297.1,EcoGene:EG10121,GeneID:945384;Name=NP_415297.1;gbkey=CDS;gene=bioF;product=8-amino-7-oxononanoate synthase;protein_id=NP_415297.1;transl_table=11 NC_000913.3 RefSeq gene 811522 812277 . + . ID=gene790;Dbxref=EcoGene:EG10119,GeneID:945388;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;gene_synonym=ECK0766,JW0760;locus_tag=b0777 NC_000913.3 RefSeq CDS 811522 812277 . + 0 ID=cds758;Parent=gene790;Dbxref=ASAP:ABE-0002648,UniProtKB/Swiss-Prot:P12999,Genbank:NP_415298.1,EcoGene:EG10119,GeneID:945388;Name=NP_415298.1;Note=biotin biosynthesis%3B reaction prior to pimeloyl CoA;gbkey=CDS;gene=bioC;product=malonyl-ACP O-methyltransferase%2C SAM-dependent;protein_id=NP_415298.1;transl_table=11 NC_000913.3 RefSeq gene 812270 812947 . + . ID=gene791;Dbxref=EcoGene:EG10120,GeneID:945387;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;gene_synonym=ECK0767,JW0761;locus_tag=b0778 NC_000913.3 RefSeq CDS 812270 812947 . + 0 ID=cds759;Parent=gene791;Dbxref=ASAP:ABE-0002650,UniProtKB/Swiss-Prot:P13000,Genbank:NP_415299.1,EcoGene:EG10120,GeneID:945387;Name=NP_415299.1;gbkey=CDS;gene=bioD;product=dethiobiotin synthetase;protein_id=NP_415299.1;transl_table=11 NC_000913.3 RefSeq gene 813526 815547 . + . ID=gene792;Dbxref=EcoGene:EG11062,GeneID:945385;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;gene_synonym=dar-1,dar-6,ECK0768,JW0762;locus_tag=b0779 NC_000913.3 RefSeq CDS 813526 815547 . + 0 ID=cds760;Parent=gene792;Dbxref=ASAP:ABE-0002658,UniProtKB/Swiss-Prot:P0A8F8,Genbank:NP_415300.1,EcoGene:EG11062,GeneID:945385;Name=NP_415300.1;Note=DNA repair%3B excision nuclease subunit B;gbkey=CDS;gene=uvrB;product=exision nuclease of nucleotide excision repair%2C DNA damage recognition component;protein_id=NP_415300.1;transl_table=11 NC_000913.3 RefSeq repeat_region 815585 815681 . + . ID=id124;Note=RIP73 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 815739 816647 . - . ID=gene793;Dbxref=EcoGene:EG13667,GeneID:945390;Name=ybhK;gbkey=Gene;gene=ybhK;gene_biotype=protein_coding;gene_synonym=ECK0769,JW0763;locus_tag=b0780 NC_000913.3 RefSeq CDS 815739 816647 . - 0 ID=cds761;Parent=gene793;Dbxref=ASAP:ABE-0002661,UniProtKB/Swiss-Prot:P75767,Genbank:NP_415301.1,EcoGene:EG13667,GeneID:945390;Name=NP_415301.1;Note=putative structural protein;gbkey=CDS;gene=ybhK;product=putative CofD superfamily transferase;protein_id=NP_415301.1;transl_table=11 NC_000913.3 RefSeq gene 817044 818033 . + . ID=gene794;Dbxref=EcoGene:EG11595,GeneID:945392;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;gene_synonym=bisA,chlA,ECK0770,JW0764,narA;locus_tag=b0781 NC_000913.3 RefSeq CDS 817044 818033 . + 0 ID=cds762;Parent=gene794;Dbxref=ASAP:ABE-0002669,UniProtKB/Swiss-Prot:P30745,Genbank:NP_415302.1,EcoGene:EG11595,GeneID:945392;Name=NP_415302.1;Note=molybdopterin biosynthesis%2C protein A;gbkey=CDS;gene=moaA;product=molybdopterin biosynthesis protein A;protein_id=NP_415302.1;transl_table=11 NC_000913.3 RefSeq gene 818055 818567 . + . ID=gene795;Dbxref=EcoGene:EG11596,GeneID:945396;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;gene_synonym=ECK0771,JW0765;locus_tag=b0782 NC_000913.3 RefSeq CDS 818055 818567 . + 0 ID=cds763;Parent=gene795;Dbxref=ASAP:ABE-0002671,UniProtKB/Swiss-Prot:P0AEZ9,Genbank:NP_415303.1,EcoGene:EG11596,GeneID:945396;Name=NP_415303.1;Note=moaB is not required for molybdopterin biosynthesis;gbkey=CDS;gene=moaB;product=inactive molybdopterin adenylyltransferase;protein_id=NP_415303.1;transl_table=11 NC_000913.3 RefSeq gene 818570 819055 . + . ID=gene796;Dbxref=EcoGene:EG11666,GeneID:945397;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;gene_synonym=ECK0772,JW0766;locus_tag=b0783 NC_000913.3 RefSeq CDS 818570 819055 . + 0 ID=cds764;Parent=gene796;Dbxref=ASAP:ABE-0002673,UniProtKB/Swiss-Prot:P0A738,Genbank:NP_415304.1,EcoGene:EG11666,GeneID:945397;Name=NP_415304.1;gbkey=CDS;gene=moaC;product=molybdopterin biosynthesis%2C protein C;protein_id=NP_415304.1;transl_table=11 NC_000913.3 RefSeq gene 819048 819293 . + . ID=gene797;Dbxref=EcoGene:EG11597,GeneID:945398;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;gene_synonym=chlM,ECK0773,JW0767;locus_tag=b0784 NC_000913.3 RefSeq CDS 819048 819293 . + 0 ID=cds765;Parent=gene797;Dbxref=ASAP:ABE-0002675,UniProtKB/Swiss-Prot:P30748,Genbank:NP_415305.1,EcoGene:EG11597,GeneID:945398;Name=NP_415305.1;Note=molybdopterin biosynthesis;gbkey=CDS;gene=moaD;product=molybdopterin synthase%2C small subunit;protein_id=NP_415305.1;transl_table=11 NC_000913.3 RefSeq gene 819295 819747 . + . ID=gene798;Dbxref=EcoGene:EG11598,GeneID:945399;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;gene_synonym=ECK0774,JW0768;locus_tag=b0785 NC_000913.3 RefSeq CDS 819295 819747 . + 0 ID=cds766;Parent=gene798;Dbxref=ASAP:ABE-0002678,UniProtKB/Swiss-Prot:P30749,Genbank:NP_415306.1,EcoGene:EG11598,GeneID:945399;Name=NP_415306.1;Note=molybdopterin converting factor%2C subunit 2;gbkey=CDS;gene=moaE;product=molybdopterin synthase%2C large subunit;protein_id=NP_415306.1;transl_table=11 NC_000913.3 RefSeq repeat_region 819758 819784 . + . ID=id125;Note=REP74 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 819884 820588 . + . ID=gene799;Dbxref=EcoGene:EG13668,GeneID:945401;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;gene_synonym=aceP,ECK0775,JW0769;locus_tag=b0786 NC_000913.3 RefSeq CDS 819884 820588 . + 0 ID=cds767;Parent=gene799;Dbxref=ASAP:ABE-0002685,UniProtKB/Swiss-Prot:P0AAC4,Genbank:NP_415307.1,EcoGene:EG13668,GeneID:945401;Name=NP_415307.1;gbkey=CDS;gene=ybhL;product=putative acetate transporter%3B BAX Inhibitor-1 family inner membrane protein;protein_id=NP_415307.1;transl_table=11 NC_000913.3 RefSeq gene 820793 821506 . + . ID=gene800;Dbxref=EcoGene:EG13669,GeneID:949001;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;gene_synonym=ECK0776,JW0770;locus_tag=b0787 NC_000913.3 RefSeq CDS 820793 821506 . + 0 ID=cds768;Parent=gene800;Dbxref=ASAP:ABE-0002688,UniProtKB/Swiss-Prot:P75769,Genbank:NP_415308.1,EcoGene:EG13669,GeneID:949001;Name=NP_415308.1;gbkey=CDS;gene=ybhM;product=BAX Inhibitor-1 family inner membrane protein;protein_id=NP_415308.1;transl_table=11 NC_000913.3 RefSeq gene 821542 822498 . - . ID=gene801;Dbxref=EcoGene:EG13670,GeneID:945410;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;gene_synonym=ECK0777,JW0771;locus_tag=b0788 NC_000913.3 RefSeq CDS 821542 822498 . - 0 ID=cds769;Parent=gene801;Dbxref=ASAP:ABE-0002690,UniProtKB/Swiss-Prot:P75770,Genbank:NP_415309.1,EcoGene:EG13670,GeneID:945410;Name=NP_415309.1;gbkey=CDS;gene=ybhN;product=UPF0104 family inner membrane protein;protein_id=NP_415309.1;transl_table=11 NC_000913.3 RefSeq gene 822498 823739 . - . ID=gene802;Dbxref=EcoGene:EG13671,GeneID:945409;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;gene_synonym=ECK0778,JW0772,ybhO;locus_tag=b0789 NC_000913.3 RefSeq CDS 822498 823739 . - 0 ID=cds770;Parent=gene802;Dbxref=ASAP:ABE-0002692,UniProtKB/Swiss-Prot:P0AA84,Genbank:NP_415310.1,EcoGene:EG13671,GeneID:945409;Name=NP_415310.1;Note=cardiolipin synthase activity;gbkey=CDS;gene=clsB;product=cardiolipin synthase 2;protein_id=NP_415310.1;transl_table=11 NC_000913.3 RefSeq gene 823736 824497 . - . ID=gene803;Dbxref=EcoGene:EG13672,GeneID:945408;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;gene_synonym=ECK0779,JW0773;locus_tag=b0790 NC_000913.3 RefSeq CDS 823736 824497 . - 0 ID=cds771;Parent=gene803;Dbxref=ASAP:ABE-0002696,UniProtKB/Swiss-Prot:P0AAW1,Genbank:NP_415311.1,EcoGene:EG13672,GeneID:945408;Name=NP_415311.1;gbkey=CDS;gene=ybhP;product=endo/exonuclease/phosphatase family protein;protein_id=NP_415311.1;transl_table=11 NC_000913.3 RefSeq gene 824630 825040 . + . ID=gene804;Dbxref=EcoGene:EG13673,GeneID:945405;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;gene_synonym=ECK0780,JW0774;locus_tag=b0791 NC_000913.3 RefSeq CDS 824630 825040 . + 0 ID=cds772;Parent=gene804;Dbxref=ASAP:ABE-0002699,UniProtKB/Swiss-Prot:P0AAW5,Genbank:NP_415312.1,EcoGene:EG13673,GeneID:945405;Name=NP_415312.1;gbkey=CDS;gene=ybhQ;product=inner membrane protein;protein_id=NP_415312.1;transl_table=11 NC_000913.3 RefSeq gene 825002 826108 . - . ID=gene805;Dbxref=EcoGene:EG13674,GeneID:945403;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;gene_synonym=ECK0781,JW5803;locus_tag=b0792 NC_000913.3 RefSeq CDS 825002 826108 . - 0 ID=cds773;Parent=gene805;Dbxref=ASAP:ABE-0002701,UniProtKB/Swiss-Prot:P0AFP9,Genbank:NP_415313.1,EcoGene:EG13674,GeneID:945403;Name=NP_415313.1;gbkey=CDS;gene=ybhR;product=putative ABC transporter permease;protein_id=NP_415313.1;transl_table=11 NC_000913.3 RefSeq gene 826119 827252 . - . ID=gene806;Dbxref=EcoGene:EG13675,GeneID:945411;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;gene_synonym=ECK0782,JW0777;locus_tag=b0793 NC_000913.3 RefSeq CDS 826119 827252 . - 0 ID=cds774;Parent=gene806;Dbxref=ASAP:ABE-0002703,UniProtKB/Swiss-Prot:P0AFQ2,Genbank:NP_415314.1,EcoGene:EG13675,GeneID:945411;Name=NP_415314.1;gbkey=CDS;gene=ybhS;product=putative ABC transporter permease;protein_id=NP_415314.1;transl_table=11 NC_000913.3 RefSeq gene 827245 828981 . - . ID=gene807;Dbxref=EcoGene:EG13314,GeneID:945413;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;gene_synonym=ECK0783,JW5104;locus_tag=b0794 NC_000913.3 RefSeq CDS 827245 828981 . - 0 ID=cds775;Parent=gene807;Dbxref=ASAP:ABE-0002707,UniProtKB/Swiss-Prot:P0A9U1,Genbank:NP_415315.4,EcoGene:EG13314,GeneID:945413;Name=NP_415315.4;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=ybhF;product=putative ABC transporter ATPase;protein_id=NP_415315.4;transl_table=11 NC_000913.3 RefSeq gene 828974 829972 . - . ID=gene808;Dbxref=EcoGene:EG13315,GeneID:945414;Name=ybhG;gbkey=Gene;gene=ybhG;gene_biotype=protein_coding;gene_synonym=ECK0784,JW0779;locus_tag=b0795 NC_000913.3 RefSeq CDS 828974 829972 . - 0 ID=cds776;Parent=gene808;Dbxref=ASAP:ABE-0002709,UniProtKB/Swiss-Prot:P75777,Genbank:NP_415316.1,EcoGene:EG13315,GeneID:945414;Name=NP_415316.1;Note=putative membrane protein;gbkey=CDS;gene=ybhG;product=putative membrane fusion protein (MFP) component of efflux pump%2C membrane anchor;protein_id=NP_415316.1;transl_table=11 NC_000913.3 RefSeq gene 829972 830643 . - . ID=gene809;Dbxref=EcoGene:EG12406,GeneID:945421;Name=ybiH;gbkey=Gene;gene=ybiH;gene_biotype=protein_coding;gene_synonym=ECK0785,JW0780;locus_tag=b0796 NC_000913.3 RefSeq CDS 829972 830643 . - 0 ID=cds777;Parent=gene809;Dbxref=ASAP:ABE-0002711,UniProtKB/Swiss-Prot:P0ACU0,Genbank:NP_415317.4,EcoGene:EG12406,GeneID:945421;Name=NP_415317.4;Note=putative transcriptional regulator;gbkey=CDS;gene=ybiH;product=DUF1956 domain-containing tetR family putative transcriptional regulator;protein_id=NP_415317.4;transl_table=11 NC_000913.3 RefSeq gene 830872 832236 . + . ID=gene810;Dbxref=EcoGene:EG11235,GeneID:945425;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;gene_synonym=ECK0786,JW0781;locus_tag=b0797 NC_000913.3 RefSeq CDS 830872 832236 . + 0 ID=cds778;Parent=gene810;Dbxref=ASAP:ABE-0002719,UniProtKB/Swiss-Prot:P25888,Genbank:NP_415318.1,EcoGene:EG11235,GeneID:945425;Name=NP_415318.1;Note=putative ATP-dependent RNA helicase;gbkey=CDS;gene=rhlE;product=ATP-dependent RNA helicase;protein_id=NP_415318.1;transl_table=11 NC_000913.3 RefSeq repeat_region 832289 832386 . + . ID=id126;Note=RIP75 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 832468 832950 . - . ID=gene811;Dbxref=EcoGene:EG11579,GeneID:945426;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;gene_synonym=ECK0787,JW0783;locus_tag=b0798 NC_000913.3 RefSeq CDS 832468 832950 . - 0 ID=cds779;Parent=gene811;Dbxref=ASAP:ABE-0002722,UniProtKB/Swiss-Prot:P30176,Genbank:NP_415319.1,EcoGene:EG11579,GeneID:945426;Name=NP_415319.1;gbkey=CDS;gene=ybiA;product=DUF1768 family protein;protein_id=NP_415319.1;transl_table=11 NC_000913.3 RefSeq gene 833070 835220 . + . ID=gene812;Dbxref=EcoGene:EG11357,GeneID:945431;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;gene_synonym=ECK0788,JW0784,rarB;locus_tag=b0799 NC_000913.3 RefSeq CDS 833070 835220 . + 0 ID=cds780;Parent=gene812;Dbxref=ASAP:ABE-0002732,UniProtKB/Swiss-Prot:P27296,Genbank:NP_415320.1,EcoGene:EG11357,GeneID:945431;Name=NP_415320.1;Note=probably ATP-dependent helicase;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase;protein_id=NP_415320.1;transl_table=11 NC_000913.3 RefSeq gene 835248 836210 . + . ID=gene813;Dbxref=EcoGene:EG11580,GeneID:945424;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;gene_synonym=ECK0789,JW0785;locus_tag=b0800 NC_000913.3 RefSeq CDS 835248 836210 . + 0 ID=cds781;Parent=gene813;Dbxref=ASAP:ABE-0002734,UniProtKB/Swiss-Prot:P30177,Genbank:NP_415321.1,EcoGene:EG11580,GeneID:945424;Name=NP_415321.1;Note=putative enzyme;gbkey=CDS;gene=ybiB;product=putative family 3 glycosyltransferase;protein_id=NP_415321.1;transl_table=11 NC_000913.3 RefSeq repeat_region 836222 836245 . + . ID=id127;Note=REP76 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 836351 837436 . + . ID=gene814;Dbxref=EcoGene:EG11581,GeneID:945412;Name=ybiC;gbkey=Gene;gene=ybiC;gene_biotype=protein_coding;gene_synonym=ECK0790,JW0786;locus_tag=b0801 NC_000913.3 RefSeq CDS 836351 837436 . + 0 ID=cds782;Parent=gene814;Dbxref=ASAP:ABE-0002738,UniProtKB/Swiss-Prot:P30178,Genbank:NP_415322.1,EcoGene:EG11581,GeneID:945412;Name=NP_415322.1;Note=putative dehydrogenase;gbkey=CDS;gene=ybiC;product=putative dehydrogenase;protein_id=NP_415322.1;transl_table=11 NC_000913.3 RefSeq repeat_region 837539 837661 . + . ID=id128;Note=REP77 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 837665 837925 . - . ID=gene815;Dbxref=EcoGene:EG12422,GeneID:945433;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;gene_synonym=ECK0791,JW0787;locus_tag=b0802 NC_000913.3 RefSeq CDS 837665 837925 . - 0 ID=cds783;Parent=gene815;Dbxref=ASAP:ABE-0002741,UniProtKB/Swiss-Prot:P0AAX3,Genbank:NP_415323.1,EcoGene:EG12422,GeneID:945433;Name=NP_415323.1;gbkey=CDS;gene=ybiJ;product=DUF1471 family putative periplasmic protein;protein_id=NP_415323.1;transl_table=11 NC_000913.3 RefSeq gene 838190 838456 . - . ID=gene816;Dbxref=EcoGene:EG12421,GeneID:945434;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;gene_synonym=ECK0792,JW0788;locus_tag=b0803 NC_000913.3 RefSeq CDS 838190 838456 . - 0 ID=cds784;Parent=gene816;Dbxref=ASAP:ABE-0002744,UniProtKB/Swiss-Prot:P41039,Genbank:NP_415324.1,EcoGene:EG12421,GeneID:945434;Name=NP_415324.1;gbkey=CDS;gene=ybiI;product=DksA-type zinc finger protein;protein_id=NP_415324.1;transl_table=11 NC_000913.3 RefSeq gene 838530 839207 . - . ID=gene817;Dbxref=EcoGene:EG13316,GeneID:947502;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;gene_synonym=ECK0793,JW5105;locus_tag=b0804 NC_000913.3 RefSeq CDS 838530 839207 . - 0 ID=cds785;Parent=gene817;Dbxref=ASAP:ABE-0002746,UniProtKB/Swiss-Prot:P75779,Genbank:NP_415325.4,EcoGene:EG13316,GeneID:947502;Name=NP_415325.4;Note=putative enzyme;gbkey=CDS;gene=ybiX;product=Fe(II)-dependent oxygenase superfamily protein;protein_id=NP_415325.4;transl_table=11 NC_000913.3 RefSeq gene 839249 841531 . - . ID=gene818;Dbxref=EcoGene:EG13317,GeneID:946246;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;gene_synonym=ECK0794,JW0790,ybiL;locus_tag=b0805 NC_000913.3 RefSeq CDS 839249 841531 . - 0 ID=cds786;Parent=gene818;Dbxref=ASAP:ABE-0002749,UniProtKB/Swiss-Prot:P75780,Genbank:NP_415326.1,EcoGene:EG13317,GeneID:946246;Name=NP_415326.1;Note=ferric iron outer membrane transporter%2C TonB-dependent%3B siderophore receptor for ferri-dihydroxybenzoylserine%2C ferri-dihydroxybenzoate and other catecholate siderophores%3B surface receptor for colicins G%2C H%2C and E492;gbkey=CDS;gene=fiu;product=catecholate siderophore receptor;protein_id=NP_415326.1;transl_table=11 NC_000913.3 RefSeq gene 841796 842056 . - . ID=gene819;Dbxref=EcoGene:EG13318,GeneID:947523;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;gene_synonym=ECK0795,JW5106,ybiM;locus_tag=b0806 NC_000913.3 RefSeq CDS 841796 842056 . - 0 ID=cds787;Parent=gene819;Dbxref=ASAP:ABE-0002753,UniProtKB/Swiss-Prot:P0AAX6,Genbank:NP_415327.2,EcoGene:EG13318,GeneID:947523;Name=NP_415327.2;gbkey=CDS;gene=mcbA;product=colanic acid mucoidy stimulation protein;protein_id=NP_415327.2;transl_table=11 NC_000913.3 RefSeq gene 842332 843258 . + . ID=gene820;Dbxref=EcoGene:EG13319,GeneID:944938;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;gene_synonym=ECK0796,JW5107,ybiN;locus_tag=b0807 NC_000913.3 RefSeq CDS 842332 843258 . + 0 ID=cds788;Parent=gene820;Dbxref=ASAP:ABE-0002757,UniProtKB/Swiss-Prot:P75782,Genbank:NP_415328.4,EcoGene:EG13319,GeneID:944938;Name=NP_415328.4;gbkey=CDS;gene=rlmF;product=23S rRNA m(6)A1618 methyltransferase%2C SAM-dependent;protein_id=NP_415328.4;transl_table=11 NC_000913.3 RefSeq gene 843255 845480 . - . ID=gene821;Dbxref=EcoGene:EG13320,GeneID:945935;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;gene_synonym=ECK0797,JW5108;locus_tag=b0808 NC_000913.3 RefSeq CDS 843255 845480 . - 0 ID=cds789;Parent=gene821;Dbxref=ASAP:ABE-0002760,UniProtKB/Swiss-Prot:P75783,Genbank:NP_415329.4,EcoGene:EG13320,GeneID:945935;Name=NP_415329.4;Note=putative transport protein;gbkey=CDS;gene=ybiO;product=mechanosensitive channel protein%2C intermediate conductance;protein_id=NP_415329.4;transl_table=11 NC_000913.3 RefSeq repeat_region 845631 845729 . + . ID=id129;Note=RIP78 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 845741 846463 . - . ID=gene822;Dbxref=EcoGene:EG10389,GeneID:945435;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;gene_synonym=ECK0798,JW0794;locus_tag=b0809 NC_000913.3 RefSeq CDS 845741 846463 . - 0 ID=cds790;Parent=gene822;Dbxref=ASAP:ABE-0002764,UniProtKB/Swiss-Prot:P10346,Genbank:NP_415330.1,EcoGene:EG10389,GeneID:945435;Name=NP_415330.1;Note=ATP-binding component of glutamine high-affinity transport system;gbkey=CDS;gene=glnQ;product=glutamine transporter subunit;protein_id=NP_415330.1;transl_table=11 NC_000913.3 RefSeq gene 846460 847119 . - . ID=gene823;Dbxref=EcoGene:EG10388,GeneID:945621;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;gene_synonym=ECK0799,JW0795;locus_tag=b0810 NC_000913.3 RefSeq CDS 846460 847119 . - 0 ID=cds791;Parent=gene823;Dbxref=ASAP:ABE-0002766,UniProtKB/Swiss-Prot:P0AEQ6,Genbank:NP_415331.1,EcoGene:EG10388,GeneID:945621;Name=NP_415331.1;Note=glutamine high-affinity transport system%3B membrane component;gbkey=CDS;gene=glnP;product=glutamine transporter subunit;protein_id=NP_415331.1;transl_table=11 NC_000913.3 RefSeq gene 847258 848004 . - . ID=gene824;Dbxref=EcoGene:EG10386,GeneID:944872;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;gene_synonym=ECK0800,JW0796;locus_tag=b0811 NC_000913.3 RefSeq CDS 847258 848004 . - 0 ID=cds792;Parent=gene824;Dbxref=ASAP:ABE-0002771,UniProtKB/Swiss-Prot:P0AEQ3,Genbank:NP_415332.1,EcoGene:EG10386,GeneID:944872;Name=NP_415332.1;Note=periplasmic glutamine-binding protein%3B permease;gbkey=CDS;gene=glnH;product=glutamine transporter subunit;protein_id=NP_415332.1;transl_table=11 NC_000913.3 RefSeq gene 848408 848911 . - . ID=gene825;Dbxref=EcoGene:EG11415,GeneID:945101;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=ECK0801,JW0797,pexB,vtm;locus_tag=b0812 NC_000913.3 RefSeq CDS 848408 848911 . - 0 ID=cds793;Parent=gene825;Dbxref=ASAP:ABE-0002776,UniProtKB/Swiss-Prot:P0ABT2,Genbank:NP_415333.1,EcoGene:EG11415,GeneID:945101;Name=NP_415333.1;Note=global regulator%2C starvation conditions;gbkey=CDS;gene=dps;product=Fe-binding and storage protein%3B stress-inducible DNA-binding protein;protein_id=NP_415333.1;transl_table=11 NC_000913.3 RefSeq gene 849210 850097 . - . ID=gene826;Dbxref=EcoGene:EG12134,GeneID:947045;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;gene_synonym=ECK0802,JW0798,ybiF;locus_tag=b0813 NC_000913.3 RefSeq CDS 849210 850097 . - 0 ID=cds794;Parent=gene826;Dbxref=ASAP:ABE-0002779,UniProtKB/Swiss-Prot:P0AA67,Genbank:NP_415334.1,EcoGene:EG12134,GeneID:947045;Name=NP_415334.1;Note=putative transmembrane subunit;gbkey=CDS;gene=rhtA;product=threonine and homoserine efflux system;protein_id=NP_415334.1;transl_table=11 NC_000913.3 RefSeq gene 850450 850965 . + . ID=gene827;Dbxref=EcoGene:EG12135,GeneID:944967;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;gene_synonym=ECK0803,JW0799,ybiG;locus_tag=b0814 NC_000913.3 RefSeq CDS 850450 850965 . + 0 ID=cds795;Parent=gene827;Dbxref=ASAP:ABE-0002784,UniProtKB/Swiss-Prot:P0A917,Genbank:NP_415335.1,EcoGene:EG12135,GeneID:944967;Name=NP_415335.1;Note=outer membrane protein X;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=NP_415335.1;transl_table=11 NC_000913.3 RefSeq gene 851014 852597 . - . ID=gene828;Dbxref=EcoGene:EG13321,GeneID:945360;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;gene_synonym=ECK0804,JW0800,ybiP;locus_tag=b0815 NC_000913.3 RefSeq CDS 851014 852597 . - 0 ID=cds796;Parent=gene828;Dbxref=ASAP:ABE-0002786,UniProtKB/Swiss-Prot:P75785,Genbank:NP_415336.1,EcoGene:EG13321,GeneID:945360;Name=NP_415336.1;Note=putative enzyme;gbkey=CDS;gene=opgE;product=OPG biosynthetic transmembrane phosphoethanolamine transferase;protein_id=NP_415336.1;transl_table=11 NC_000913.3 RefSeq gene 852869 852997 . - . ID=gene829;Dbxref=EcoGene:EG14500,GeneID:14678509;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;gene_synonym=ECK4517,rybA;locus_tag=b4705 NC_000913.3 RefSeq CDS 852869 852997 . - 0 ID=cds797;Parent=gene829;Dbxref=UniProtKB/Swiss-Prot:P0DKB3,Genbank:YP_009029995.1,EcoGene:EG14500,GeneID:14678509;Name=YP_009029995.1;gbkey=CDS;gene=mntS;product=Mn(2)-response protein%2C MntR-repressed;protein_id=YP_009029995.1;transl_table=11 NC_000913.3 RefSeq gene 853183 853650 . + . ID=gene830;Dbxref=EcoGene:EG13322,GeneID:945437;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;gene_synonym=ECK0807,JW0801,ybiQ;locus_tag=b0817 NC_000913.3 RefSeq CDS 853183 853650 . + 0 ID=cds798;Parent=gene830;Dbxref=ASAP:ABE-0002793,UniProtKB/Swiss-Prot:P0A9F1,Genbank:NP_415338.1,EcoGene:EG13322,GeneID:945437;Name=NP_415338.1;gbkey=CDS;gene=mntR;product=Mn(2+)-responsive manganese regulon transcriptional regulator;protein_id=NP_415338.1;transl_table=11 NC_000913.3 RefSeq gene 853647 854765 . + . ID=gene831;Dbxref=EcoGene:EG13323,GeneID:945438;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;gene_synonym=ECK0808,JW0802;locus_tag=b0818 NC_000913.3 RefSeq CDS 853647 854765 . + 0 ID=cds799;Parent=gene831;Dbxref=ASAP:ABE-0002795,UniProtKB/Swiss-Prot:P75788,Genbank:NP_415339.1,EcoGene:EG13323,GeneID:945438;Name=NP_415339.1;gbkey=CDS;gene=ybiR;product=putative transporter;protein_id=NP_415339.1;transl_table=11 NC_000913.3 RefSeq gene 854824 855744 . - . ID=gene832;Dbxref=EcoGene:EG13324,GeneID:945441;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;gene_synonym=ECK0809,JW0803,ybiS;locus_tag=b0819 NC_000913.3 RefSeq CDS 854824 855744 . - 0 ID=cds800;Parent=gene832;Dbxref=ASAP:ABE-0002797,UniProtKB/Swiss-Prot:P0AAX8,Genbank:NP_415340.1,EcoGene:EG13324,GeneID:945441;Name=NP_415340.1;gbkey=CDS;gene=ldtB;product=L%2CD-transpeptidase linking Lpp to murein;protein_id=NP_415340.1;transl_table=11 NC_000913.3 RefSeq gene 855963 857555 . + . ID=gene833;Dbxref=EcoGene:EG13325,GeneID:945440;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;gene_synonym=ECK0810,JW0804;locus_tag=b0820 NC_000913.3 RefSeq CDS 855963 857555 . + 0 ID=cds801;Parent=gene833;Dbxref=ASAP:ABE-0002801,UniProtKB/Swiss-Prot:P0A9U3,Genbank:NP_415341.1,EcoGene:EG13325,GeneID:945440;Name=NP_415341.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=ybiT;product=ABC-F family putative regulatory ATPase;protein_id=NP_415341.1;transl_table=11 NC_000913.3 RefSeq repeat_region 857616 857713 . + . ID=id130;Note=RIP79 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 857796 859061 . - . ID=gene834;Dbxref=EcoGene:EG13326,GeneID:945439;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;gene_synonym=ECK0811,JW0805;locus_tag=b0821 NC_000913.3 RefSeq CDS 857796 859061 . - 0 ID=cds802;Parent=gene834;Dbxref=ASAP:ABE-0002804,UniProtKB/Swiss-Prot:P75791,Genbank:NP_415342.1,EcoGene:EG13326,GeneID:945439;Name=NP_415342.1;gbkey=CDS;gene=ybiU;product=DUF1479 family protein;protein_id=NP_415342.1;transl_table=11 NC_000913.3 RefSeq gene 859213 860028 . - . ID=gene835;Dbxref=EcoGene:EG13327,GeneID:945432;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;gene_synonym=ECK0812,JW0806,supH;locus_tag=b0822 NC_000913.3 RefSeq CDS 859213 860028 . - 0 ID=cds803;Parent=gene835;Dbxref=ASAP:ABE-0002807,UniProtKB/Swiss-Prot:P75792,Genbank:NP_415343.1,EcoGene:EG13327,GeneID:945432;Name=NP_415343.1;gbkey=CDS;gene=ybiV;product=sugar phosphatase%3B fructose-1-P/ribose-5-P/glucose-6-P phosphatase;protein_id=NP_415343.1;transl_table=11 NC_000913.3 RefSeq gene 860174 862606 . - . ID=gene836;Dbxref=EcoGene:EG13328,GeneID:945444;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;gene_synonym=ECK0813,JW0807,pflF;locus_tag=b0823 NC_000913.3 RefSeq CDS 860174 862606 . - 0 ID=cds804;Parent=gene836;Dbxref=ASAP:ABE-0002810,UniProtKB/Swiss-Prot:P75793,Genbank:NP_415344.1,EcoGene:EG13328,GeneID:945444;Name=NP_415344.1;gbkey=CDS;gene=ybiW;product=putative pyruvate formate lyase;protein_id=NP_415344.1;transl_table=11 NC_000913.3 RefSeq gene 862612 863511 . - . ID=gene837;Dbxref=EcoGene:EG13470,GeneID:945445;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;gene_synonym=ECK0814,JW0808,pflE;locus_tag=b0824 NC_000913.3 RefSeq CDS 862612 863511 . - 0 ID=cds805;Parent=gene837;Dbxref=ASAP:ABE-0002812,UniProtKB/Swiss-Prot:P75794,Genbank:NP_415345.2,EcoGene:EG13470,GeneID:945445;Name=NP_415345.2;gbkey=CDS;gene=ybiY;product=putative pyruvate formate lyase activating enzyme;protein_id=NP_415345.2;transl_table=11 NC_000913.3 RefSeq gene 863642 864304 . + . ID=gene838;Dbxref=EcoGene:EG13471,GeneID:945449;Name=fsaA;gbkey=Gene;gene=fsaA;gene_biotype=protein_coding;gene_synonym=ECK0815,JW5109,mipB,ybiZ;locus_tag=b0825 NC_000913.3 RefSeq CDS 863642 864304 . + 0 ID=cds806;Parent=gene838;Dbxref=ASAP:ABE-0002818,UniProtKB/Swiss-Prot:P78055,Genbank:NP_415346.4,EcoGene:EG13471,GeneID:945449;Name=NP_415346.4;Note=fructose-6-phosphate aldolase;gbkey=CDS;gene=fsaA;product=fructose-6-phosphate aldolase 1;protein_id=NP_415346.4;transl_table=11 NC_000913.3 RefSeq repeat_region 864333 864370 . + . ID=id131;Note=REP80 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 864380 865129 . - . ID=gene839;Dbxref=EcoGene:EG10154,GeneID:945452;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;gene_synonym=chlN,ECK0816,JW0810;locus_tag=b0826 NC_000913.3 RefSeq CDS 864380 865129 . - 0 ID=cds807;Parent=gene839;Dbxref=ASAP:ABE-0002820,UniProtKB/Swiss-Prot:P12282,Genbank:NP_415347.1,EcoGene:EG10154,GeneID:945452;Name=NP_415347.1;Note=molybdopterin biosynthesis;gbkey=CDS;gene=moeB;product=molybdopterin synthase sulfurylase;protein_id=NP_415347.1;transl_table=11 NC_000913.3 RefSeq gene 865129 866364 . - . ID=gene840;Dbxref=EcoGene:EG10153,GeneID:945454;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;gene_synonym=bisB,chlE,ECK0817,JW0811,narE;locus_tag=b0827 NC_000913.3 RefSeq CDS 865129 866364 . - 0 ID=cds808;Parent=gene840;Dbxref=ASAP:ABE-0002823,UniProtKB/Swiss-Prot:P12281,Genbank:NP_415348.1,EcoGene:EG10153,GeneID:945454;Name=NP_415348.1;Note=molybdopterin biosynthesis;gbkey=CDS;gene=moeA;product=molybdopterin molybdenumtransferase%3B molybdopterin biosynthesis protein;protein_id=NP_415348.1;transl_table=11 NC_000913.3 RefSeq gene 866568 867533 . + . ID=gene841;Dbxref=EcoGene:EG12407,GeneID:945456;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;gene_synonym=ECK0818,JW0812,spt,ybiK;locus_tag=b0828 NC_000913.3 RefSeq CDS 866568 867533 . + 0 ID=cds809;Parent=gene841;Dbxref=ASAP:ABE-0002828,UniProtKB/Swiss-Prot:P37595,Genbank:NP_415349.1,EcoGene:EG12407,GeneID:945456;Name=NP_415349.1;Note=putative asparaginase;gbkey=CDS;gene=iaaA;product=Isoaspartyl peptidase;protein_id=NP_415349.1;transl_table=11 NC_000913.3 RefSeq gene 867520 869391 . + . ID=gene842;Dbxref=EcoGene:EG13472,GeneID:945457;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;gene_synonym=ECK0819,JW5897,yliA;locus_tag=b0829 NC_000913.3 RefSeq CDS 867520 869391 . + 0 ID=cds810;Parent=gene842;Dbxref=ASAP:ABE-0002830,UniProtKB/Swiss-Prot:P75796,Genbank:NP_415350.2,EcoGene:EG13472,GeneID:945457;Name=NP_415350.2;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=gsiA;product=glutathione ABC transporter ATPase;protein_id=NP_415350.2;transl_table=11 NC_000913.3 RefSeq gene 869411 870949 . + . ID=gene843;Dbxref=EcoGene:EG13473,GeneID:945459;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;gene_synonym=ECK0820,JW5111,yliB;locus_tag=b0830 NC_000913.3 RefSeq CDS 869411 870949 . + 0 ID=cds811;Parent=gene843;Dbxref=ASAP:ABE-0002832,UniProtKB/Swiss-Prot:P75797,Genbank:NP_415351.1,EcoGene:EG13473,GeneID:945459;Name=NP_415351.1;Note=putative transport protein;gbkey=CDS;gene=gsiB;product=glutathione ABC transporter periplasmic binding protein;protein_id=NP_415351.1;transl_table=11 NC_000913.3 RefSeq gene 870967 871887 . + . ID=gene844;Dbxref=EcoGene:EG13474,GeneID:945460;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;gene_synonym=ECK0821,JW0815,yliC;locus_tag=b0831 NC_000913.3 RefSeq CDS 870967 871887 . + 0 ID=cds812;Parent=gene844;Dbxref=ASAP:ABE-0002834,UniProtKB/Swiss-Prot:P75798,Genbank:NP_415352.1,EcoGene:EG13474,GeneID:945460;Name=NP_415352.1;Note=putative transport system permease protein;gbkey=CDS;gene=gsiC;product=glutathione ABC transporter permease;protein_id=NP_415352.1;transl_table=11 NC_000913.3 RefSeq gene 871890 872801 . + . ID=gene845;Dbxref=EcoGene:EG13475,GeneID:945461;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;gene_synonym=ECK0822,JW0816,yliD;locus_tag=b0832 NC_000913.3 RefSeq CDS 871890 872801 . + 0 ID=cds813;Parent=gene845;Dbxref=ASAP:ABE-0002836,UniProtKB/Swiss-Prot:P75799,Genbank:NP_415353.1,EcoGene:EG13475,GeneID:945461;Name=NP_415353.1;Note=putative transport system permease protein;gbkey=CDS;gene=gsiD;product=glutathione ABC transporter permease;protein_id=NP_415353.1;transl_table=11 NC_000913.3 RefSeq gene 872979 875327 . + . ID=gene846;Dbxref=EcoGene:EG13476,GeneID:945462;Name=yliE;gbkey=Gene;gene=yliE;gene_biotype=protein_coding;gene_synonym=ECK0823,JW0817;locus_tag=b0833 NC_000913.3 RefSeq CDS 872979 875327 . + 0 ID=cds814;Parent=gene846;Dbxref=ASAP:ABE-0002839,UniProtKB/Swiss-Prot:P75800,Genbank:NP_415354.1,EcoGene:EG13476,GeneID:945462;Name=NP_415354.1;gbkey=CDS;gene=yliE;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=NP_415354.1;transl_table=11 NC_000913.3 RefSeq gene 875335 876663 . + . ID=gene847;Dbxref=EcoGene:EG13477,GeneID:945463;Name=yliF;gbkey=Gene;gene=yliF;gene_biotype=protein_coding;gene_synonym=ECK0824,JW0818;locus_tag=b0834 NC_000913.3 RefSeq CDS 875335 876663 . + 0 ID=cds815;Parent=gene847;Dbxref=ASAP:ABE-0002841,UniProtKB/Swiss-Prot:P75801,Genbank:NP_415355.1,EcoGene:EG13477,GeneID:945463;Name=NP_415355.1;gbkey=CDS;gene=yliF;product=putative membrane-anchored diguanylate cyclase;protein_id=NP_415355.1;transl_table=11 NC_000913.3 RefSeq gene 876710 878035 . - . ID=gene848;Dbxref=EcoGene:EG13478,GeneID:945465;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;gene_synonym=ECK0825,JW0819,yliG;locus_tag=b0835 NC_000913.3 RefSeq CDS 876710 878035 . - 0 ID=cds816;Parent=gene848;Dbxref=ASAP:ABE-0002843,UniProtKB/Swiss-Prot:P0AEI4,Genbank:NP_415356.1,EcoGene:EG13478,GeneID:945465;Name=NP_415356.1;gbkey=CDS;gene=rimO;product=ribosomal protein S12 methylthiotransferase;protein_id=NP_415356.1;transl_table=11 NC_000913.3 RefSeq gene 878248 878631 . + . ID=gene849;Dbxref=EcoGene:EG13479,GeneID:945466;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;gene_synonym=ECK0826,JW0820,yliH;locus_tag=b0836 NC_000913.3 RefSeq CDS 878248 878631 . + 0 ID=cds817;Parent=gene849;Dbxref=ASAP:ABE-0002849,UniProtKB/Swiss-Prot:P0AAY1,Genbank:NP_415357.1,EcoGene:EG13479,GeneID:945466;Name=NP_415357.1;Note=putative receptor;gbkey=CDS;gene=bssR;product=repressor of biofilm formation by indole transport regulation;protein_id=NP_415357.1;transl_table=11 NC_000913.3 RefSeq gene 878742 879857 . + . ID=gene850;Dbxref=EcoGene:EG13480,GeneID:945467;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;gene_synonym=ECK0827,JW0821;locus_tag=b0837 NC_000913.3 RefSeq CDS 878742 879857 . + 0 ID=cds818;Parent=gene850;Dbxref=ASAP:ABE-0002852,UniProtKB/Swiss-Prot:P75804,Genbank:NP_415358.1,EcoGene:EG13480,GeneID:945467;Name=NP_415358.1;Note=putative dehydrogenase;gbkey=CDS;gene=yliI;product=soluble aldose sugar dehydrogenase;protein_id=NP_415358.1;transl_table=11 NC_000913.3 RefSeq gene 879854 880480 . - . ID=gene851;Dbxref=EcoGene:EG13481,GeneID:945469;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;gene_synonym=ECK0828,JW0822,yliJ;locus_tag=b0838 NC_000913.3 RefSeq CDS 879854 880480 . - 0 ID=cds819;Parent=gene851;Dbxref=ASAP:ABE-0002855,UniProtKB/Swiss-Prot:P0ACA7,Genbank:NP_415359.4,EcoGene:EG13481,GeneID:945469;Name=NP_415359.4;Note=putative transferase;gbkey=CDS;gene=gstB;product=glutathione S-transferase;protein_id=NP_415359.4;transl_table=11 NC_000913.3 RefSeq gene 880727 881929 . + . ID=gene852;Dbxref=EcoGene:EG10203,GeneID:945455;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;gene_synonym=ECK0829,JW0823;locus_tag=b0839 NC_000913.3 RefSeq CDS 880727 881929 . + 0 ID=cds820;Parent=gene852;Dbxref=ASAP:ABE-0002860,UniProtKB/Swiss-Prot:P08506,Genbank:NP_415360.1,EcoGene:EG10203,GeneID:945455;Name=NP_415360.1;Note=D-alanyl-D-alanine carboxypeptidase%3B penicillin-binding protein 6;gbkey=CDS;gene=dacC;product=D-alanyl-D-alanine carboxypeptidase%3B penicillin-binding protein 6a;protein_id=NP_415360.1;transl_table=11 NC_000913.3 RefSeq repeat_region 881940 881966 . + . ID=id132;Note=REP81 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 881976 882734 . - . ID=gene853;Dbxref=EcoGene:EG10223,GeneID:945453;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;gene_synonym=ECK0830,JW0824,nucR;locus_tag=b0840 NC_000913.3 RefSeq CDS 881976 882734 . - 0 ID=cds821;Parent=gene853;Dbxref=ASAP:ABE-0002862,UniProtKB/Swiss-Prot:P0ACK5,Genbank:NP_415361.1,EcoGene:EG10223,GeneID:945453;Name=NP_415361.1;Note=transcriptional repressor for deo operon%2C tsx%2C nupG;gbkey=CDS;gene=deoR;product=deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor%3B repressor of nupG and tsx;protein_id=NP_415361.1;transl_table=11 NC_000913.3 RefSeq gene 882792 883388 . - . ID=gene854;Dbxref=EcoGene:EG13676,GeneID:945450;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;gene_synonym=bcrC,ECK0831,JW5112;locus_tag=b0841 NC_000913.3 RefSeq CDS 882792 883388 . - 0 ID=cds822;Parent=gene854;Dbxref=ASAP:ABE-0002865,UniProtKB/Swiss-Prot:P75806,Genbank:NP_415362.1,EcoGene:EG13676,GeneID:945450;Name=NP_415362.1;gbkey=CDS;gene=ybjG;product=undecaprenyl pyrophosphate phosphatase;protein_id=NP_415362.1;transl_table=11 NC_000913.3 RefSeq gene 883673 884905 . + . ID=gene855;Dbxref=EcoGene:EG13696,GeneID:945448;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;gene_synonym=cmlA,cmr,ECK0832,JW0826;locus_tag=b0842 NC_000913.3 RefSeq CDS 883673 884905 . + 0 ID=cds823;Parent=gene855;Dbxref=ASAP:ABE-0002871,UniProtKB/Swiss-Prot:P0AEY8,Genbank:NP_415363.1,EcoGene:EG13696,GeneID:945448;Name=NP_415363.1;Note=proton motive force efflux pump;gbkey=CDS;gene=mdfA;product=multidrug efflux system protein;protein_id=NP_415363.1;transl_table=11 NC_000913.3 RefSeq gene 884946 885230 . - . ID=gene856;Dbxref=EcoGene:EG13677,GeneID:945447;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;gene_synonym=ECK0833,JW0827;locus_tag=b0843 NC_000913.3 RefSeq CDS 884946 885230 . - 0 ID=cds824;Parent=gene856;Dbxref=ASAP:ABE-0002873,UniProtKB/Swiss-Prot:P0AAY4,Genbank:NP_415364.1,EcoGene:EG13677,GeneID:945447;Name=NP_415364.1;gbkey=CDS;gene=ybjH;product=uncharacterized protein;protein_id=NP_415364.1;transl_table=11 NC_000913.3 RefSeq gene 885316 886131 . - . ID=gene857;Dbxref=EcoGene:EG13678,GeneID:945470;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;gene_synonym=ECK0834,JW5113;locus_tag=b0844 NC_000913.3 RefSeq CDS 885316 886131 . - 0 ID=cds825;Parent=gene857;Dbxref=ASAP:ABE-0002877,UniProtKB/Swiss-Prot:P75809,Genbank:NP_415365.4,EcoGene:EG13678,GeneID:945470;Name=NP_415365.4;gbkey=CDS;gene=ybjI;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase%3B pyrimidine phosphatase%3B riboflavin synthesis;protein_id=NP_415365.4;transl_table=11 NC_000913.3 RefSeq gene 886131 887339 . - . ID=gene858;Dbxref=EcoGene:EG13679,GeneID:945471;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;gene_synonym=ECK0835,JW0829;locus_tag=b0845 NC_000913.3 RefSeq CDS 886131 887339 . - 0 ID=cds826;Parent=gene858;Dbxref=ASAP:ABE-0002880,UniProtKB/Swiss-Prot:P75810,Genbank:NP_415366.1,EcoGene:EG13679,GeneID:945471;Name=NP_415366.1;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=ybjJ;product=putative drug efflux MFS transporter%2C inner membrane protein;protein_id=NP_415366.1;transl_table=11 NC_000913.3 RefSeq gene 887423 887959 . + . ID=gene859;Dbxref=EcoGene:EG13680,GeneID:945473;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;gene_synonym=ECK0836,JW5114,rcdR,ybjK;locus_tag=b0846 NC_000913.3 RefSeq CDS 887423 887959 . + 0 ID=cds827;Parent=gene859;Dbxref=ASAP:ABE-0002885,UniProtKB/Swiss-Prot:P75811,Genbank:NP_415367.1,EcoGene:EG13680,GeneID:945473;Name=NP_415367.1;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=rcdA;product=transcriptional regulator of csgD and ybiJI%3B autoregulator;protein_id=NP_415367.1;transl_table=11 NC_000913.3 RefSeq gene 887976 888054 . - . ID=gene860;Dbxref=EcoGene:EG31137,GeneID:2847774;Name=rybB;gbkey=Gene;gene=rybB;gene_biotype=antisense_RNA;gene_synonym=ECK0837,JWR0227,p25;locus_tag=b4417 NC_000913.3 RefSeq ncRNA 887976 888054 . - . ID=rna32;Parent=gene860;Dbxref=ASAP:ABE-0047241,EcoGene:EG31137,GeneID:2847774;Note=identified in a large scale screen;gbkey=ncRNA;gene=rybB;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompC and ompW mRNA instability%2C Hfq-dependent NC_000913.3 RefSeq exon 887976 888054 . - . ID=id133;Parent=rna32;Dbxref=ASAP:ABE-0047241,EcoGene:EG31137,GeneID:2847774;Note=identified in a large scale screen;gbkey=ncRNA;gene=rybB;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompC and ompW mRNA instability%2C Hfq-dependent NC_000913.3 RefSeq gene 888134 889819 . - . ID=gene861;Dbxref=EcoGene:EG13681,GeneID:945474;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;gene_synonym=ECK0838,JW0831;locus_tag=b0847 NC_000913.3 RefSeq CDS 888134 889819 . - 0 ID=cds828;Parent=gene861;Dbxref=ASAP:ABE-0002887,UniProtKB/Swiss-Prot:P60869,Genbank:NP_415368.1,EcoGene:EG13681,GeneID:945474;Name=NP_415368.1;Note=putative transport protein;gbkey=CDS;gene=ybjL;product=putative transporter;protein_id=NP_415368.1;transl_table=11 NC_000913.3 RefSeq gene 890089 890466 . + . ID=gene862;Dbxref=EcoGene:EG13682,GeneID:945477;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;gene_synonym=ECK0839,JW0832;locus_tag=b0848 NC_000913.3 RefSeq CDS 890089 890466 . + 0 ID=cds829;Parent=gene862;Dbxref=ASAP:ABE-0002891,UniProtKB/Swiss-Prot:P64439,Genbank:NP_415369.1,EcoGene:EG13682,GeneID:945477;Name=NP_415369.1;gbkey=CDS;gene=ybjM;product=inner membrane protein;protein_id=NP_415369.1;transl_table=11 NC_000913.3 RefSeq gene 890496 890753 . - . ID=gene863;Dbxref=EcoGene:EG10417,GeneID:945479;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;gene_synonym=ECK0840,grx,JW0833;locus_tag=b0849 NC_000913.3 RefSeq CDS 890496 890753 . - 0 ID=cds830;Parent=gene863;Dbxref=ASAP:ABE-0002893,UniProtKB/Swiss-Prot:P68688,Genbank:NP_415370.1,EcoGene:EG10417,GeneID:945479;Name=NP_415370.1;Note=glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase;gbkey=CDS;gene=grxA;product=glutaredoxin 1%2C redox coenzyme for ribonucleotide reductase (RNR1a);protein_id=NP_415370.1;transl_table=11 NC_000913.3 RefSeq gene 890913 891200 . + . ID=gene864;Dbxref=EcoGene:EG12842,GeneID:945481;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;gene_synonym=ECK0841,JW0834;locus_tag=b0850 NC_000913.3 RefSeq CDS 890913 891200 . + 0 ID=cds831;Parent=gene864;Dbxref=ASAP:ABE-0002898,UniProtKB/Swiss-Prot:P46119,Genbank:NP_415371.1,EcoGene:EG12842,GeneID:945481;Name=NP_415371.1;gbkey=CDS;gene=ybjC;product=DUF1418 family protein;protein_id=NP_415371.1;transl_table=11 NC_000913.3 RefSeq gene 891184 891906 . + . ID=gene865;Dbxref=EcoGene:EG11261,GeneID:945483;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;gene_synonym=ECK0842,JW0835,mda18,mdaA,snrA,ybjB;locus_tag=b0851 NC_000913.3 RefSeq CDS 891184 891906 . + 0 ID=cds832;Parent=gene865;Dbxref=ASAP:ABE-0002900,UniProtKB/Swiss-Prot:P17117,Genbank:NP_415372.1,EcoGene:EG11261,GeneID:945483;Name=NP_415372.1;gbkey=CDS;gene=nfsA;product=nitroreductase A%2C NADPH-dependent%2C FMN-dependent;protein_id=NP_415372.1;transl_table=11 NC_000913.3 RefSeq gene 891967 892869 . + . ID=gene866;Dbxref=EcoGene:EG10852,GeneID:945484;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;gene_synonym=ECK0843,JW0836,nek;locus_tag=b0852 NC_000913.3 RefSeq CDS 891967 892869 . + 0 ID=cds833;Parent=gene866;Dbxref=ASAP:ABE-0002903,UniProtKB/Swiss-Prot:P0C0U4,Genbank:NP_415373.1,EcoGene:EG10852,GeneID:945484;Name=NP_415373.1;gbkey=CDS;gene=rimK;product=ribosomal protein S6 modification protein;protein_id=NP_415373.1;transl_table=11 NC_000913.3 RefSeq gene 892957 893433 . + . ID=gene867;Dbxref=EcoGene:EG13683,GeneID:945482;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;gene_synonym=ECK0844,JW0837;locus_tag=b0853 NC_000913.3 RefSeq CDS 892957 893433 . + 0 ID=cds834;Parent=gene867;Dbxref=ASAP:ABE-0002910,UniProtKB/Swiss-Prot:P0AAY6,Genbank:NP_415374.1,EcoGene:EG13683,GeneID:945482;Name=NP_415374.1;Note=putative sensory transduction regulator;gbkey=CDS;gene=ybjN;product=negative regulator of motility%3B multicopy suppressor of coaA(Ts);protein_id=NP_415374.1;transl_table=11 NC_000913.3 RefSeq gene 893784 894896 . + . ID=gene868;Dbxref=EcoGene:EG11629,GeneID:945480;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;gene_synonym=ECK0845,JW0838;locus_tag=b0854 NC_000913.3 RefSeq CDS 893784 894896 . + 0 ID=cds835;Parent=gene868;Dbxref=ASAP:ABE-0002913,UniProtKB/Swiss-Prot:P31133,Genbank:NP_415375.1,EcoGene:EG11629,GeneID:945480;Name=NP_415375.1;Note=periplasmic putrescine-binding protein%3B permease protein;gbkey=CDS;gene=potF;product=putrescine ABC transporter periplasmic binding protein;protein_id=NP_415375.1;transl_table=11 NC_000913.3 RefSeq gene 894991 896124 . + . ID=gene869;Dbxref=EcoGene:EG11630,GeneID:945476;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;gene_synonym=ECK0846,JW5818;locus_tag=b0855 NC_000913.3 RefSeq CDS 894991 896124 . + 0 ID=cds836;Parent=gene869;Dbxref=ASAP:ABE-0002915,UniProtKB/Swiss-Prot:P31134,Genbank:NP_415376.4,EcoGene:EG11630,GeneID:945476;Name=NP_415376.4;Note=ATP-binding component of putrescine transport system;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATPase;protein_id=NP_415376.4;transl_table=11 NC_000913.3 RefSeq gene 896134 897087 . + . ID=gene870;Dbxref=EcoGene:EG11631,GeneID:945475;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;gene_synonym=ECK0847,JW0840;locus_tag=b0856 NC_000913.3 RefSeq CDS 896134 897087 . + 0 ID=cds837;Parent=gene870;Dbxref=ASAP:ABE-0002917,UniProtKB/Swiss-Prot:P31135,Genbank:NP_415377.1,EcoGene:EG11631,GeneID:945475;Name=NP_415377.1;Note=putrescine transport protein%3B permease;gbkey=CDS;gene=potH;product=putrescine ABC transporter permease;protein_id=NP_415377.1;transl_table=11 NC_000913.3 RefSeq gene 897084 897929 . + . ID=gene871;Dbxref=EcoGene:EG11632,GeneID:945485;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;gene_synonym=ECK0848,JW0841;locus_tag=b0857 NC_000913.3 RefSeq CDS 897084 897929 . + 0 ID=cds838;Parent=gene871;Dbxref=ASAP:ABE-0002919,UniProtKB/Swiss-Prot:P0AFL1,Genbank:NP_415378.1,EcoGene:EG11632,GeneID:945485;Name=NP_415378.1;Note=putrescine transport protein%3B permease;gbkey=CDS;gene=potI;product=putrescine ABC transporter permease;protein_id=NP_415378.1;transl_table=11 NC_000913.3 RefSeq gene 897989 898477 . + . ID=gene872;Dbxref=EcoGene:EG13684,GeneID:945488;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;gene_synonym=ECK0849,JW0842;locus_tag=b0858 NC_000913.3 RefSeq CDS 897989 898477 . + 0 ID=cds839;Parent=gene872;Dbxref=ASAP:ABE-0002922,UniProtKB/Swiss-Prot:P0AAZ0,Genbank:NP_415379.1,EcoGene:EG13684,GeneID:945488;Name=NP_415379.1;gbkey=CDS;gene=ybjO;product=DUF2593 family inner membrane protein;protein_id=NP_415379.1;transl_table=11 NC_000913.3 RefSeq gene 898518 899645 . + . ID=gene873;Dbxref=EcoGene:EG13427,GeneID:947260;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;gene_synonym=ECK0850,JW0843,rumB,ybjF;locus_tag=b0859 NC_000913.3 RefSeq CDS 898518 899645 . + 0 ID=cds840;Parent=gene873;Dbxref=ASAP:ABE-0002924,UniProtKB/Swiss-Prot:P75817,Genbank:NP_415380.1,EcoGene:EG13427,GeneID:947260;Name=NP_415380.1;Note=putative enzyme;gbkey=CDS;gene=rlmC;product=23S rRNA m(5)U747 methyltransferase%2C SAM-dependent;protein_id=NP_415380.1;transl_table=11 NC_000913.3 RefSeq repeat_region 899696 899793 . + . ID=id134;Note=RIP82 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 899844 900575 . - . ID=gene874;Dbxref=EcoGene:EG11628,GeneID:948981;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;gene_synonym=ECK0851,JW0844;locus_tag=b0860 NC_000913.3 RefSeq CDS 899844 900575 . - 0 ID=cds841;Parent=gene874;Dbxref=ASAP:ABE-0002927,UniProtKB/Swiss-Prot:P30860,Genbank:NP_415381.1,EcoGene:EG11628,GeneID:948981;Name=NP_415381.1;Note=arginine 3rd transport system periplasmic binding protein;gbkey=CDS;gene=artJ;product=arginine ABC transporter periplasmic binding protein;protein_id=NP_415381.1;transl_table=11 NC_000913.3 RefSeq repeat_region 900749 900835 . + . ID=id135;Note=REP83 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 900866 901534 . - . ID=gene875;Dbxref=EcoGene:EG11627,GeneID:949066;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;gene_synonym=ECK0852,JW0845;locus_tag=b0861 NC_000913.3 RefSeq CDS 900866 901534 . - 0 ID=cds842;Parent=gene875;Dbxref=ASAP:ABE-0002931,UniProtKB/Swiss-Prot:P0AE30,Genbank:NP_415382.1,EcoGene:EG11627,GeneID:949066;Name=NP_415382.1;Note=arginine 3rd transport system permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=artM;product=arginine ABC transporter permease;protein_id=NP_415382.1;transl_table=11 NC_000913.3 RefSeq gene 901534 902250 . - . ID=gene876;Dbxref=EcoGene:EG11626,GeneID:949046;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;gene_synonym=ECK0853,JW0846;locus_tag=b0862 NC_000913.3 RefSeq CDS 901534 902250 . - 0 ID=cds843;Parent=gene876;Dbxref=ASAP:ABE-0002933,UniProtKB/Swiss-Prot:P0AE34,Genbank:NP_415383.1,EcoGene:EG11626,GeneID:949046;Name=NP_415383.1;Note=arginine 3rd transport system permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=artQ;product=arginine ABC transporter permease;protein_id=NP_415383.1;transl_table=11 NC_000913.3 RefSeq gene 902257 902988 . - . ID=gene877;Dbxref=EcoGene:EG11625,GeneID:948988;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;gene_synonym=ECK0854,JW0847;locus_tag=b0863 NC_000913.3 RefSeq CDS 902257 902988 . - 0 ID=cds844;Parent=gene877;Dbxref=ASAP:ABE-0002937,UniProtKB/Swiss-Prot:P30859,Genbank:NP_415384.1,EcoGene:EG11625,GeneID:948988;Name=NP_415384.1;Note=arginine 3rd transport system periplasmic binding protein;gbkey=CDS;gene=artI;product=arginine transporter subunit;protein_id=NP_415384.1;transl_table=11 NC_000913.3 RefSeq gene 903006 903734 . - . ID=gene878;Dbxref=EcoGene:EG11624,GeneID:945489;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;gene_synonym=ECK0855,JW0848;locus_tag=b0864 NC_000913.3 RefSeq CDS 903006 903734 . - 0 ID=cds845;Parent=gene878;Dbxref=ASAP:ABE-0002939,UniProtKB/Swiss-Prot:P0AAF6,Genbank:NP_415385.1,EcoGene:EG11624,GeneID:945489;Name=NP_415385.1;Note=ATP-binding component of 3rd arginine transport system;gbkey=CDS;gene=artP;product=arginine ABC transporter ATPase;protein_id=NP_415385.1;transl_table=11 NC_000913.3 RefSeq gene 903952 904467 . - . ID=gene879;Dbxref=EcoGene:EG13685,GeneID:945491;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;gene_synonym=ECK0856,JW0849;locus_tag=b0865 NC_000913.3 RefSeq CDS 903952 904467 . - 0 ID=cds846;Parent=gene879;Dbxref=ASAP:ABE-0002941,UniProtKB/Swiss-Prot:P75818,Genbank:NP_415386.1,EcoGene:EG13685,GeneID:945491;Name=NP_415386.1;Note=putative lipoprotein;gbkey=CDS;gene=ybjP;product=lipoprotein;protein_id=NP_415386.1;transl_table=11 NC_000913.3 RefSeq gene 904593 904916 . + . ID=gene880;Dbxref=EcoGene:EG13686,GeneID:945493;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;gene_synonym=ECK0857,JW0850;locus_tag=b0866 NC_000913.3 RefSeq CDS 904593 904916 . + 0 ID=cds847;Parent=gene880;Dbxref=ASAP:ABE-0002945,UniProtKB/Swiss-Prot:P0A8C1,Genbank:NP_415387.1,EcoGene:EG13686,GeneID:945493;Name=NP_415387.1;gbkey=CDS;gene=ybjQ;product=UPF0145 family protein;protein_id=NP_415387.1;transl_table=11 NC_000913.3 RefSeq gene 904913 905743 . + . ID=gene881;Dbxref=EcoGene:EG13687,GeneID:945494;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;gene_synonym=ECK0858,JW0851,ybjR;locus_tag=b0867 NC_000913.3 RefSeq CDS 904913 905743 . + 0 ID=cds848;Parent=gene881;Dbxref=ASAP:ABE-0002947,UniProtKB/Swiss-Prot:P75820,Genbank:NP_415388.1,EcoGene:EG13687,GeneID:945494;Name=NP_415388.1;gbkey=CDS;gene=amiD;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase%2C Zn-dependent%3B OM lipoprotein;protein_id=NP_415388.1;transl_table=11 NC_000913.3 RefSeq gene 905740 906753 . - . ID=gene882;Dbxref=EcoGene:EG13688,GeneID:945495;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;gene_synonym=ECK0859,JW5819;locus_tag=b0868 NC_000913.3 RefSeq CDS 905740 906753 . - 0 ID=cds849;Parent=gene882;Dbxref=ASAP:ABE-0002949,UniProtKB/Swiss-Prot:P75821,Genbank:NP_415389.2,EcoGene:EG13688,GeneID:945495;Name=NP_415389.2;gbkey=CDS;gene=ybjS;product=putative NAD(P)H-dependent oxidoreductase;protein_id=NP_415389.2;transl_table=11 NC_000913.3 RefSeq gene 906852 908282 . - . ID=gene883;Dbxref=EcoGene:EG13689,GeneID:945496;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;gene_synonym=ECK0860,JW5116;locus_tag=b0869 NC_000913.3 RefSeq CDS 906852 908282 . - 0 ID=cds850;Parent=gene883;Dbxref=ASAP:ABE-0002951,UniProtKB/Swiss-Prot:P75822,Genbank:NP_415390.4,EcoGene:EG13689,GeneID:945496;Name=NP_415390.4;gbkey=CDS;gene=ybjT;product=putative NAD-dependent oxidoreductase;protein_id=NP_415390.4;transl_table=11 NC_000913.3 RefSeq gene 908293 909294 . - . ID=gene884;Dbxref=EcoGene:EG13690,GeneID:944955;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;gene_synonym=ECK0861,JW0854,ltaA,ybjU;locus_tag=b0870 NC_000913.3 RefSeq CDS 908293 909294 . - 0 ID=cds851;Parent=gene884;Dbxref=ASAP:ABE-0002954,UniProtKB/Swiss-Prot:P75823,Genbank:NP_415391.1,EcoGene:EG13690,GeneID:944955;Name=NP_415391.1;gbkey=CDS;gene=ltaE;product=L-allo-threonine aldolase%2C PLP-dependent;protein_id=NP_415391.1;transl_table=11 NC_000913.3 RefSeq gene 909331 911049 . - . ID=gene885;Dbxref=EcoGene:EG10754,GeneID:946132;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;gene_synonym=ECK0862,JW0855;locus_tag=b0871 NC_000913.3 RefSeq CDS 909331 911049 . - 0 ID=cds852;Parent=gene885;Dbxref=ASAP:ABE-0002958,UniProtKB/Swiss-Prot:P07003,Genbank:NP_415392.1,EcoGene:EG10754,GeneID:946132;Name=NP_415392.1;Note=pyruvate oxidase;gbkey=CDS;gene=poxB;product=pyruvate dehydrogenase%2C thiamine triphosphate-binding%2C FAD-binding;protein_id=NP_415392.1;transl_table=11 NC_000913.3 RefSeq repeat_region 911147 911172 . + . ID=id136;Note=REP84 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 911182 912150 . - . ID=gene886;Dbxref=EcoGene:EG13691,GeneID:947660;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;gene_synonym=ECK0863,JW5117,ybjV;locus_tag=b0872 NC_000913.3 RefSeq CDS 911182 912150 . - 0 ID=cds853;Parent=gene886;Dbxref=ASAP:ABE-0002960,UniProtKB/Swiss-Prot:P75824,Genbank:NP_415393.1,EcoGene:EG13691,GeneID:947660;Name=NP_415393.1;gbkey=CDS;gene=hcr;product=HCP oxidoreductase%2C NADH-dependent;protein_id=NP_415393.1;transl_table=11 NC_000913.3 RefSeq gene 912162 913814 . - . ID=gene887;Dbxref=EcoGene:EG13692,GeneID:946592;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=ECK0864,JW0857,ybjW;locus_tag=b0873 NC_000913.3 RefSeq CDS 912162 913814 . - 0 ID=cds854;Parent=gene887;Dbxref=ASAP:ABE-0002962,UniProtKB/Swiss-Prot:P75825,Genbank:NP_415394.4,EcoGene:EG13692,GeneID:946592;Name=NP_415394.4;gbkey=CDS;gene=hcp;product=hybrid-cluster [4Fe-2S-2O] subunit of anaerobic terminal reductases;protein_id=NP_415394.4;transl_table=11 NC_000913.3 RefSeq gene 913958 914857 . - . ID=gene888;Dbxref=EcoGene:EG13426,GeneID:947142;Name=ybjE;gbkey=Gene;gene=ybjE;gene_biotype=protein_coding;gene_synonym=ECK0865,JW0858;locus_tag=b0874 NC_000913.3 RefSeq CDS 913958 914857 . - 0 ID=cds855;Parent=gene888;Dbxref=ASAP:ABE-0002966,UniProtKB/Swiss-Prot:P75826,Genbank:NP_415395.2,EcoGene:EG13426,GeneID:947142;Name=NP_415395.2;Note=putative surface protein;gbkey=CDS;gene=ybjE;product=putative transporter;protein_id=NP_415395.2;transl_table=11 NC_000913.3 RefSeq gene 915352 916047 . - . ID=gene889;Dbxref=EcoGene:EG13270,GeneID:945497;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;gene_synonym=bniP,ECK0866,JW0859;locus_tag=b0875 NC_000913.3 RefSeq CDS 915352 916047 . - 0 ID=cds856;Parent=gene889;Dbxref=ASAP:ABE-0002976,UniProtKB/Swiss-Prot:P60844,Genbank:NP_415396.1,EcoGene:EG13270,GeneID:945497;Name=NP_415396.1;Note=transmembrane water channel%3B aquaporin Z;gbkey=CDS;gene=aqpZ;product=aquaporin Z;protein_id=NP_415396.1;transl_table=11 NC_000913.3 RefSeq gene 916473 918131 . + . ID=gene890;Dbxref=EcoGene:EG13425,GeneID:945498;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;gene_synonym=ECK0867,JW0860;locus_tag=b0876 NC_000913.3 RefSeq CDS 916473 918131 . + 0 ID=cds857;Parent=gene890;Dbxref=ASAP:ABE-0002980,UniProtKB/Swiss-Prot:P75828,Genbank:NP_415397.1,EcoGene:EG13425,GeneID:945498;Name=NP_415397.1;gbkey=CDS;gene=ybjD;product=putative OLD family ATP-dependent endonuclease%3B DUF2813 family protein;protein_id=NP_415397.1;transl_table=11 NC_000913.3 RefSeq gene 918128 919120 . - . ID=gene891;Dbxref=EcoGene:EG13693,GeneID:946025;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;gene_synonym=ECK0868,JW0861;locus_tag=b0877 NC_000913.3 RefSeq CDS 918128 919120 . - 0 ID=cds858;Parent=gene891;Dbxref=ASAP:ABE-0002982,UniProtKB/Swiss-Prot:P75829,Genbank:NP_415398.1,EcoGene:EG13693,GeneID:946025;Name=NP_415398.1;Note=putative enzyme;gbkey=CDS;gene=ybjX;product=DUF535 family protein;protein_id=NP_415398.1;transl_table=11 NC_000913.3 RefSeq gene 919235 920350 . + . ID=gene892;Dbxref=EcoGene:EG13694,GeneID:947322;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;gene_synonym=ECK0869,JW0862,ybjY;locus_tag=b0878 NC_000913.3 RefSeq CDS 919235 920350 . + 0 ID=cds859;Parent=gene892;Dbxref=ASAP:ABE-0002986,UniProtKB/Swiss-Prot:P75830,Genbank:NP_415399.4,EcoGene:EG13694,GeneID:947322;Name=NP_415399.4;gbkey=CDS;gene=macA;product=macrolide transporter membrane fusion protein (MFP) component;protein_id=NP_415399.4;transl_table=11 NC_000913.3 RefSeq gene 920347 922293 . + . ID=gene893;Dbxref=EcoGene:EG13695,GeneID:945164;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;gene_synonym=ECK0870,JW0863,ybjZ;locus_tag=b0879 NC_000913.3 RefSeq CDS 920347 922293 . + 0 ID=cds860;Parent=gene893;Dbxref=ASAP:ABE-0002989,UniProtKB/Swiss-Prot:P75831,Genbank:NP_415400.1,EcoGene:EG13695,GeneID:945164;Name=NP_415400.1;gbkey=CDS;gene=macB;product=macrolide ABC transporter peremase/ATPase;protein_id=NP_415400.1;transl_table=11 NC_000913.3 RefSeq gene 922366 922590 . - . ID=gene894;Dbxref=EcoGene:EG11111,GeneID:945669;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;gene_synonym=cspH,ECK0871,JW0864,ybjA;locus_tag=b0880 NC_000913.3 RefSeq CDS 922366 922590 . - 0 ID=cds861;Parent=gene894;Dbxref=ASAP:ABE-0002991,UniProtKB/Swiss-Prot:P0A968,Genbank:NP_415401.1,EcoGene:EG11111,GeneID:945669;Name=NP_415401.1;Note=stress induced DNA replication inhibitor.;gbkey=CDS;gene=cspD;product=inhibitor of DNA replication%2C cold shock protein homolog;protein_id=NP_415401.1;transl_table=11 NC_000913.3 RefSeq gene 922913 923233 . + . ID=gene895;Dbxref=EcoGene:EG14241,GeneID:948443;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;gene_synonym=ECK0872,JW0865,yljA;locus_tag=b0881 NC_000913.3 RefSeq CDS 922913 923233 . + 0 ID=cds862;Parent=gene895;Dbxref=ASAP:ABE-0002998,UniProtKB/Swiss-Prot:P0A8Q6,Genbank:NP_415402.1,EcoGene:EG14241,GeneID:948443;Name=NP_415402.1;gbkey=CDS;gene=clpS;product=regulatory protein for ClpA substrate specificity;protein_id=NP_415402.1;transl_table=11 NC_000913.3 RefSeq gene 923264 925540 . + . ID=gene896;Dbxref=EcoGene:EG10156,GeneID:945764;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;gene_synonym=ECK0873,JW0866,lopD;locus_tag=b0882 NC_000913.3 RefSeq CDS 923264 925540 . + 0 ID=cds863;Parent=gene896;Dbxref=ASAP:ABE-0003001,UniProtKB/Swiss-Prot:P0ABH9,Genbank:NP_415403.1,EcoGene:EG10156,GeneID:945764;Name=NP_415403.1;Note=ATP-binding component of serine protease;gbkey=CDS;gene=clpA;product=ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease%2C chaperone activity;protein_id=NP_415403.1;transl_table=11 NC_000913.3 RefSeq gene 925884 925971 . - . ID=gene897;Dbxref=EcoGene:EG30096,GeneID:945501;Name=serW;gbkey=Gene;gene=serW;gene_biotype=tRNA;gene_synonym=ECK0874,JWR0025;locus_tag=b0883 NC_000913.3 RefSeq tRNA 925884 925971 . - . ID=rna33;Parent=gene897;Dbxref=ASAP:ABE-0003003,EcoGene:EG30096,GeneID:945501;Note=anticodon: GGA;gbkey=tRNA;gene=serW;product=tRNA-Ser NC_000913.3 RefSeq exon 925884 925971 . - . ID=id137;Parent=rna33;Dbxref=ASAP:ABE-0003003,EcoGene:EG30096,GeneID:945501;Note=anticodon: GGA;gbkey=tRNA;gene=serW;product=tRNA-Ser NC_000913.3 RefSeq gene 926225 926443 . - . ID=gene898;Dbxref=EcoGene:EG10504,GeneID:945500;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;gene_synonym=bypA1,ECK0875,JW0867;locus_tag=b0884 NC_000913.3 RefSeq CDS 926225 926443 . - 0 ID=cds864;Parent=gene898;Dbxref=ASAP:ABE-0003005,UniProtKB/Swiss-Prot:P69222,Genbank:NP_415404.1,EcoGene:EG10504,GeneID:945500;Name=NP_415404.1;Note=protein chain initiation factor IF-1;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=NP_415404.1;transl_table=11 NC_000913.3 RefSeq gene 926728 927432 . - . ID=gene899;Dbxref=EcoGene:EG11112,GeneID:945490;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;gene_synonym=ECK0876,JW0868,ycaA;locus_tag=b0885 NC_000913.3 RefSeq CDS 926728 927432 . - 0 ID=cds865;Parent=gene899;Dbxref=ASAP:ABE-0003009,UniProtKB/Swiss-Prot:P0A8P1,Genbank:NP_415405.1,EcoGene:EG11112,GeneID:945490;Name=NP_415405.1;Note=leucyl%2C phenylalanyl-tRNA-protein transferase;gbkey=CDS;gene=aat;product=leucyl/phenylalanyl-tRNA-protein transferase;protein_id=NP_415405.1;transl_table=11 NC_000913.3 RefSeq gene 927474 929195 . - . ID=gene900;Dbxref=EcoGene:EG10012,GeneID:945504;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;gene_synonym=ECK0877,JW0869,mdrA,mdrH,surB,ycaB;locus_tag=b0886 NC_000913.3 RefSeq CDS 927474 929195 . - 0 ID=cds866;Parent=gene900;Dbxref=ASAP:ABE-0003012,UniProtKB/Swiss-Prot:P23886,Genbank:NP_415406.1,EcoGene:EG10012,GeneID:945504;Name=NP_415406.1;Note=ATP-binding component of cytochrome-related transport;gbkey=CDS;gene=cydC;product=glutathione/cysteine ABC transporter export permease/ATPase;protein_id=NP_415406.1;transl_table=11 NC_000913.3 RefSeq gene 929196 930962 . - . ID=gene901;Dbxref=EcoGene:EG11405,GeneID:949052;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;gene_synonym=ECK0878,htrD,JW0870;locus_tag=b0887 NC_000913.3 RefSeq CDS 929196 930962 . - 0 ID=cds867;Parent=gene901;Dbxref=ASAP:ABE-0003015,UniProtKB/Swiss-Prot:P29018,Genbank:NP_415407.1,EcoGene:EG11405,GeneID:949052;Name=NP_415407.1;Note=ATP-binding component of cytochrome-related transport%2C Zn sensitive;gbkey=CDS;gene=cydD;product=glutathione/cysteine ABC transporter export permease/ATPase;protein_id=NP_415407.1;transl_table=11 NC_000913.3 RefSeq gene 931085 932050 . - . ID=gene902;Dbxref=EcoGene:EG11032,GeneID:949054;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;gene_synonym=ECK0879,JW0871;locus_tag=b0888 NC_000913.3 RefSeq CDS 931085 932050 . - 0 ID=cds868;Parent=gene902;Dbxref=ASAP:ABE-0003018,UniProtKB/Swiss-Prot:P0A9P4,Genbank:NP_415408.1,EcoGene:EG11032,GeneID:949054;Name=NP_415408.1;Note=thioredoxin reductase;gbkey=CDS;gene=trxB;product=thioredoxin reductase%2C FAD/NAD(P)-binding;protein_id=NP_415408.1;transl_table=11 NC_000913.3 RefSeq gene 932595 933089 . + . ID=gene903;Dbxref=EcoGene:EG10547,GeneID:949051;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;gene_synonym=alsB,ECK0880,ihb,JW0872,livR,lrs,lss,lstR,mbf,oppI,rblA;locus_tag=b0889 NC_000913.3 RefSeq CDS 932595 933089 . + 0 ID=cds869;Parent=gene903;Dbxref=ASAP:ABE-0003023,UniProtKB/Swiss-Prot:P0ACJ0,Genbank:NP_415409.1,EcoGene:EG10547,GeneID:949051;Name=NP_415409.1;Note=regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system;gbkey=CDS;gene=lrp;product=leucine-responsive global transcriptional regulator;protein_id=NP_415409.1;transl_table=11 NC_000913.3 RefSeq gene 933224 937213 . + . ID=gene904;Dbxref=EcoGene:EG13226,GeneID:945102;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;gene_synonym=dinH,ECK0881,JW0873;locus_tag=b0890 NC_000913.3 RefSeq CDS 933224 937213 . + 0 ID=cds870;Parent=gene904;Dbxref=ASAP:ABE-0003027,UniProtKB/Swiss-Prot:P46889,Genbank:NP_415410.1,EcoGene:EG13226,GeneID:945102;Name=NP_415410.1;Note=cell division protein;gbkey=CDS;gene=ftsK;product=DNA translocase at septal ring sorting daughter chromsomes;protein_id=NP_415410.1;transl_table=11 NC_000913.3 RefSeq repeat_region 937224 937259 . + . ID=id138;Note=REP85 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 937372 937983 . + . ID=gene905;Dbxref=EcoGene:EG12684,GeneID:948989;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;gene_synonym=ECK0882,JW0874,lplA,yzzV;locus_tag=b0891 NC_000913.3 RefSeq CDS 937372 937983 . + 0 ID=cds871;Parent=gene905;Dbxref=ASAP:ABE-0003031,UniProtKB/Swiss-Prot:P61316,Genbank:NP_415411.2,EcoGene:EG12684,GeneID:948989;Name=NP_415411.2;Note=periplasmic protein effects translocation of lipoproteins from inner membrane to outer;gbkey=CDS;gene=lolA;product=lipoprotein chaperone;protein_id=NP_415411.2;transl_table=11 NC_000913.3 RefSeq gene 937994 939337 . + . ID=gene906;Dbxref=EcoGene:EG12690,GeneID:945505;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=ECK0883,JW0875,mgsA,ycaJ;locus_tag=b0892 NC_000913.3 RefSeq CDS 937994 939337 . + 0 ID=cds872;Parent=gene906;Dbxref=ASAP:ABE-0003034,UniProtKB/Swiss-Prot:P0AAZ4,Genbank:NP_415412.1,EcoGene:EG12690,GeneID:945505;Name=NP_415412.1;Note=putative polynucleotide enzyme;gbkey=CDS;gene=rarA;product=recombination intermediate processing DNA-dependent ATPase;protein_id=NP_415412.1;transl_table=11 NC_000913.3 RefSeq gene 939428 940720 . + . ID=gene907;Dbxref=EcoGene:EG10947,GeneID:945506;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;gene_synonym=ECK0884,JW0876;locus_tag=b0893 NC_000913.3 RefSeq CDS 939428 940720 . + 0 ID=cds873;Parent=gene907;Dbxref=ASAP:ABE-0003038,UniProtKB/Swiss-Prot:P0A8L1,Genbank:NP_415413.1,EcoGene:EG10947,GeneID:945506;Name=NP_415413.1;Note=serine tRNA synthetase%3B also charges selenocystein tRNA with serine;gbkey=CDS;gene=serS;product=seryl-tRNA synthetase;protein_id=NP_415413.1;transl_table=11 NC_000913.3 RefSeq gene 940959 943403 . + . ID=gene908;Dbxref=EcoGene:EG10232,GeneID:945508;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;gene_synonym=ECK0885,JW5118;locus_tag=b0894 NC_000913.3 RefSeq CDS 940959 943403 . + 0 ID=cds874;Parent=gene908;Dbxref=ASAP:ABE-0003044,UniProtKB/Swiss-Prot:P18775,Genbank:NP_415414.4,EcoGene:EG10232,GeneID:945508;Name=NP_415414.4;Note=anaerobic dimethyl sulfoxide reductase subunit A;gbkey=CDS;gene=dmsA;product=dimethyl sulfoxide reductase%2C anaerobic%2C subunit A;protein_id=NP_415414.4;transl_table=11 NC_000913.3 RefSeq gene 943414 944031 . + . ID=gene909;Dbxref=EcoGene:EG10233,GeneID:945507;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;gene_synonym=ECK0886,JW0878;locus_tag=b0895 NC_000913.3 RefSeq CDS 943414 944031 . + 0 ID=cds875;Parent=gene909;Dbxref=ASAP:ABE-0003046,UniProtKB/Swiss-Prot:P18776,Genbank:NP_415415.1,EcoGene:EG10233,GeneID:945507;Name=NP_415415.1;Note=anaerobic dimethyl sulfoxide reductase subunit B;gbkey=CDS;gene=dmsB;product=dimethyl sulfoxide reductase%2C anaerobic%2C subunit B;protein_id=NP_415415.1;transl_table=11 NC_000913.3 RefSeq gene 944033 944896 . + . ID=gene910;Dbxref=EcoGene:EG10234,GeneID:945502;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;gene_synonym=ECK0887,JW0879;locus_tag=b0896 NC_000913.3 RefSeq CDS 944033 944896 . + 0 ID=cds876;Parent=gene910;Dbxref=ASAP:ABE-0003048,UniProtKB/Swiss-Prot:P18777,Genbank:NP_415416.1,EcoGene:EG10234,GeneID:945502;Name=NP_415416.1;Note=anaerobic dimethyl sulfoxide reductase subunit C;gbkey=CDS;gene=dmsC;product=dimethyl sulfoxide reductase%2C anaerobic%2C subunit C;protein_id=NP_415416.1;transl_table=11 NC_000913.3 RefSeq gene 944931 945557 . - . ID=gene911;Dbxref=EcoGene:EG11241,GeneID:945512;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;gene_synonym=ECK0888,JW0880;locus_tag=b0897 NC_000913.3 RefSeq CDS 944931 945557 . - 0 ID=cds877;Parent=gene911;Dbxref=ASAP:ABE-0003050,UniProtKB/Swiss-Prot:P21367,Genbank:NP_415417.1,EcoGene:EG11241,GeneID:945512;Name=NP_415417.1;gbkey=CDS;gene=ycaC;product=putative isochorismatase family hydrolase;protein_id=NP_415417.1;transl_table=11 NC_000913.3 RefSeq gene 945871 947019 . + . ID=gene912;Dbxref=EcoGene:EG11242,GeneID:945515;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;gene_synonym=ECK0889,JW0881;locus_tag=b0898 NC_000913.3 RefSeq CDS 945871 947019 . + 0 ID=cds878;Parent=gene912;Dbxref=ASAP:ABE-0003056,UniProtKB/Swiss-Prot:P21503,Genbank:NP_415418.1,EcoGene:EG11242,GeneID:945515;Name=NP_415418.1;gbkey=CDS;gene=ycaD;product=putative MFS transporter%2C inner membrane protein;protein_id=NP_415418.1;transl_table=11 NC_000913.3 RefSeq gene 947229 948659 . + . ID=gene913;Dbxref=EcoGene:EG13697,GeneID:945518;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;gene_synonym=ECK0890,JW5119;locus_tag=b0899 NC_000913.3 RefSeq CDS 947229 948659 . + 0 ID=cds879;Parent=gene913;Dbxref=ASAP:ABE-0003058,UniProtKB/Swiss-Prot:P75835,Genbank:NP_415419.2,EcoGene:EG13697,GeneID:945518;Name=NP_415419.2;gbkey=CDS;gene=ycaM;product=putative transporter;protein_id=NP_415419.2;transl_table=11 NC_000913.3 RefSeq gene 948660 949568 . - . ID=gene914;Dbxref=EcoGene:EG13698,GeneID:945523;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;gene_synonym=ECK0891,JW0883;locus_tag=b0900 NC_000913.3 RefSeq CDS 948660 949568 . - 0 ID=cds880;Parent=gene914;Dbxref=ASAP:ABE-0003060,UniProtKB/Swiss-Prot:P75836,Genbank:NP_415420.1,EcoGene:EG13698,GeneID:945523;Name=NP_415420.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ycaN;product=LysR family putative transcriptional regulator;protein_id=NP_415420.1;transl_table=11 NC_000913.3 RefSeq gene 949668 950258 . + . ID=gene915;Dbxref=EcoGene:EG12702,GeneID:945520;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=protein_coding;gene_synonym=ECK0892,JW0884;locus_tag=b0901 NC_000913.3 RefSeq CDS 949668 950258 . + 0 ID=cds881;Parent=gene915;Dbxref=ASAP:ABE-0003065,UniProtKB/Swiss-Prot:P43340,Genbank:NP_415421.1,EcoGene:EG12702,GeneID:945520;Name=NP_415421.1;gbkey=CDS;gene=ycaK;product=putative NAD(P)H-dependent oxidoreductase;protein_id=NP_415421.1;transl_table=11 NC_000913.3 RefSeq gene 950340 951080 . - . ID=gene916;Dbxref=EcoGene:EG10028,GeneID:945517;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;gene_synonym=act,ECK0893,JW0885;locus_tag=b0902 NC_000913.3 RefSeq CDS 950340 951080 . - 0 ID=cds882;Parent=gene916;Dbxref=ASAP:ABE-0003068,UniProtKB/Swiss-Prot:P0A9N4,Genbank:NP_415422.1,EcoGene:EG10028,GeneID:945517;Name=NP_415422.1;gbkey=CDS;gene=pflA;product=pyruvate formate-lyase 1-activating enzyme%3B [formate-C-acetyltransferase 1]-activating enzyme%3B PFL activase;protein_id=NP_415422.1;transl_table=11 NC_000913.3 RefSeq gene 951272 953554 . - . ID=gene917;Dbxref=EcoGene:EG10701,GeneID:945514;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;gene_synonym=ECK0894,JW0886,pfl;locus_tag=b0903 NC_000913.3 RefSeq CDS 951272 953554 . - 0 ID=cds883;Parent=gene917;Dbxref=ASAP:ABE-0003071,UniProtKB/Swiss-Prot:P09373,Genbank:NP_415423.1,EcoGene:EG10701,GeneID:945514;Name=NP_415423.1;Note=formate acetyltransferase 1;gbkey=CDS;gene=pflB;product=formate C-acetyltransferase 1%2C anaerobic%3B pyruvate formate-lyase 1;protein_id=NP_415423.1;transl_table=11 NC_000913.3 RefSeq gene 953609 954466 . - . ID=gene918;Dbxref=EcoGene:EG11258,GeneID:945513;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;gene_synonym=ECK0895,JW0887,ycaE;locus_tag=b0904 NC_000913.3 RefSeq CDS 953609 954466 . - 0 ID=cds884;Parent=gene918;Dbxref=ASAP:ABE-0003073,UniProtKB/Swiss-Prot:P0AC23,Genbank:NP_415424.1,EcoGene:EG11258,GeneID:945513;Name=NP_415424.1;Note=probable formate transporter (formate channel 1);gbkey=CDS;gene=focA;product=formate channel;protein_id=NP_415424.1;transl_table=11 NC_000913.3 RefSeq gene 954872 956632 . - . ID=gene919;Dbxref=EcoGene:EG13699,GeneID:945509;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;gene_synonym=ECK0896,JW0888;locus_tag=b0905 NC_000913.3 RefSeq CDS 954872 956632 . - 0 ID=cds885;Parent=gene919;Dbxref=ASAP:ABE-0003081,UniProtKB/Swiss-Prot:P75838,Genbank:NP_415425.4,EcoGene:EG13699,GeneID:945509;Name=NP_415425.4;gbkey=CDS;gene=ycaO;product=ribosomal protein S12 methylthiotransferase accessory factor;protein_id=NP_415425.4;transl_table=11 NC_000913.3 RefSeq gene 956762 957454 . + . ID=gene920;Dbxref=EcoGene:EG13700,GeneID:945525;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;gene_synonym=ECK0897,JW0889;locus_tag=b0906 NC_000913.3 RefSeq CDS 956762 957454 . + 0 ID=cds886;Parent=gene920;Dbxref=ASAP:ABE-0003089,UniProtKB/Swiss-Prot:P75839,Genbank:NP_415426.1,EcoGene:EG13700,GeneID:945525;Name=NP_415426.1;gbkey=CDS;gene=ycaP;product=UPF0702 family putative inner membrane protein;protein_id=NP_415426.1;transl_table=11 NC_000913.3 RefSeq gene 957653 958741 . + . ID=gene921;Dbxref=EcoGene:EG10946,GeneID:945527;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;gene_synonym=ECK0898,JW0890,pdxC,pdxF;locus_tag=b0907 NC_000913.3 RefSeq CDS 957653 958741 . + 0 ID=cds887;Parent=gene921;Dbxref=ASAP:ABE-0003093,UniProtKB/Swiss-Prot:P23721,Genbank:NP_415427.1,EcoGene:EG10946,GeneID:945527;Name=NP_415427.1;Note=3-phosphoserine aminotransferase;gbkey=CDS;gene=serC;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=NP_415427.1;transl_table=11 NC_000913.3 RefSeq gene 958812 960095 . + . ID=gene922;Dbxref=EcoGene:EG10073,GeneID:945528;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;gene_synonym=ECK0899,JW0891;locus_tag=b0908 NC_000913.3 RefSeq CDS 958812 960095 . + 0 ID=cds888;Parent=gene922;Dbxref=ASAP:ABE-0003095,UniProtKB/Swiss-Prot:P0A6D3,Genbank:NP_415428.1,EcoGene:EG10073,GeneID:945528;Name=NP_415428.1;gbkey=CDS;gene=aroA;product=5-enolpyruvylshikimate-3-phosphate synthetase;protein_id=NP_415428.1;transl_table=11 NC_000913.3 RefSeq gene 960264 961028 . + . ID=gene923;Dbxref=EcoGene:EG13133,GeneID:945534;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;gene_synonym=ECK0900,JW0892;locus_tag=b0909 NC_000913.3 RefSeq CDS 960264 961028 . + 0 ID=cds889;Parent=gene923;Dbxref=ASAP:ABE-0003098,UniProtKB/Swiss-Prot:P43674,Genbank:NP_415429.2,EcoGene:EG13133,GeneID:945534;Name=NP_415429.2;Note=putative heat shock protein;gbkey=CDS;gene=ycaL;product=putative peptidase-related chaperone;protein_id=NP_415429.2;transl_table=11 NC_000913.3 RefSeq gene 961201 961884 . + . ID=gene924;Dbxref=EcoGene:EG11265,GeneID:945535;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;gene_synonym=ECK0901,JW0893,mssA,ycaF,ycaG;locus_tag=b0910 NC_000913.3 RefSeq CDS 961201 961884 . + 0 ID=cds890;Parent=gene924;Dbxref=ASAP:ABE-0003101,UniProtKB/Swiss-Prot:P0A6I0,Genbank:NP_415430.1,EcoGene:EG11265,GeneID:945535;Name=NP_415430.1;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=NP_415430.1;transl_table=11 NC_000913.3 RefSeq gene 961995 963668 . + . ID=gene925;Dbxref=EcoGene:EG10900,GeneID:945536;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;gene_synonym=ECK0902,JW0894,ssyF;locus_tag=b0911 NC_000913.3 RefSeq CDS 961995 963668 . + 0 ID=cds891;Parent=gene925;Dbxref=ASAP:ABE-0003104,UniProtKB/Swiss-Prot:P0AG67,Genbank:NP_415431.1,EcoGene:EG10900,GeneID:945536;Name=NP_415431.1;gbkey=CDS;gene=rpsA;product=30S ribosomal subunit protein S1;protein_id=NP_415431.1;transl_table=11 NC_000913.3 RefSeq gene 963828 964112 . + . ID=gene926;Dbxref=EcoGene:EG10441,GeneID:945533;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;gene_synonym=ECK0903,himD,hip,JW0895;locus_tag=b0912 NC_000913.3 RefSeq CDS 963828 964112 . + 0 ID=cds892;Parent=gene926;Dbxref=ASAP:ABE-0003107,UniProtKB/Swiss-Prot:P0A6Y1,Genbank:NP_415432.1,EcoGene:EG10441,GeneID:945533;Name=NP_415432.1;Note=integration host factor (IHF)%2C beta subunit%3B site-specific recombination;gbkey=CDS;gene=ihfB;product=integration host factor (IHF)%2C DNA-binding protein%2C beta subunit;protein_id=NP_415432.1;transl_table=11 NC_000913.3 RefSeq gene 964320 966584 . + . ID=gene927;Dbxref=EcoGene:EG12375,GeneID:945531;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;gene_synonym=ECK0904,JW5120;locus_tag=b0913 NC_000913.3 RefSeq CDS 964320 966584 . + 0 ID=cds893;Parent=gene927;Dbxref=ASAP:ABE-0003111,UniProtKB/Swiss-Prot:P37443,Genbank:NP_415433.4,EcoGene:EG12375,GeneID:945531;Name=NP_415433.4;gbkey=CDS;gene=ycaI;product=ComEC family inner membrane protein;protein_id=NP_415433.4;transl_table=11 NC_000913.3 RefSeq gene 966621 968369 . + . ID=gene928;Dbxref=EcoGene:EG10613,GeneID:945530;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;gene_synonym=ECK0905,JW0897;locus_tag=b0914 NC_000913.3 RefSeq CDS 966621 968369 . + 0 ID=cds894;Parent=gene928;Dbxref=ASAP:ABE-0003113,UniProtKB/Swiss-Prot:P60752,Genbank:NP_415434.1,EcoGene:EG10613,GeneID:945530;Name=NP_415434.1;Note=ATP-binding transport protein%3B multicopy suppressor of htrB;gbkey=CDS;gene=msbA;product=lipid ABC transporter permease/ATPase;protein_id=NP_415434.1;transl_table=11 NC_000913.3 RefSeq gene 968366 969352 . + . ID=gene929;Dbxref=EcoGene:EG11409,GeneID:945526;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;gene_synonym=ECK0906,JW0898,ycaH;locus_tag=b0915 NC_000913.3 RefSeq CDS 968366 969352 . + 0 ID=cds895;Parent=gene929;Dbxref=ASAP:ABE-0003115,UniProtKB/Swiss-Prot:P27300,Genbank:NP_415435.1,EcoGene:EG11409,GeneID:945526;Name=NP_415435.1;gbkey=CDS;gene=lpxK;product=lipid A 4'kinase;protein_id=NP_415435.1;transl_table=11 NC_000913.3 RefSeq gene 969389 970621 . + . ID=gene930;Dbxref=EcoGene:EG13701,GeneID:945524;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;gene_synonym=ECK0907,JW0899;locus_tag=b0916 NC_000913.3 RefSeq CDS 969389 970621 . + 0 ID=cds896;Parent=gene930;Dbxref=ASAP:ABE-0003117,UniProtKB/Swiss-Prot:P75843,Genbank:NP_415436.1,EcoGene:EG13701,GeneID:945524;Name=NP_415436.1;gbkey=CDS;gene=ycaQ;product=DUF1006 family protein with C-terminal wHTH domain;protein_id=NP_415436.1;transl_table=11 NC_000913.3 RefSeq gene 970673 970855 . + . ID=gene931;Dbxref=EcoGene:EG14287,GeneID:945537;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;gene_synonym=ECK0908,JW0900;locus_tag=b0917 NC_000913.3 RefSeq CDS 970673 970855 . + 0 ID=cds897;Parent=gene931;Dbxref=ASAP:ABE-0003120,UniProtKB/Swiss-Prot:P0AAZ7,Genbank:NP_415437.1,EcoGene:EG14287,GeneID:945537;Name=NP_415437.1;gbkey=CDS;gene=ycaR;product=peroxide and acid resistance protein%2C UPF0434 family;protein_id=NP_415437.1;transl_table=11 NC_000913.3 RefSeq gene 970852 971598 . + . ID=gene932;Dbxref=EcoGene:EG10519,GeneID:945539;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;gene_synonym=ECK0909,JW0901;locus_tag=b0918 NC_000913.3 RefSeq CDS 970852 971598 . + 0 ID=cds898;Parent=gene932;Dbxref=ASAP:ABE-0003122,UniProtKB/Swiss-Prot:P04951,Genbank:NP_415438.1,EcoGene:EG10519,GeneID:945539;Name=NP_415438.1;Note=CTP:CMP-3-deoxy-D-manno-octulosonate transferase;gbkey=CDS;gene=kdsB;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=NP_415438.1;transl_table=11 NC_000913.3 RefSeq gene 971752 972645 . + . ID=gene933;Dbxref=EcoGene:EG13702,GeneID:945545;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;gene_synonym=ECK0910,JW0902;locus_tag=b0919 NC_000913.3 RefSeq CDS 971752 972645 . + 0 ID=cds899;Parent=gene933;Dbxref=ASAP:ABE-0003125,UniProtKB/Swiss-Prot:P0AB03,Genbank:NP_415439.1,EcoGene:EG13702,GeneID:945545;Name=NP_415439.1;gbkey=CDS;gene=ycbJ;product=protein kinase-like domain protein;protein_id=NP_415439.1;transl_table=11 NC_000913.3 RefSeq gene 972622 973401 . - . ID=gene934;Dbxref=EcoGene:EG12166,GeneID:945546;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;gene_synonym=ECK0911,JW0903,ycbC;locus_tag=b0920 NC_000913.3 RefSeq CDS 972622 973401 . - 0 ID=cds900;Parent=gene934;Dbxref=ASAP:ABE-0003127,UniProtKB/Swiss-Prot:P0AB01,Genbank:NP_415440.1,EcoGene:EG12166,GeneID:945546;Name=NP_415440.1;gbkey=CDS;gene=elyC;product=envelope biogenesis factor%3B DUF218 superfamily protein;protein_id=NP_415440.1;transl_table=11 NC_000913.3 RefSeq gene 973537 974322 . + . ID=gene935;Dbxref=EcoGene:EG12167,GeneID:945547;Name=smtA;gbkey=Gene;gene=smtA;gene_biotype=protein_coding;gene_synonym=ECK0912,JW0904,ycbD;locus_tag=b0921 NC_000913.3 RefSeq CDS 973537 974322 . + 0 ID=cds901;Parent=gene935;Dbxref=ASAP:ABE-0003131,UniProtKB/Swiss-Prot:P36566,Genbank:NP_415441.1,EcoGene:EG12167,GeneID:945547;Name=NP_415441.1;Note=S-adenosylmethionine-dependent methyltransferase;gbkey=CDS;gene=smtA;product=putative S-adenosyl-L-methionine-dependent methyltransferase;protein_id=NP_415441.1;transl_table=11 NC_000913.3 RefSeq gene 974319 975641 . + . ID=gene936;Dbxref=EcoGene:EG12165,GeneID:945548;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;gene_synonym=ECK0913,JW0905,kicB;locus_tag=b0922 NC_000913.3 RefSeq CDS 974319 975641 . + 0 ID=cds902;Parent=gene936;Dbxref=ASAP:ABE-0003134,UniProtKB/Swiss-Prot:P60293,Genbank:NP_415442.1,EcoGene:EG12165,GeneID:945548;Name=NP_415442.1;Note=mukF protein (killing factor KICB);gbkey=CDS;gene=mukF;product=chromosome condensin MukBEF%2C kleisin-like subunit%2C binds calcium;protein_id=NP_415442.1;transl_table=11 NC_000913.3 RefSeq gene 975622 976326 . + . ID=gene937;Dbxref=EcoGene:EG11252,GeneID:945550;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;gene_synonym=ECK0914,JW0906,kicA,ycbA;locus_tag=b0923 NC_000913.3 RefSeq CDS 975622 976326 . + 0 ID=cds903;Parent=gene937;Dbxref=ASAP:ABE-0003136,UniProtKB/Swiss-Prot:P22524,Genbank:NP_415443.2,EcoGene:EG11252,GeneID:945550;Name=NP_415443.2;gbkey=CDS;gene=mukE;product=chromosome condensin MukBEF%2C MukE localization factor;protein_id=NP_415443.2;transl_table=11 NC_000913.3 RefSeq gene 976326 980786 . + . ID=gene938;Dbxref=EcoGene:EG10618,GeneID:945549;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;gene_synonym=ECK0915,JW0907;locus_tag=b0924 NC_000913.3 RefSeq CDS 976326 980786 . + 0 ID=cds904;Parent=gene938;Dbxref=ASAP:ABE-0003138,UniProtKB/Swiss-Prot:P22523,Genbank:NP_415444.1,EcoGene:EG10618,GeneID:945549;Name=NP_415444.1;Note=kinesin-like cell division protein involved in chromosome partitioning;gbkey=CDS;gene=mukB;product=chromosome condensin MukBEF%2C ATPase and DNA-binding subunit;protein_id=NP_415444.1;transl_table=11 NC_000913.3 RefSeq gene 981047 982894 . + . ID=gene939;Dbxref=EcoGene:EG11253,GeneID:945541;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;gene_synonym=ECK0916,JW0908,ycbB;locus_tag=b0925 NC_000913.3 RefSeq CDS 981047 982894 . + 0 ID=cds905;Parent=gene939;Dbxref=ASAP:ABE-0003142,UniProtKB/Swiss-Prot:P22525,Genbank:NP_415445.1,EcoGene:EG11253,GeneID:945541;Name=NP_415445.1;Note=putative amidase;gbkey=CDS;gene=ldtD;product=murein L%2CD-transpeptidase;protein_id=NP_415445.1;transl_table=11 NC_000913.3 RefSeq gene 983075 983623 . + . ID=gene940;Dbxref=EcoGene:EG13703,GeneID:945538;Name=ycbK;gbkey=Gene;gene=ycbK;gene_biotype=protein_coding;gene_synonym=ECK0917,JW0909;locus_tag=b0926 NC_000913.3 RefSeq CDS 983075 983623 . + 0 ID=cds906;Parent=gene940;Dbxref=ASAP:ABE-0003145,UniProtKB/Swiss-Prot:P0AB06,Genbank:NP_415446.1,EcoGene:EG13703,GeneID:945538;Name=NP_415446.1;gbkey=CDS;gene=ycbK;product=M15A protease-related family periplasmic protein;protein_id=NP_415446.1;transl_table=11 NC_000913.3 RefSeq gene 983650 984297 . + . ID=gene941;Dbxref=EcoGene:EG13704,GeneID:945551;Name=ycbL;gbkey=Gene;gene=ycbL;gene_biotype=protein_coding;gene_synonym=ECK0918,JW0910;locus_tag=b0927 NC_000913.3 RefSeq CDS 983650 984297 . + 0 ID=cds907;Parent=gene941;Dbxref=ASAP:ABE-0003147,UniProtKB/Swiss-Prot:P75849,Genbank:NP_415447.1,EcoGene:EG13704,GeneID:945551;Name=NP_415447.1;gbkey=CDS;gene=ycbL;product=putative metal-binding enzyme;protein_id=NP_415447.1;transl_table=11 NC_000913.3 RefSeq repeat_region 984361 984458 . + . ID=id139;Note=RIP86 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 984519 985709 . - . ID=gene942;Dbxref=EcoGene:EG10096,GeneID:945553;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;gene_synonym=ECK0919,JW0911;locus_tag=b0928 NC_000913.3 RefSeq CDS 984519 985709 . - 0 ID=cds908;Parent=gene942;Dbxref=ASAP:ABE-0003150,UniProtKB/Swiss-Prot:P00509,Genbank:NP_415448.1,EcoGene:EG10096,GeneID:945553;Name=NP_415448.1;Note=aspartate aminotransferase;gbkey=CDS;gene=aspC;product=aspartate aminotransferase%2C PLP-dependent;protein_id=NP_415448.1;transl_table=11 NC_000913.3 RefSeq gene 985894 986982 . - . ID=gene943;Dbxref=EcoGene:EG10671,GeneID:945554;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;gene_synonym=cmlB,coa,cry,ECK0920,JW0912,nfxB?,tolF;locus_tag=b0929 NC_000913.3 RefSeq CDS 985894 986982 . - 0 ID=cds909;Parent=gene943;Dbxref=ASAP:ABE-0003153,UniProtKB/Swiss-Prot:P02931,Genbank:NP_415449.1,EcoGene:EG10671,GeneID:945554;Name=NP_415449.1;Note=outer membrane protein 1a (Ia%3Bb%3BF);gbkey=CDS;gene=ompF;product=outer membrane porin 1a (Ia%3Bb%3BF);protein_id=NP_415449.1;transl_table=11 NC_000913.3 RefSeq gene 987585 988985 . - . ID=gene944;Dbxref=EcoGene:EG10094,GeneID:945555;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;gene_synonym=ECK0921,JW0913,lcs,tss;locus_tag=b0930 NC_000913.3 RefSeq CDS 987585 988985 . - 0 ID=cds910;Parent=gene944;Dbxref=ASAP:ABE-0003162,UniProtKB/Swiss-Prot:P0A8M0,Genbank:NP_415450.1,EcoGene:EG10094,GeneID:945555;Name=NP_415450.1;Note=asparagine tRNA synthetase;gbkey=CDS;gene=asnS;product=asparaginyl tRNA synthetase;protein_id=NP_415450.1;transl_table=11 NC_000913.3 RefSeq gene 989154 990356 . - . ID=gene945;Dbxref=EcoGene:EG10742,GeneID:946648;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;gene_synonym=ECK0922,JW0914;locus_tag=b0931 NC_000913.3 RefSeq CDS 989154 990356 . - 0 ID=cds911;Parent=gene945;Dbxref=ASAP:ABE-0003167,UniProtKB/Swiss-Prot:P18133,Genbank:NP_415451.1,EcoGene:EG10742,GeneID:946648;Name=NP_415451.1;gbkey=CDS;gene=pncB;product=nicotinate phosphoribosyltransferase;protein_id=NP_415451.1;transl_table=11 NC_000913.3 RefSeq gene 990622 993234 . + . ID=gene946;Dbxref=EcoGene:EG10696,GeneID:947253;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;gene_synonym=ECK0923,JW0915;locus_tag=b0932 NC_000913.3 RefSeq CDS 990622 993234 . + 0 ID=cds912;Parent=gene946;Dbxref=ASAP:ABE-0003171,UniProtKB/Swiss-Prot:P04825,Genbank:NP_415452.1,EcoGene:EG10696,GeneID:947253;Name=NP_415452.1;gbkey=CDS;gene=pepN;product=aminopeptidase N;protein_id=NP_415452.1;transl_table=11 NC_000913.3 RefSeq gene 993277 994044 . - . ID=gene947;Dbxref=EcoGene:EG12358,GeneID:947220;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;gene_synonym=ECK0924,JW0916,ycbE;locus_tag=b0933 NC_000913.3 RefSeq CDS 993277 994044 . - 0 ID=cds913;Parent=gene947;Dbxref=ASAP:ABE-0003173,UniProtKB/Swiss-Prot:P0AAI1,Genbank:NP_415453.1,EcoGene:EG12358,GeneID:947220;Name=NP_415453.1;Note=ATP-binding component of ABC superfamily;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATPase;protein_id=NP_415453.1;transl_table=11 NC_000913.3 RefSeq gene 994041 994832 . - . ID=gene948;Dbxref=EcoGene:EG13705,GeneID:947216;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;gene_synonym=ECK0925,JW5121,ycbM;locus_tag=b0934 NC_000913.3 RefSeq CDS 994041 994832 . - 0 ID=cds914;Parent=gene948;Dbxref=ASAP:ABE-0003175,UniProtKB/Swiss-Prot:P75851,Genbank:NP_415454.4,EcoGene:EG13705,GeneID:947216;Name=NP_415454.4;Note=membrane component of ABC superfamily;gbkey=CDS;gene=ssuC;product=aliphatic sulfonate ABC transporter permease;protein_id=NP_415454.4;transl_table=11 NC_000913.3 RefSeq gene 994843 995988 . - . ID=gene949;Dbxref=EcoGene:EG13706,GeneID:945557;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;gene_synonym=ECK0926,JW0918,ssi6,ycbN;locus_tag=b0935 NC_000913.3 RefSeq CDS 994843 995988 . - 0 ID=cds915;Parent=gene949;Dbxref=ASAP:ABE-0003178,UniProtKB/Swiss-Prot:P80645,Genbank:NP_415455.1,EcoGene:EG13706,GeneID:945557;Name=NP_415455.1;gbkey=CDS;gene=ssuD;product=alkanesulfonate monooxygenase%2C FMNH(2)-dependent;protein_id=NP_415455.1;transl_table=11 NC_000913.3 RefSeq gene 995985 996944 . - . ID=gene950;Dbxref=EcoGene:EG13707,GeneID:945560;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;gene_synonym=ECK0927,JW0919,ycbO;locus_tag=b0936 NC_000913.3 RefSeq CDS 995985 996944 . - 0 ID=cds916;Parent=gene950;Dbxref=ASAP:ABE-0003180,UniProtKB/Swiss-Prot:P75853,Genbank:NP_415456.4,EcoGene:EG13707,GeneID:945560;Name=NP_415456.4;Note=periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=ssuA;product=aliphatic sulfonate ABC transporter periplasmic binding protein;protein_id=NP_415456.4;transl_table=11 NC_000913.3 RefSeq gene 996937 997512 . - . ID=gene951;Dbxref=EcoGene:EG13708,GeneID:945947;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;gene_synonym=ECK0928,JW0920,ssi4,ycbP;locus_tag=b0937 NC_000913.3 RefSeq CDS 996937 997512 . - 0 ID=cds917;Parent=gene951;Dbxref=ASAP:ABE-0003182,UniProtKB/Swiss-Prot:P80644,Genbank:NP_415457.1,EcoGene:EG13708,GeneID:945947;Name=NP_415457.1;gbkey=CDS;gene=ssuE;product=NAD(P)H-dependent FMN reductase;protein_id=NP_415457.1;transl_table=11 NC_000913.3 RefSeq gene 997868 998407 . + . ID=gene952;Dbxref=EcoGene:EG13709,GeneID:948306;Name=elfA;gbkey=Gene;gene=elfA;gene_biotype=protein_coding;gene_synonym=ECK0929,JW5122,ycbQ;locus_tag=b0938 NC_000913.3 RefSeq CDS 997868 998407 . + 0 ID=cds918;Parent=gene952;Dbxref=ASAP:ABE-0003185,UniProtKB/Swiss-Prot:P75855,Genbank:NP_415458.2,EcoGene:EG13709,GeneID:948306;Name=NP_415458.2;Note=putative fimbrial-like protein;gbkey=CDS;gene=elfA;product=laminin-binding fimbrin subunit;protein_id=NP_415458.2;transl_table=11 NC_000913.3 RefSeq gene 998490 999191 . + . ID=gene953;Dbxref=EcoGene:EG13710,GeneID:946773;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;gene_synonym=ECK0930,JW0922,ycbR;locus_tag=b0939 NC_000913.3 RefSeq CDS 998490 999191 . + 0 ID=cds919;Parent=gene953;Dbxref=ASAP:ABE-0003187,UniProtKB/Swiss-Prot:P75856,Genbank:NP_415459.1,EcoGene:EG13710,GeneID:946773;Name=NP_415459.1;gbkey=CDS;gene=elfD;product=putative periplasmic pilin chaperone;protein_id=NP_415459.1;transl_table=11 NC_000913.3 RefSeq gene 999216 1001816 . + . ID=gene954;Dbxref=EcoGene:EG13711,GeneID:946934;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;gene_synonym=ECK0931,JW0923,ycbS;locus_tag=b0940 NC_000913.3 RefSeq CDS 999216 1001816 . + 0 ID=cds920;Parent=gene954;Dbxref=ASAP:ABE-0003189,UniProtKB/Swiss-Prot:P75857,Genbank:NP_415460.1,EcoGene:EG13711,GeneID:946934;Name=NP_415460.1;gbkey=CDS;gene=elfC;product=putative outer membrane fimbrial subunit export usher protein;protein_id=NP_415460.1;transl_table=11 NC_000913.3 RefSeq gene 1001807 1002877 . + . ID=gene955;Dbxref=EcoGene:EG13712,GeneID:947185;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;gene_synonym=ECK0932,JW0924,ycbT;locus_tag=b0941 NC_000913.3 RefSeq CDS 1001807 1002877 . + 0 ID=cds921;Parent=gene955;Dbxref=ASAP:ABE-0003191,UniProtKB/Swiss-Prot:P75858,Genbank:NP_415461.1,EcoGene:EG13712,GeneID:947185;Name=NP_415461.1;gbkey=CDS;gene=elfG;product=putative fimbrial-like adhesin protein;protein_id=NP_415461.1;transl_table=11 NC_000913.3 RefSeq gene 1002889 1003431 . + . ID=gene956;Dbxref=EcoGene:EG13713,GeneID:945561;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;gene_synonym=ECK0933,JW0925;locus_tag=b0942 NC_000913.3 RefSeq CDS 1002889 1003431 . + 0 ID=cds922;Parent=gene956;Dbxref=ASAP:ABE-0003193,UniProtKB/Swiss-Prot:P75859,Genbank:NP_415462.1,EcoGene:EG13713,GeneID:945561;Name=NP_415462.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=ycbU;product=putative fimbriae protein;protein_id=NP_415462.1;transl_table=11 NC_000913.3 RefSeq gene 1003439 1003954 . + . ID=gene957;Dbxref=EcoGene:EG13714,GeneID:945562;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;gene_synonym=ECK0934,JW5123;locus_tag=b0943 NC_000913.3 RefSeq CDS 1003439 1003954 . + 0 ID=cds923;Parent=gene957;Dbxref=ASAP:ABE-0003195,UniProtKB/Swiss-Prot:P75860,Genbank:NP_415463.2,EcoGene:EG13714,GeneID:945562;Name=NP_415463.2;Note=putative fimbrial-like protein;gbkey=CDS;gene=ycbV;product=putative fimbrial-like adhesin protein;protein_id=NP_415463.2;transl_table=11 NC_000913.3 RefSeq gene 1003947 1004657 . + . ID=gene958;Dbxref=EcoGene:EG12397,GeneID:945559;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;gene_synonym=ECK0935,JW5124;locus_tag=b0944 NC_000913.3 RefSeq CDS 1003947 1004657 . + 0 ID=cds924;Parent=gene958;Dbxref=ASAP:ABE-0003197,UniProtKB/Swiss-Prot:P40876,Genbank:NP_415464.4,EcoGene:EG12397,GeneID:945559;Name=NP_415464.4;gbkey=CDS;gene=ycbF;product=putative periplasmic pilin chaperone;protein_id=NP_415464.4;transl_table=11 NC_000913.3 RefSeq gene 1004768 1005778 . + . ID=gene959;Dbxref=EcoGene:EG10807,GeneID:945556;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;gene_synonym=ECK0936,JW0928;locus_tag=b0945 NC_000913.3 RefSeq CDS 1004768 1005778 . + 0 ID=cds925;Parent=gene959;Dbxref=ASAP:ABE-0003201,UniProtKB/Swiss-Prot:P0A7E1,Genbank:NP_415465.1,EcoGene:EG10807,GeneID:945556;Name=NP_415465.1;Note=dihydro-orotate dehydrogenase;gbkey=CDS;gene=pyrD;product=dihydro-orotate oxidase%2C FMN-linked;protein_id=NP_415465.1;transl_table=11 NC_000913.3 RefSeq gene 1005952 1006494 . + . ID=gene960;Dbxref=EcoGene:EG13715,GeneID:945552;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;gene_synonym=ECK0937,JW5125,ycbW;locus_tag=b0946 NC_000913.3 RefSeq CDS 1005952 1006494 . + 0 ID=cds926;Parent=gene960;Dbxref=ASAP:ABE-0003204,UniProtKB/Swiss-Prot:P75862,Genbank:NP_415466.4,EcoGene:EG13715,GeneID:945552;Name=NP_415466.4;gbkey=CDS;gene=zapC;product=FtsZ stabilizer;protein_id=NP_415466.4;transl_table=11 NC_000913.3 RefSeq gene 1006491 1007600 . - . ID=gene961;Dbxref=EcoGene:EG13716,GeneID:945563;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;gene_synonym=ECK0938,JW5126;locus_tag=b0947 NC_000913.3 RefSeq CDS 1006491 1007600 . - 0 ID=cds927;Parent=gene961;Dbxref=ASAP:ABE-0003206,UniProtKB/Swiss-Prot:P75863,Genbank:NP_415467.1,EcoGene:EG13716,GeneID:945563;Name=NP_415467.1;gbkey=CDS;gene=ycbX;product=6-N-hydroxylaminopurine detoxification oxidoreductase;protein_id=NP_415467.1;transl_table=11 NC_000913.3 RefSeq gene 1007844 1009952 . + . ID=gene962;Dbxref=EcoGene:EG13717,GeneID:945564;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;gene_synonym=ECK0939,JW0931,rlmK,rlmKL,ycbY;locus_tag=b0948 NC_000913.3 RefSeq CDS 1007844 1009952 . + 0 ID=cds928;Parent=gene962;Dbxref=ASAP:ABE-0003211,UniProtKB/Swiss-Prot:P75864,Genbank:NP_415468.1,EcoGene:EG13717,GeneID:945564;Name=NP_415468.1;Note=putative oxidoreductase;gbkey=CDS;gene=rlmL;product=23S rRNA m(2)G2445 and m(7)G2069 methyltransferases%2C SAM-dependent;protein_id=NP_415468.1;transl_table=11 NC_000913.3 RefSeq gene 1009964 1011871 . + . ID=gene963;Dbxref=EcoGene:EG13134,GeneID:945566;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;gene_synonym=ECK0940,JW0932,ycbH,ycbI;locus_tag=b0949 NC_000913.3 RefSeq CDS 1009964 1011871 . + 0 ID=cds929;Parent=gene963;Dbxref=ASAP:ABE-0003213,UniProtKB/Swiss-Prot:P43672,Genbank:NP_415469.1,EcoGene:EG13134,GeneID:945566;Name=NP_415469.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=uup;product=replication regulatory ABC-F family DNA-binding ATPase;protein_id=NP_415469.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1011919 1011947 . + . ID=id140;Note=REP87 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1012001 1013254 . + . ID=gene964;Dbxref=EcoGene:EG12965,GeneID:944999;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;gene_synonym=ECK0941,JW0933,pqi5;locus_tag=b0950 NC_000913.3 RefSeq CDS 1012001 1013254 . + 0 ID=cds930;Parent=gene964;Dbxref=ASAP:ABE-0003219,UniProtKB/Swiss-Prot:P0AFL9,Genbank:NP_415470.1,EcoGene:EG12965,GeneID:944999;Name=NP_415470.1;Note=paraquat-inducible protein A;gbkey=CDS;gene=pqiA;product=paraquat-inducible%2C SoxRS-regulated inner membrane protein;protein_id=NP_415470.1;transl_table=11 NC_000913.3 RefSeq gene 1013259 1014899 . + . ID=gene965;Dbxref=EcoGene:EG12966,GeneID:945653;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;gene_synonym=ECK0942,JW0934,pqi5;locus_tag=b0951 NC_000913.3 RefSeq CDS 1013259 1014899 . + 0 ID=cds931;Parent=gene965;Dbxref=ASAP:ABE-0003221,UniProtKB/Swiss-Prot:P43671,Genbank:NP_415471.1,EcoGene:EG12966,GeneID:945653;Name=NP_415471.1;gbkey=CDS;gene=pqiB;product=paraquat-inducible%2C SoxRS-regulated MCE domain protein;protein_id=NP_415471.1;transl_table=11 NC_000913.3 RefSeq gene 1014896 1015459 . + . ID=gene966;Dbxref=EcoGene:EG13719,GeneID:946972;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;gene_synonym=ECK0943,JW5127,ymbA;locus_tag=b0952 NC_000913.3 RefSeq CDS 1014896 1015459 . + 0 ID=cds932;Parent=gene966;Dbxref=ASAP:ABE-0003223,UniProtKB/Swiss-Prot:P0AB10,Genbank:NP_415472.2,EcoGene:EG13719,GeneID:946972;Name=NP_415472.2;gbkey=CDS;gene=pqiC;product=DUF330 family putative lipoprotein;protein_id=NP_415472.2;transl_table=11 NC_000913.3 RefSeq gene 1015715 1015882 . + . ID=gene967;Dbxref=EcoGene:EG50004,GeneID:945567;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;gene_synonym=ECK0944,JW0936;locus_tag=b0953 NC_000913.3 RefSeq CDS 1015715 1015882 . + 0 ID=cds933;Parent=gene967;Dbxref=ASAP:ABE-0003227,UniProtKB/Swiss-Prot:P0AFW2,Genbank:NP_415473.1,EcoGene:EG50004,GeneID:945567;Name=NP_415473.1;gbkey=CDS;gene=rmf;product=ribosome modulation factor;protein_id=NP_415473.1;transl_table=11 NC_000913.3 RefSeq gene 1015952 1016470 . - . ID=gene968;Dbxref=EcoGene:EG10273,GeneID:945568;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;gene_synonym=ECK0945,JW0937;locus_tag=b0954 NC_000913.3 RefSeq CDS 1015952 1016470 . - 0 ID=cds934;Parent=gene968;Dbxref=ASAP:ABE-0003229,UniProtKB/Swiss-Prot:P0A6Q3,Genbank:NP_415474.1,EcoGene:EG10273,GeneID:945568;Name=NP_415474.1;Note=beta-hydroxydecanoyl thioester dehydrase%2C trans-2-decenoyl-ACP isomerase;gbkey=CDS;gene=fabA;product=beta-hydroxydecanoyl thioester dehydrase;protein_id=NP_415474.1;transl_table=11 NC_000913.3 RefSeq gene 1016539 1018299 . - . ID=gene969;Dbxref=EcoGene:EG13718,GeneID:945569;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;gene_synonym=ECK0946,JW0938;locus_tag=b0955 NC_000913.3 RefSeq CDS 1016539 1018299 . - 0 ID=cds935;Parent=gene969;Dbxref=ASAP:ABE-0003233,UniProtKB/Swiss-Prot:P75867,Genbank:NP_415475.1,EcoGene:EG13718,GeneID:945569;Name=NP_415475.1;Note=putative ATP-dependent protease;gbkey=CDS;gene=ycbZ;product=putative peptidase;protein_id=NP_415475.1;transl_table=11 NC_000913.3 RefSeq gene 1018485 1018937 . + . ID=gene970;Dbxref=EcoGene:EG12855,GeneID:945570;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;gene_synonym=ECK0947,JW0939,ycbG;locus_tag=b0956 NC_000913.3 RefSeq CDS 1018485 1018937 . + 0 ID=cds936;Parent=gene970;Dbxref=ASAP:ABE-0003238,UniProtKB/Swiss-Prot:P0A8N0,Genbank:NP_415476.1,EcoGene:EG12855,GeneID:945570;Name=NP_415476.1;Note=putative dehydrogenase;gbkey=CDS;gene=matP;product=Ter macrodomain organizer matS-binding protein;protein_id=NP_415476.1;transl_table=11 NC_000913.3 RefSeq gene 1019013 1020053 . - . ID=gene971;Dbxref=EcoGene:EG10669,GeneID:945571;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;gene_synonym=con,ECK0948,JW0940,tolG,tut;locus_tag=b0957 NC_000913.3 RefSeq CDS 1019013 1020053 . - 0 ID=cds937;Parent=gene971;Dbxref=ASAP:ABE-0003240,UniProtKB/Swiss-Prot:P0A910,Genbank:NP_415477.1,EcoGene:EG10669,GeneID:945571;Name=NP_415477.1;Note=outer membrane protein 3a (II*%3BG%3Bd);gbkey=CDS;gene=ompA;product=outer membrane protein A (3a%3BII*%3BG%3Bd);protein_id=NP_415477.1;transl_table=11 NC_000913.3 RefSeq gene 1020410 1020919 . - . ID=gene972;Dbxref=EcoGene:EG10984,GeneID:947335;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;gene_synonym=ECK0949,JW0941,sfiA;locus_tag=b0958 NC_000913.3 RefSeq CDS 1020410 1020919 . - 0 ID=cds938;Parent=gene972;Dbxref=ASAP:ABE-0003244,UniProtKB/Swiss-Prot:P0AFZ5,Genbank:NP_415478.1,EcoGene:EG10984,GeneID:947335;Name=NP_415478.1;Note=suppressor of lon%3B inhibits cell division and ftsZ ring formation;gbkey=CDS;gene=sulA;product=SOS cell division inhibitor;protein_id=NP_415478.1;transl_table=11 NC_000913.3 RefSeq gene 1021138 1021767 . + . ID=gene973;Dbxref=EcoGene:EG13720,GeneID:946504;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;gene_synonym=ECK0950,JW0942,tfoX,yccR;locus_tag=b0959 NC_000913.3 RefSeq CDS 1021138 1021767 . + 0 ID=cds939;Parent=gene973;Dbxref=ASAP:ABE-0003249,UniProtKB/Swiss-Prot:P75869,Genbank:NP_415479.1,EcoGene:EG13720,GeneID:946504;Name=NP_415479.1;gbkey=CDS;gene=sxy;product=CRP-S-dependent promoter expression factor;protein_id=NP_415479.1;transl_table=11 NC_000913.3 RefSeq gene 1021730 1023883 . - . ID=gene974;Dbxref=EcoGene:EG13721,GeneID:947001;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;gene_synonym=ECK0951,JW5128;locus_tag=b0960 NC_000913.3 RefSeq CDS 1021730 1023883 . - 0 ID=cds940;Parent=gene974;Dbxref=ASAP:ABE-0003251,UniProtKB/Swiss-Prot:P75870,Genbank:NP_415480.2,EcoGene:EG13721,GeneID:947001;Name=NP_415480.2;gbkey=CDS;gene=yccS;product=putative transporter%2C FUSC superfamily inner membrane protein;protein_id=NP_415480.2;transl_table=11 NC_000913.3 RefSeq gene 1023902 1024348 . - . ID=gene975;Dbxref=EcoGene:EG12306,GeneID:945594;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;gene_synonym=ECK0952,JW0944;locus_tag=b0961 NC_000913.3 RefSeq CDS 1023902 1024348 . - 0 ID=cds941;Parent=gene975;Dbxref=ASAP:ABE-0003253,UniProtKB/Swiss-Prot:P0AB12,Genbank:NP_415481.1,EcoGene:EG12306,GeneID:945594;Name=NP_415481.1;gbkey=CDS;gene=yccF;product=DUF307 family inner membrane protein;protein_id=NP_415481.1;transl_table=11 NC_000913.3 RefSeq gene 1024471 1026525 . + . ID=gene976;Dbxref=EcoGene:EG10426,GeneID:946227;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;gene_synonym=ECK0953,JW0945,srjB;locus_tag=b0962 NC_000913.3 RefSeq CDS 1024471 1026525 . + 0 ID=cds942;Parent=gene976;Dbxref=ASAP:ABE-0003257,UniProtKB/Swiss-Prot:P15038,Genbank:NP_415482.1,EcoGene:EG10426,GeneID:946227;Name=NP_415482.1;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=NP_415482.1;transl_table=11 NC_000913.3 RefSeq gene 1026557 1027015 . - . ID=gene977;Dbxref=EcoGene:EG12307,GeneID:945574;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;gene_synonym=ECK0954,JW5129,mgs,yccG;locus_tag=b0963 NC_000913.3 RefSeq CDS 1026557 1027015 . - 0 ID=cds943;Parent=gene977;Dbxref=ASAP:ABE-0003259,UniProtKB/Swiss-Prot:P0A731,Genbank:NP_415483.2,EcoGene:EG12307,GeneID:945574;Name=NP_415483.2;gbkey=CDS;gene=mgsA;product=methylglyoxal synthase;protein_id=NP_415483.2;transl_table=11 NC_000913.3 RefSeq gene 1027111 1027773 . - . ID=gene978;Dbxref=EcoGene:EG13722,GeneID:945577;Name=yccT;gbkey=Gene;gene=yccT;gene_biotype=protein_coding;gene_synonym=ECK0955,JW0947;locus_tag=b0964 NC_000913.3 RefSeq CDS 1027111 1027773 . - 0 ID=cds944;Parent=gene978;Dbxref=ASAP:ABE-0003262,UniProtKB/Swiss-Prot:P0A8X4,Genbank:NP_415484.1,EcoGene:EG13722,GeneID:945577;Name=NP_415484.1;gbkey=CDS;gene=yccT;product=UPF0319 family protein;protein_id=NP_415484.1;transl_table=11 NC_000913.3 RefSeq gene 1027946 1028359 . + . ID=gene979;Dbxref=EcoGene:EG13723,GeneID:949008;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;gene_synonym=ECK0956,JW5130;locus_tag=b0965 NC_000913.3 RefSeq CDS 1027946 1028359 . + 0 ID=cds945;Parent=gene979;Dbxref=ASAP:ABE-0003267,UniProtKB/Swiss-Prot:P75874,Genbank:NP_415485.4,EcoGene:EG13723,GeneID:949008;Name=NP_415485.4;gbkey=CDS;gene=yccU;product=putative CoA-binding protein;protein_id=NP_415485.4;transl_table=11 NC_000913.3 RefSeq repeat_region 1028366 1028389 . + . ID=id141;Note=REP88 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1028404 1028721 . - . ID=gene980;Dbxref=EcoGene:EG13724,GeneID:945578;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;gene_synonym=ECK0957,JW5970,yccV;locus_tag=b0966 NC_000913.3 RefSeq CDS 1028404 1028721 . - 0 ID=cds946;Parent=gene980;Dbxref=ASAP:ABE-0003269,UniProtKB/Swiss-Prot:P0AB20,Genbank:NP_415486.4,EcoGene:EG13724,GeneID:945578;Name=NP_415486.4;gbkey=CDS;gene=hspQ;product=heat shock protein involved in degradation of mutant DnaA%3B hemimethylated oriC DNA-binding protein;protein_id=NP_415486.4;transl_table=11 NC_000913.3 RefSeq gene 1028779 1029969 . - . ID=gene981;Dbxref=EcoGene:EG13725,GeneID:946691;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;gene_synonym=ECK0958,JW5898,yccW;locus_tag=b0967 NC_000913.3 RefSeq CDS 1028779 1029969 . - 0 ID=cds947;Parent=gene981;Dbxref=ASAP:ABE-0003272,UniProtKB/Swiss-Prot:P75876,Genbank:NP_415487.4,EcoGene:EG13725,GeneID:946691;Name=NP_415487.4;Note=putative oxidoreductase;gbkey=CDS;gene=rlmI;product=23S rRNA m(5)C1962 methyltransferase%2C SAM-dependent;protein_id=NP_415487.4;transl_table=11 NC_000913.3 RefSeq gene 1030064 1030342 . + . ID=gene982;Dbxref=EcoGene:EG13726,GeneID:945304;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;gene_synonym=ECK0959,JW5131;locus_tag=b0968 NC_000913.3 RefSeq CDS 1030064 1030342 . + 0 ID=cds948;Parent=gene982;Dbxref=ASAP:ABE-0003276,UniProtKB/Swiss-Prot:P0AB65,Genbank:NP_415488.1,EcoGene:EG13726,GeneID:945304;Name=NP_415488.1;gbkey=CDS;gene=yccX;product=weak acylphosphatase;protein_id=NP_415488.1;transl_table=11 NC_000913.3 RefSeq gene 1030339 1030668 . - . ID=gene983;Dbxref=EcoGene:EG12876,GeneID:945023;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;gene_synonym=ECK0960,JW0952,yccK;locus_tag=b0969 NC_000913.3 RefSeq CDS 1030339 1030668 . - 0 ID=cds949;Parent=gene983;Dbxref=ASAP:ABE-0003278,UniProtKB/Swiss-Prot:P0AB18,Genbank:NP_415489.4,EcoGene:EG12876,GeneID:945023;Name=NP_415489.4;Note=putative sulfite reductase;gbkey=CDS;gene=tusE;product=mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase;protein_id=NP_415489.4;transl_table=11 NC_000913.3 RefSeq gene 1030759 1031418 . - . ID=gene984;Dbxref=EcoGene:EG11113,GeneID:946016;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;gene_synonym=ECK0961,JW0953;locus_tag=b0970 NC_000913.3 RefSeq CDS 1030759 1031418 . - 0 ID=cds950;Parent=gene984;Dbxref=ASAP:ABE-0003280,UniProtKB/Swiss-Prot:P0AAC6,Genbank:NP_415490.1,EcoGene:EG11113,GeneID:946016;Name=NP_415490.1;Note=putative carrier/transport protein;gbkey=CDS;gene=yccA;product=Modulator of FtsH protease%2C inner membrane protein;protein_id=NP_415490.1;transl_table=11 NC_000913.3 RefSeq gene 1031625 1031712 . - . ID=gene985;Dbxref=EcoGene:EG30093,GeneID:944826;Name=serT;gbkey=Gene;gene=serT;gene_biotype=tRNA;gene_synonym=divE,ECK0962,JWR0026;locus_tag=b0971 NC_000913.3 RefSeq tRNA 1031625 1031712 . - . ID=rna34;Parent=gene985;Dbxref=ASAP:ABE-0003283,EcoGene:EG30093,GeneID:944826;Note=anticodon: UGA;gbkey=tRNA;gene=serT;product=tRNA-Ser NC_000913.3 RefSeq exon 1031625 1031712 . - . ID=id142;Parent=rna34;Dbxref=ASAP:ABE-0003283,EcoGene:EG30093,GeneID:944826;Note=anticodon: UGA;gbkey=tRNA;gene=serT;product=tRNA-Ser NC_000913.3 RefSeq gene 1032139 1033257 . + . ID=gene986;Dbxref=EcoGene:EG10468,GeneID:945579;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;gene_synonym=ECK0963,JW0954;locus_tag=b0972 NC_000913.3 RefSeq CDS 1032139 1033257 . + 0 ID=cds951;Parent=gene986;Dbxref=ASAP:ABE-0003286,UniProtKB/Swiss-Prot:P69739,Genbank:NP_415491.1,EcoGene:EG10468,GeneID:945579;Name=NP_415491.1;Note=hydrogenase-1 small subunit;gbkey=CDS;gene=hyaA;product=hydrogenase 1%2C small subunit;protein_id=NP_415491.1;transl_table=11 NC_000913.3 RefSeq gene 1033254 1035047 . + . ID=gene987;Dbxref=EcoGene:EG10469,GeneID:945580;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;gene_synonym=ECK0964,JW0955;locus_tag=b0973 NC_000913.3 RefSeq CDS 1033254 1035047 . + 0 ID=cds952;Parent=gene987;Dbxref=ASAP:ABE-0003288,UniProtKB/Swiss-Prot:P0ACD8,Genbank:NP_415492.1,EcoGene:EG10469,GeneID:945580;Name=NP_415492.1;Note=hydrogenase-1 large subunit;gbkey=CDS;gene=hyaB;product=hydrogenase 1%2C large subunit;protein_id=NP_415492.1;transl_table=11 NC_000913.3 RefSeq gene 1035066 1035773 . + . ID=gene988;Dbxref=EcoGene:EG10470,GeneID:945581;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;gene_synonym=ECK0965,JW0956;locus_tag=b0974 NC_000913.3 RefSeq CDS 1035066 1035773 . + 0 ID=cds953;Parent=gene988;Dbxref=ASAP:ABE-0003290,UniProtKB/Swiss-Prot:P0AAM1,Genbank:NP_415493.1,EcoGene:EG10470,GeneID:945581;Name=NP_415493.1;Note=probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit;gbkey=CDS;gene=hyaC;product=hydrogenase 1%2C b-type cytochrome subunit;protein_id=NP_415493.1;transl_table=11 NC_000913.3 RefSeq gene 1035770 1036357 . + . ID=gene989;Dbxref=EcoGene:EG10471,GeneID:945575;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;gene_synonym=ECK0966,JW0957;locus_tag=b0975 NC_000913.3 RefSeq CDS 1035770 1036357 . + 0 ID=cds954;Parent=gene989;Dbxref=ASAP:ABE-0003292,UniProtKB/Swiss-Prot:P19930,Genbank:NP_415494.1,EcoGene:EG10471,GeneID:945575;Name=NP_415494.1;Note=processing of HyaA and HyaB proteins;gbkey=CDS;gene=hyaD;product=hydrogenase 1 maturation protease;protein_id=NP_415494.1;transl_table=11 NC_000913.3 RefSeq gene 1036354 1036752 . + . ID=gene990;Dbxref=EcoGene:EG10472,GeneID:945573;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;gene_synonym=ECK0967,JW0958;locus_tag=b0976 NC_000913.3 RefSeq CDS 1036354 1036752 . + 0 ID=cds955;Parent=gene990;Dbxref=ASAP:ABE-0003294,UniProtKB/Swiss-Prot:P19931,Genbank:NP_415495.1,EcoGene:EG10472,GeneID:945573;Name=NP_415495.1;Note=processing of HyaA and HyaB proteins;gbkey=CDS;gene=hyaE;product=putative HyaA chaperone;protein_id=NP_415495.1;transl_table=11 NC_000913.3 RefSeq gene 1036749 1037606 . + . ID=gene991;Dbxref=EcoGene:EG10473,GeneID:945572;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;gene_synonym=ECK0968,JW0959;locus_tag=b0977 NC_000913.3 RefSeq CDS 1036749 1037606 . + 0 ID=cds956;Parent=gene991;Dbxref=ASAP:ABE-0003296,UniProtKB/Swiss-Prot:P19932,Genbank:NP_415496.1,EcoGene:EG10473,GeneID:945572;Name=NP_415496.1;Note=nickel incorporation into hydrogenase-1 proteins;gbkey=CDS;gene=hyaF;product=hydrogenase-1 protein nickel incorporation factor;protein_id=NP_415496.1;transl_table=11 NC_000913.3 RefSeq gene 1037740 1039284 . + . ID=gene992;Dbxref=EcoGene:EG11380,GeneID:945585;Name=cbdA;gbkey=Gene;gene=cbdA;gene_biotype=protein_coding;gene_synonym=appC,cyxA,ECK0969,JW0960;locus_tag=b0978 NC_000913.3 RefSeq CDS 1037740 1039284 . + 0 ID=cds957;Parent=gene992;Dbxref=ASAP:ABE-0003300,UniProtKB/Swiss-Prot:P26459,Genbank:NP_415497.1,EcoGene:EG11380,GeneID:945585;Name=NP_415497.1;gbkey=CDS;gene=cbdA;product=cytochrome bd-II oxidase%2C subunit I;protein_id=NP_415497.1;transl_table=11 NC_000913.3 RefSeq gene 1039296 1040432 . + . ID=gene993;Dbxref=EcoGene:EG11379,GeneID:947547;Name=cbdB;gbkey=Gene;gene=cbdB;gene_biotype=protein_coding;gene_synonym=appB,cyxB,ECK0970,JW0961;locus_tag=b0979 NC_000913.3 RefSeq CDS 1039296 1040432 . + 0 ID=cds958;Parent=gene993;Dbxref=ASAP:ABE-0003302,UniProtKB/Swiss-Prot:P26458,Genbank:NP_415498.1,EcoGene:EG11379,GeneID:947547;Name=NP_415498.1;Note=probable third cytochrome oxidase%2C subunit II;gbkey=CDS;gene=cbdB;product=cytochrome bd-II oxidase%2C subunit II;protein_id=NP_415498.1;transl_table=11 NC_000913.3 RefSeq gene 1040445 1040537 . + . ID=gene994;Dbxref=EcoGene:EG11114,GeneID:948955;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;gene_synonym=appX,ECK4402,yccB;locus_tag=b4592 NC_000913.3 RefSeq CDS 1040445 1040537 . + 0 ID=cds959;Parent=gene994;Dbxref=UniProtKB/Swiss-Prot:P24244,Genbank:YP_001165313.1,EcoGene:EG11114,GeneID:948955;Name=YP_001165313.1;gbkey=CDS;gene=cbdX;product=putative cytochrome bd-II oxidase subunit;protein_id=YP_001165313.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1040543 1040578 . + . ID=id143;Note=REP89 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1040617 1041915 . + . ID=gene995;Dbxref=EcoGene:EG10049,GeneID:946206;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;gene_synonym=ECK0971,JW0963;locus_tag=b0980 NC_000913.3 RefSeq CDS 1040617 1041915 . + 0 ID=cds960;Parent=gene995;Dbxref=ASAP:ABE-0003305,UniProtKB/Swiss-Prot:P07102,Genbank:NP_415500.1,EcoGene:EG10049,GeneID:946206;Name=NP_415500.1;Note=phosphoanhydride phosphorylase%3B pH 2.5 acid phosphatase%3B periplasmic;gbkey=CDS;gene=appA;product=phosphoanhydride phosphorylase;protein_id=NP_415500.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1041985 1042018 . + . ID=id144;Note=REP90 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1042030 1044210 . - . ID=gene996;Dbxref=EcoGene:EG11826,GeneID:947409;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;gene_synonym=ECK0972,JW0964,yccC;locus_tag=b0981 NC_000913.3 RefSeq CDS 1042030 1044210 . - 0 ID=cds961;Parent=gene996;Dbxref=ASAP:ABE-0003309,UniProtKB/Swiss-Prot:P38134,Genbank:NP_415501.1,EcoGene:EG11826,GeneID:947409;Name=NP_415501.1;gbkey=CDS;gene=etk;product=tyrosine-protein kinase%2C role in O-antigen capsule formation;protein_id=NP_415501.1;transl_table=11 NC_000913.3 RefSeq gene 1044230 1044676 . - . ID=gene997;Dbxref=EcoGene:EG13727,GeneID:945236;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=ECK0973,JW5132,yccY;locus_tag=b0982 NC_000913.3 RefSeq CDS 1044230 1044676 . - 0 ID=cds962;Parent=gene997;Dbxref=ASAP:ABE-0003312,UniProtKB/Swiss-Prot:P0ACZ2,Genbank:NP_415502.4,EcoGene:EG13727,GeneID:945236;Name=NP_415502.4;Note=putative phosphatase;gbkey=CDS;gene=etp;product=O-antigen capsule forming protein-tyrosine-phosphatase%3B Etk-P dephosphorylase;protein_id=NP_415502.4;transl_table=11 NC_000913.3 RefSeq gene 1044664 1045803 . - . ID=gene998;Dbxref=EcoGene:EG13728,GeneID:945586;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;gene_synonym=ECK0974,JW0966,yccZ;locus_tag=b0983 NC_000913.3 RefSeq CDS 1044664 1045803 . - 0 ID=cds963;Parent=gene998;Dbxref=ASAP:ABE-0003317,UniProtKB/Swiss-Prot:P0A932,Genbank:NP_415503.1,EcoGene:EG13728,GeneID:945586;Name=NP_415503.1;Note=putative function in exopolysaccharide production;gbkey=CDS;gene=gfcE;product=putative O-antigen capsule outer membrane auxillary protein export channel;protein_id=NP_415503.1;transl_table=11 NC_000913.3 RefSeq gene 1045849 1047945 . - . ID=gene999;Dbxref=EcoGene:EG13729,GeneID:945588;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;gene_synonym=ECK0975,JW0967,ymcA;locus_tag=b0984 NC_000913.3 RefSeq CDS 1045849 1047945 . - 0 ID=cds964;Parent=gene999;Dbxref=ASAP:ABE-0003319,UniProtKB/Swiss-Prot:P75882,Genbank:NP_415504.1,EcoGene:EG13729,GeneID:945588;Name=NP_415504.1;gbkey=CDS;gene=gfcD;product=putative O-antigen capsule production periplasmic protein;protein_id=NP_415504.1;transl_table=11 NC_000913.3 RefSeq gene 1047945 1048691 . - . ID=gene1000;Dbxref=EcoGene:EG13730,GeneID:944978;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;gene_synonym=ECK0976,JW0968,ymcB;locus_tag=b0985 NC_000913.3 RefSeq CDS 1047945 1048691 . - 0 ID=cds965;Parent=gene1000;Dbxref=ASAP:ABE-0003321,UniProtKB/Swiss-Prot:P75883,Genbank:NP_415505.1,EcoGene:EG13730,GeneID:944978;Name=NP_415505.1;gbkey=CDS;gene=gfcC;product=putative O-antigen capsule production periplasmic protein;protein_id=NP_415505.1;transl_table=11 NC_000913.3 RefSeq gene 1048688 1049332 . - . ID=gene1001;Dbxref=EcoGene:EG13731,GeneID:949118;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;gene_synonym=ECK0977,JW0969,ymcC;locus_tag=b0986 NC_000913.3 RefSeq CDS 1048688 1049332 . - 0 ID=cds966;Parent=gene1001;Dbxref=ASAP:ABE-0003323,UniProtKB/Swiss-Prot:P75884,Genbank:NP_415506.1,EcoGene:EG13731,GeneID:949118;Name=NP_415506.1;Note=putative regulator;gbkey=CDS;gene=gfcB;product=O-antigen capsule production lipoprotein;protein_id=NP_415506.1;transl_table=11 NC_000913.3 RefSeq gene 1049439 1049744 . - . ID=gene1002;Dbxref=EcoGene:EG13732,GeneID:945029;Name=gfcA;gbkey=Gene;gene=gfcA;gene_biotype=protein_coding;gene_synonym=ECK0978,JW5133,ymcD;locus_tag=b0987 NC_000913.3 RefSeq CDS 1049439 1049744 . - 0 ID=cds967;Parent=gene1002;Dbxref=ASAP:ABE-0003325,UniProtKB/Swiss-Prot:P75885,Genbank:NP_415507.2,EcoGene:EG13732,GeneID:945029;Name=NP_415507.2;gbkey=CDS;gene=gfcA;product=O-antigen capsule production threonine-rich inner membrane protein;protein_id=NP_415507.2;transl_table=11 NC_000913.3 RefSeq region 1049778 1050545 . + . ID=id145;gbkey=mobile_element NC_000913.3 RefSeq gene 1049833 1050108 . + . ID=gene1003;Dbxref=EcoGene:EG40001,GeneID:1450250;Name=insA;Note=insA4;gbkey=Gene;gene=insA;gene_biotype=protein_coding;gene_synonym=ECK4531;locus_tag=b4516 NC_000913.3 RefSeq CDS 1049833 1050108 . + 0 ID=cds968;Parent=gene1003;Dbxref=ASAP:ABE-0285037,UniProtKB/Swiss-Prot:P0CF10,Genbank:YP_588445.1,EcoGene:EG40001,GeneID:1450250;Name=YP_588445.1;gbkey=CDS;gene=insA;product=IS1 repressor TnpA;protein_id=YP_588445.1;transl_table=11 NC_000913.3 RefSeq gene 1050027 1050530 . + . ID=gene1004;Dbxref=EcoGene:EG40002,GeneID:945009;Name=insB1;gbkey=Gene;gene=insB1;gene_biotype=protein_coding;gene_synonym=ECK0022;locus_tag=b0988 NC_000913.3 RefSeq CDS 1050027 1050530 . + 0 ID=cds969;Parent=gene1004;Dbxref=ASAP:ABE-0003338,UniProtKB/Swiss-Prot:P57998,Genbank:NP_415508.1,EcoGene:EG40002,GeneID:945009;Name=NP_415508.1;gbkey=CDS;gene=insB1;product=IS1 transposase B;protein_id=NP_415508.1;transl_table=11 NC_000913.3 RefSeq gene 1050963 1051175 . - . ID=gene1005;Dbxref=EcoGene:EG14281,GeneID:945590;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;gene_synonym=cspK,ECK0979,JW5134;locus_tag=b0989 NC_000913.3 RefSeq CDS 1050963 1051175 . - 0 ID=cds970;Parent=gene1005;Dbxref=ASAP:ABE-0003341,UniProtKB/Swiss-Prot:P0A982,Genbank:NP_415509.1,EcoGene:EG14281,GeneID:945590;Name=NP_415509.1;Note=cold shock-like protein;gbkey=CDS;gene=cspH;product=stress protein%2C member of the CspA-family;protein_id=NP_415509.1;transl_table=11 NC_000913.3 RefSeq gene 1051461 1051673 . + . ID=gene1006;Dbxref=EcoGene:EG14243,GeneID:945591;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;gene_synonym=cspI,ECK0980,JW0974;locus_tag=b0990 NC_000913.3 RefSeq CDS 1051461 1051673 . + 0 ID=cds971;Parent=gene1006;Dbxref=ASAP:ABE-0003346,UniProtKB/Swiss-Prot:P0A978,Genbank:NP_415510.1,EcoGene:EG14243,GeneID:945591;Name=NP_415510.1;Note=homolog of Salmonella cold shock protein;gbkey=CDS;gene=cspG;product=cold shock protein homolog%2C cold-inducible;protein_id=NP_415510.1;transl_table=11 NC_000913.3 RefSeq gene 1051847 1052077 . + . ID=gene1007;Dbxref=EcoGene:EG13232,GeneID:946951;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;gene_synonym=ECK0981,JW0975,sfa;locus_tag=b0991 NC_000913.3 RefSeq CDS 1051847 1052077 . + 0 ID=cds972;Parent=gene1007;Dbxref=ASAP:ABE-0003349,UniProtKB/Swiss-Prot:P0AAA5,Genbank:NP_415511.1,EcoGene:EG13232,GeneID:946951;Name=NP_415511.1;Note=suppresses fabA and ts growth mutation;gbkey=CDS;gene=ymcE;product=cold shock gene;protein_id=NP_415511.1;transl_table=11 NC_000913.3 RefSeq gene 1052067 1052240 . + . ID=gene1008;Dbxref=EcoGene:EG13233,GeneID:1450249;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;gene_synonym=ECK0982,JW0976,sfa,yccL;locus_tag=b4517 NC_000913.3 RefSeq CDS 1052067 1052240 . + 0 ID=cds973;Parent=gene1008;Dbxref=ASAP:ABE-0285038,UniProtKB/Swiss-Prot:P0AC92,Genbank:YP_588446.1,EcoGene:EG13233,GeneID:1450249;Name=YP_588446.1;gbkey=CDS;gene=gnsA;product=putative phosphatidylethanolamine synthesis regulator;protein_id=YP_588446.1;transl_table=11 NC_000913.3 RefSeq gene 1052289 1053362 . - . ID=gene1009;Dbxref=EcoGene:EG13234,GeneID:946295;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;gene_synonym=ECK0983,JW0977;locus_tag=b0992 NC_000913.3 RefSeq CDS 1052289 1053362 . - 0 ID=cds974;Parent=gene1009;Dbxref=ASAP:ABE-0003351,UniProtKB/Swiss-Prot:P52636,Genbank:NP_415512.1,EcoGene:EG13234,GeneID:946295;Name=NP_415512.1;gbkey=CDS;gene=yccM;product=putative 4Fe-4S membrane protein;protein_id=NP_415512.1;transl_table=11 NC_000913.3 RefSeq gene 1053434 1056178 . - . ID=gene1010;Dbxref=EcoGene:EG12617,GeneID:945595;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;gene_synonym=ECK0984,JW5135,yccI;locus_tag=b0993 NC_000913.3 RefSeq CDS 1053434 1056178 . - 0 ID=cds975;Parent=gene1010;Dbxref=ASAP:ABE-0003354,UniProtKB/Swiss-Prot:P39453,Genbank:NP_415513.2,EcoGene:EG12617,GeneID:945595;Name=NP_415513.2;gbkey=CDS;gene=torS;product=hybrid sensory histidine kinase in two-component regulatory system with TorR;protein_id=NP_415513.2;transl_table=11 NC_000913.3 RefSeq gene 1056261 1057289 . + . ID=gene1011;Dbxref=EcoGene:EG12616,GeneID:946289;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;gene_synonym=ECK0985,JW0979,yccH;locus_tag=b0994 NC_000913.3 RefSeq CDS 1056261 1057289 . + 0 ID=cds976;Parent=gene1011;Dbxref=ASAP:ABE-0003360,UniProtKB/Swiss-Prot:P38683,Genbank:NP_415514.1,EcoGene:EG12616,GeneID:946289;Name=NP_415514.1;Note=part of regulation of tor operon%2C periplasmic;gbkey=CDS;gene=torT;product=periplasmic sensory protein associated with the TorRS two-component regulatory system;protein_id=NP_415514.1;transl_table=11 NC_000913.3 RefSeq gene 1057262 1057954 . - . ID=gene1012;Dbxref=EcoGene:EG12615,GeneID:946182;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;gene_synonym=ECK0986,JW0980;locus_tag=b0995 NC_000913.3 RefSeq CDS 1057262 1057954 . - 0 ID=cds977;Parent=gene1012;Dbxref=ASAP:ABE-0003362,UniProtKB/Swiss-Prot:P38684,Genbank:NP_415515.1,EcoGene:EG12615,GeneID:946182;Name=NP_415515.1;Note=response transcriptional regulator for torA (sensor TorS);gbkey=CDS;gene=torR;product=response regulator in two-component regulatory system with TorS;protein_id=NP_415515.1;transl_table=11 NC_000913.3 RefSeq gene 1058084 1059256 . + . ID=gene1013;Dbxref=EcoGene:EG11815,GeneID:946252;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;gene_synonym=ECK0987,JW0981;locus_tag=b0996 NC_000913.3 RefSeq CDS 1058084 1059256 . + 0 ID=cds978;Parent=gene1013;Dbxref=ASAP:ABE-0003370,UniProtKB/Swiss-Prot:P33226,Genbank:NP_415516.1,EcoGene:EG11815,GeneID:946252;Name=NP_415516.1;Note=trimethylamine N-oxide reductase%2C cytochrome c-type subunit;gbkey=CDS;gene=torC;product=trimethylamine N-oxide (TMAO) reductase I%2C cytochrome c-type subunit;protein_id=NP_415516.1;transl_table=11 NC_000913.3 RefSeq gene 1059256 1061802 . + . ID=gene1014;Dbxref=EcoGene:EG11814,GeneID:946267;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;gene_synonym=ECK0988,JW0982;locus_tag=b0997 NC_000913.3 RefSeq CDS 1059256 1061802 . + 0 ID=cds979;Parent=gene1014;Dbxref=ASAP:ABE-0003372,UniProtKB/Swiss-Prot:P33225,Genbank:NP_415517.1,EcoGene:EG11814,GeneID:946267;Name=NP_415517.1;Note=trimethylamine N-oxide reductase subunit;gbkey=CDS;gene=torA;product=trimethylamine N-oxide (TMAO) reductase I%2C catalytic subunit;protein_id=NP_415517.1;transl_table=11 NC_000913.3 RefSeq gene 1061799 1062398 . + . ID=gene1015;Dbxref=EcoGene:EG12195,GeneID:945625;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;gene_synonym=ECK0989,JW0983;locus_tag=b0998 NC_000913.3 RefSeq CDS 1061799 1062398 . + 0 ID=cds980;Parent=gene1015;Dbxref=ASAP:ABE-0003374,UniProtKB/Swiss-Prot:P36662,Genbank:NP_415518.1,EcoGene:EG12195,GeneID:945625;Name=NP_415518.1;Note=part of trimethylamine-N-oxide oxidoreductase;gbkey=CDS;gene=torD;product=TorA-maturation chaperone;protein_id=NP_415518.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1062407 1062540 . + . ID=id146;Note=REP91 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1062550 1062855 . - . ID=gene1016;Dbxref=EcoGene:EG12194,GeneID:945597;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;gene_synonym=ECK0990,JW0984,yccD;locus_tag=b0999 NC_000913.3 RefSeq CDS 1062550 1062855 . - 0 ID=cds981;Parent=gene1016;Dbxref=ASAP:ABE-0003377,UniProtKB/Swiss-Prot:P63264,Genbank:NP_415519.1,EcoGene:EG12194,GeneID:945597;Name=NP_415519.1;gbkey=CDS;gene=cbpM;product=modulator of CbpA co-chaperone;protein_id=NP_415519.1;transl_table=11 NC_000913.3 RefSeq gene 1062855 1063775 . - . ID=gene1017;Dbxref=EcoGene:EG12193,GeneID:947572;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;gene_synonym=ECK0991,JW0985;locus_tag=b1000 NC_000913.3 RefSeq CDS 1062855 1063775 . - 0 ID=cds982;Parent=gene1017;Dbxref=ASAP:ABE-0003379,UniProtKB/Swiss-Prot:P36659,Genbank:NP_415520.1,EcoGene:EG12193,GeneID:947572;Name=NP_415520.1;Note=curved DNA-binding protein%3B functions closely related to DnaJ;gbkey=CDS;gene=cbpA;product=DnaK co-chaperone%3B curved DNA-binding protein;protein_id=NP_415520.1;transl_table=11 NC_000913.3 RefSeq gene 1064036 1065292 . + . ID=gene1018;Dbxref=EcoGene:EG12196,GeneID:947468;Name=yccE;gbkey=Gene;gene=yccE;gene_biotype=protein_coding;gene_synonym=ECK0992,JW0986;locus_tag=b1001 NC_000913.3 RefSeq CDS 1064036 1065292 . + 0 ID=cds983;Parent=gene1018;Dbxref=ASAP:ABE-0003384,UniProtKB/Swiss-Prot:P36661,Genbank:NP_415521.1,EcoGene:EG12196,GeneID:947468;Name=NP_415521.1;gbkey=CDS;gene=yccE;product=uncharacterized protein;protein_id=NP_415521.1;transl_table=11 NC_000913.3 RefSeq gene 1065585 1066826 . + . ID=gene1019;Dbxref=EcoGene:EG10033,GeneID:945773;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;gene_synonym=ECK0993,JW0987;locus_tag=b1002 NC_000913.3 RefSeq CDS 1065585 1066826 . + 0 ID=cds984;Parent=gene1019;Dbxref=ASAP:ABE-0003388,UniProtKB/Swiss-Prot:P19926,Genbank:NP_415522.1,EcoGene:EG10033,GeneID:945773;Name=NP_415522.1;Note=periplasmic glucose-1-phosphatase;gbkey=CDS;gene=agp;product=glucose-1-phosphatase/inositol phosphatase;protein_id=NP_415522.1;transl_table=11 NC_000913.3 RefSeq gene 1066864 1067091 . - . ID=gene1020;Dbxref=EcoGene:EG12703,GeneID:948930;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;gene_synonym=ECK0994,JW0988;locus_tag=b1003 NC_000913.3 RefSeq CDS 1066864 1067091 . - 0 ID=cds985;Parent=gene1020;Dbxref=ASAP:ABE-0003390,UniProtKB/Swiss-Prot:P0AB14,Genbank:NP_415523.1,EcoGene:EG12703,GeneID:948930;Name=NP_415523.1;gbkey=CDS;gene=yccJ;product=uncharacterized protein;protein_id=NP_415523.1;transl_table=11 NC_000913.3 RefSeq gene 1067112 1067708 . - . ID=gene1021;Dbxref=EcoGene:EG11540,GeneID:947263;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;gene_synonym=ECK0995,JW0989;locus_tag=b1004 NC_000913.3 RefSeq CDS 1067112 1067708 . - 0 ID=cds986;Parent=gene1021;Dbxref=ASAP:ABE-0003392,UniProtKB/Swiss-Prot:P0A8G6,Genbank:NP_415524.1,EcoGene:EG11540,GeneID:947263;Name=NP_415524.1;Note=flavoprotein WrbA (Trp repressor binding protein);gbkey=CDS;gene=wrbA;product=NAD(P)H:quinone oxidoreductase;protein_id=NP_415524.1;transl_table=11 NC_000913.3 RefSeq gene 1068081 1068254 . + . ID=gene1022;Dbxref=EcoGene:EG14358,GeneID:945598;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;gene_synonym=ECK0996,JW5136;locus_tag=b4518 NC_000913.3 RefSeq CDS 1068081 1068254 . + 0 ID=cds987;Parent=gene1022;Dbxref=ASAP:ABE-0285039,UniProtKB/Swiss-Prot:P56614,Genbank:NP_415525.2,EcoGene:EG14358,GeneID:945598;Name=NP_415525.2;gbkey=CDS;gene=ymdF;product=KGG family protein;protein_id=NP_415525.2;transl_table=11 NC_000913.3 RefSeq repeat_region 1068354 1068451 . + . ID=id147;Note=RIP92 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1068511 1069839 . - . ID=gene1023;Dbxref=EcoGene:EG13853,GeneID:946589;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;gene_synonym=ECK0997,JW5137,ycdG;locus_tag=b1006 NC_000913.3 RefSeq CDS 1068511 1069839 . - 0 ID=cds988;Parent=gene1023;Dbxref=ASAP:ABE-0003401,UniProtKB/Swiss-Prot:P75892,Genbank:NP_415526.4,EcoGene:EG13853,GeneID:946589;Name=NP_415526.4;Note=putative transport protein;gbkey=CDS;gene=rutG;product=pyrimidine permease;protein_id=NP_415526.4;transl_table=11 NC_000913.3 RefSeq gene 1069860 1070354 . - . ID=gene1024;Dbxref=EcoGene:EG13854,GeneID:946594;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;gene_synonym=ECK0998,JW5138,ycdH;locus_tag=b1007 NC_000913.3 RefSeq CDS 1069860 1070354 . - 0 ID=cds989;Parent=gene1024;Dbxref=ASAP:ABE-0003403,UniProtKB/Swiss-Prot:P75893,Genbank:NP_415527.4,EcoGene:EG13854,GeneID:946594;Name=NP_415527.4;gbkey=CDS;gene=rutF;product=flavin:NADH reductase;protein_id=NP_415527.4;transl_table=11 NC_000913.3 RefSeq gene 1070365 1070955 . - . ID=gene1025;Dbxref=EcoGene:EG13855,GeneID:946591;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;gene_synonym=ECK0999,JW0993,ycdI;locus_tag=b1008 NC_000913.3 RefSeq CDS 1070365 1070955 . - 0 ID=cds990;Parent=gene1025;Dbxref=ASAP:ABE-0003407,UniProtKB/Swiss-Prot:P75894,Genbank:NP_415528.1,EcoGene:EG13855,GeneID:946591;Name=NP_415528.1;gbkey=CDS;gene=rutE;product=putative malonic semialdehyde reductase;protein_id=NP_415528.1;transl_table=11 NC_000913.3 RefSeq gene 1070965 1071765 . - . ID=gene1026;Dbxref=EcoGene:EG13856,GeneID:946586;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;gene_synonym=ECK1000,JW0994,ycdJ;locus_tag=b1009 NC_000913.3 RefSeq CDS 1070965 1071765 . - 0 ID=cds991;Parent=gene1026;Dbxref=ASAP:ABE-0003410,UniProtKB/Swiss-Prot:P75895,Genbank:NP_415529.1,EcoGene:EG13856,GeneID:946586;Name=NP_415529.1;gbkey=CDS;gene=rutD;product=putative reactive intermediate detoxifying aminoacrylate hydrolase;protein_id=NP_415529.1;transl_table=11 NC_000913.3 RefSeq gene 1071773 1072159 . - . ID=gene1027;Dbxref=EcoGene:EG13857,GeneID:945599;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;gene_synonym=ECK1001,JW0995,ycdK;locus_tag=b1010 NC_000913.3 RefSeq CDS 1071773 1072159 . - 0 ID=cds992;Parent=gene1027;Dbxref=ASAP:ABE-0003412,UniProtKB/Swiss-Prot:P0AFQ5,Genbank:NP_415530.1,EcoGene:EG13857,GeneID:945599;Name=NP_415530.1;gbkey=CDS;gene=rutC;product=putative aminoacrylate deaminase%2C reactive intermediate detoxification%3B weak enamine/imine deaminase activity;protein_id=NP_415530.1;transl_table=11 NC_000913.3 RefSeq gene 1072171 1072863 . - . ID=gene1028;Dbxref=EcoGene:EG13858,GeneID:945699;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;gene_synonym=ECK1002,JW5139,ycdL;locus_tag=b1011 NC_000913.3 RefSeq CDS 1072171 1072863 . - 0 ID=cds993;Parent=gene1028;Dbxref=ASAP:ABE-0003414,UniProtKB/Swiss-Prot:P75897,Genbank:NP_415531.2,EcoGene:EG13858,GeneID:945699;Name=NP_415531.2;gbkey=CDS;gene=rutB;product=ureidoacrylate amidohydrolase;protein_id=NP_415531.2;transl_table=11 NC_000913.3 RefSeq gene 1072863 1074011 . - . ID=gene1029;Dbxref=EcoGene:EG13859,GeneID:945643;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;gene_synonym=ECK1003,JW0997,ycdM;locus_tag=b1012 NC_000913.3 RefSeq CDS 1072863 1074011 . - 0 ID=cds994;Parent=gene1029;Dbxref=ASAP:ABE-0003416,UniProtKB/Swiss-Prot:P75898,Genbank:NP_415532.3,EcoGene:EG13859,GeneID:945643;Name=NP_415532.3;gbkey=CDS;gene=rutA;product=pyrimidine oxygenase%2C FMN-dependent;protein_id=NP_415532.3;transl_table=11 NC_000913.3 RefSeq gene 1074242 1074880 . + . ID=gene1030;Dbxref=EcoGene:EG12301,GeneID:945075;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;gene_synonym=ECK1004,JW0998,ycdC;locus_tag=b1013 NC_000913.3 RefSeq CDS 1074242 1074880 . + 0 ID=cds995;Parent=gene1030;Dbxref=ASAP:ABE-0003422,UniProtKB/Swiss-Prot:P0ACU2,Genbank:NP_415533.1,EcoGene:EG12301,GeneID:945075;Name=NP_415533.1;Note=hypothetical transcriptional regulator;gbkey=CDS;gene=rutR;product=rut operon transcriptional repressor for;protein_id=NP_415533.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1074885 1074912 . + . ID=id148;Note=REP93 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1074920 1078882 . - . ID=gene1031;Dbxref=EcoGene:EG10801,GeneID:945600;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;gene_synonym=ECK1005,JW0999,poaA,putC;locus_tag=b1014 NC_000913.3 RefSeq CDS 1074920 1078882 . - 0 ID=cds996;Parent=gene1031;Dbxref=ASAP:ABE-0003424,UniProtKB/Swiss-Prot:P09546,Genbank:NP_415534.1,EcoGene:EG10801,GeneID:945600;Name=NP_415534.1;Note=proline dehydrogenase%2C P5C dehydrogenase;gbkey=CDS;gene=putA;product=fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=NP_415534.1;transl_table=11 NC_000913.3 RefSeq gene 1079305 1080813 . + . ID=gene1032;Dbxref=EcoGene:EG10802,GeneID:945602;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;gene_synonym=ECK1006,JW1001,putC;locus_tag=b1015 NC_000913.3 RefSeq CDS 1079305 1080813 . + 0 ID=cds997;Parent=gene1032;Dbxref=ASAP:ABE-0003433,UniProtKB/Swiss-Prot:P07117,Genbank:NP_415535.1,EcoGene:EG10802,GeneID:945602;Name=NP_415535.1;Note=major sodium/proline symporter;gbkey=CDS;gene=putP;product=proline:sodium symporter;protein_id=NP_415535.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1081112 1081145 . + . ID=id149;Note=REP94 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1081356 1082185 . + . ID=gene1033;Dbxref=EcoGene:EG13860,GeneID:948956;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=pseudogene;gene_synonym=ECK1007,JW1002,JW5141,ycdN;locus_tag=b4490;pseudo=true NC_000913.3 RefSeq CDS 1081356 1081460 . + 0 ID=cds998;Parent=gene1033;Dbxref=ASAP:ABE-0003441,ASAP:ABE-0003443,ASAP:ABE-0285091,UniProtKB/Swiss-Prot:P75901,EcoGene:EG13860,GeneID:948956;Note=ferrous iron permease (pseudogene);gbkey=CDS;gene=efeU;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1081460 1082185 . + 0 ID=cds998;Parent=gene1033;Dbxref=ASAP:ABE-0003441,ASAP:ABE-0003443,ASAP:ABE-0285091,UniProtKB/Swiss-Prot:P75901,EcoGene:EG13860,GeneID:948956;Note=ferrous iron permease (pseudogene);gbkey=CDS;gene=efeU;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1082243 1083370 . + . ID=gene1034;Dbxref=EcoGene:EG13861,GeneID:945603;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;gene_synonym=ECK1008,JW1003,ycdO;locus_tag=b1018 NC_000913.3 RefSeq CDS 1082243 1083370 . + 0 ID=cds999;Parent=gene1034;Dbxref=ASAP:ABE-0003448,UniProtKB/Swiss-Prot:P0AB24,Genbank:NP_415537.1,EcoGene:EG13861,GeneID:945603;Name=NP_415537.1;gbkey=CDS;gene=efeO;product=inactive ferrous ion transporter EfeUOB;protein_id=NP_415537.1;transl_table=11 NC_000913.3 RefSeq gene 1083376 1084647 . + . ID=gene1035;Dbxref=EcoGene:EG11735,GeneID:946500;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;gene_synonym=ECK1009,JW1004,ycdB;locus_tag=b1019 NC_000913.3 RefSeq CDS 1083376 1084647 . + 0 ID=cds1000;Parent=gene1035;Dbxref=ASAP:ABE-0003451,UniProtKB/Swiss-Prot:P31545,Genbank:NP_415538.1,EcoGene:EG11735,GeneID:946500;Name=NP_415538.1;gbkey=CDS;gene=efeB;product=deferrrochelatase%2C periplasmic;protein_id=NP_415538.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1084682 1084767 . + . ID=id150;Note=REP95 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1084992 1086056 . + . ID=gene1036;Dbxref=EcoGene:EG11734,GeneID:948010;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;gene_synonym=ECK1010,JW1005,psiH;locus_tag=b1020 NC_000913.3 RefSeq CDS 1084992 1086056 . + 0 ID=cds1001;Parent=gene1036;Dbxref=ASAP:ABE-0003458,UniProtKB/Swiss-Prot:P0A9K1,Genbank:NP_415539.1,EcoGene:EG11734,GeneID:948010;Name=NP_415539.1;Note=PhoB-dependent%2C ATP-binding pho regulon component%3B may be helicase%3B induced by P starvation;gbkey=CDS;gene=phoH;product=ATP-binding protein%3B putative PhoH family P-loop ATPase;protein_id=NP_415539.1;transl_table=11 NC_000913.3 RefSeq gene 1086106 1086519 . - . ID=gene1037;Dbxref=EcoGene:EG13862,GeneID:947503;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;gene_synonym=ECK1011,hmsS,JW1006,ycdP;locus_tag=b1021 NC_000913.3 RefSeq CDS 1086106 1086519 . - 0 ID=cds1002;Parent=gene1037;Dbxref=ASAP:ABE-0003460,UniProtKB/Swiss-Prot:P69432,Genbank:NP_415540.1,EcoGene:EG13862,GeneID:947503;Name=NP_415540.1;gbkey=CDS;gene=pgaD;product=biofilm PGA synthase PgaCD%2C regulatory subunit%3B c-di-GMP-stimulated activity and dimerization;protein_id=NP_415540.1;transl_table=11 NC_000913.3 RefSeq gene 1086521 1087846 . - . ID=gene1038;Dbxref=EcoGene:EG13863,GeneID:945606;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;gene_synonym=ECK1012,hmsR,JW1007,ycdQ;locus_tag=b1022 NC_000913.3 RefSeq CDS 1086521 1087846 . - 0 ID=cds1003;Parent=gene1038;Dbxref=ASAP:ABE-0003464,UniProtKB/Swiss-Prot:P75905,Genbank:NP_415541.1,EcoGene:EG13863,GeneID:945606;Name=NP_415541.1;gbkey=CDS;gene=pgaC;product=biofilm PGA synthase PgaCD%2C catalytic subunit%3B poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=NP_415541.1;transl_table=11 NC_000913.3 RefSeq gene 1087839 1089857 . - . ID=gene1039;Dbxref=EcoGene:EG13864,GeneID:945604;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;gene_synonym=ECK1013,JW5142,ycdR;locus_tag=b1023 NC_000913.3 RefSeq CDS 1087839 1089857 . - 0 ID=cds1004;Parent=gene1039;Dbxref=ASAP:ABE-0003467,UniProtKB/Swiss-Prot:P75906,Genbank:NP_415542.1,EcoGene:EG13864,GeneID:945604;Name=NP_415542.1;gbkey=CDS;gene=pgaB;product=poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein;protein_id=NP_415542.1;transl_table=11 NC_000913.3 RefSeq gene 1089866 1092289 . - . ID=gene1040;Dbxref=EcoGene:EG13865,GeneID:945596;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;gene_synonym=ECK1014,JW1010,ycdS;locus_tag=b1024 NC_000913.3 RefSeq CDS 1089866 1092289 . - 0 ID=cds1005;Parent=gene1040;Dbxref=ASAP:ABE-0003469,UniProtKB/Swiss-Prot:P69434,Genbank:NP_415543.1,EcoGene:EG13865,GeneID:945596;Name=NP_415543.1;Note=putative outer membrane protein;gbkey=CDS;gene=pgaA;product=biofilm adhesin polysaccharide PGA secretin%3B OM porin%3B poly-beta-1%2C6-N-acetyl-D-glucosamine export protein;protein_id=NP_415543.1;transl_table=11 NC_000913.3 RefSeq gene 1092876 1094234 . + . ID=gene1041;Dbxref=EcoGene:EG13866,GeneID:945593;Name=ycdT;gbkey=Gene;gene=ycdT;gene_biotype=protein_coding;gene_synonym=ECK1015,JW5143;locus_tag=b1025 NC_000913.3 RefSeq CDS 1092876 1094234 . + 0 ID=cds1006;Parent=gene1041;Dbxref=ASAP:ABE-0003472,UniProtKB/Swiss-Prot:P75908,Genbank:NP_415544.1,EcoGene:EG13866,GeneID:945593;Name=NP_415544.1;gbkey=CDS;gene=ycdT;product=diguanylate cyclase%2C membrane-anchored;protein_id=NP_415544.1;transl_table=11 NC_000913.3 RefSeq region 1094245 1095502 . - . ID=id151;gbkey=mobile_element NC_000913.3 RefSeq gene 1094275 1095141 . - . ID=gene1042;Dbxref=EcoGene:EG40006,GeneID:945587;Name=insF1;gbkey=Gene;gene=insF1;gene_biotype=protein_coding;gene_synonym=ECK0299;locus_tag=b1026 NC_000913.3 RefSeq CDS 1094275 1095141 . - 0 ID=cds1007;Parent=gene1042;Dbxref=ASAP:ABE-0003475,UniProtKB/Swiss-Prot:P0CF82,Genbank:NP_415545.1,EcoGene:EG40006,GeneID:945587;Name=NP_415545.1;gbkey=CDS;gene=insF1;product=IS3 transposase B;protein_id=NP_415545.1;transl_table=11 NC_000913.3 RefSeq gene 1095138 1095437 . - . ID=gene1043;Dbxref=EcoGene:EG40005,GeneID:945584;Name=insE1;gbkey=Gene;gene=insE1;gene_biotype=protein_coding;gene_synonym=ECK0298;locus_tag=b1027 NC_000913.3 RefSeq CDS 1095138 1095437 . - 0 ID=cds1008;Parent=gene1043;Dbxref=ASAP:ABE-0003477,UniProtKB/Swiss-Prot:P0CF69,Genbank:NP_415546.2,EcoGene:EG40005,GeneID:945584;Name=NP_415546.2;gbkey=CDS;gene=insE1;product=IS3 transposase A;protein_id=NP_415546.2;transl_table=11 NC_000913.3 RefSeq gene 1095505 1095846 . + . ID=gene1044;Dbxref=EcoGene:EG14357,GeneID:945589;Name=ymdE;gbkey=Gene;gene=ymdE;gene_biotype=pseudogene;gene_synonym=ECK1016,JW5145;locus_tag=b1028;pseudo=true NC_000913.3 RefSeq CDS 1095505 1095846 . + 0 ID=cds1009;Parent=gene1044;Dbxref=ASAP:ABE-0003486,UniProtKB/Swiss-Prot:Q7DFV4,EcoGene:EG14357,GeneID:945589;Note=pseudogene;gbkey=CDS;gene=ymdE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1095843 1096829 . + . ID=gene1045;Dbxref=EcoGene:EG13867,GeneID:945592;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;gene_synonym=ECK1017,JW1015;locus_tag=b1029 NC_000913.3 RefSeq CDS 1095843 1096829 . + 0 ID=cds1010;Parent=gene1045;Dbxref=ASAP:ABE-0003489,UniProtKB/Swiss-Prot:P75910,Genbank:NP_415548.1,EcoGene:EG13867,GeneID:945592;Name=NP_415548.1;gbkey=CDS;gene=ycdU;product=putative inner membrane protein;protein_id=NP_415548.1;transl_table=11 NC_000913.3 RefSeq gene 1097565 1097652 . - . ID=gene1046;Dbxref=EcoGene:EG30097,GeneID:945714;Name=serX;gbkey=Gene;gene=serX;gene_biotype=tRNA;gene_synonym=ECK1018,JWR0027;locus_tag=b1032 NC_000913.3 RefSeq tRNA 1097565 1097652 . - . ID=rna35;Parent=gene1046;Dbxref=ASAP:ABE-0003498,EcoGene:EG30097,GeneID:945714;Note=anticodon: GGA;gbkey=tRNA;gene=serX;product=tRNA-Ser NC_000913.3 RefSeq exon 1097565 1097652 . - . ID=id152;Parent=rna35;Dbxref=ASAP:ABE-0003498,EcoGene:EG30097,GeneID:945714;Note=anticodon: GGA;gbkey=tRNA;gene=serX;product=tRNA-Ser NC_000913.3 RefSeq gene 1097886 1098824 . + . ID=gene1047;Dbxref=EcoGene:EG13869,GeneID:946431;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;gene_synonym=ECK1019,JW5146,ycdW;locus_tag=b1033 NC_000913.3 RefSeq CDS 1097886 1098824 . + 0 ID=cds1011;Parent=gene1047;Dbxref=ASAP:ABE-0003503,UniProtKB/Swiss-Prot:P75913,Genbank:NP_415551.2,EcoGene:EG13869,GeneID:946431;Name=NP_415551.2;Note=putative dehydrogenase;gbkey=CDS;gene=ghrA;product=glyoxylate/hydroxypyruvate reductase A;protein_id=NP_415551.2;transl_table=11 NC_000913.3 RefSeq gene 1098879 1099616 . + . ID=gene1048;Dbxref=EcoGene:EG13870,GeneID:948477;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;gene_synonym=ECK1020,JW1017;locus_tag=b1034 NC_000913.3 RefSeq CDS 1098879 1099616 . + 0 ID=cds1012;Parent=gene1048;Dbxref=ASAP:ABE-0003508,UniProtKB/Swiss-Prot:P75914,Genbank:NP_415552.1,EcoGene:EG13870,GeneID:948477;Name=NP_415552.1;gbkey=CDS;gene=ycdX;product=alkaline phosphatase;protein_id=NP_415552.1;transl_table=11 NC_000913.3 RefSeq gene 1099640 1100194 . + . ID=gene1049;Dbxref=EcoGene:EG13871,GeneID:945609;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;gene_synonym=ECK1021,JW1018;locus_tag=b1035 NC_000913.3 RefSeq CDS 1099640 1100194 . + 0 ID=cds1013;Parent=gene1049;Dbxref=ASAP:ABE-0003511,UniProtKB/Swiss-Prot:P75915,Genbank:NP_415553.1,EcoGene:EG13871,GeneID:945609;Name=NP_415553.1;Note=putative oxidoreductase component;gbkey=CDS;gene=ycdY;product=redox enzyme maturation protein (REMP) chaperone for YcdX;protein_id=NP_415553.1;transl_table=11 NC_000913.3 RefSeq gene 1100296 1100787 . + . ID=gene1050;Dbxref=EcoGene:EG13872,GeneID:945617;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;gene_synonym=ECK1022,JW5147,nupT;locus_tag=b1036 NC_000913.3 RefSeq CDS 1100296 1100787 . + 0 ID=cds1014;Parent=gene1050;Dbxref=ASAP:ABE-0003514,UniProtKB/Swiss-Prot:P75916,Genbank:NP_415554.4,EcoGene:EG13872,GeneID:945617;Name=NP_415554.4;gbkey=CDS;gene=ycdZ;product=DUF1097 family inner membrane protein;protein_id=NP_415554.4;transl_table=11 NC_000913.3 RefSeq repeat_region 1100821 1100839 . + . ID=id153;Note=REP96 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1100851 1101684 . - . ID=gene1051;Dbxref=EcoGene:EG13413,GeneID:945619;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;gene_synonym=agfG,ECK1023,JW1020;locus_tag=b1037 NC_000913.3 RefSeq CDS 1100851 1101684 . - 0 ID=cds1015;Parent=gene1051;Dbxref=ASAP:ABE-0003516,UniProtKB/Swiss-Prot:P0AEA2,Genbank:NP_415555.1,EcoGene:EG13413,GeneID:945619;Name=NP_415555.1;Note=curli production assembly/transport component%2C 2nd curli operon;gbkey=CDS;gene=csgG;product=curli production assembly/transport outer membrane lipoprotein;protein_id=NP_415555.1;transl_table=11 NC_000913.3 RefSeq gene 1101711 1102127 . - . ID=gene1052;Dbxref=EcoGene:EG13412,GeneID:945622;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;gene_synonym=agfF,ECK1024,JW1021;locus_tag=b1038 NC_000913.3 RefSeq CDS 1101711 1102127 . - 0 ID=cds1016;Parent=gene1052;Dbxref=ASAP:ABE-0003519,UniProtKB/Swiss-Prot:P0AE98,Genbank:NP_415556.1,EcoGene:EG13412,GeneID:945622;Name=NP_415556.1;Note=curli production assembly/transport component%2C 2nd curli operon;gbkey=CDS;gene=csgF;product=curli nucleation outer membrane protein;protein_id=NP_415556.1;transl_table=11 NC_000913.3 RefSeq gene 1102152 1102541 . - . ID=gene1053;Dbxref=EcoGene:EG13411,GeneID:945711;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;gene_synonym=agfE,ECK1025,JW1022;locus_tag=b1039 NC_000913.3 RefSeq CDS 1102152 1102541 . - 0 ID=cds1017;Parent=gene1053;Dbxref=ASAP:ABE-0003528,UniProtKB/Swiss-Prot:P0AE95,Genbank:NP_415557.1,EcoGene:EG13411,GeneID:945711;Name=NP_415557.1;Note=curli production assembly/transport component%2C 2nd curli operon;gbkey=CDS;gene=csgE;product=curlin secretion specificity factor;protein_id=NP_415557.1;transl_table=11 NC_000913.3 RefSeq gene 1102546 1103196 . - . ID=gene1054;Dbxref=EcoGene:EG13410,GeneID:949119;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;gene_synonym=agfD,ECK1026,JW1023;locus_tag=b1040 NC_000913.3 RefSeq CDS 1102546 1103196 . - 0 ID=cds1018;Parent=gene1054;Dbxref=ASAP:ABE-0003530,UniProtKB/Swiss-Prot:P52106,Genbank:NP_415558.1,EcoGene:EG13410,GeneID:949119;Name=NP_415558.1;Note=putative 2-component transcriptional regulator for 2nd curli operon;gbkey=CDS;gene=csgD;product=csgBAC operon transcriptional regulator;protein_id=NP_415558.1;transl_table=11 NC_000913.3 RefSeq gene 1103951 1104406 . + . ID=gene1055;Dbxref=EcoGene:EG12621,GeneID:947391;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;gene_synonym=agfB,ECK1027,JW1024;locus_tag=b1041 NC_000913.3 RefSeq CDS 1103951 1104406 . + 0 ID=cds1019;Parent=gene1055;Dbxref=ASAP:ABE-0003534,UniProtKB/Swiss-Prot:P0ABK7,Genbank:NP_415559.1,EcoGene:EG12621,GeneID:947391;Name=NP_415559.1;Note=minor curlin subunit precursor%2C similar ro CsgA;gbkey=CDS;gene=csgB;product=curlin nucleator protein%2C minor subunit in curli complex;protein_id=NP_415559.1;transl_table=11 NC_000913.3 RefSeq gene 1104447 1104902 . + . ID=gene1056;Dbxref=EcoGene:EG11489,GeneID:949055;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;gene_synonym=agfA,ECK1028,JW1025;locus_tag=b1042 NC_000913.3 RefSeq CDS 1104447 1104902 . + 0 ID=cds1020;Parent=gene1056;Dbxref=ASAP:ABE-0003537,UniProtKB/Swiss-Prot:P28307,Genbank:NP_415560.1,EcoGene:EG11489,GeneID:949055;Name=NP_415560.1;Note=curlin major subunit%2C coiled surface structures%3B cryptic;gbkey=CDS;gene=csgA;product=curlin subunit%2C amyloid curli fibers%2C cryptic;protein_id=NP_415560.1;transl_table=11 NC_000913.3 RefSeq gene 1104961 1105293 . + . ID=gene1057;Dbxref=EcoGene:EG13414,GeneID:945623;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;gene_synonym=agfC,ECK1029,JW1026,ycdE;locus_tag=b1043 NC_000913.3 RefSeq CDS 1104961 1105293 . + 0 ID=cds1021;Parent=gene1057;Dbxref=ASAP:ABE-0003542,UniProtKB/Swiss-Prot:P52107,Genbank:NP_415561.1,EcoGene:EG13414,GeneID:945623;Name=NP_415561.1;Note=putative curli production protein;gbkey=CDS;gene=csgC;product=curli assembly protein;protein_id=NP_415561.1;transl_table=11 NC_000913.3 RefSeq gene 1105414 1105725 . + . ID=gene1058;Dbxref=EcoGene:EG13873,GeneID:949012;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;gene_synonym=ECK1030,JW1031;locus_tag=b1044 NC_000913.3 RefSeq CDS 1105414 1105725 . + 0 ID=cds1022;Parent=gene1058;Dbxref=ASAP:ABE-0003545,UniProtKB/Swiss-Prot:P75917,Genbank:NP_415562.1,EcoGene:EG13873,GeneID:949012;Name=NP_415562.1;gbkey=CDS;gene=ymdA;product=uncharacterized protein;protein_id=NP_415562.1;transl_table=11 NC_000913.3 RefSeq gene 1105820 1106353 . + . ID=gene1059;Dbxref=EcoGene:EG13874,GeneID:946987;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;gene_synonym=ECK1031,JW1032;locus_tag=b1045 NC_000913.3 RefSeq CDS 1105820 1106353 . + 0 ID=cds1023;Parent=gene1059;Dbxref=ASAP:ABE-0003549,UniProtKB/Swiss-Prot:P0A8D6,Genbank:NP_415563.1,EcoGene:EG13874,GeneID:946987;Name=NP_415563.1;Note=putative polyprotein;gbkey=CDS;gene=ymdB;product=O-acetyl-ADP-ribose deacetylase%3B RNase III inhibitor during cold shock%3B putative cardiolipin synthase C regulatory subunit;protein_id=NP_415563.1;transl_table=11 NC_000913.3 RefSeq gene 1106355 1107776 . + . ID=gene1060;Dbxref=EcoGene:EG13875,GeneID:947321;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;gene_synonym=ECK1032,JW5150,ymdC;locus_tag=b1046 NC_000913.3 RefSeq CDS 1106355 1107776 . + 0 ID=cds1024;Parent=gene1060;Dbxref=ASAP:ABE-0003551,UniProtKB/Swiss-Prot:P75919,Genbank:NP_415564.2,EcoGene:EG13875,GeneID:947321;Name=NP_415564.2;Note=putative synthase;gbkey=CDS;gene=clsC;product=stationary phase cardiolipin synthase 3;protein_id=NP_415564.2;transl_table=11 NC_000913.3 RefSeq gene 1107784 1108941 . - . ID=gene1061;Dbxref=EcoGene:EG13876,GeneID:946944;Name=opgC;gbkey=Gene;gene=opgC;gene_biotype=protein_coding;gene_synonym=ECK1033,JW1034,mdoC,ymdD;locus_tag=b1047 NC_000913.3 RefSeq CDS 1107784 1108941 . - 0 ID=cds1025;Parent=gene1061;Dbxref=ASAP:ABE-0003553,UniProtKB/Swiss-Prot:P75920,Genbank:NP_415565.1,EcoGene:EG13876,GeneID:946944;Name=NP_415565.1;gbkey=CDS;gene=opgC;product=OPG biosynthetic transmembrane succinyltransferase;protein_id=NP_415565.1;transl_table=11 NC_000913.3 RefSeq gene 1109335 1110870 . + . ID=gene1062;Dbxref=EcoGene:EG11885,GeneID:945005;Name=opgG;gbkey=Gene;gene=opgG;gene_biotype=protein_coding;gene_synonym=ECK1034,JW1035,mdoA,mdoG;locus_tag=b1048 NC_000913.3 RefSeq CDS 1109335 1110870 . + 0 ID=cds1026;Parent=gene1062;Dbxref=ASAP:ABE-0003558,UniProtKB/Swiss-Prot:P33136,Genbank:NP_415566.1,EcoGene:EG11885,GeneID:945005;Name=NP_415566.1;Note=periplasmic glucans biosynthesis protein;gbkey=CDS;gene=opgG;product=OPG biosynthetic periplasmic beta-1%2C6 branching glycosyltransferase;protein_id=NP_415566.1;transl_table=11 NC_000913.3 RefSeq gene 1110863 1113406 . + . ID=gene1063;Dbxref=EcoGene:EG11886,GeneID:945624;Name=opgH;gbkey=Gene;gene=opgH;gene_biotype=protein_coding;gene_synonym=ECK1035,JW1037,mdoA,mdoH;locus_tag=b1049 NC_000913.3 RefSeq CDS 1110863 1113406 . + 0 ID=cds1027;Parent=gene1063;Dbxref=ASAP:ABE-0003560,UniProtKB/Swiss-Prot:P62517,Genbank:NP_415567.1,EcoGene:EG11886,GeneID:945624;Name=NP_415567.1;Note=membrane glycosyltransferase%3B synthesis of membrane-derived oligosaccharide (MDO);gbkey=CDS;gene=opgH;product=OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1%2C2 glycosyltransferase%3B nutrient-dependent cell size regulator%2C FtsZ assembly antagonist;protein_id=NP_415567.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1113417 1113514 . + . ID=id154;Note=RIP97 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1113579 1113806 . + . ID=gene1064;Dbxref=EcoGene:EG12689,GeneID:945613;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;gene_synonym=ECK1036,JW5151;locus_tag=b1050 NC_000913.3 RefSeq CDS 1113579 1113806 . + 0 ID=cds1028;Parent=gene1064;Dbxref=ASAP:ABE-0003565,UniProtKB/Swiss-Prot:P0AB31,Genbank:NP_415568.1,EcoGene:EG12689,GeneID:945613;Name=NP_415568.1;gbkey=CDS;gene=yceK;product=outer membrane integrity lipoprotein;protein_id=NP_415568.1;transl_table=11 NC_000913.3 RefSeq gene 1113807 1114181 . - . ID=gene1065;Dbxref=EcoGene:EG11338,GeneID:945612;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;gene_synonym=ECK1037,JW1039;locus_tag=b1051 NC_000913.3 RefSeq CDS 1113807 1114181 . - 0 ID=cds1029;Parent=gene1065;Dbxref=ASAP:ABE-0003567,UniProtKB/Swiss-Prot:P25738,Genbank:NP_415569.4,EcoGene:EG11338,GeneID:945612;Name=NP_415569.4;Note=acidic protein suppresses mutants lacking function of protein export;gbkey=CDS;gene=msyB;product=multicopy suppressor of secY and secA;protein_id=NP_415569.4;transl_table=11 NC_000913.3 RefSeq gene 1114264 1115490 . - . ID=gene1066;Dbxref=EcoGene:EG11343,GeneID:945627;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;gene_synonym=ECK1038,JW1040,yceE;locus_tag=b1053 NC_000913.3 RefSeq CDS 1114264 1115490 . - 0 ID=cds1030;Parent=gene1066;Dbxref=ASAP:ABE-0003572,UniProtKB/Swiss-Prot:P25744,Genbank:NP_415571.1,EcoGene:EG11343,GeneID:945627;Name=NP_415571.1;Note=putative transport protein;gbkey=CDS;gene=mdtG;product=putative drug efflux system protein;protein_id=NP_415571.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1115626 1115652 . + . ID=id155;Note=REP98 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1115662 1116582 . - . ID=gene1067;Dbxref=EcoGene:EG10464,GeneID:946216;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;gene_synonym=ECK1039,htrB,JW1041,waaM;locus_tag=b1054 NC_000913.3 RefSeq CDS 1115662 1116582 . - 0 ID=cds1031;Parent=gene1067;Dbxref=ASAP:ABE-0003574,UniProtKB/Swiss-Prot:P0ACV0,Genbank:NP_415572.1,EcoGene:EG10464,GeneID:946216;Name=NP_415572.1;Note=heat shock protein;gbkey=CDS;gene=lpxL;product=lauryl-acyl carrier protein (ACP)-dependent acyltransferase;protein_id=NP_415572.1;transl_table=11 NC_000913.3 RefSeq gene 1116807 1117859 . + . ID=gene1068;Dbxref=EcoGene:EG11116,GeneID:945601;Name=yceA;gbkey=Gene;gene=yceA;gene_biotype=protein_coding;gene_synonym=ECK1040,JW1042;locus_tag=b1055 NC_000913.3 RefSeq CDS 1116807 1117859 . + 0 ID=cds1032;Parent=gene1068;Dbxref=ASAP:ABE-0003581,UniProtKB/Swiss-Prot:P24188,Genbank:NP_415573.1,EcoGene:EG11116,GeneID:945601;Name=NP_415573.1;gbkey=CDS;gene=yceA;product=putative rhodanese-related sulfurtransferase;protein_id=NP_415573.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1117868 1117888 . + . ID=id156;Note=REP99 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1117901 1118476 . - . ID=gene1069;Dbxref=EcoGene:EG11820,GeneID:946145;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;gene_synonym=ECK1041,JW1043;locus_tag=b1056 NC_000913.3 RefSeq CDS 1117901 1118476 . - 0 ID=cds1033;Parent=gene1069;Dbxref=ASAP:ABE-0003583,UniProtKB/Swiss-Prot:P0A8X2,Genbank:NP_415574.1,EcoGene:EG11820,GeneID:946145;Name=NP_415574.1;gbkey=CDS;gene=yceI;product=periplasmic high pH-inducible lipid-binding protein;protein_id=NP_415574.1;transl_table=11 NC_000913.3 RefSeq gene 1118480 1119046 . - . ID=gene1070;Dbxref=EcoGene:EG12659,GeneID:945628;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=protein_coding;gene_synonym=ECK1042,JW1044;locus_tag=b1057 NC_000913.3 RefSeq CDS 1118480 1119046 . - 0 ID=cds1034;Parent=gene1070;Dbxref=ASAP:ABE-0003585,UniProtKB/Swiss-Prot:P75925,Genbank:NP_415575.1,EcoGene:EG12659,GeneID:945628;Name=NP_415575.1;gbkey=CDS;gene=yceJ;product=putative cytochrome b561;protein_id=NP_415575.1;transl_table=11 NC_000913.3 RefSeq gene 1119307 1119447 . - . ID=gene1071;Dbxref=EcoGene:EG14334,GeneID:945629;Name=yceO;gbkey=Gene;gene=yceO;gene_biotype=protein_coding;gene_synonym=ECK1043,JW1045;locus_tag=b1058 NC_000913.3 RefSeq CDS 1119307 1119447 . - 0 ID=cds1035;Parent=gene1071;Dbxref=ASAP:ABE-0003588,UniProtKB/Swiss-Prot:P64442,Genbank:NP_415576.1,EcoGene:EG14334,GeneID:945629;Name=NP_415576.1;gbkey=CDS;gene=yceO;product=uncharacterized protein;protein_id=NP_415576.1;transl_table=11 NC_000913.3 RefSeq gene 1119468 1120586 . - . ID=gene1072;Dbxref=EcoGene:EG12669,GeneID:944983;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;gene_synonym=ECK1044,JW1046;locus_tag=b1059 NC_000913.3 RefSeq CDS 1119468 1120586 . - 0 ID=cds1036;Parent=gene1072;Dbxref=ASAP:ABE-0003590,UniProtKB/Swiss-Prot:P40874,Genbank:NP_415577.1,EcoGene:EG12669,GeneID:944983;Name=NP_415577.1;Note=sarcosine oxidase-like protein;gbkey=CDS;gene=solA;product=N-methyltryptophan oxidase%2C FAD-binding;protein_id=NP_415577.1;transl_table=11 NC_000913.3 RefSeq gene 1120701 1120955 . - . ID=gene1073;Dbxref=EcoGene:EG14335,GeneID:946104;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=ECK1045,JW5152,yceP;locus_tag=b1060 NC_000913.3 RefSeq CDS 1120701 1120955 . - 0 ID=cds1037;Parent=gene1073;Dbxref=ASAP:ABE-0003594,UniProtKB/Swiss-Prot:P0AB33,Genbank:NP_415578.3,EcoGene:EG14335,GeneID:946104;Name=NP_415578.3;gbkey=CDS;gene=bssS;product=biofilm regulator;protein_id=NP_415578.3;transl_table=11 NC_000913.3 RefSeq gene 1121242 1121487 . - . ID=gene1074;Dbxref=EcoGene:EG12670,GeneID:945022;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;gene_synonym=ECK1046,JW1048;locus_tag=b1061 NC_000913.3 RefSeq CDS 1121242 1121487 . - 0 ID=cds1038;Parent=gene1074;Dbxref=ASAP:ABE-0003599,UniProtKB/Swiss-Prot:P0ABR1,Genbank:NP_415579.1,EcoGene:EG12670,GeneID:945022;Name=NP_415579.1;Note=damage-inducible protein I;gbkey=CDS;gene=dinI;product=DNA damage-inducible protein I;protein_id=NP_415579.1;transl_table=11 NC_000913.3 RefSeq gene 1121561 1122607 . - . ID=gene1075;Dbxref=EcoGene:EG10806,GeneID:945787;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;gene_synonym=ECK1047,JW1049;locus_tag=b1062 NC_000913.3 RefSeq CDS 1121561 1122607 . - 0 ID=cds1039;Parent=gene1075;Dbxref=ASAP:ABE-0003607,UniProtKB/Swiss-Prot:P05020,Genbank:NP_415580.1,EcoGene:EG10806,GeneID:945787;Name=NP_415580.1;gbkey=CDS;gene=pyrC;product=dihydro-orotase;protein_id=NP_415580.1;transl_table=11 NC_000913.3 RefSeq gene 1122713 1123273 . - . ID=gene1076;Dbxref=EcoGene:EG11117,GeneID:947377;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;gene_synonym=ECK1048,JW1050;locus_tag=b1063 NC_000913.3 RefSeq CDS 1122713 1123273 . - 0 ID=cds1040;Parent=gene1076;Dbxref=ASAP:ABE-0003611,UniProtKB/Swiss-Prot:P0AB26,Genbank:NP_415581.1,EcoGene:EG11117,GeneID:947377;Name=NP_415581.1;gbkey=CDS;gene=yceB;product=lipoprotein%2C DUF1439 family;protein_id=NP_415581.1;transl_table=11 NC_000913.3 RefSeq gene 1123407 1124054 . - . ID=gene1077;Dbxref=EcoGene:EG12688,GeneID:946926;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;gene_synonym=ECK1049,JW1051;locus_tag=b1064 NC_000913.3 RefSeq CDS 1123407 1124054 . - 0 ID=cds1041;Parent=gene1077;Dbxref=ASAP:ABE-0003615,UniProtKB/Swiss-Prot:P0AC59,Genbank:NP_415582.1,EcoGene:EG12688,GeneID:946926;Name=NP_415582.1;Note=glutaredoxin 2;gbkey=CDS;gene=grxB;product=glutaredoxin 2 (Grx2);protein_id=NP_415582.1;transl_table=11 NC_000913.3 RefSeq gene 1124118 1125326 . - . ID=gene1078;Dbxref=EcoGene:EG13878,GeneID:946920;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;gene_synonym=ECK1050,JW1052,yceL;locus_tag=b1065 NC_000913.3 RefSeq CDS 1124118 1125326 . - 0 ID=cds1042;Parent=gene1078;Dbxref=ASAP:ABE-0003618,UniProtKB/Swiss-Prot:P69367,Genbank:NP_415583.4,EcoGene:EG13878,GeneID:946920;Name=NP_415583.4;gbkey=CDS;gene=mdtH;product=multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin;protein_id=NP_415583.4;transl_table=11 NC_000913.3 RefSeq gene 1125562 1126146 . + . ID=gene1079;Dbxref=EcoGene:EG10851,GeneID:946910;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;gene_synonym=ECK1051,JW1053,tcp;locus_tag=b1066 NC_000913.3 RefSeq CDS 1125562 1126146 . + 0 ID=cds1043;Parent=gene1079;Dbxref=ASAP:ABE-0003622,UniProtKB/Swiss-Prot:P0A948,Genbank:NP_415584.1,EcoGene:EG10851,GeneID:946910;Name=NP_415584.1;Note=acetylation of N-terminal alanine of 30S ribosomal subunit protein S5;gbkey=CDS;gene=rimJ;product=ribosomal-protein-S5-alanine N-acetyltransferase;protein_id=NP_415584.1;transl_table=11 NC_000913.3 RefSeq gene 1126157 1126804 . + . ID=gene1080;Dbxref=EcoGene:EG11537,GeneID:945633;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;gene_synonym=ECK1052,JW1054;locus_tag=b1067 NC_000913.3 RefSeq CDS 1126157 1126804 . + 0 ID=cds1044;Parent=gene1080;Dbxref=ASAP:ABE-0003625,UniProtKB/Swiss-Prot:P29217,Genbank:NP_415585.1,EcoGene:EG11537,GeneID:945633;Name=NP_415585.1;gbkey=CDS;gene=yceH;product=UPF0502 family protein;protein_id=NP_415585.1;transl_table=11 NC_000913.3 RefSeq gene 1126806 1127729 . + . ID=gene1081;Dbxref=EcoGene:EG13879,GeneID:945204;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;gene_synonym=ECK1053,JW1055,mviM,mviS;locus_tag=b1068 NC_000913.3 RefSeq CDS 1126806 1127729 . + 0 ID=cds1045;Parent=gene1081;Dbxref=ASAP:ABE-0003627,UniProtKB/Swiss-Prot:P75931,Genbank:NP_415586.1,EcoGene:EG13879,GeneID:945204;Name=NP_415586.1;Note=putative virulence factor;gbkey=CDS;gene=yceM;product=putative oxidoreductase;protein_id=NP_415586.1;transl_table=11 NC_000913.3 RefSeq gene 1127839 1129374 . + . ID=gene1082;Dbxref=EcoGene:EG13880,GeneID:945487;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;gene_synonym=ECK1054,JW1056,mviN,mviS,yceN;locus_tag=b1069 NC_000913.3 RefSeq CDS 1127839 1129374 . + 0 ID=cds1046;Parent=gene1082;Dbxref=ASAP:ABE-0003630,UniProtKB/Swiss-Prot:P0AF16,Genbank:NP_415587.1,EcoGene:EG13880,GeneID:945487;Name=NP_415587.1;Note=putative virulence factor;gbkey=CDS;gene=murJ;product=putative lipid II flippase;protein_id=NP_415587.1;transl_table=11 NC_000913.3 RefSeq gene 1129414 1129830 . - . ID=gene1083;Dbxref=EcoGene:EG12665,GeneID:945634;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;gene_synonym=ECK1055,JW1057;locus_tag=b1070 NC_000913.3 RefSeq CDS 1129414 1129830 . - 0 ID=cds1047;Parent=gene1083;Dbxref=ASAP:ABE-0003632,UniProtKB/Swiss-Prot:P43533,Genbank:NP_415588.1,EcoGene:EG12665,GeneID:945634;Name=NP_415588.1;Note=protein of flagellar biosynthesis;gbkey=CDS;gene=flgN;product=export chaperone for FlgK and FlgL;protein_id=NP_415588.1;transl_table=11 NC_000913.3 RefSeq gene 1129835 1130128 . - . ID=gene1084;Dbxref=EcoGene:EG12664,GeneID:946684;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;gene_synonym=ECK1056,JW1058,mviS;locus_tag=b1071 NC_000913.3 RefSeq CDS 1129835 1130128 . - 0 ID=cds1048;Parent=gene1084;Dbxref=ASAP:ABE-0003634,UniProtKB/Swiss-Prot:P0AEM4,Genbank:NP_415589.1,EcoGene:EG12664,GeneID:946684;Name=NP_415589.1;Note=anti-FliA (anti-sigma) factor%3B also known as RflB protein;gbkey=CDS;gene=flgM;product=anti-sigma factor for FliA (sigma 28);protein_id=NP_415589.1;transl_table=11 NC_000913.3 RefSeq gene 1130204 1130863 . - . ID=gene1085;Dbxref=EcoGene:EG20263,GeneID:946300;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;gene_synonym=ECK1057,flaU,JW1059;locus_tag=b1072 NC_000913.3 RefSeq CDS 1130204 1130863 . - 0 ID=cds1049;Parent=gene1085;Dbxref=ASAP:ABE-0003637,UniProtKB/Swiss-Prot:P75933,Genbank:NP_415590.1,EcoGene:EG20263,GeneID:946300;Name=NP_415590.1;Note=flagellar biosynthesis%3B assembly of basal-body periplasmic P ring;gbkey=CDS;gene=flgA;product=assembly protein for flagellar basal-body periplasmic P ring;protein_id=NP_415590.1;transl_table=11 NC_000913.3 RefSeq gene 1131018 1131434 . + . ID=gene1086;Dbxref=EcoGene:EG14266,GeneID:945678;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;gene_synonym=ECK1058,flbA,JW1060;locus_tag=b1073 NC_000913.3 RefSeq CDS 1131018 1131434 . + 0 ID=cds1050;Parent=gene1086;Dbxref=ASAP:ABE-0003641,UniProtKB/Swiss-Prot:P0ABW9,Genbank:NP_415591.1,EcoGene:EG14266,GeneID:945678;Name=NP_415591.1;Note=flagellar biosynthesis%2C cell-proximal portion of basal-body rod;gbkey=CDS;gene=flgB;product=flagellar component of cell-proximal portion of basal-body rod;protein_id=NP_415591.1;transl_table=11 NC_000913.3 RefSeq gene 1131438 1131842 . + . ID=gene1087;Dbxref=EcoGene:EG14267,GeneID:946687;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;gene_synonym=ECK1059,flaW,JW1061;locus_tag=b1074 NC_000913.3 RefSeq CDS 1131438 1131842 . + 0 ID=cds1051;Parent=gene1087;Dbxref=ASAP:ABE-0003643,UniProtKB/Swiss-Prot:P0ABX2,Genbank:NP_415592.1,EcoGene:EG14267,GeneID:946687;Name=NP_415592.1;Note=flagellar biosynthesis%2C cell-proximal portion of basal-body rod;gbkey=CDS;gene=flgC;product=flagellar component of cell-proximal portion of basal-body rod;protein_id=NP_415592.1;transl_table=11 NC_000913.3 RefSeq gene 1131854 1132549 . + . ID=gene1088;Dbxref=EcoGene:EG14268,GeneID:945813;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;gene_synonym=ECK1060,flaV,JW1062;locus_tag=b1075 NC_000913.3 RefSeq CDS 1131854 1132549 . + 0 ID=cds1052;Parent=gene1088;Dbxref=ASAP:ABE-0003645,UniProtKB/Swiss-Prot:P75936,Genbank:NP_415593.1,EcoGene:EG14268,GeneID:945813;Name=NP_415593.1;Note=flagellar biosynthesis%2C initiation of hook assembly;gbkey=CDS;gene=flgD;product=flagellar hook assembly protein;protein_id=NP_415593.1;transl_table=11 NC_000913.3 RefSeq gene 1132574 1133782 . + . ID=gene1089;Dbxref=EcoGene:EG14269,GeneID:945636;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;gene_synonym=ECK1061,flaK,JW1063;locus_tag=b1076 NC_000913.3 RefSeq CDS 1132574 1133782 . + 0 ID=cds1053;Parent=gene1089;Dbxref=ASAP:ABE-0003647,UniProtKB/Swiss-Prot:P75937,Genbank:NP_415594.1,EcoGene:EG14269,GeneID:945636;Name=NP_415594.1;Note=flagellar biosynthesis%2C hook protein;gbkey=CDS;gene=flgE;product=flagellar hook protein;protein_id=NP_415594.1;transl_table=11 NC_000913.3 RefSeq gene 1133802 1134557 . + . ID=gene1090;Dbxref=EcoGene:EG14270,GeneID:945639;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;gene_synonym=ECK1062,flaX,JW1064;locus_tag=b1077 NC_000913.3 RefSeq CDS 1133802 1134557 . + 0 ID=cds1054;Parent=gene1090;Dbxref=ASAP:ABE-0003649,UniProtKB/Swiss-Prot:P75938,Genbank:NP_415595.1,EcoGene:EG14270,GeneID:945639;Name=NP_415595.1;Note=flagellar biosynthesis%2C cell-proximal portion of basal-body rod;gbkey=CDS;gene=flgF;product=flagellar component of cell-proximal portion of basal-body rod;protein_id=NP_415595.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1134586 1134683 . + . ID=id157;Note=RIP100 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1134729 1135511 . + . ID=gene1091;Dbxref=EcoGene:EG14271,GeneID:945647;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;gene_synonym=ECK1063,flaL,JW1065;locus_tag=b1078 NC_000913.3 RefSeq CDS 1134729 1135511 . + 0 ID=cds1055;Parent=gene1091;Dbxref=ASAP:ABE-0003652,UniProtKB/Swiss-Prot:P0ABX5,Genbank:NP_415596.1,EcoGene:EG14271,GeneID:945647;Name=NP_415596.1;Note=flagellar biosynthesis%2C cell-distal portion of basal-body rod;gbkey=CDS;gene=flgG;product=flagellar component of cell-distal portion of basal-body rod;protein_id=NP_415596.1;transl_table=11 NC_000913.3 RefSeq gene 1135564 1136262 . + . ID=gene1092;Dbxref=EcoGene:EG20264,GeneID:946996;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;gene_synonym=ECK1064,flaY,JW5153;locus_tag=b1079 NC_000913.3 RefSeq CDS 1135564 1136262 . + 0 ID=cds1056;Parent=gene1092;Dbxref=ASAP:ABE-0003654,UniProtKB/Swiss-Prot:P0A6S0,Genbank:NP_415597.1,EcoGene:EG20264,GeneID:946996;Name=NP_415597.1;Note=flagellar biosynthesis%2C basal-body outer-membrane L (lipopolysaccharide layer) ring protein;gbkey=CDS;gene=flgH;product=flagellar protein of basal-body outer-membrane L ring;protein_id=NP_415597.1;transl_table=11 NC_000913.3 RefSeq gene 1136274 1137371 . + . ID=gene1093;Dbxref=EcoGene:EG20265,GeneID:947534;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;gene_synonym=ECK1065,flaM,JW1067;locus_tag=b1080 NC_000913.3 RefSeq CDS 1136274 1137371 . + 0 ID=cds1057;Parent=gene1093;Dbxref=ASAP:ABE-0003656,UniProtKB/Swiss-Prot:P0A6S3,Genbank:NP_415598.3,EcoGene:EG20265,GeneID:947534;Name=NP_415598.3;Note=homolog of Salmonella P-ring of flagella basal body;gbkey=CDS;gene=flgI;product=putative flagellar basal body protein;protein_id=NP_415598.3;transl_table=11 NC_000913.3 RefSeq gene 1137371 1138312 . + . ID=gene1094;Dbxref=EcoGene:EG14272,GeneID:947456;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;gene_synonym=ECK1066,flaZ,JW1068;locus_tag=b1081 NC_000913.3 RefSeq CDS 1137371 1138312 . + 0 ID=cds1058;Parent=gene1094;Dbxref=ASAP:ABE-0003658,UniProtKB/Swiss-Prot:P75942,Genbank:NP_415599.1,EcoGene:EG14272,GeneID:947456;Name=NP_415599.1;Note=flagellar biosynthesis;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein and murein hydrolase%3B flagellum-specific muramidase;protein_id=NP_415599.1;transl_table=11 NC_000913.3 RefSeq gene 1138378 1140021 . + . ID=gene1095;Dbxref=EcoGene:EG11967,GeneID:945648;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;gene_synonym=ECK1067,flaS,JW1069;locus_tag=b1082 NC_000913.3 RefSeq CDS 1138378 1140021 . + 0 ID=cds1059;Parent=gene1095;Dbxref=ASAP:ABE-0003660,UniProtKB/Swiss-Prot:P33235,Genbank:NP_415600.1,EcoGene:EG11967,GeneID:945648;Name=NP_415600.1;Note=flagellar biosynthesis%2C hook-filament junction protein 1;gbkey=CDS;gene=flgK;product=flagellar hook-filament junction protein 1;protein_id=NP_415600.1;transl_table=11 NC_000913.3 RefSeq gene 1140033 1140986 . + . ID=gene1096;Dbxref=EcoGene:EG11545,GeneID:945646;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;gene_synonym=ECK1068,flaT,JW1070;locus_tag=b1083 NC_000913.3 RefSeq CDS 1140033 1140986 . + 0 ID=cds1060;Parent=gene1096;Dbxref=ASAP:ABE-0003666,UniProtKB/Swiss-Prot:P29744,Genbank:NP_415601.1,EcoGene:EG11545,GeneID:945646;Name=NP_415601.1;Note=flagellar biosynthesis%3B hook-filament junction protein;gbkey=CDS;gene=flgL;product=flagellar hook-filament junction protein;protein_id=NP_415601.1;transl_table=11 NC_000913.3 RefSeq gene 1141182 1144367 . - . ID=gene1097;Dbxref=EcoGene:EG10859,GeneID:945641;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;gene_synonym=ams,ECK1069,hmp1,JW1071,smbB;locus_tag=b1084 NC_000913.3 RefSeq CDS 1141182 1144367 . - 0 ID=cds1061;Parent=gene1097;Dbxref=ASAP:ABE-0003668,UniProtKB/Swiss-Prot:P21513,Genbank:NP_415602.1,EcoGene:EG10859,GeneID:945641;Name=NP_415602.1;Note=RNase E%2C membrane attachment%2C mRNA turnover%2C maturation 5S RNA;gbkey=CDS;gene=rne;product=endoribonuclease%3B RNA-binding protein%3BRNA degradosome binding protein;protein_id=NP_415602.1;transl_table=11 NC_000913.3 RefSeq gene 1144502 1144822 . + . ID=gene1098;Dbxref=EcoGene:EG14413,GeneID:945640;Name=yceQ;gbkey=Gene;gene=yceQ;gene_biotype=protein_coding;gene_synonym=ECK1070,JW5154;locus_tag=b1085 NC_000913.3 RefSeq CDS 1144502 1144822 . + 0 ID=cds1062;Parent=gene1098;Dbxref=ASAP:ABE-0003672,UniProtKB/Swiss-Prot:P62066,Genbank:NP_415603.2,EcoGene:EG14413,GeneID:945640;Name=NP_415603.2;gbkey=CDS;gene=yceQ;product=uncharacterized protein;protein_id=NP_415603.2;transl_table=11 NC_000913.3 RefSeq gene 1144940 1145899 . + . ID=gene1099;Dbxref=EcoGene:EG11118,GeneID:945637;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;gene_synonym=ECK1071,JW1072,yceC;locus_tag=b1086 NC_000913.3 RefSeq CDS 1144940 1145899 . + 0 ID=cds1063;Parent=gene1099;Dbxref=ASAP:ABE-0003675,UniProtKB/Swiss-Prot:P0AA39,Genbank:NP_415604.1,EcoGene:EG11118,GeneID:945637;Name=NP_415604.1;gbkey=CDS;gene=rluC;product=23S rRNA pseudouridine(955%2C2504%2C2580) synthase;protein_id=NP_415604.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1145928 1146002 . + . ID=id158;Note=REP101 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1146011 1146595 . - . ID=gene1100;Dbxref=EcoGene:EG11438,GeneID:945631;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;gene_synonym=ECK1072,JW5155;locus_tag=b1087 NC_000913.3 RefSeq CDS 1146011 1146595 . - 0 ID=cds1064;Parent=gene1100;Dbxref=ASAP:ABE-0003678,UniProtKB/Swiss-Prot:P0A729,Genbank:NP_415605.2,EcoGene:EG11438,GeneID:945631;Name=NP_415605.2;gbkey=CDS;gene=yceF;product=m(7)GTP pyrophosphatase;protein_id=NP_415605.2;transl_table=11 NC_000913.3 RefSeq gene 1146589 1146757 . + . ID=gene1101;Dbxref=EcoGene:EG31138,GeneID:2847755;Name=psrD;gbkey=Gene;gene=psrD;gene_biotype=ncRNA;gene_synonym=ECK1073,JWR0228,pke20,psrA4,sraB;locus_tag=b4418 NC_000913.3 RefSeq ncRNA 1146589 1146757 . + . ID=rna36;Parent=gene1101;Dbxref=ASAP:ABE-0047242,EcoGene:EG31138,GeneID:2847755;Note=identified in a large scale screen;gbkey=ncRNA;gene=psrD;ncrna_class=other;product=novel Novel sRNA%2C function unknown NC_000913.3 RefSeq exon 1146589 1146757 . + . ID=id159;Parent=rna36;Dbxref=ASAP:ABE-0047242,EcoGene:EG31138,GeneID:2847755;Note=identified in a large scale screen;gbkey=ncRNA;gene=psrD;ncrna_class=other;product=novel Novel sRNA%2C function unknown NC_000913.3 RefSeq gene 1146794 1147315 . + . ID=gene1102;Dbxref=EcoGene:EG11119,GeneID:945650;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;gene_synonym=ECK1074,JW1074;locus_tag=b1088 NC_000913.3 RefSeq CDS 1146794 1147315 . + 0 ID=cds1065;Parent=gene1102;Dbxref=ASAP:ABE-0003684,UniProtKB/Swiss-Prot:P0AB28,Genbank:NP_415606.1,EcoGene:EG11119,GeneID:945650;Name=NP_415606.1;gbkey=CDS;gene=yceD;product=DUF177 family protein;protein_id=NP_415606.1;transl_table=11 NC_000913.3 RefSeq gene 1147367 1147540 . + . ID=gene1103;Dbxref=EcoGene:EG10890,GeneID:945657;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;gene_synonym=ECK1075,JW1075;locus_tag=b1089 NC_000913.3 RefSeq CDS 1147367 1147540 . + 0 ID=cds1066;Parent=gene1103;Dbxref=ASAP:ABE-0003686,UniProtKB/Swiss-Prot:P0A7N4,Genbank:NP_415607.1,EcoGene:EG10890,GeneID:945657;Name=NP_415607.1;gbkey=CDS;gene=rpmF;product=50S ribosomal subunit protein L32;protein_id=NP_415607.1;transl_table=11 NC_000913.3 RefSeq gene 1147621 1148691 . + . ID=gene1104;Dbxref=EcoGene:EG11437,GeneID:946165;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;gene_synonym=ECK1076,JW5156;locus_tag=b1090 NC_000913.3 RefSeq CDS 1147621 1148691 . + 0 ID=cds1067;Parent=gene1104;Dbxref=ASAP:ABE-0003692,UniProtKB/Swiss-Prot:P27247,Genbank:NP_415608.2,EcoGene:EG11437,GeneID:946165;Name=NP_415608.2;Note=glycerolphosphate auxotrophy in plsB background;gbkey=CDS;gene=plsX;product=putative phosphate acyltransferase;protein_id=NP_415608.2;transl_table=11 NC_000913.3 RefSeq gene 1148759 1149712 . + . ID=gene1105;Dbxref=EcoGene:EG10277,GeneID:946003;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;gene_synonym=ECK1077,JW1077;locus_tag=b1091 NC_000913.3 RefSeq CDS 1148759 1149712 . + 0 ID=cds1068;Parent=gene1105;Dbxref=ASAP:ABE-0003696,UniProtKB/Swiss-Prot:P0A6R0,Genbank:NP_415609.1,EcoGene:EG10277,GeneID:946003;Name=NP_415609.1;Note=3-oxoacyl-[acyl-carrier-protein] synthase III%3B acetylCoA ACP transacylase;gbkey=CDS;gene=fabH;product=3-oxoacyl-[acyl-carrier-protein] synthase III;protein_id=NP_415609.1;transl_table=11 NC_000913.3 RefSeq gene 1149728 1150657 . + . ID=gene1106;Dbxref=EcoGene:EG11317,GeneID:945766;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;gene_synonym=ECK1078,JW1078,tfpA;locus_tag=b1092 NC_000913.3 RefSeq CDS 1149728 1150657 . + 0 ID=cds1069;Parent=gene1106;Dbxref=ASAP:ABE-0003698,UniProtKB/Swiss-Prot:P0AAI9,Genbank:NP_415610.1,EcoGene:EG11317,GeneID:945766;Name=NP_415610.1;gbkey=CDS;gene=fabD;product=malonyl-CoA-[acyl-carrier-protein] transacylase;protein_id=NP_415610.1;transl_table=11 NC_000913.3 RefSeq gene 1150670 1151404 . + . ID=gene1107;Dbxref=EcoGene:EG11318,GeneID:945645;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;gene_synonym=ECK1079,JW1079;locus_tag=b1093 NC_000913.3 RefSeq CDS 1150670 1151404 . + 0 ID=cds1070;Parent=gene1107;Dbxref=ASAP:ABE-0003700,UniProtKB/Swiss-Prot:P0AEK2,Genbank:NP_415611.1,EcoGene:EG11318,GeneID:945645;Name=NP_415611.1;gbkey=CDS;gene=fabG;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=NP_415611.1;transl_table=11 NC_000913.3 RefSeq gene 1151615 1151851 . + . ID=gene1108;Dbxref=EcoGene:EG50003,GeneID:944805;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;gene_synonym=ECK1080,JW1080;locus_tag=b1094 NC_000913.3 RefSeq CDS 1151615 1151851 . + 0 ID=cds1071;Parent=gene1108;Dbxref=ASAP:ABE-0003703,UniProtKB/Swiss-Prot:P0A6A8,Genbank:NP_415612.1,EcoGene:EG50003,GeneID:944805;Name=NP_415612.1;Note=acyl carrier protein;gbkey=CDS;gene=acpP;product=acyl carrier protein (ACP);protein_id=NP_415612.1;transl_table=11 NC_000913.3 RefSeq gene 1151939 1153180 . + . ID=gene1109;Dbxref=EcoGene:EG12606,GeneID:946665;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;gene_synonym=cvc,ECK1081,fabJ,JW1081,vtr;locus_tag=b1095 NC_000913.3 RefSeq CDS 1151939 1153180 . + 0 ID=cds1072;Parent=gene1109;Dbxref=ASAP:ABE-0003705,UniProtKB/Swiss-Prot:P0AAI5,Genbank:NP_415613.1,EcoGene:EG12606,GeneID:946665;Name=NP_415613.1;gbkey=CDS;gene=fabF;product=3-oxoacyl-[acyl-carrier-protein] synthase II;protein_id=NP_415613.1;transl_table=11 NC_000913.3 RefSeq gene 1153300 1154109 . + . ID=gene1110;Dbxref=EcoGene:EG11493,GeneID:946647;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;gene_synonym=ECK1082,JW1082;locus_tag=b1096 NC_000913.3 RefSeq CDS 1153300 1154109 . + 0 ID=cds1073;Parent=gene1110;Dbxref=ASAP:ABE-0003709,UniProtKB/Swiss-Prot:P28305,Genbank:NP_415614.1,EcoGene:EG11493,GeneID:946647;Name=NP_415614.1;Note=4-amino-4-deoxychorismate lyase;gbkey=CDS;gene=pabC;product=4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex;protein_id=NP_415614.1;transl_table=11 NC_000913.3 RefSeq gene 1154112 1155134 . + . ID=gene1111;Dbxref=EcoGene:EG11494,GeneID:945660;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;gene_synonym=ECK1083,JW1083;locus_tag=b1097 NC_000913.3 RefSeq CDS 1154112 1155134 . + 0 ID=cds1074;Parent=gene1111;Dbxref=ASAP:ABE-0003712,UniProtKB/Swiss-Prot:P28306,Genbank:NP_415615.1,EcoGene:EG11494,GeneID:945660;Name=NP_415615.1;Note=putative thymidylate kinase;gbkey=CDS;gene=yceG;product=septation protein%2C ampicillin sensitivity;protein_id=NP_415615.1;transl_table=11 NC_000913.3 RefSeq gene 1155124 1155765 . + . ID=gene1112;Dbxref=EcoGene:EG12302,GeneID:945663;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;gene_synonym=ECK1084,JW1084,ycfG;locus_tag=b1098 NC_000913.3 RefSeq CDS 1155124 1155765 . + 0 ID=cds1075;Parent=gene1112;Dbxref=ASAP:ABE-0003714,UniProtKB/Swiss-Prot:P0A720,Genbank:NP_415616.1,EcoGene:EG12302,GeneID:945663;Name=NP_415616.1;gbkey=CDS;gene=tmk;product=thymidylate kinase;protein_id=NP_415616.1;transl_table=11 NC_000913.3 RefSeq gene 1155762 1156766 . + . ID=gene1113;Dbxref=EcoGene:EG11500,GeneID:945661;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;gene_synonym=ECK1085,JW1085;locus_tag=b1099 NC_000913.3 RefSeq CDS 1155762 1156766 . + 0 ID=cds1076;Parent=gene1113;Dbxref=ASAP:ABE-0003716,UniProtKB/Swiss-Prot:P28631,Genbank:NP_415617.1,EcoGene:EG11500,GeneID:945661;Name=NP_415617.1;gbkey=CDS;gene=holB;product=DNA polymerase III%2C delta prime subunit;protein_id=NP_415617.1;transl_table=11 NC_000913.3 RefSeq gene 1156777 1157574 . + . ID=gene1114;Dbxref=EcoGene:EG12303,GeneID:945656;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;gene_synonym=ECK1086,JW1086;locus_tag=b1100 NC_000913.3 RefSeq CDS 1156777 1157574 . + 0 ID=cds1077;Parent=gene1114;Dbxref=ASAP:ABE-0003719,UniProtKB/Swiss-Prot:P0AFQ7,Genbank:NP_415618.1,EcoGene:EG12303,GeneID:945656;Name=NP_415618.1;gbkey=CDS;gene=ycfH;product=putative DNase;protein_id=NP_415618.1;transl_table=11 NC_000913.3 RefSeq gene 1157869 1159302 . + . ID=gene1115;Dbxref=EcoGene:EG10787,GeneID:945651;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;gene_synonym=car,cat,CR,ECK1087,glcA,JW1087,tgl,umg,umgC;locus_tag=b1101 NC_000913.3 RefSeq CDS 1157869 1159302 . + 0 ID=cds1078;Parent=gene1115;Dbxref=ASAP:ABE-0003722,UniProtKB/Swiss-Prot:P69786,Genbank:NP_415619.1,EcoGene:EG10787,GeneID:945651;Name=NP_415619.1;Note=PTS system%2C glucose-specific IIBC component;gbkey=CDS;gene=ptsG;product=fused glucose-specific PTS enzymes: IIB component/IIC component;protein_id=NP_415619.1;transl_table=11 NC_000913.3 RefSeq gene 1159362 1161551 . - . ID=gene1116;Dbxref=EcoGene:EG10306,GeneID:945649;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;gene_synonym=ECK1088,JW1088;locus_tag=b1102 NC_000913.3 RefSeq CDS 1159362 1161551 . - 0 ID=cds1079;Parent=gene1116;Dbxref=ASAP:ABE-0003724,UniProtKB/Swiss-Prot:P16869,Genbank:NP_415620.1,EcoGene:EG10306,GeneID:945649;Name=NP_415620.1;Note=outer membrane receptor for ferric iron uptake;gbkey=CDS;gene=fhuE;product=ferric-rhodotorulic acid outer membrane transporter;protein_id=NP_415620.1;transl_table=11 NC_000913.3 RefSeq gene 1161885 1162244 . + . ID=gene1117;Dbxref=EcoGene:EG12172,GeneID:948549;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;gene_synonym=ECK1089,JW1089,ycfF;locus_tag=b1103 NC_000913.3 RefSeq CDS 1161885 1162244 . + 0 ID=cds1080;Parent=gene1117;Dbxref=ASAP:ABE-0003729,UniProtKB/Swiss-Prot:P0ACE7,Genbank:NP_415621.3,EcoGene:EG12172,GeneID:948549;Name=NP_415621.3;gbkey=CDS;gene=hinT;product=purine nucleoside phosphoramidase%2C dadA activator protein;protein_id=NP_415621.3;transl_table=11 NC_000913.3 RefSeq gene 1162247 1162624 . + . ID=gene1118;Dbxref=EcoGene:EG13430,GeneID:948539;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;gene_synonym=ECK1090,JW1090;locus_tag=b1104 NC_000913.3 RefSeq CDS 1162247 1162624 . + 0 ID=cds1081;Parent=gene1118;Dbxref=ASAP:ABE-0003731,UniProtKB/Swiss-Prot:P75946,Genbank:NP_415622.1,EcoGene:EG13430,GeneID:948539;Name=NP_415622.1;gbkey=CDS;gene=ycfL;product=uncharacterized protein;protein_id=NP_415622.1;transl_table=11 NC_000913.3 RefSeq gene 1162638 1163279 . + . ID=gene1119;Dbxref=EcoGene:EG13431,GeneID:948536;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;gene_synonym=ECK1091,JW5157,ycfM;locus_tag=b1105 NC_000913.3 RefSeq CDS 1162638 1163279 . + 0 ID=cds1082;Parent=gene1119;Dbxref=ASAP:ABE-0003733,UniProtKB/Swiss-Prot:P0AB38,Genbank:NP_415623.1,EcoGene:EG13431,GeneID:948536;Name=NP_415623.1;gbkey=CDS;gene=lpoB;product=OM lipoprotein stimulator of MrcB transpeptidase;protein_id=NP_415623.1;transl_table=11 NC_000913.3 RefSeq gene 1163260 1164084 . + . ID=gene1120;Dbxref=EcoGene:EG13432,GeneID:948525;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;gene_synonym=ECK1092,JW1092,ycfN;locus_tag=b1106 NC_000913.3 RefSeq CDS 1163260 1164084 . + 0 ID=cds1083;Parent=gene1120;Dbxref=ASAP:ABE-0003735,UniProtKB/Swiss-Prot:P75948,Genbank:NP_415624.1,EcoGene:EG13432,GeneID:948525;Name=NP_415624.1;Note=putative beta-glucosidase;gbkey=CDS;gene=thiK;product=thiamine kinase;protein_id=NP_415624.1;transl_table=11 NC_000913.3 RefSeq gene 1164095 1165120 . + . ID=gene1121;Dbxref=EcoGene:EG13433,GeneID:945671;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;gene_synonym=ECK1093,JW1093,ycfO;locus_tag=b1107 NC_000913.3 RefSeq CDS 1164095 1165120 . + 0 ID=cds1084;Parent=gene1121;Dbxref=ASAP:ABE-0003737,UniProtKB/Swiss-Prot:P75949,Genbank:NP_415625.1,EcoGene:EG13433,GeneID:945671;Name=NP_415625.1;gbkey=CDS;gene=nagZ;product=beta N-acetyl-glucosaminidase;protein_id=NP_415625.1;transl_table=11 NC_000913.3 RefSeq gene 1165143 1165685 . + . ID=gene1122;Dbxref=EcoGene:EG13434,GeneID:945676;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;gene_synonym=ECK1094,JW5158;locus_tag=b1108 NC_000913.3 RefSeq CDS 1165143 1165685 . + 0 ID=cds1085;Parent=gene1122;Dbxref=ASAP:ABE-0003740,UniProtKB/Swiss-Prot:P0A8E1,Genbank:NP_415626.4,EcoGene:EG13434,GeneID:945676;Name=NP_415626.4;gbkey=CDS;gene=ycfP;product=putative UPF0227 family esterase;protein_id=NP_415626.4;transl_table=11 NC_000913.3 RefSeq repeat_region 1165739 1165813 . + . ID=id160;Note=REP102 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1166085 1167389 . + . ID=gene1123;Dbxref=EcoGene:EG10649,GeneID:946792;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;gene_synonym=ECK1095,JW1095;locus_tag=b1109 NC_000913.3 RefSeq CDS 1166085 1167389 . + 0 ID=cds1086;Parent=gene1123;Dbxref=ASAP:ABE-0003746,UniProtKB/Swiss-Prot:P00393,Genbank:NP_415627.1,EcoGene:EG10649,GeneID:946792;Name=NP_415627.1;Note=respiratory NADH dehydrogenase;gbkey=CDS;gene=ndh;product=respiratory NADH dehydrogenase 2/cupric reductase;protein_id=NP_415627.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1167402 1167431 . + . ID=id161;Note=REP103 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1167599 1168138 . + . ID=gene1124;Dbxref=EcoGene:EG12444,GeneID:945977;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;gene_synonym=ECK1096,JW1096;locus_tag=b1110 NC_000913.3 RefSeq CDS 1167599 1168138 . + 0 ID=cds1087;Parent=gene1124;Dbxref=ASAP:ABE-0003752,UniProtKB/Swiss-Prot:P0AB35,Genbank:NP_415628.1,EcoGene:EG12444,GeneID:945977;Name=NP_415628.1;gbkey=CDS;gene=ycfJ;product=uncharacterized protein;protein_id=NP_415628.1;transl_table=11 NC_000913.3 RefSeq gene 1168200 1168832 . - . ID=gene1125;Dbxref=EcoGene:EG13435,GeneID:947425;Name=ycfQ;gbkey=Gene;gene=ycfQ;gene_biotype=protein_coding;gene_synonym=ECK1097,JW5159;locus_tag=b1111 NC_000913.3 RefSeq CDS 1168200 1168832 . - 0 ID=cds1088;Parent=gene1125;Dbxref=ASAP:ABE-0003754,UniProtKB/Swiss-Prot:P75952,Genbank:NP_415629.4,EcoGene:EG13435,GeneID:947425;Name=NP_415629.4;gbkey=CDS;gene=ycfQ;product=repressor for bhsA(ycfR);protein_id=NP_415629.4;transl_table=11 NC_000913.3 RefSeq gene 1169073 1169330 . + . ID=gene1126;Dbxref=EcoGene:EG13436,GeneID:945492;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ECK1098,JW1098,ycfR;locus_tag=b1112 NC_000913.3 RefSeq CDS 1169073 1169330 . + 0 ID=cds1089;Parent=gene1126;Dbxref=ASAP:ABE-0003758,UniProtKB/Swiss-Prot:P0AB40,Genbank:NP_415630.1,EcoGene:EG13436,GeneID:945492;Name=NP_415630.1;gbkey=CDS;gene=bhsA;product=biofilm%2C cell surface and signaling protein;protein_id=NP_415630.1;transl_table=11 NC_000913.3 RefSeq gene 1169412 1170374 . - . ID=gene1127;Dbxref=EcoGene:EG13437,GeneID:945666;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;gene_synonym=ECK1099,JW5820,ycfS;locus_tag=b1113 NC_000913.3 RefSeq CDS 1169412 1170374 . - 0 ID=cds1090;Parent=gene1127;Dbxref=ASAP:ABE-0003760,UniProtKB/Swiss-Prot:P75954,Genbank:NP_415631.1,EcoGene:EG13437,GeneID:945666;Name=NP_415631.1;gbkey=CDS;gene=ldtC;product=L%2CD-transpeptidase linking Lpp to murein;protein_id=NP_415631.1;transl_table=11 NC_000913.3 RefSeq gene 1170518 1173964 . - . ID=gene1128;Dbxref=EcoGene:EG11619,GeneID:945681;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;gene_synonym=ECK1100,JW1100;locus_tag=b1114 NC_000913.3 RefSeq CDS 1170518 1173964 . - 0 ID=cds1091;Parent=gene1128;Dbxref=ASAP:ABE-0003763,UniProtKB/Swiss-Prot:P30958,Genbank:NP_415632.1,EcoGene:EG11619,GeneID:945681;Name=NP_415632.1;Note=transcription-repair coupling factor%3B mutation frequency decline;gbkey=CDS;gene=mfd;product=transcription-repair coupling factor;protein_id=NP_415632.1;transl_table=11 NC_000913.3 RefSeq gene 1174092 1175165 . - . ID=gene1129;Dbxref=EcoGene:EG13438,GeneID:945679;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;gene_synonym=ECK1101,JW1101;locus_tag=b1115 NC_000913.3 RefSeq CDS 1174092 1175165 . - 0 ID=cds1092;Parent=gene1129;Dbxref=ASAP:ABE-0003767,UniProtKB/Swiss-Prot:P75955,Genbank:NP_415633.1,EcoGene:EG13438,GeneID:945679;Name=NP_415633.1;gbkey=CDS;gene=ycfT;product=inner membrane protein;protein_id=NP_415633.1;transl_table=11 NC_000913.3 RefSeq gene 1175427 1176626 . + . ID=gene1130;Dbxref=EcoGene:EG13439,GeneID:945673;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;gene_synonym=ECK1102,JW5161,ycfU;locus_tag=b1116 NC_000913.3 RefSeq CDS 1175427 1176626 . + 0 ID=cds1093;Parent=gene1130;Dbxref=ASAP:ABE-0003772,UniProtKB/Swiss-Prot:P0ADC3,Genbank:NP_415634.1,EcoGene:EG13439,GeneID:945673;Name=NP_415634.1;Note=membrane component of ABC superfamily;gbkey=CDS;gene=lolC;product=lipoprotein-releasing system transmembrane protein;protein_id=NP_415634.1;transl_table=11 NC_000913.3 RefSeq gene 1176619 1177320 . + . ID=gene1131;Dbxref=EcoGene:EG13440,GeneID:945670;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;gene_synonym=ECK1103,JW5162,ycfV;locus_tag=b1117 NC_000913.3 RefSeq CDS 1176619 1177320 . + 0 ID=cds1094;Parent=gene1131;Dbxref=ASAP:ABE-0003774,UniProtKB/Swiss-Prot:P75957,Genbank:NP_415635.4,EcoGene:EG13440,GeneID:945670;Name=NP_415635.4;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=lolD;product=outer membrane-specific lipoprotein transporter subunit;protein_id=NP_415635.4;transl_table=11 NC_000913.3 RefSeq gene 1177320 1178564 . + . ID=gene1132;Dbxref=EcoGene:EG13441,GeneID:945665;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;gene_synonym=ECK1104,JW1104,ycfW;locus_tag=b1118 NC_000913.3 RefSeq CDS 1177320 1178564 . + 0 ID=cds1095;Parent=gene1132;Dbxref=ASAP:ABE-0003776,UniProtKB/Swiss-Prot:P75958,Genbank:NP_415636.1,EcoGene:EG13441,GeneID:945665;Name=NP_415636.1;Note=putative kinase%3B membrane component of ABC superfamily;gbkey=CDS;gene=lolE;product=lipoprotein-releasing system transmembrane protein;protein_id=NP_415636.1;transl_table=11 NC_000913.3 RefSeq gene 1178593 1179504 . + . ID=gene1133;Dbxref=EcoGene:EG13442,GeneID:945664;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;gene_synonym=ECK1105,JW1105,ycfX;locus_tag=b1119 NC_000913.3 RefSeq CDS 1178593 1179504 . + 0 ID=cds1096;Parent=gene1133;Dbxref=ASAP:ABE-0003778,UniProtKB/Swiss-Prot:P75959,Genbank:NP_415637.1,EcoGene:EG13442,GeneID:945664;Name=NP_415637.1;gbkey=CDS;gene=nagK;product=N-acetyl-D-glucosamine kinase;protein_id=NP_415637.1;transl_table=11 NC_000913.3 RefSeq gene 1179631 1180359 . + . ID=gene1134;Dbxref=EcoGene:EG13443,GeneID:945687;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;gene_synonym=ECK1106,JW1106,npdA,ycfY;locus_tag=b1120 NC_000913.3 RefSeq CDS 1179631 1180359 . + 0 ID=cds1097;Parent=gene1134;Dbxref=ASAP:ABE-0003781,UniProtKB/Swiss-Prot:P75960,Genbank:NP_415638.2,EcoGene:EG13443,GeneID:945687;Name=NP_415638.2;Note=putative nicotinic acid mononucleotide:5%2C6-dimethylbenzimidazole (DMB) phosphoribosyltransferase;gbkey=CDS;gene=cobB;product=deacetylase of acs and cheY%2C chemotaxis regulator;protein_id=NP_415638.2;transl_table=11 NC_000913.3 RefSeq repeat_region 1180354 1180449 . + . ID=id162;Note=RIP104 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region;gene=cobB NC_000913.3 RefSeq gene 1180479 1181267 . - . ID=gene1135;Dbxref=EcoGene:EG13444,GeneID:945685;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;gene_synonym=ECK1107,JW1107;locus_tag=b1121 NC_000913.3 RefSeq CDS 1180479 1181267 . - 0 ID=cds1098;Parent=gene1135;Dbxref=ASAP:ABE-0003784,UniProtKB/Swiss-Prot:P75961,Genbank:NP_415639.1,EcoGene:EG13444,GeneID:945685;Name=NP_415639.1;gbkey=CDS;gene=ycfZ;product=inner membrane protein;protein_id=NP_415639.1;transl_table=11 NC_000913.3 RefSeq gene 1181264 1181725 . - . ID=gene1136;Dbxref=EcoGene:EG13445,GeneID:945684;Name=ymfA;gbkey=Gene;gene=ymfA;gene_biotype=protein_coding;gene_synonym=ECK1108,JW5164;locus_tag=b1122 NC_000913.3 RefSeq CDS 1181264 1181725 . - 0 ID=cds1099;Parent=gene1136;Dbxref=ASAP:ABE-0003786,UniProtKB/Swiss-Prot:P75962,Genbank:NP_415640.2,EcoGene:EG13445,GeneID:945684;Name=NP_415640.2;gbkey=CDS;gene=ymfA;product=DUF3592 family inner membrane protein;protein_id=NP_415640.2;transl_table=11 NC_000913.3 RefSeq gene 1181783 1182829 . - . ID=gene1137;Dbxref=EcoGene:EG10752,GeneID:945682;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;gene_synonym=ECK1109,JW1109;locus_tag=b1123 NC_000913.3 RefSeq CDS 1181783 1182829 . - 0 ID=cds1100;Parent=gene1137;Dbxref=ASAP:ABE-0003789,UniProtKB/Swiss-Prot:P0AFK9,Genbank:NP_415641.1,EcoGene:EG10752,GeneID:945682;Name=NP_415641.1;Note=spermidine/putrescine periplasmic transport protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=potD;product=spermidine/putrescine ABC transporter periplasmic binding protein;protein_id=NP_415641.1;transl_table=11 NC_000913.3 RefSeq gene 1182826 1183620 . - . ID=gene1138;Dbxref=EcoGene:EG10751,GeneID:945691;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;gene_synonym=ECK1110,JW1110;locus_tag=b1124 NC_000913.3 RefSeq CDS 1182826 1183620 . - 0 ID=cds1101;Parent=gene1138;Dbxref=ASAP:ABE-0003791,UniProtKB/Swiss-Prot:P0AFK6,Genbank:NP_415642.1,EcoGene:EG10751,GeneID:945691;Name=NP_415642.1;Note=spermidine/putrescine transport system permease%3B membrane component of ABC superfamily;gbkey=CDS;gene=potC;product=spermidine/putrescine ABC transporter permease;protein_id=NP_415642.1;transl_table=11 NC_000913.3 RefSeq gene 1183617 1184444 . - . ID=gene1139;Dbxref=EcoGene:EG10750,GeneID:945692;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;gene_synonym=ECK1111,JW1111;locus_tag=b1125 NC_000913.3 RefSeq CDS 1183617 1184444 . - 0 ID=cds1102;Parent=gene1139;Dbxref=ASAP:ABE-0003794,UniProtKB/Swiss-Prot:P0AFK4,Genbank:NP_415643.3,EcoGene:EG10750,GeneID:945692;Name=NP_415643.3;Note=spermidine/putrescine transport system permease%3B membrane component of ABC superfamily;gbkey=CDS;gene=potB;product=spermidine/putrescine ABC transporter permease;protein_id=NP_415643.3;transl_table=11 NC_000913.3 RefSeq gene 1184458 1185594 . - . ID=gene1140;Dbxref=EcoGene:EG10749,GeneID:946323;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;gene_synonym=ECK1112,JW1112;locus_tag=b1126 NC_000913.3 RefSeq CDS 1184458 1185594 . - 0 ID=cds1103;Parent=gene1140;Dbxref=ASAP:ABE-0003796,UniProtKB/Swiss-Prot:P69874,Genbank:NP_415644.1,EcoGene:EG10749,GeneID:946323;Name=NP_415644.1;Note=ATP-binding component of spermidine/putrescine transport;gbkey=CDS;gene=potA;product=spermidine/putrescine ABC transporter ATPase;protein_id=NP_415644.1;transl_table=11 NC_000913.3 RefSeq gene 1185844 1187070 . + . ID=gene1141;Dbxref=EcoGene:EG11549,GeneID:946333;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;gene_synonym=ECK1113,JW1113;locus_tag=b1127 NC_000913.3 RefSeq CDS 1185844 1187070 . + 0 ID=cds1104;Parent=gene1141;Dbxref=ASAP:ABE-0003800,UniProtKB/Swiss-Prot:P29745,Genbank:NP_415645.1,EcoGene:EG11549,GeneID:946333;Name=NP_415645.1;Note=putative peptidase T;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=NP_415645.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1187083 1187106 . + . ID=id163;Note=REP105 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1187119 1188240 . - . ID=gene1142;Dbxref=EcoGene:EG11430,GeneID:945391;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ECK1114,JW1114,ycfD;locus_tag=b1128 NC_000913.3 RefSeq CDS 1187119 1188240 . - 0 ID=cds1105;Parent=gene1142;Dbxref=ASAP:ABE-0003802,UniProtKB/Swiss-Prot:P27431,Genbank:NP_415646.4,EcoGene:EG11430,GeneID:945391;Name=NP_415646.4;gbkey=CDS;gene=roxA;product=50S ribosomal protein L16 arginine hydroxylase%3B 2-oxoglutarate oxygenase;protein_id=NP_415646.4;transl_table=11 NC_000913.3 RefSeq gene 1188316 1189776 . - . ID=gene1143;Dbxref=EcoGene:EG10732,GeneID:946326;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;gene_synonym=ECK1115,JW1115;locus_tag=b1129 NC_000913.3 RefSeq CDS 1188316 1189776 . - 0 ID=cds1106;Parent=gene1143;Dbxref=ASAP:ABE-0003805,UniProtKB/Swiss-Prot:P23837,Genbank:NP_415647.1,EcoGene:EG10732,GeneID:946326;Name=NP_415647.1;Note=sensor protein PhoQ;gbkey=CDS;gene=phoQ;product=sensory histidine kinase in two-component regulatory system with PhoP;protein_id=NP_415647.1;transl_table=11 NC_000913.3 RefSeq gene 1189776 1190447 . - . ID=gene1144;Dbxref=EcoGene:EG10731,GeneID:945697;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;gene_synonym=ECK1116,JW1116;locus_tag=b1130 NC_000913.3 RefSeq CDS 1189776 1190447 . - 0 ID=cds1107;Parent=gene1144;Dbxref=ASAP:ABE-0003807,UniProtKB/Swiss-Prot:P23836,Genbank:NP_415648.1,EcoGene:EG10731,GeneID:945697;Name=NP_415648.1;Note=transcriptional regulatory protein;gbkey=CDS;gene=phoP;product=response regulator in two-component regulatory system with PhoQ;protein_id=NP_415648.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1190580 1190602 . + . ID=id164;Note=REP106 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1190616 1191986 . - . ID=gene1145;Dbxref=EcoGene:EG11314,GeneID:945695;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;gene_synonym=ade,ECK1117,JW1117;locus_tag=b1131 NC_000913.3 RefSeq CDS 1190616 1191986 . - 0 ID=cds1108;Parent=gene1145;Dbxref=ASAP:ABE-0003810,UniProtKB/Swiss-Prot:P0AB89,Genbank:NP_415649.1,EcoGene:EG11314,GeneID:945695;Name=NP_415649.1;gbkey=CDS;gene=purB;product=adenylosuccinate lyase;protein_id=NP_415649.1;transl_table=11 NC_000913.3 RefSeq gene 1191990 1192631 . - . ID=gene1146;Dbxref=EcoGene:EG11345,GeneID:945693;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;gene_synonym=ECK1118,hslZ,JW5165,ycfC;locus_tag=b1132 NC_000913.3 RefSeq CDS 1191990 1192631 . - 0 ID=cds1109;Parent=gene1146;Dbxref=ASAP:ABE-0003812,UniProtKB/Swiss-Prot:P25746,Genbank:NP_415650.1,EcoGene:EG11345,GeneID:945693;Name=NP_415650.1;gbkey=CDS;gene=hflD;product=putative lysogenization regulator;protein_id=NP_415650.1;transl_table=11 NC_000913.3 RefSeq gene 1192667 1193773 . - . ID=gene1147;Dbxref=EcoGene:EG11344,GeneID:945690;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=asuE,ECK1119,JW1119,trmU,ycfB;locus_tag=b1133 NC_000913.3 RefSeq CDS 1192667 1193773 . - 0 ID=cds1110;Parent=gene1147;Dbxref=ASAP:ABE-0003815,UniProtKB/Swiss-Prot:P25745,Genbank:NP_415651.4,EcoGene:EG11344,GeneID:945690;Name=NP_415651.4;gbkey=CDS;gene=mnmA;product=tRNA(Gln%2CLys%2CGlu) U34 2-thiouridylase;protein_id=NP_415651.4;transl_table=11 NC_000913.3 RefSeq gene 1193827 1194288 . - . ID=gene1148;Dbxref=EcoGene:EG13446,GeneID:945689;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;gene_synonym=ECK1120,JW1120,ymfB;locus_tag=b1134 NC_000913.3 RefSeq CDS 1193827 1194288 . - 0 ID=cds1111;Parent=gene1148;Dbxref=ASAP:ABE-0003818,UniProtKB/Swiss-Prot:P0AEI6,Genbank:NP_415652.1,EcoGene:EG13446,GeneID:945689;Name=NP_415652.1;gbkey=CDS;gene=nudJ;product=bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase;protein_id=NP_415652.1;transl_table=11 NC_000913.3 RefSeq gene 1194298 1194951 . - . ID=gene1149;Dbxref=EcoGene:EG13447,GeneID:945701;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;gene_synonym=ECK1121,JW1121,ymfC;locus_tag=b1135 NC_000913.3 RefSeq CDS 1194298 1194951 . - 0 ID=cds1112;Parent=gene1149;Dbxref=ASAP:ABE-0003820,UniProtKB/Swiss-Prot:P75966,Genbank:NP_415653.4,EcoGene:EG13447,GeneID:945701;Name=NP_415653.4;gbkey=CDS;gene=rluE;product=23S rRNA pseudouridine(2457) synthase;protein_id=NP_415653.4;transl_table=11 NC_000913.3 RefSeq gene 1195123 1196373 . + . ID=gene1150;Dbxref=EcoGene:EG10489,GeneID:945702;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;gene_synonym=ECK1122,icdA,icdE,JW1122;locus_tag=b1136 NC_000913.3 RefSeq CDS 1195123 1196373 . + 0 ID=cds1113;Parent=gene1150;Dbxref=ASAP:ABE-0003823,UniProtKB/Swiss-Prot:P08200,Genbank:NP_415654.1,EcoGene:EG10489,GeneID:945702;Name=NP_415654.1;Note=isocitrate dehydrogenase%2C specific for NADP+;gbkey=CDS;gene=icd;product=isocitrate dehydrogenase%3B e14 prophage attachment site%3B tellurite reductase;protein_id=NP_415654.1;transl_table=11 NC_000913.3 RefSeq region 1196220 1211412 . + . ID=id165;Note=cryptic prophage e14;gbkey=misc_feature;gene=icd NC_000913.3 RefSeq gene 1196867 1197532 . - . ID=gene1151;Dbxref=EcoGene:EG13448,GeneID:945329;Name=ymfD;gbkey=Gene;gene=ymfD;gene_biotype=protein_coding;gene_synonym=ECK1123,JW1123;locus_tag=b1137 NC_000913.3 RefSeq CDS 1196867 1197532 . - 0 ID=cds1114;Parent=gene1151;Dbxref=ASAP:ABE-0003825,UniProtKB/Swiss-Prot:P75967,Genbank:NP_415655.1,EcoGene:EG13448,GeneID:945329;Name=NP_415655.1;gbkey=CDS;gene=ymfD;product=e14 prophage%3B putative SAM-dependent methyltransferase;protein_id=NP_415655.1;transl_table=11 NC_000913.3 RefSeq gene 1197533 1198237 . - . ID=gene1152;Dbxref=EcoGene:EG13449,GeneID:946722;Name=ymfE;gbkey=Gene;gene=ymfE;gene_biotype=protein_coding;gene_synonym=ECK1124,JW5166;locus_tag=b1138 NC_000913.3 RefSeq CDS 1197533 1198237 . - 0 ID=cds1115;Parent=gene1152;Dbxref=ASAP:ABE-0003827,UniProtKB/Swiss-Prot:P75968,Genbank:NP_415656.1,EcoGene:EG13449,GeneID:946722;Name=NP_415656.1;gbkey=CDS;gene=ymfE;product=e14 prophage%3B putative inner membrane protein;protein_id=NP_415656.1;transl_table=11 NC_000913.3 RefSeq gene 1198695 1199588 . + . ID=gene1153;Dbxref=EcoGene:EG10535,GeneID:948421;Name=lit;gbkey=Gene;gene=lit;gene_biotype=protein_coding;gene_synonym=ECK1125,JW1125;locus_tag=b1139 NC_000913.3 RefSeq CDS 1198695 1199588 . + 0 ID=cds1116;Parent=gene1153;Dbxref=ASAP:ABE-0003834,UniProtKB/Swiss-Prot:P11072,Genbank:NP_415657.1,EcoGene:EG10535,GeneID:948421;Name=NP_415657.1;Note=phage T4 late gene expression%3B at locus of e14 element;gbkey=CDS;gene=lit;product=T4 phage exclusion protein%3B cell death peptidase%2C e14 prophage;protein_id=NP_415657.1;transl_table=11 NC_000913.3 RefSeq gene 1199679 1200806 . - . ID=gene1154;Dbxref=EcoGene:EG12370,GeneID:948034;Name=intE;gbkey=Gene;gene=intE;gene_biotype=protein_coding;gene_synonym=ECK1126,int,JW1126,ycfI;locus_tag=b1140 NC_000913.3 RefSeq CDS 1199679 1200806 . - 0 ID=cds1117;Parent=gene1154;Dbxref=ASAP:ABE-0003836,UniProtKB/Swiss-Prot:P75969,Genbank:NP_415658.1,EcoGene:EG12370,GeneID:948034;Name=NP_415658.1;Note=prophage e14 integrase;gbkey=CDS;gene=intE;product=e14 prophage%3B putative integrase;protein_id=NP_415658.1;transl_table=11 NC_000913.3 RefSeq gene 1200787 1201032 . - . ID=gene1155;Dbxref=EcoGene:EG14245,GeneID:945705;Name=xisE;gbkey=Gene;gene=xisE;gene_biotype=protein_coding;gene_synonym=ECK1127,JW1127,Vxis,ymfG;locus_tag=b1141 NC_000913.3 RefSeq CDS 1200787 1201032 . - 0 ID=cds1118;Parent=gene1155;Dbxref=ASAP:ABE-0003838,UniProtKB/Swiss-Prot:P75970,Genbank:NP_415659.1,EcoGene:EG14245,GeneID:945705;Name=NP_415659.1;gbkey=CDS;gene=xisE;product=e14 prophage%3B putative excisionase;protein_id=NP_415659.1;transl_table=11 NC_000913.3 RefSeq gene 1201497 1201838 . + . ID=gene1156;Dbxref=EcoGene:EG14247,GeneID:945712;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;gene_synonym=ECK1129,JW5168;locus_tag=b1143 NC_000913.3 RefSeq CDS 1201497 1201838 . + 0 ID=cds1119;Parent=gene1156;Dbxref=ASAP:ABE-0003846,UniProtKB/Swiss-Prot:P75972,Genbank:NP_415661.2,EcoGene:EG14247,GeneID:945712;Name=NP_415661.2;gbkey=CDS;gene=ymfI;product=e14 prophage%3B uncharacterized protein;protein_id=NP_415661.2;transl_table=11 NC_000913.3 RefSeq gene 1201776 1202084 . - . ID=gene1157;Dbxref=EcoGene:EG14248,GeneID:945718;Name=ymfJ;gbkey=Gene;gene=ymfJ;gene_biotype=protein_coding;gene_synonym=ECK1130;locus_tag=b1144 NC_000913.3 RefSeq CDS 1201776 1202084 . - 0 ID=cds1120;Parent=gene1157;Dbxref=ASAP:ABE-0003848,UniProtKB/Swiss-Prot:P75973,Genbank:NP_415662.2,EcoGene:EG14248,GeneID:945718;Name=NP_415662.2;gbkey=CDS;gene=ymfJ;product=e14 prophage%3B uncharacterized protein;protein_id=NP_415662.2;transl_table=11 NC_000913.3 RefSeq gene 1202259 1202933 . - . ID=gene1158;Dbxref=EcoGene:EG14249,GeneID:945719;Name=cohE;gbkey=Gene;gene=cohE;gene_biotype=protein_coding;gene_synonym=ECK1131,JW1131,ymfK;locus_tag=b1145 NC_000913.3 RefSeq CDS 1202259 1202933 . - 0 ID=cds1121;Parent=gene1158;Dbxref=ASAP:ABE-0003851,UniProtKB/Swiss-Prot:P75974,Genbank:NP_415663.1,EcoGene:EG14249,GeneID:945719;Name=NP_415663.1;gbkey=CDS;gene=cohE;product=e14 prophage%3B repressor protein phage e14;protein_id=NP_415663.1;transl_table=11 NC_000913.3 RefSeq gene 1203024 1203224 . + . ID=gene1159;Dbxref=EcoGene:EG14414,GeneID:945720;Name=croE;gbkey=Gene;gene=croE;gene_biotype=protein_coding;gene_synonym=ECK4469,JW5169,ymfT;locus_tag=b1146 NC_000913.3 RefSeq CDS 1203024 1203224 . + 0 ID=cds1122;Parent=gene1159;Dbxref=ASAP:ABE-0003856,UniProtKB/Swiss-Prot:P75975,Genbank:NP_415664.2,EcoGene:EG14414,GeneID:945720;Name=NP_415664.2;gbkey=CDS;gene=croE;product=e14 prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_415664.2;transl_table=11 NC_000913.3 RefSeq gene 1203268 1203825 . + . ID=gene1160;Dbxref=EcoGene:EG14250,GeneID:945717;Name=ymfL;gbkey=Gene;gene=ymfL;gene_biotype=protein_coding;gene_synonym=ECK1133,JW1133;locus_tag=b1147 NC_000913.3 RefSeq CDS 1203268 1203825 . + 0 ID=cds1123;Parent=gene1160;Dbxref=ASAP:ABE-0003860,UniProtKB/Swiss-Prot:P75976,Genbank:NP_415665.2,EcoGene:EG14250,GeneID:945717;Name=NP_415665.2;gbkey=CDS;gene=ymfL;product=e14 prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_415665.2;transl_table=11 NC_000913.3 RefSeq gene 1203822 1204160 . + . ID=gene1161;Dbxref=EcoGene:EG14251,GeneID:945715;Name=ymfM;gbkey=Gene;gene=ymfM;gene_biotype=protein_coding;gene_synonym=ECK1134,JW1134;locus_tag=b1148 NC_000913.3 RefSeq CDS 1203822 1204160 . + 0 ID=cds1124;Parent=gene1161;Dbxref=ASAP:ABE-0003862,UniProtKB/Swiss-Prot:P75977,Genbank:NP_415666.1,EcoGene:EG14251,GeneID:945715;Name=NP_415666.1;gbkey=CDS;gene=ymfM;product=e14 prophage%3B uncharacterized protein;protein_id=NP_415666.1;transl_table=11 NC_000913.3 RefSeq gene 1204170 1204403 . + . ID=gene1162;Dbxref=EcoGene:EG14495,GeneID:7751644;Name=oweE;gbkey=Gene;gene=oweE;gene_biotype=pseudogene;gene_synonym=ECK4507;locus_tag=b4692;pseudo=true NC_000913.3 RefSeq CDS 1204170 1204403 . + 0 ID=cds1125;Parent=gene1162;Dbxref=EcoGene:EG14495,GeneID:7751644;Note=pseudogene%2C lambda replication protein O homolog%3B CPS-53/KpLE1 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=oweE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1204404 1205537 . + . ID=gene1163;Dbxref=EcoGene:EG14252,GeneID:7751645;Name=aaaE;gbkey=Gene;gene=aaaE;gene_biotype=pseudogene;gene_synonym=ECK1135,JW1135,ymfN;locus_tag=b4693;pseudo=true NC_000913.3 RefSeq CDS 1204404 1205537 . + 0 ID=cds1126;Parent=gene1163;Dbxref=ASAP:ABE-0003865,UniProtKB/Swiss-Prot:P75978,EcoGene:EG14252,GeneID:7751645;Note=pseudogene%2C phage terminase protein A family%2C e14 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=aaaE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1205549 1205731 . + . ID=gene1164;Dbxref=EcoGene:EG14336,GeneID:945700;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;gene_synonym=ECK1136,JW1136;locus_tag=b1150 NC_000913.3 RefSeq CDS 1205549 1205731 . + 0 ID=cds1127;Parent=gene1164;Dbxref=ASAP:ABE-0003868,UniProtKB/Swiss-Prot:P75979,Genbank:NP_415668.1,EcoGene:EG14336,GeneID:945700;Name=NP_415668.1;gbkey=CDS;gene=ymfR;product=e14 prophage%3B uncharacterized protein;protein_id=NP_415668.1;transl_table=11 NC_000913.3 RefSeq gene 1205731 1206142 . + . ID=gene1165;Dbxref=EcoGene:EG14253,GeneID:945698;Name=beeE;gbkey=Gene;gene=beeE;gene_biotype=pseudogene;gene_synonym=ECK1137,JW1137,ymfO;locus_tag=b1151;pseudo=true NC_000913.3 RefSeq CDS 1205731 1206142 . + 0 ID=cds1128;Parent=gene1165;Dbxref=ASAP:ABE-0003870,UniProtKB/Swiss-Prot:P75980,EcoGene:EG14253,GeneID:945698;Note=pseudogene%2C portal protein family%2C e14 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=beeE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1206143 1206922 . + . ID=gene1166;Dbxref=EcoGene:EG14254,GeneID:945703;Name=jayE;gbkey=Gene;gene=jayE;gene_biotype=pseudogene;gene_synonym=ECK1138,JW5170,ymfP;locus_tag=b1152;pseudo=true NC_000913.3 RefSeq CDS 1206143 1206922 . + 0 ID=cds1129;Parent=gene1166;Dbxref=ASAP:ABE-0003872,UniProtKB/Swiss-Prot:P75981,EcoGene:EG14254,GeneID:945703;Note=pseudogene%2C e14 prophage%3BPhage or Prophage Related;gbkey=CDS;gene=jayE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1206913 1207497 . + . ID=gene1167;Dbxref=EcoGene:EG14255,GeneID:945707;Name=ymfQ;gbkey=Gene;gene=ymfQ;gene_biotype=protein_coding;gene_synonym=ECK1139,JW1139;locus_tag=b1153 NC_000913.3 RefSeq CDS 1206913 1207497 . + 0 ID=cds1130;Parent=gene1167;Dbxref=ASAP:ABE-0003874,UniProtKB/Swiss-Prot:P75982,Genbank:NP_415671.1,EcoGene:EG14255,GeneID:945707;Name=NP_415671.1;gbkey=CDS;gene=ymfQ;product=prohage e14 tail protein homolog;protein_id=NP_415671.1;transl_table=11 NC_000913.3 RefSeq gene 1207501 1208130 . + . ID=gene1168;Dbxref=EcoGene:EG12877,GeneID:945726;Name=stfP;gbkey=Gene;gene=stfP;gene_biotype=protein_coding;gene_synonym=ECK1140,JW1140,ycfK;locus_tag=b1154 NC_000913.3 RefSeq CDS 1207501 1208130 . + 0 ID=cds1131;Parent=gene1168;Dbxref=ASAP:ABE-0003876,UniProtKB/Swiss-Prot:P45581,Genbank:NP_415672.1,EcoGene:EG12877,GeneID:945726;Name=NP_415672.1;gbkey=CDS;gene=stfP;product=e14 prophage%3B uncharacterized protein;protein_id=NP_415672.1;transl_table=11 NC_000913.3 RefSeq gene 1208132 1208545 . + . ID=gene1169;Dbxref=EcoGene:EG14337,GeneID:945724;Name=tfaP;gbkey=Gene;gene=tfaP;gene_biotype=protein_coding;gene_synonym=ECK1141,JW5171,ymfS;locus_tag=b1155 NC_000913.3 RefSeq CDS 1208132 1208545 . + 0 ID=cds1132;Parent=gene1169;Dbxref=ASAP:ABE-0003878,UniProtKB/Swiss-Prot:P09154,Genbank:NP_415673.1,EcoGene:EG14337,GeneID:945724;Name=NP_415673.1;gbkey=CDS;gene=tfaP;product=e14 prophage%3B uncharacterized protein;protein_id=NP_415673.1;transl_table=11 NC_000913.3 RefSeq gene 1208517 1209119 . - . ID=gene1170;Dbxref=EcoGene:EG11120,GeneID:945723;Name=tfaE;gbkey=Gene;gene=tfaE;gene_biotype=protein_coding;gene_synonym=ECK1142,JW1142,ycfA;locus_tag=b1156 NC_000913.3 RefSeq CDS 1208517 1209119 . - 0 ID=cds1133;Parent=gene1170;Dbxref=ASAP:ABE-0003880,UniProtKB/Swiss-Prot:P09153,Genbank:NP_415674.1,EcoGene:EG11120,GeneID:945723;Name=NP_415674.1;gbkey=CDS;gene=tfaE;product=e14 prophage%3B putative tail fiber assembly protein;protein_id=NP_415674.1;transl_table=11 NC_000913.3 RefSeq gene 1209119 1209619 . - . ID=gene1171;Dbxref=EcoGene:EG11818,GeneID:945722;Name=stfE;gbkey=Gene;gene=stfE;gene_biotype=pseudogene;gene_synonym=ECK1143,JW5172,ycfE;locus_tag=b1157;pseudo=true NC_000913.3 RefSeq CDS 1209119 1209619 . - 0 ID=cds1134;Parent=gene1171;Dbxref=ASAP:ABE-0003882,UniProtKB/Swiss-Prot:P33227,EcoGene:EG11818,GeneID:945722;Note=pseudogene%2C e14 prophage%3B side tail fiber protein fragment family%3BPhage or Prophage Related;gbkey=CDS;gene=stfE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1209685 1210239 . + . ID=gene1172;Dbxref=EcoGene:EG10737,GeneID:945721;Name=pinE;gbkey=Gene;gene=pinE;gene_biotype=protein_coding;gene_synonym=ECK1144,JW1144,pin;locus_tag=b1158 NC_000913.3 RefSeq CDS 1209685 1210239 . + 0 ID=cds1135;Parent=gene1172;Dbxref=ASAP:ABE-0003888,UniProtKB/Swiss-Prot:P03014,Genbank:NP_415676.1,EcoGene:EG10737,GeneID:945721;Name=NP_415676.1;Note=inversion of adjacent DNA%3B at locus of e14 element;gbkey=CDS;gene=pinE;product=e14 prophage%3B site-specific DNA recombinase;protein_id=NP_415676.1;transl_table=11 NC_000913.3 RefSeq gene 1210346 1211179 . + . ID=gene1173;Dbxref=EcoGene:EG10573,GeneID:945727;Name=mcrA;gbkey=Gene;gene=mcrA;gene_biotype=protein_coding;gene_synonym=ECK1145,JW1145,rglA;locus_tag=b1159 NC_000913.3 RefSeq CDS 1210346 1211179 . + 0 ID=cds1136;Parent=gene1173;Dbxref=ASAP:ABE-0003891,UniProtKB/Swiss-Prot:P24200,Genbank:NP_415677.1,EcoGene:EG10573,GeneID:945727;Name=NP_415677.1;Note=restriction of DNA at 5-methylcytosine residues%3B at locus of e14 element;gbkey=CDS;gene=mcrA;product=putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease%3B 5-methylcytosine DNA binding protein;protein_id=NP_415677.1;transl_table=11 NC_000913.3 RefSeq gene 1211413 1211577 . + . ID=gene1174;Dbxref=EcoGene:EG10009,GeneID:4056026;Name=icdC;gbkey=Gene;gene=icdC;gene_biotype=pseudogene;gene_synonym=ECK1146,icd,JW5173;locus_tag=b4519;pseudo=true NC_000913.3 RefSeq CDS 1211413 1211577 . + 0 ID=cds1137;Parent=gene1174;Dbxref=ASAP:ABE-0285040,EcoGene:EG10009,GeneID:4056026;Note=pseudogene%2C isocitrate dehydrogenase C-terminal gene fragment~idcC' is a 54 codon 3' gene fragment created during e14 prophage insertion;gbkey=CDS;gene=icdC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1211680 1212003 . - . ID=gene1175;Dbxref=EcoGene:EG13885,GeneID:945729;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;gene_synonym=ECK1147,elb1,elbA,JW1147,ycgW;locus_tag=b1160 NC_000913.3 RefSeq CDS 1211680 1212003 . - 0 ID=cds1138;Parent=gene1175;Dbxref=ASAP:ABE-0003893,UniProtKB/Swiss-Prot:P75987,Genbank:NP_415678.1,EcoGene:EG13885,GeneID:945729;Name=NP_415678.1;gbkey=CDS;gene=iraM;product=RpoS stabilzer during Mg starvation%2C anti-RssB factor;protein_id=NP_415678.1;transl_table=11 NC_000913.3 RefSeq gene 1212703 1213107 . - . ID=gene1176;Dbxref=EcoGene:EG14244,GeneID:945733;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;gene_synonym=ECK1148,JW1148;locus_tag=b1161 NC_000913.3 RefSeq CDS 1212703 1213107 . - 0 ID=cds1139;Parent=gene1176;Dbxref=ASAP:ABE-0003897,UniProtKB/Swiss-Prot:P75988,Genbank:NP_415679.1,EcoGene:EG14244,GeneID:945733;Name=NP_415679.1;gbkey=CDS;gene=ycgX;product=DUF1398 family protein;protein_id=NP_415679.1;transl_table=11 NC_000913.3 RefSeq gene 1213328 1214059 . - . ID=gene1177;Dbxref=EcoGene:EG13886,GeneID:945735;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;gene_synonym=ECK1149,JW1149,ycgE;locus_tag=b1162 NC_000913.3 RefSeq CDS 1213328 1214059 . - 0 ID=cds1140;Parent=gene1177;Dbxref=ASAP:ABE-0003900,UniProtKB/Swiss-Prot:P75989,Genbank:NP_415680.1,EcoGene:EG13886,GeneID:945735;Name=NP_415680.1;Note=putative transcriptional regulator;gbkey=CDS;gene=bluR;product=repressor of blue light-responsive genes;protein_id=NP_415680.1;transl_table=11 NC_000913.3 RefSeq gene 1214264 1215475 . - . ID=gene1178;Dbxref=EcoGene:EG13887,GeneID:947592;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=protein_coding;gene_synonym=ECK1150,JW1150,ycgF;locus_tag=b1163 NC_000913.3 RefSeq CDS 1214264 1215475 . - 0 ID=cds1141;Parent=gene1178;Dbxref=ASAP:ABE-0003903,UniProtKB/Swiss-Prot:P75990,Genbank:NP_415681.1,EcoGene:EG13887,GeneID:947592;Name=NP_415681.1;gbkey=CDS;gene=bluF;product=anti-repressor for YcgE%2C blue light-responsive%3B FAD-binding%3B inactive c-di-GMP phosphodiesterase-like EAL domain protein;protein_id=NP_415681.1;transl_table=11 NC_000913.3 RefSeq gene 1215789 1216025 . + . ID=gene1179;Dbxref=EcoGene:EG14288,GeneID:945885;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;gene_synonym=ECK1151,JW1151;locus_tag=b1164 NC_000913.3 RefSeq CDS 1215789 1216025 . + 0 ID=cds1142;Parent=gene1179;Dbxref=ASAP:ABE-0003907,UniProtKB/Swiss-Prot:P75991,Genbank:NP_415682.1,EcoGene:EG14288,GeneID:945885;Name=NP_415682.1;gbkey=CDS;gene=ycgZ;product=RcsB connector protein for regulation of biofilm and acid-resistance;protein_id=NP_415682.1;transl_table=11 NC_000913.3 RefSeq gene 1216068 1216340 . + . ID=gene1180;Dbxref=EcoGene:EG14289,GeneID:948991;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;gene_synonym=ECK1152,JW1152;locus_tag=b1165 NC_000913.3 RefSeq CDS 1216068 1216340 . + 0 ID=cds1143;Parent=gene1180;Dbxref=ASAP:ABE-0003909,UniProtKB/Swiss-Prot:P75992,Genbank:NP_415683.1,EcoGene:EG14289,GeneID:948991;Name=NP_415683.1;gbkey=CDS;gene=ymgA;product=RcsB connector protein for regulation of biofilm;protein_id=NP_415683.1;transl_table=11 NC_000913.3 RefSeq gene 1216369 1216635 . + . ID=gene1181;Dbxref=EcoGene:EG14290,GeneID:945340;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ECK1153,JW1153,ymgB;locus_tag=b1166 NC_000913.3 RefSeq CDS 1216369 1216635 . + 0 ID=cds1144;Parent=gene1181;Dbxref=ASAP:ABE-0003911,UniProtKB/Swiss-Prot:P75993,Genbank:NP_415684.1,EcoGene:EG14290,GeneID:945340;Name=NP_415684.1;gbkey=CDS;gene=ariR;product=RcsB connector protein for regulation of biofilm and acid-resistance;protein_id=NP_415684.1;transl_table=11 NC_000913.3 RefSeq gene 1216748 1216996 . + . ID=gene1182;Dbxref=EcoGene:EG14291,GeneID:945090;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;gene_synonym=ECK1154,JW1154;locus_tag=b1167 NC_000913.3 RefSeq CDS 1216748 1216996 . + 0 ID=cds1145;Parent=gene1182;Dbxref=ASAP:ABE-0003915,UniProtKB/Swiss-Prot:P75994,Genbank:NP_415685.1,EcoGene:EG14291,GeneID:945090;Name=NP_415685.1;gbkey=CDS;gene=ymgC;product=Blue light%2C low temperature and stress induced protein;protein_id=NP_415685.1;transl_table=11 NC_000913.3 RefSeq gene 1217328 1218851 . + . ID=gene1183;Dbxref=EcoGene:EG13888,GeneID:945738;Name=ycgG;gbkey=Gene;gene=ycgG;gene_biotype=protein_coding;gene_synonym=ECK1155,JW5174;locus_tag=b1168 NC_000913.3 RefSeq CDS 1217328 1218851 . + 0 ID=cds1146;Parent=gene1183;Dbxref=ASAP:ABE-0003918,UniProtKB/Swiss-Prot:P75995,Genbank:NP_415686.2,EcoGene:EG13888,GeneID:945738;Name=NP_415686.2;Note=putative proteases;gbkey=CDS;gene=ycgG;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=NP_415686.2;transl_table=11 NC_000913.3 RefSeq gene 1218983 1219201 . + . ID=gene1184;Dbxref=EcoGene:EG14341,GeneID:1450253;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;gene_synonym=ECK1156,JW1156;locus_tag=b4520 NC_000913.3 RefSeq CDS 1218983 1219201 . + 0 ID=cds1147;Parent=gene1184;Dbxref=ASAP:ABE-0285041,UniProtKB/Swiss-Prot:P58034,Genbank:YP_588447.1,EcoGene:EG14341,GeneID:1450253;Name=YP_588447.1;gbkey=CDS;gene=ymgF;product=inner membrane division septum protein;protein_id=YP_588447.1;transl_table=11 NC_000913.3 RefSeq gene 1219601 1222248 . + . ID=gene1185;Dbxref=EcoGene:EG13889,GeneID:2847703;Name=ycgH;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;gene_synonym=ECK1157,JW5176,JW5901;locus_tag=b4491;pseudo=true NC_000913.3 RefSeq CDS 1219601 1222174 . + 0 ID=cds1148;Parent=gene1185;Dbxref=ASAP:ABE-0003921,ASAP:ABE-0003924,ASAP:ABE-0285092,EcoGene:EG13889,GeneID:2847703;Note=pseudogene~putative ATP-binding component of a transport system;gbkey=CDS;gene=ycgH;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1222174 1222248 . + 0 ID=cds1148;Parent=gene1185;Dbxref=ASAP:ABE-0003921,ASAP:ABE-0003924,ASAP:ABE-0285092,EcoGene:EG13889,GeneID:2847703;Note=pseudogene~putative ATP-binding component of a transport system;gbkey=CDS;gene=ycgH;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1222305 1222634 . - . ID=gene1186;Dbxref=EcoGene:EG14292,GeneID:945732;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;gene_synonym=ECK1158,JW5177;locus_tag=b1171 NC_000913.3 RefSeq CDS 1222305 1222634 . - 0 ID=cds1149;Parent=gene1186;Dbxref=ASAP:ABE-0003926,UniProtKB/Swiss-Prot:P0AB46,Genbank:NP_415689.2,EcoGene:EG14292,GeneID:945732;Name=NP_415689.2;gbkey=CDS;gene=ymgD;product=uncharacterized protein;protein_id=NP_415689.2;transl_table=11 NC_000913.3 RefSeq gene 1222644 1222988 . - . ID=gene1187;Dbxref=EcoGene:EG14415,GeneID:945728;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;gene_synonym=ECK4470;locus_tag=b1172 NC_000913.3 RefSeq CDS 1222644 1222988 . - 0 ID=cds1150;Parent=gene1187;Dbxref=ASAP:ABE-0003928,UniProtKB/Swiss-Prot:Q7DFV3,Genbank:NP_415690.5,EcoGene:EG14415,GeneID:945728;Name=NP_415690.5;gbkey=CDS;gene=ymgG;product=UPF0757 family protein;protein_id=NP_415690.5;transl_table=11 NC_000913.3 RefSeq gene 1222990 1223163 . - . ID=gene1188;Dbxref=EcoGene:EG14449,GeneID:5061515;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;gene_synonym=ECK4403;locus_tag=b4593 NC_000913.3 RefSeq CDS 1222990 1223163 . - 0 ID=cds1151;Parent=gene1188;Dbxref=UniProtKB/Swiss-Prot:A5A611,Genbank:YP_001165314.1,EcoGene:EG14449,GeneID:5061515;Name=YP_001165314.1;gbkey=CDS;gene=ymgI;product=uncharacterized protein;protein_id=YP_001165314.1;transl_table=11 NC_000913.3 RefSeq gene 1223264 1223449 . + . ID=gene1189;Dbxref=EcoGene:EG14450,GeneID:5061516;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;gene_synonym=ECK4404;locus_tag=b4594 NC_000913.3 RefSeq CDS 1223264 1223449 . + 0 ID=cds1152;Parent=gene1189;Dbxref=UniProtKB/Swiss-Prot:A5A612,Genbank:YP_001165315.1,EcoGene:EG14450,GeneID:5061516;Name=YP_001165315.1;gbkey=CDS;gene=ymgJ;product=uncharacterized protein;protein_id=YP_001165315.1;transl_table=11 NC_000913.3 RefSeq gene 1223564 1223907 . + . ID=gene1190;Dbxref=EcoGene:EG13890,GeneID:1450255;Name=ycgI;gbkey=Gene;gene=ycgI;gene_biotype=pseudogene;gene_synonym=ECK1161,JW1162,ymgH;locus_tag=b4521;pseudo=true NC_000913.3 RefSeq CDS 1223564 1223671 . + 0 ID=cds1153;Parent=gene1190;Dbxref=ASAP:ABE-0003933,ASAP:ABE-0285042,UniProtKB/Swiss-Prot:P76000,EcoGene:EG13890,GeneID:1450255;Note=pseudogene;gbkey=CDS;gene=ycgI;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1223671 1223907 . + 0 ID=cds1153;Parent=gene1190;Dbxref=ASAP:ABE-0003933,ASAP:ABE-0285042,UniProtKB/Swiss-Prot:P76000,EcoGene:EG13890,GeneID:1450255;Note=pseudogene;gbkey=CDS;gene=ycgI;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1224279 1224545 . - . ID=gene1191;Dbxref=EcoGene:EG10598,GeneID:945740;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;gene_synonym=ECK1162,JW1163,minB;locus_tag=b1174 NC_000913.3 RefSeq CDS 1224279 1224545 . - 0 ID=cds1154;Parent=gene1191;Dbxref=ASAP:ABE-0003935,UniProtKB/Swiss-Prot:P0A734,Genbank:NP_415692.1,EcoGene:EG10598,GeneID:945740;Name=NP_415692.1;Note=cell division topological specificity factor%2C reverses MinC inhibition of ftsZ ring formation;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=NP_415692.1;transl_table=11 NC_000913.3 RefSeq gene 1224549 1225361 . - . ID=gene1192;Dbxref=EcoGene:EG10597,GeneID:945741;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;gene_synonym=ECK1163,JW1164,minB;locus_tag=b1175 NC_000913.3 RefSeq CDS 1224549 1225361 . - 0 ID=cds1155;Parent=gene1192;Dbxref=ASAP:ABE-0003938,UniProtKB/Swiss-Prot:P0AEZ3,Genbank:NP_415693.1,EcoGene:EG10597,GeneID:945741;Name=NP_415693.1;Note=cell division inhibitor%2C a membrane ATPase%2C activates minC;gbkey=CDS;gene=minD;product=inhibitor of FtsZ ring polymerization%3B chromosome-membrane tethering protein%3B membrane ATPase of the MinCDEE system;protein_id=NP_415693.1;transl_table=11 NC_000913.3 RefSeq gene 1225385 1226080 . - . ID=gene1193;Dbxref=EcoGene:EG10596,GeneID:945744;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;gene_synonym=ECK1164,JW1165,minB;locus_tag=b1176 NC_000913.3 RefSeq CDS 1225385 1226080 . - 0 ID=cds1156;Parent=gene1193;Dbxref=ASAP:ABE-0003941,UniProtKB/Swiss-Prot:P18196,Genbank:NP_415694.1,EcoGene:EG10596,GeneID:945744;Name=NP_415694.1;Note=cell division inhibitor%2C inhibits ftsZ ring formation;gbkey=CDS;gene=minC;product=inhibitor of FtsZ ring polymerization;protein_id=NP_415694.1;transl_table=11 NC_000913.3 RefSeq gene 1226600 1226968 . + . ID=gene1194;Dbxref=EcoGene:EG13891,GeneID:946155;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;gene_synonym=ECK1165,JW1166;locus_tag=b1177 NC_000913.3 RefSeq CDS 1226600 1226968 . + 0 ID=cds1157;Parent=gene1194;Dbxref=ASAP:ABE-0003946,UniProtKB/Swiss-Prot:P76001,Genbank:NP_415695.1,EcoGene:EG13891,GeneID:946155;Name=NP_415695.1;gbkey=CDS;gene=ycgJ;product=uncharacterized protein;protein_id=NP_415695.1;transl_table=11 NC_000913.3 RefSeq gene 1227071 1227472 . - . ID=gene1195;Dbxref=EcoGene:EG13892,GeneID:946963;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;gene_synonym=ECK1166,JW1167,ycgK;locus_tag=b1178 NC_000913.3 RefSeq CDS 1227071 1227472 . - 0 ID=cds1158;Parent=gene1195;Dbxref=ASAP:ABE-0003948,UniProtKB/Swiss-Prot:P76002,Genbank:NP_415696.1,EcoGene:EG13892,GeneID:946963;Name=NP_415696.1;gbkey=CDS;gene=pliG;product=periplasmic inhibitor of g-type lysozyme;protein_id=NP_415696.1;transl_table=11 NC_000913.3 RefSeq gene 1227714 1228007 . + . ID=gene1196;Dbxref=EcoGene:EG13893,GeneID:946226;Name=ycgL;gbkey=Gene;gene=ycgL;gene_biotype=protein_coding;gene_synonym=ECK1167,JW1168;locus_tag=b1179 NC_000913.3 RefSeq CDS 1227714 1228007 . + 0 ID=cds1159;Parent=gene1196;Dbxref=ASAP:ABE-0003954,UniProtKB/Swiss-Prot:P0AB43,Genbank:NP_415697.4,EcoGene:EG13893,GeneID:946226;Name=NP_415697.4;gbkey=CDS;gene=ycgL;product=UPF0745 family protein;protein_id=NP_415697.4;transl_table=11 NC_000913.3 RefSeq gene 1228079 1228738 . + . ID=gene1197;Dbxref=EcoGene:EG13894,GeneID:946115;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;gene_synonym=ECK1168,JW1169;locus_tag=b1180 NC_000913.3 RefSeq CDS 1228079 1228738 . + 0 ID=cds1160;Parent=gene1197;Dbxref=ASAP:ABE-0003957,UniProtKB/Swiss-Prot:P76004,Genbank:NP_415698.1,EcoGene:EG13894,GeneID:946115;Name=NP_415698.1;Note=putative isomerase;gbkey=CDS;gene=ycgM;product=putative isomerase/hydrolase;protein_id=NP_415698.1;transl_table=11 NC_000913.3 RefSeq gene 1228815 1229276 . + . ID=gene1198;Dbxref=EcoGene:EG13895,GeneID:945804;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;gene_synonym=ECK1169,JW5180;locus_tag=b1181 NC_000913.3 RefSeq CDS 1228815 1229276 . + 0 ID=cds1161;Parent=gene1198;Dbxref=ASAP:ABE-0003960,UniProtKB/Swiss-Prot:P0A8L5,Genbank:NP_415699.5,EcoGene:EG13895,GeneID:945804;Name=NP_415699.5;gbkey=CDS;gene=ycgN;product=UPF0153 family cysteine cluster protein;protein_id=NP_415699.5;transl_table=11 NC_000913.3 RefSeq gene 1229483 1230394 . - . ID=gene1199;Dbxref=EcoGene:EG13243,GeneID:945745;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;gene_synonym=clyA,ECK1170,hpr,JW5181,sheA,ycgD;locus_tag=b1182 NC_000913.3 RefSeq CDS 1229483 1230394 . - 0 ID=cds1162;Parent=gene1199;Dbxref=ASAP:ABE-0003962,UniProtKB/Swiss-Prot:P77335,Genbank:NP_415700.4,EcoGene:EG13243,GeneID:945745;Name=NP_415700.4;gbkey=CDS;gene=hlyE;product=hemolysin E;protein_id=NP_415700.4;transl_table=11 NC_000913.3 RefSeq gene 1230767 1231186 . + . ID=gene1200;Dbxref=EcoGene:EG11057,GeneID:945746;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;gene_synonym=ECK1171,JW1172;locus_tag=b1183 NC_000913.3 RefSeq CDS 1230767 1231186 . + 0 ID=cds1163;Parent=gene1200;Dbxref=ASAP:ABE-0003974,UniProtKB/Swiss-Prot:P0AG11,Genbank:NP_415701.1,EcoGene:EG11057,GeneID:945746;Name=NP_415701.1;Note=SOS mutagenesis%3B error-prone repair%3B processed to UmuD'%3B forms complex with UmuC;gbkey=CDS;gene=umuD;product=translesion error-prone DNA polymerase V subunit%3B RecA-activated auto-protease;protein_id=NP_415701.1;transl_table=11 NC_000913.3 RefSeq gene 1231186 1232454 . + . ID=gene1201;Dbxref=EcoGene:EG11056,GeneID:946359;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;gene_synonym=ECK1172,JW1173,uvm;locus_tag=b1184 NC_000913.3 RefSeq CDS 1231186 1232454 . + 0 ID=cds1164;Parent=gene1201;Dbxref=ASAP:ABE-0003977,UniProtKB/Swiss-Prot:P04152,Genbank:NP_415702.1,EcoGene:EG11056,GeneID:946359;Name=NP_415702.1;Note=SOS mutagenesis and repair;gbkey=CDS;gene=umuC;product=translesion error-prone DNA polymerase V subunit%3B DNA polymerase activity;protein_id=NP_415702.1;transl_table=11 NC_000913.3 RefSeq gene 1232500 1233030 . - . ID=gene1202;Dbxref=EcoGene:EG11393,GeneID:946344;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;gene_synonym=dsbX,ECK1173,iarB,JW5182,roxB,ycgA;locus_tag=b1185 NC_000913.3 RefSeq CDS 1232500 1233030 . - 0 ID=cds1165;Parent=gene1202;Dbxref=ASAP:ABE-0003979,UniProtKB/Swiss-Prot:P0A6M2,Genbank:NP_415703.3,EcoGene:EG11393,GeneID:946344;Name=NP_415703.3;Note=reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella.;gbkey=CDS;gene=dsbB;product=oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I;protein_id=NP_415703.3;transl_table=11 NC_000913.3 RefSeq gene 1233176 1234717 . - . ID=gene1203;Dbxref=EcoGene:EG11392,GeneID:944822;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;gene_synonym=ECK1174,JW1175;locus_tag=b1186 NC_000913.3 RefSeq CDS 1233176 1234717 . - 0 ID=cds1166;Parent=gene1203;Dbxref=ASAP:ABE-0003984,UniProtKB/Swiss-Prot:P0AFA7,Genbank:NP_415704.1,EcoGene:EG11392,GeneID:944822;Name=NP_415704.1;Note=Na+/H+ antiporter%2C pH independent;gbkey=CDS;gene=nhaB;product=sodium:proton antiporter;protein_id=NP_415704.1;transl_table=11 NC_000913.3 RefSeq gene 1234938 1235657 . + . ID=gene1204;Dbxref=EcoGene:EG10281,GeneID:948652;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;gene_synonym=dec,ECK1175,JW1176,ole,oleR,thdB;locus_tag=b1187 NC_000913.3 RefSeq CDS 1234938 1235657 . + 0 ID=cds1167;Parent=gene1204;Dbxref=ASAP:ABE-0003988,UniProtKB/Swiss-Prot:P0A8V6,Genbank:NP_415705.1,EcoGene:EG10281,GeneID:948652;Name=NP_415705.1;Note=negative regulator for fad regulon%2C and positive activator of fabA;gbkey=CDS;gene=fadR;product=fatty acid metabolism regulon transcriptional regulator;protein_id=NP_415705.1;transl_table=11 NC_000913.3 RefSeq gene 1235709 1237241 . - . ID=gene1205;Dbxref=EcoGene:EG11516,GeneID:946365;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;gene_synonym=ECK1176,JW1177;locus_tag=b1188 NC_000913.3 RefSeq CDS 1235709 1237241 . - 0 ID=cds1168;Parent=gene1205;Dbxref=ASAP:ABE-0003990,UniProtKB/Swiss-Prot:P29013,Genbank:NP_415706.1,EcoGene:EG11516,GeneID:946365;Name=NP_415706.1;gbkey=CDS;gene=ycgB;product=SpoVR family stationary phase protein;protein_id=NP_415706.1;transl_table=11 NC_000913.3 RefSeq gene 1237571 1238869 . + . ID=gene1206;Dbxref=EcoGene:EG11407,GeneID:945752;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;gene_synonym=dadR,ECK1177,JW1178;locus_tag=b1189 NC_000913.3 RefSeq CDS 1237571 1238869 . + 0 ID=cds1169;Parent=gene1206;Dbxref=ASAP:ABE-0003995,UniProtKB/Swiss-Prot:P0A6J5,Genbank:NP_415707.1,EcoGene:EG11407,GeneID:945752;Name=NP_415707.1;Note=D-amino acid dehydrogenase subunit;gbkey=CDS;gene=dadA;product=D-amino acid dehydrogenase;protein_id=NP_415707.1;transl_table=11 NC_000913.3 RefSeq gene 1238879 1239949 . + . ID=gene1207;Dbxref=EcoGene:EG11408,GeneID:945754;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;gene_synonym=alnB,dadB,ECK1178,JW1179,msuA?;locus_tag=b1190 NC_000913.3 RefSeq CDS 1238879 1239949 . + 0 ID=cds1170;Parent=gene1207;Dbxref=ASAP:ABE-0003997,UniProtKB/Swiss-Prot:P29012,Genbank:NP_415708.1,EcoGene:EG11408,GeneID:945754;Name=NP_415708.1;Note=alanine racemase 2%2C catabolic;gbkey=CDS;gene=dadX;product=alanine racemase%2C catabolic%2C PLP-binding;protein_id=NP_415708.1;transl_table=11 NC_000913.3 RefSeq gene 1240335 1242071 . - . ID=gene1208;Dbxref=EcoGene:EG13896,GeneID:945755;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=ECK1179,JW5184,ycgO;locus_tag=b1191 NC_000913.3 RefSeq CDS 1240335 1242071 . - 0 ID=cds1171;Parent=gene1208;Dbxref=ASAP:ABE-0003999,UniProtKB/Swiss-Prot:P76007,Genbank:NP_415709.2,EcoGene:EG13896,GeneID:945755;Name=NP_415709.2;gbkey=CDS;gene=cvrA;product=putative cation/proton antiporter;protein_id=NP_415709.2;transl_table=11 NC_000913.3 RefSeq gene 1242166 1243080 . - . ID=gene1209;Dbxref=EcoGene:EG13898,GeneID:945756;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;gene_synonym=ECK1180,JW1181,ycgQ;locus_tag=b1192 NC_000913.3 RefSeq CDS 1242166 1243080 . - 0 ID=cds1172;Parent=gene1209;Dbxref=ASAP:ABE-0004002,UniProtKB/Swiss-Prot:P76008,Genbank:NP_415710.1,EcoGene:EG13898,GeneID:945756;Name=NP_415710.1;gbkey=CDS;gene=ldcA;product=murein tetrapeptide carboxypeptidase%3B LD-carboxypeptidase A;protein_id=NP_415710.1;transl_table=11 NC_000913.3 RefSeq gene 1243180 1243791 . + . ID=gene1210;Dbxref=EcoGene:EG13897,GeneID:945655;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;gene_synonym=ECK1181,JW5821,mltE,sltZ,ycgP;locus_tag=b1193 NC_000913.3 RefSeq CDS 1243180 1243791 . + 0 ID=cds1173;Parent=gene1210;Dbxref=ASAP:ABE-0004006,UniProtKB/Swiss-Prot:P0C960,Genbank:NP_415711.2,EcoGene:EG13897,GeneID:945655;Name=NP_415711.2;Note=murein transglycosylase E;gbkey=CDS;gene=emtA;product=lytic murein endotransglycosylase E;protein_id=NP_415711.2;transl_table=11 NC_000913.3 RefSeq gene 1243793 1244527 . - . ID=gene1211;Dbxref=EcoGene:EG13899,GeneID:947609;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;gene_synonym=ECK1182,JW1183;locus_tag=b1194 NC_000913.3 RefSeq CDS 1243793 1244527 . - 0 ID=cds1174;Parent=gene1211;Dbxref=ASAP:ABE-0004009,UniProtKB/Swiss-Prot:P76010,Genbank:NP_415712.1,EcoGene:EG13899,GeneID:947609;Name=NP_415712.1;gbkey=CDS;gene=ycgR;product=flagellar velocity braking protein%2C c-di-GMP-regulated;protein_id=NP_415712.1;transl_table=11 NC_000913.3 RefSeq gene 1244728 1244982 . + . ID=gene1212;Dbxref=EcoGene:EG14338,GeneID:945760;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;gene_synonym=ECK1183,JW1184,tag;locus_tag=b1195 NC_000913.3 RefSeq CDS 1244728 1244982 . + 0 ID=cds1175;Parent=gene1212;Dbxref=ASAP:ABE-0004014,UniProtKB/Swiss-Prot:P76011,Genbank:NP_415713.1,EcoGene:EG14338,GeneID:945760;Name=NP_415713.1;Note=transglycosylase asociated protein;gbkey=CDS;gene=ymgE;product=UPF0410 family putative inner membrane protein;protein_id=NP_415713.1;transl_table=11 NC_000913.3 RefSeq gene 1245160 1245600 . + . ID=gene1213;Dbxref=EcoGene:EG14275,GeneID:945761;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;gene_synonym=ECK1184,JW1185;locus_tag=b1196 NC_000913.3 RefSeq CDS 1245160 1245600 . + 0 ID=cds1176;Parent=gene1213;Dbxref=ASAP:ABE-0004019,UniProtKB/Swiss-Prot:P76012,Genbank:NP_415714.1,EcoGene:EG14275,GeneID:945761;Name=NP_415714.1;gbkey=CDS;gene=ycgY;product=uncharacterized protein;protein_id=NP_415714.1;transl_table=11 NC_000913.3 RefSeq gene 1245679 1247376 . - . ID=gene1214;Dbxref=EcoGene:EG11017,GeneID:945757;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;gene_synonym=ECK1185,JW1186,osmA;locus_tag=b1197 NC_000913.3 RefSeq CDS 1245679 1247376 . - 0 ID=cds1177;Parent=gene1214;Dbxref=ASAP:ABE-0004021,UniProtKB/Swiss-Prot:P13482,Genbank:NP_415715.1,EcoGene:EG11017,GeneID:945757;Name=NP_415715.1;Note=trehalase%2C periplasmic;gbkey=CDS;gene=treA;product=periplasmic trehalase;protein_id=NP_415715.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1247658 1247688 . + . ID=id166;Note=REP107 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1247696 1249114 . - . ID=gene1215;Dbxref=EcoGene:EG12399,GeneID:945749;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;gene_synonym=dhaH,ECK1186,JW5185,ptsD,ycgC;locus_tag=b1198 NC_000913.3 RefSeq CDS 1247696 1249114 . - 0 ID=cds1178;Parent=gene1215;Dbxref=ASAP:ABE-0004024,UniProtKB/Swiss-Prot:P37349,Genbank:NP_415716.4,EcoGene:EG12399,GeneID:945749;Name=NP_415716.4;Note=PTS hybrid protein;gbkey=CDS;gene=dhaM;product=putative dihydroxyacetone-specific PTS enzymes: HPr%2C EI components;protein_id=NP_415716.4;transl_table=11 NC_000913.3 RefSeq gene 1249125 1249757 . - . ID=gene1216;Dbxref=EcoGene:EG13900,GeneID:945748;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;gene_synonym=dhaK2,ECK1187,JW5186,ptsD,ycgS;locus_tag=b1199 NC_000913.3 RefSeq CDS 1249125 1249757 . - 0 ID=cds1179;Parent=gene1216;Dbxref=ASAP:ABE-0004026,UniProtKB/Swiss-Prot:P76014,Genbank:NP_415717.1,EcoGene:EG13900,GeneID:945748;Name=NP_415717.1;gbkey=CDS;gene=dhaL;product=dihydroxyacetone kinase%2C C-terminal domain;protein_id=NP_415717.1;transl_table=11 NC_000913.3 RefSeq gene 1249768 1250838 . - . ID=gene1217;Dbxref=EcoGene:EG13901,GeneID:945747;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;gene_synonym=dhaK1,ECK1188,JW5187,ptsD,ycgT;locus_tag=b1200 NC_000913.3 RefSeq CDS 1249768 1250838 . - 0 ID=cds1180;Parent=gene1217;Dbxref=ASAP:ABE-0004029,UniProtKB/Swiss-Prot:P76015,Genbank:NP_415718.6,EcoGene:EG13901,GeneID:945747;Name=NP_415718.6;gbkey=CDS;gene=dhaK;product=dihydroxyacetone kinase%2C PTS-dependent%2C dihydroxyacetone-binding subunit;protein_id=NP_415718.6;transl_table=11 NC_000913.3 RefSeq gene 1251066 1252985 . + . ID=gene1218;Dbxref=EcoGene:EG13902,GeneID:945743;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;gene_synonym=ECK1189,JW5188,ptsD,ycgU;locus_tag=b1201 NC_000913.3 RefSeq CDS 1251066 1252985 . + 0 ID=cds1181;Parent=gene1218;Dbxref=ASAP:ABE-0004033,UniProtKB/Swiss-Prot:P76016,Genbank:NP_415719.2,EcoGene:EG13902,GeneID:945743;Name=NP_415719.2;gbkey=CDS;gene=dhaR;product=dhaKLM operon transcription activator;protein_id=NP_415719.2;transl_table=11 NC_000913.3 RefSeq gene 1253085 1255952 . - . ID=gene1219;Dbxref=EcoGene:EG13903,GeneID:945767;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=protein_coding;gene_synonym=ECK1190,JW1193;locus_tag=b1202 NC_000913.3 RefSeq CDS 1253085 1255952 . - 0 ID=cds1182;Parent=gene1219;Dbxref=ASAP:ABE-0004035,UniProtKB/Swiss-Prot:P76017,Genbank:NP_415720.1,EcoGene:EG13903,GeneID:945767;Name=NP_415720.1;Note=putative adhesion and penetration protein;gbkey=CDS;gene=ycgV;product=putative adhesin;protein_id=NP_415720.1;transl_table=11 NC_000913.3 RefSeq gene 1256721 1257812 . - . ID=gene1220;Dbxref=EcoGene:EG11404,GeneID:945769;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;gene_synonym=ECK1191,engD,gtp1,JW1194;locus_tag=b1203 NC_000913.3 RefSeq CDS 1256721 1257812 . - 0 ID=cds1183;Parent=gene1220;Dbxref=ASAP:ABE-0004038,UniProtKB/Swiss-Prot:P0ABU2,Genbank:NP_415721.1,EcoGene:EG11404,GeneID:945769;Name=NP_415721.1;Note=putative GTP-binding protein;gbkey=CDS;gene=ychF;product=catalase inhibitor protein%3B ATPase%2C K+-dependent%2C ribosome-associated;protein_id=NP_415721.1;transl_table=11 NC_000913.3 RefSeq gene 1257929 1258513 . - . ID=gene1221;Dbxref=EcoGene:EG10785,GeneID:945765;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;gene_synonym=asuA?,ECK1192,JW1195,rap;locus_tag=b1204 NC_000913.3 RefSeq CDS 1257929 1258513 . - 0 ID=cds1184;Parent=gene1221;Dbxref=ASAP:ABE-0004043,UniProtKB/Swiss-Prot:P0A7D1,Genbank:NP_415722.1,EcoGene:EG10785,GeneID:945765;Name=NP_415722.1;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=NP_415722.1;transl_table=11 NC_000913.3 RefSeq gene 1258791 1259069 . + . ID=gene1222;Dbxref=EcoGene:EG11533,GeneID:945762;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;gene_synonym=ECK1193,JW1196;locus_tag=b1205 NC_000913.3 RefSeq CDS 1258791 1259069 . + 0 ID=cds1185;Parent=gene1222;Dbxref=ASAP:ABE-0004049,UniProtKB/Swiss-Prot:P0AB49,Genbank:NP_415723.1,EcoGene:EG11533,GeneID:945762;Name=NP_415723.1;gbkey=CDS;gene=ychH;product=DUF2583 family putative inner membrane protein;protein_id=NP_415723.1;transl_table=11 NC_000913.3 RefSeq gene 1259124 1260803 . - . ID=gene1223;Dbxref=EcoGene:EG12392,GeneID:945770;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;gene_synonym=ECK1194,JW5189,ychM;locus_tag=b1206 NC_000913.3 RefSeq CDS 1259124 1260803 . - 0 ID=cds1186;Parent=gene1223;Dbxref=ASAP:ABE-0004051,UniProtKB/Swiss-Prot:P0AFR2,Genbank:NP_415724.2,EcoGene:EG12392,GeneID:945770;Name=NP_415724.2;Note=putative sulfate transporter;gbkey=CDS;gene=dauA;product=C4-dicarboxylic acid transporter;protein_id=NP_415724.2;transl_table=11 NC_000913.3 RefSeq gene 1260928 1261875 . - . ID=gene1224;Dbxref=EcoGene:EG10774,GeneID:945772;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;gene_synonym=dnaR,ECK1195,JW1198,prsA;locus_tag=b1207 NC_000913.3 RefSeq CDS 1260928 1261875 . - 0 ID=cds1187;Parent=gene1224;Dbxref=ASAP:ABE-0004054,UniProtKB/Swiss-Prot:P0A717,Genbank:NP_415725.1,EcoGene:EG10774,GeneID:945772;Name=NP_415725.1;Note=phosphoribosylpyrophosphate synthetase;gbkey=CDS;gene=prs;product=phosphoribosylpyrophosphate synthase;protein_id=NP_415725.1;transl_table=11 NC_000913.3 RefSeq gene 1262026 1262877 . - . ID=gene1225;Dbxref=EcoGene:EG11294,GeneID:945774;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;gene_synonym=ECK1196,ipk,JW1199,ychB;locus_tag=b1208 NC_000913.3 RefSeq CDS 1262026 1262877 . - 0 ID=cds1188;Parent=gene1225;Dbxref=ASAP:ABE-0004056,UniProtKB/Swiss-Prot:P62615,Genbank:NP_415726.1,EcoGene:EG11294,GeneID:945774;Name=NP_415726.1;gbkey=CDS;gene=ispE;product=4-diphosphocytidyl-2-C-methylerythritol kinase;protein_id=NP_415726.1;transl_table=11 NC_000913.3 RefSeq gene 1262877 1263500 . - . ID=gene1226;Dbxref=EcoGene:EG11293,GeneID:945775;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;gene_synonym=ECK1197,hemM,JW1200,ychC;locus_tag=b1209 NC_000913.3 RefSeq CDS 1262877 1263500 . - 0 ID=cds1189;Parent=gene1226;Dbxref=ASAP:ABE-0004059,UniProtKB/Swiss-Prot:P61320,Genbank:NP_415727.1,EcoGene:EG11293,GeneID:945775;Name=NP_415727.1;Note=outer-membrane lipoprotein;gbkey=CDS;gene=lolB;product=lipoprotein localization factor;protein_id=NP_415727.1;transl_table=11 NC_000913.3 RefSeq gene 1263714 1264970 . + . ID=gene1227;Dbxref=EcoGene:EG10427,GeneID:945777;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;gene_synonym=ECK1198,gtrA,JW1201;locus_tag=b1210 NC_000913.3 RefSeq CDS 1263714 1264970 . + 0 ID=cds1190;Parent=gene1227;Dbxref=ASAP:ABE-0004064,UniProtKB/Swiss-Prot:P0A6X1,Genbank:NP_415728.1,EcoGene:EG10427,GeneID:945777;Name=NP_415728.1;Note=glutamyl-tRNA reductase;gbkey=CDS;gene=hemA;product=glutamyl tRNA reductase;protein_id=NP_415728.1;transl_table=11 NC_000913.3 RefSeq gene 1265012 1266094 . + . ID=gene1228;Dbxref=EcoGene:EG10761,GeneID:949002;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;gene_synonym=ECK1199,JW1202,sueB,uar,ups?;locus_tag=b1211 NC_000913.3 RefSeq CDS 1265012 1266094 . + 0 ID=cds1191;Parent=gene1228;Dbxref=ASAP:ABE-0004066,UniProtKB/Swiss-Prot:P0A7I0,Genbank:NP_415729.1,EcoGene:EG10761,GeneID:949002;Name=NP_415729.1;gbkey=CDS;gene=prfA;product=peptide chain release factor RF-1;protein_id=NP_415729.1;transl_table=11 NC_000913.3 RefSeq gene 1266094 1266927 . + . ID=gene1229;Dbxref=EcoGene:EG12424,GeneID:945779;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=ECK1200,hemK,JW1203;locus_tag=b1212 NC_000913.3 RefSeq CDS 1266094 1266927 . + 0 ID=cds1192;Parent=gene1229;Dbxref=ASAP:ABE-0004068,UniProtKB/Swiss-Prot:P0ACC1,Genbank:NP_415730.1,EcoGene:EG12424,GeneID:945779;Name=NP_415730.1;Note=possible protoporphyrinogen oxidase;gbkey=CDS;gene=prmC;product=RF-1 and RF-2 N5-glutamine methyltransferase;protein_id=NP_415730.1;transl_table=11 NC_000913.3 RefSeq gene 1266924 1267316 . + . ID=gene1230;Dbxref=EcoGene:EG14293,GeneID:945781;Name=ychQ;gbkey=Gene;gene=ychQ;gene_biotype=protein_coding;gene_synonym=ECK1201,JW1204,sirB2;locus_tag=b1213 NC_000913.3 RefSeq CDS 1266924 1267316 . + 0 ID=cds1193;Parent=gene1230;Dbxref=ASAP:ABE-0004071,UniProtKB/Swiss-Prot:Q46755,Genbank:NP_415731.1,EcoGene:EG14293,GeneID:945781;Name=NP_415731.1;gbkey=CDS;gene=ychQ;product=SIRB family inner membrane protein;protein_id=NP_415731.1;transl_table=11 NC_000913.3 RefSeq gene 1267320 1268129 . + . ID=gene1231;Dbxref=EcoGene:EG11251,GeneID:945784;Name=ychA;gbkey=Gene;gene=ychA;gene_biotype=protein_coding;gene_synonym=ECK1202,JW1205,sirB1;locus_tag=b1214 NC_000913.3 RefSeq CDS 1267320 1268129 . + 0 ID=cds1194;Parent=gene1231;Dbxref=ASAP:ABE-0004074,UniProtKB/Swiss-Prot:P0AGM5,Genbank:NP_415732.1,EcoGene:EG11251,GeneID:945784;Name=NP_415732.1;gbkey=CDS;gene=ychA;product=transglutaminase-like TPR-repeat protein;protein_id=NP_415732.1;transl_table=11 NC_000913.3 RefSeq gene 1268165 1269019 . + . ID=gene1232;Dbxref=EcoGene:EG10518,GeneID:945785;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;gene_synonym=ECK1203,JW1206;locus_tag=b1215 NC_000913.3 RefSeq CDS 1268165 1269019 . + 0 ID=cds1195;Parent=gene1232;Dbxref=ASAP:ABE-0004077,UniProtKB/Swiss-Prot:P0A715,Genbank:NP_415733.1,EcoGene:EG10518,GeneID:945785;Name=NP_415733.1;Note=2-dehydro-3-deoxyphosphooctulonate aldolase;gbkey=CDS;gene=kdsA;product=3-deoxy-D-manno-octulosonate 8-phosphate synthase;protein_id=NP_415733.1;transl_table=11 NC_000913.3 RefSeq gene 1269168 1269275 . - . ID=gene1233;Dbxref=EcoGene:EG14403,GeneID:2847733;Name=ldrA;gbkey=Gene;gene=ldrA;gene_biotype=protein_coding;gene_synonym=ECK1204,JW5957;locus_tag=b4419 NC_000913.3 RefSeq CDS 1269168 1269275 . - 0 ID=cds1196;Parent=gene1233;Dbxref=ASAP:ABE-0047280,UniProtKB/Swiss-Prot:Q6BF86,Genbank:YP_025297.1,EcoGene:EG14403,GeneID:2847733;Name=YP_025297.1;Note=small toxic polypeptide;gbkey=CDS;gene=ldrA;product=toxic polypeptide%2C small;protein_id=YP_025297.1;transl_table=11 NC_000913.3 RefSeq gene 1269323 1269389 . + . ID=gene1234;Dbxref=EcoGene:EG31139,GeneID:2847734;Name=rdlA;gbkey=Gene;gene=rdlA;gene_biotype=antisense_RNA;gene_synonym=ECK1205,JWR0229;locus_tag=b4420 NC_000913.3 RefSeq ncRNA 1269323 1269389 . + . ID=rna37;Parent=gene1234;Dbxref=ASAP:ABE-0047243,EcoGene:EG31139,GeneID:2847734;Note=antisense RNA%2C trans-acting regulator of ldrA translation;gbkey=ncRNA;gene=rdlA;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrA translation%3B proposed addiction module in LDR-A repeat%2C with toxic peptide LdrA NC_000913.3 RefSeq exon 1269323 1269389 . + . ID=id167;Parent=rna37;Dbxref=ASAP:ABE-0047243,EcoGene:EG31139,GeneID:2847734;Note=antisense RNA%2C trans-acting regulator of ldrA translation;gbkey=ncRNA;gene=rdlA;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrA translation%3B proposed addiction module in LDR-A repeat%2C with toxic peptide LdrA NC_000913.3 RefSeq gene 1269703 1269810 . - . ID=gene1235;Dbxref=EcoGene:EG14404,GeneID:2847735;Name=ldrB;gbkey=Gene;gene=ldrB;gene_biotype=protein_coding;gene_synonym=ECK1206,JW5958;locus_tag=b4421 NC_000913.3 RefSeq CDS 1269703 1269810 . - 0 ID=cds1197;Parent=gene1235;Dbxref=ASAP:ABE-0047281,UniProtKB/Swiss-Prot:Q6BF87,Genbank:YP_025298.1,EcoGene:EG14404,GeneID:2847735;Name=YP_025298.1;Note=small toxic polypeptide;gbkey=CDS;gene=ldrB;product=toxic polypeptide%2C small;protein_id=YP_025298.1;transl_table=11 NC_000913.3 RefSeq gene 1269858 1269923 . + . ID=gene1236;Dbxref=EcoGene:EG31140,GeneID:2847770;Name=rdlB;gbkey=Gene;gene=rdlB;gene_biotype=antisense_RNA;gene_synonym=ECK1207,JWR0230;locus_tag=b4422 NC_000913.3 RefSeq ncRNA 1269858 1269923 . + . ID=rna38;Parent=gene1236;Dbxref=ASAP:ABE-0047244,EcoGene:EG31140,GeneID:2847770;Note=antisense RNA%2C trans-acting regulator of ldrB translation;gbkey=ncRNA;gene=rdlB;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrB translation%3B proposed addiction module in LDR-B repeat%2C with toxic peptide LdrB NC_000913.3 RefSeq exon 1269858 1269923 . + . ID=id168;Parent=rna38;Dbxref=ASAP:ABE-0047244,EcoGene:EG31140,GeneID:2847770;Note=antisense RNA%2C trans-acting regulator of ldrB translation;gbkey=ncRNA;gene=rdlB;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrB translation%3B proposed addiction module in LDR-B repeat%2C with toxic peptide LdrB NC_000913.3 RefSeq gene 1270238 1270345 . - . ID=gene1237;Dbxref=EcoGene:EG14405,GeneID:2847775;Name=ldrC;gbkey=Gene;gene=ldrC;gene_biotype=protein_coding;gene_synonym=ECK1208,JW5959;locus_tag=b4423 NC_000913.3 RefSeq CDS 1270238 1270345 . - 0 ID=cds1198;Parent=gene1237;Dbxref=ASAP:ABE-0047282,UniProtKB/Swiss-Prot:Q6BF86,Genbank:YP_025299.1,EcoGene:EG14405,GeneID:2847775;Name=YP_025299.1;Note=small toxic polypeptide;gbkey=CDS;gene=ldrC;product=toxic polypeptide%2C small;protein_id=YP_025299.1;transl_table=11 NC_000913.3 RefSeq gene 1270393 1270460 . + . ID=gene1238;Dbxref=EcoGene:EG31141,GeneID:2847680;Name=rdlC;gbkey=Gene;gene=rdlC;gene_biotype=antisense_RNA;gene_synonym=ECK1209,JWR0231;locus_tag=b4424 NC_000913.3 RefSeq ncRNA 1270393 1270460 . + . ID=rna39;Parent=gene1238;Dbxref=ASAP:ABE-0047245,EcoGene:EG31141,GeneID:2847680;Note=antisense RNA%2C trans-acting regulator of ldrC translation;gbkey=ncRNA;gene=rdlC;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrC translation%3B proposed addiction module in LDR-C repeat%2C with toxic peptide LdrC NC_000913.3 RefSeq exon 1270393 1270460 . + . ID=id169;Parent=rna39;Dbxref=ASAP:ABE-0047245,EcoGene:EG31141,GeneID:2847680;Note=antisense RNA%2C trans-acting regulator of ldrC translation;gbkey=ncRNA;gene=rdlC;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrC translation%3B proposed addiction module in LDR-C repeat%2C with toxic peptide LdrC NC_000913.3 RefSeq gene 1270749 1271849 . - . ID=gene1239;Dbxref=EcoGene:EG11753,GeneID:945790;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;gene_synonym=ECK1210,JW1207;locus_tag=b1216 NC_000913.3 RefSeq CDS 1270749 1271849 . - 0 ID=cds1199;Parent=gene1239;Dbxref=ASAP:ABE-0004082,UniProtKB/Swiss-Prot:P31801,Genbank:NP_415734.1,EcoGene:EG11753,GeneID:945790;Name=NP_415734.1;Note=sodium-calcium/proton antiporter;gbkey=CDS;gene=chaA;product=calcium/sodium:proton antiporter;protein_id=NP_415734.1;transl_table=11 NC_000913.3 RefSeq gene 1272119 1272349 . + . ID=gene1240;Dbxref=EcoGene:EG12402,GeneID:945792;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;gene_synonym=ECK1211,JW1208;locus_tag=b1217 NC_000913.3 RefSeq CDS 1272119 1272349 . + 0 ID=cds1200;Parent=gene1240;Dbxref=ASAP:ABE-0004087,UniProtKB/Swiss-Prot:P0AE63,Genbank:NP_415735.1,EcoGene:EG12402,GeneID:945792;Name=NP_415735.1;Note=cation transport regulator;gbkey=CDS;gene=chaB;product=cation transport regulator;protein_id=NP_415735.1;transl_table=11 NC_000913.3 RefSeq gene 1272507 1273202 . + . ID=gene1241;Dbxref=EcoGene:EG12403,GeneID:945793;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;gene_synonym=ECK1212,JW1209;locus_tag=b1218 NC_000913.3 RefSeq CDS 1272507 1273202 . + 0 ID=cds1201;Parent=gene1241;Dbxref=ASAP:ABE-0004089,UniProtKB/Swiss-Prot:P39163,Genbank:NP_415736.2,EcoGene:EG12403,GeneID:945793;Name=NP_415736.2;Note=cation transport regulator;gbkey=CDS;gene=chaC;product=cation transport regulator;protein_id=NP_415736.2;transl_table=11 NC_000913.3 RefSeq gene 1273246 1273599 . - . ID=gene1242;Dbxref=EcoGene:EG12404,GeneID:945794;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;gene_synonym=ECK1213,JW1210;locus_tag=b1219 NC_000913.3 RefSeq CDS 1273246 1273599 . - 0 ID=cds1202;Parent=gene1242;Dbxref=ASAP:ABE-0004091,UniProtKB/Swiss-Prot:P0AB52,Genbank:NP_415737.1,EcoGene:EG12404,GeneID:945794;Name=NP_415737.1;gbkey=CDS;gene=ychN;product=putative sulfur relay protein;protein_id=NP_415737.1;transl_table=11 NC_000913.3 RefSeq gene 1273784 1275178 . + . ID=gene1243;Dbxref=EcoGene:EG12405,GeneID:945801;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=ECK1214,JW1211,ychP;locus_tag=b1220 NC_000913.3 RefSeq CDS 1273784 1275178 . + 0 ID=cds1203;Parent=gene1243;Dbxref=ASAP:ABE-0004095,UniProtKB/Swiss-Prot:P39165,Genbank:NP_415738.2,EcoGene:EG12405,GeneID:945801;Name=NP_415738.2;Note=conserved protein%2C invasin-like;gbkey=CDS;gene=ychO;product=putative invasin;protein_id=NP_415738.2;transl_table=11 NC_000913.3 RefSeq gene 1275179 1275829 . - . ID=gene1244;Dbxref=EcoGene:EG10643,GeneID:945795;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;gene_synonym=ECK1215,frdR,JW1212;locus_tag=b1221 NC_000913.3 RefSeq CDS 1275179 1275829 . - 0 ID=cds1204;Parent=gene1244;Dbxref=ASAP:ABE-0004097,UniProtKB/Swiss-Prot:P0AF28,Genbank:NP_415739.1,EcoGene:EG10643,GeneID:945795;Name=NP_415739.1;Note=pleiotrophic regulation of anaerobic respiration: response regulator for nar%2C frd%2C dms and tor genes;gbkey=CDS;gene=narL;product=response regulator in two-component regulatory system with NarX;protein_id=NP_415739.1;transl_table=11 NC_000913.3 RefSeq gene 1275822 1277618 . - . ID=gene1245;Dbxref=EcoGene:EG10646,GeneID:945788;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;gene_synonym=ECK1216,frdR,JW1213,narR;locus_tag=b1222 NC_000913.3 RefSeq CDS 1275822 1277618 . - 0 ID=cds1205;Parent=gene1245;Dbxref=ASAP:ABE-0004099,UniProtKB/Swiss-Prot:P0AFA2,Genbank:NP_415740.1,EcoGene:EG10646,GeneID:945788;Name=NP_415740.1;Note=nitrate/nitrate sensor%2C histidine protein kinase acts on NarL regulator;gbkey=CDS;gene=narX;product=sensory histidine kinase in two-component regulatory system with NarL;protein_id=NP_415740.1;transl_table=11 NC_000913.3 RefSeq gene 1277957 1279348 . + . ID=gene1246;Dbxref=EcoGene:EG10642,GeneID:945783;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;gene_synonym=ECK1217,JW1214;locus_tag=b1223 NC_000913.3 RefSeq CDS 1277957 1279348 . + 0 ID=cds1206;Parent=gene1246;Dbxref=ASAP:ABE-0004111,UniProtKB/Swiss-Prot:P10903,Genbank:NP_415741.1,EcoGene:EG10642,GeneID:945783;Name=NP_415741.1;Note=nitrite extrusion protein;gbkey=CDS;gene=narK;product=nitrate/nitrite transporter;protein_id=NP_415741.1;transl_table=11 NC_000913.3 RefSeq gene 1279864 1283607 . + . ID=gene1247;Dbxref=EcoGene:EG10638,GeneID:945782;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;gene_synonym=chlC,ECK1218,JW1215,narC;locus_tag=b1224 NC_000913.3 RefSeq CDS 1279864 1283607 . + 0 ID=cds1207;Parent=gene1247;Dbxref=ASAP:ABE-0004119,UniProtKB/Swiss-Prot:P09152,Genbank:NP_415742.1,EcoGene:EG10638,GeneID:945782;Name=NP_415742.1;gbkey=CDS;gene=narG;product=nitrate reductase 1%2C alpha subunit;protein_id=NP_415742.1;transl_table=11 NC_000913.3 RefSeq gene 1283604 1285142 . + . ID=gene1248;Dbxref=EcoGene:EG10639,GeneID:945780;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;gene_synonym=chlC,ECK1219,JW1216;locus_tag=b1225 NC_000913.3 RefSeq CDS 1283604 1285142 . + 0 ID=cds1208;Parent=gene1248;Dbxref=ASAP:ABE-0004121,UniProtKB/Swiss-Prot:P11349,Genbank:NP_415743.1,EcoGene:EG10639,GeneID:945780;Name=NP_415743.1;Note=nitrate reductase 1%2C beta subunit;gbkey=CDS;gene=narH;product=nitrate reductase 1%2C beta (Fe-S) subunit;protein_id=NP_415743.1;transl_table=11 NC_000913.3 RefSeq gene 1285139 1285849 . + . ID=gene1249;Dbxref=EcoGene:EG10641,GeneID:945807;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;gene_synonym=ECK1220,JW1217;locus_tag=b1226 NC_000913.3 RefSeq CDS 1285139 1285849 . + 0 ID=cds1209;Parent=gene1249;Dbxref=ASAP:ABE-0004123,UniProtKB/Swiss-Prot:P0AF26,Genbank:NP_415744.1,EcoGene:EG10641,GeneID:945807;Name=NP_415744.1;Note=nitrate reductase 1%2C delta subunit%2C assembly function;gbkey=CDS;gene=narJ;product=molybdenum-cofactor-assembly chaperone delta subunit of nitrate reductase 1;protein_id=NP_415744.1;transl_table=11 NC_000913.3 RefSeq gene 1285849 1286526 . + . ID=gene1250;Dbxref=EcoGene:EG10640,GeneID:945808;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;gene_synonym=chlI,ECK1221,JW1218;locus_tag=b1227 NC_000913.3 RefSeq CDS 1285849 1286526 . + 0 ID=cds1210;Parent=gene1250;Dbxref=ASAP:ABE-0004125,UniProtKB/Swiss-Prot:P11350,Genbank:NP_415745.1,EcoGene:EG10640,GeneID:945808;Name=NP_415745.1;Note=nitrate reductase 1%2C cytochrome b(NR)%2C gamma subunit;gbkey=CDS;gene=narI;product=nitrate reductase 1%2C gamma (cytochrome b(NR)) subunit;protein_id=NP_415745.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1286594 1286665 . + . ID=id170;Note=REP108 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1287066 1287236 . - . ID=gene1251;Dbxref=EcoGene:EG31131,GeneID:2847683;Name=rttR;gbkey=Gene;gene=rttR;gene_biotype=ncRNA;gene_synonym=ECK1223,JWR0232,rtT,rtV1;locus_tag=b4425 NC_000913.3 RefSeq ncRNA 1287066 1287236 . - . ID=rna40;Parent=gene1251;Dbxref=ASAP:ABE-0047246,EcoGene:EG31131,GeneID:2847683;Note=rtT RNA may modulate the stringent response~released from primary tyrT transcript during tRNA processing%3B encodes putative Tpr protein;gbkey=ncRNA;gene=rttR;ncrna_class=other;product=rtT sRNA%2C processed from tyrT transcript NC_000913.3 RefSeq exon 1287066 1287236 . - . ID=id171;Parent=rna40;Dbxref=ASAP:ABE-0047246,EcoGene:EG31131,GeneID:2847683;Note=rtT RNA may modulate the stringent response~released from primary tyrT transcript during tRNA processing%3B encodes putative Tpr protein;gbkey=ncRNA;gene=rttR;ncrna_class=other;product=rtT sRNA%2C processed from tyrT transcript NC_000913.3 RefSeq gene 1287087 1287176 . - . ID=gene1252;Dbxref=EcoGene:EG11016,GeneID:946224;Name=tpr;gbkey=Gene;gene=tpr;gene_biotype=protein_coding;gene_synonym=ECK1224,JW1219;locus_tag=b1229 NC_000913.3 RefSeq CDS 1287087 1287176 . - 0 ID=cds1211;Parent=gene1252;Dbxref=ASAP:ABE-0004131,UniProtKB/Swiss-Prot:P02338,Genbank:NP_415747.2,EcoGene:EG11016,GeneID:946224;Name=NP_415747.2;Note=a protamine-like protein;gbkey=CDS;gene=tpr;product=protamine-like protein;protein_id=NP_415747.2;transl_table=11 NC_000913.3 RefSeq gene 1287244 1287328 . - . ID=gene1253;Dbxref=EcoGene:EG30108,GeneID:945811;Name=tyrV;gbkey=Gene;gene=tyrV;gene_biotype=tRNA;gene_synonym=ECK1225,JWR0028,tyrTbeta;locus_tag=b1230 NC_000913.3 RefSeq tRNA 1287244 1287328 . - . ID=rna41;Parent=gene1253;Dbxref=ASAP:ABE-0004134,EcoGene:EG30108,GeneID:945811;Note=anticodon: GUA;gbkey=tRNA;gene=tyrV;product=tRNA-Tyr NC_000913.3 RefSeq exon 1287244 1287328 . - . ID=id172;Parent=rna41;Dbxref=ASAP:ABE-0004134,EcoGene:EG30108,GeneID:945811;Note=anticodon: GUA;gbkey=tRNA;gene=tyrV;product=tRNA-Tyr NC_000913.3 RefSeq gene 1287538 1287622 . - . ID=gene1254;Dbxref=EcoGene:EG30106,GeneID:945820;Name=tyrT;gbkey=Gene;gene=tyrT;gene_biotype=tRNA;gene_synonym=ECK1226,JWR0029,su,Su-3,Su-4,suIII,supC,supFsupO,tyrTalpha;locus_tag=b1231 NC_000913.3 RefSeq tRNA 1287538 1287622 . - . ID=rna42;Parent=gene1254;Dbxref=ASAP:ABE-0004136,EcoGene:EG30106,GeneID:945820;Note=anticodon: GUA;gbkey=tRNA;gene=tyrT;product=tRNA-Tyr NC_000913.3 RefSeq exon 1287538 1287622 . - . ID=id173;Parent=rna42;Dbxref=ASAP:ABE-0004136,EcoGene:EG30106,GeneID:945820;Note=anticodon: GUA;gbkey=tRNA;gene=tyrT;product=tRNA-Tyr NC_000913.3 RefSeq gene 1287782 1288624 . - . ID=gene1255;Dbxref=EcoGene:EG11819,GeneID:945827;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;gene_synonym=ECK1227,JW1220,tgs,ychI;locus_tag=b1232 NC_000913.3 RefSeq CDS 1287782 1288624 . - 0 ID=cds1212;Parent=gene1255;Dbxref=ASAP:ABE-0004138,UniProtKB/Swiss-Prot:P37051,Genbank:NP_415748.1,EcoGene:EG11819,GeneID:945827;Name=NP_415748.1;Note=formyltetrahydrofolate deformylase%3B for purT-dependent FGAR synthesis;gbkey=CDS;gene=purU;product=formyltetrahydrofolate hydrolase;protein_id=NP_415748.1;transl_table=11 NC_000913.3 RefSeq gene 1288674 1289132 . - . ID=gene1256;Dbxref=EcoGene:EG12119,GeneID:945828;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;gene_synonym=ECK1228,JW1221;locus_tag=b1233 NC_000913.3 RefSeq CDS 1288674 1289132 . - 0 ID=cds1213;Parent=gene1256;Dbxref=ASAP:ABE-0004140,UniProtKB/Swiss-Prot:P37052,Genbank:NP_415749.1,EcoGene:EG12119,GeneID:945828;Name=NP_415749.1;gbkey=CDS;gene=ychJ;product=UPF0225 family protein;protein_id=NP_415749.1;transl_table=11 NC_000913.3 RefSeq gene 1289245 1290150 . + . ID=gene1257;Dbxref=EcoGene:EG12120,GeneID:945725;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;gene_synonym=ECK1229,JW1222,ychK;locus_tag=b1234 NC_000913.3 RefSeq CDS 1289245 1290150 . + 0 ID=cds1214;Parent=gene1257;Dbxref=ASAP:ABE-0004144,UniProtKB/Swiss-Prot:P0AFR0,Genbank:NP_415750.2,EcoGene:EG12120,GeneID:945725;Name=NP_415750.2;gbkey=CDS;gene=rssA;product=putative patatin-like family phospholipase;protein_id=NP_415750.2;transl_table=11 NC_000913.3 RefSeq gene 1290242 1291255 . + . ID=gene1258;Dbxref=EcoGene:EG12121,GeneID:945855;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;gene_synonym=ECK1230,hnr,JW1223,mviA,sprE,verA,ychL;locus_tag=b1235 NC_000913.3 RefSeq CDS 1290242 1291255 . + 0 ID=cds1215;Parent=gene1258;Dbxref=ASAP:ABE-0004147,UniProtKB/Swiss-Prot:P0AEV1,Genbank:NP_415751.1,EcoGene:EG12121,GeneID:945855;Name=NP_415751.1;Note=Hnr protein;gbkey=CDS;gene=rssB;product=PcnB-degradosome interaction factor%3B response regulator;protein_id=NP_415751.1;transl_table=11 NC_000913.3 RefSeq gene 1291457 1292365 . + . ID=gene1259;Dbxref=EcoGene:EG11319,GeneID:945730;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;gene_synonym=ECK1231,JW1224,verA,ychD;locus_tag=b1236 NC_000913.3 RefSeq CDS 1291457 1292365 . + 0 ID=cds1216;Parent=gene1259;Dbxref=ASAP:ABE-0004150,UniProtKB/Swiss-Prot:P0AEP3,Genbank:NP_415752.1,EcoGene:EG11319,GeneID:945730;Name=NP_415752.1;gbkey=CDS;gene=galU;product=glucose-1-phosphate uridylyltransferase;protein_id=NP_415752.1;transl_table=11 NC_000913.3 RefSeq gene 1292509 1292922 . - . ID=gene1260;Dbxref=EcoGene:EG10457,GeneID:945829;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;gene_synonym=B1,bglY,cur,drc,drdX,drs,ECK1232,fimG,H1,hnsA,irk,JW1225,msyA,osmZ,pilG,topS,topX,verA,virR;locus_tag=b1237 NC_000913.3 RefSeq CDS 1292509 1292922 . - 0 ID=cds1217;Parent=gene1260;Dbxref=ASAP:ABE-0004152,UniProtKB/Swiss-Prot:P0ACF8,Genbank:NP_415753.1,EcoGene:EG10457,GeneID:945829;Name=NP_415753.1;Note=DNA-binding protein HLP-II (HU%2C BH2%2C HD%2C NS)%3B pleiotropic regulator;gbkey=CDS;gene=hns;product=global DNA-binding transcriptional dual regulator H-NS;protein_id=NP_415753.1;transl_table=11 NC_000913.3 RefSeq gene 1293527 1294144 . + . ID=gene1261;Dbxref=EcoGene:EG10994,GeneID:945834;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;gene_synonym=ECK1233,JW1226;locus_tag=b1238 NC_000913.3 RefSeq CDS 1293527 1294144 . + 0 ID=cds1218;Parent=gene1261;Dbxref=ASAP:ABE-0004157,UniProtKB/Swiss-Prot:P23331,Genbank:NP_415754.1,EcoGene:EG10994,GeneID:945834;Name=NP_415754.1;Note=thymidine kinase;gbkey=CDS;gene=tdk;product=thymidine kinase/deoxyuridine kinase;protein_id=NP_415754.1;transl_table=11 NC_000913.3 RefSeq region 1294426 1295405 . - . ID=id174;gbkey=mobile_element NC_000913.3 RefSeq gene 1294426 1295322 . - . ID=gene1262;Dbxref=EcoGene:EG11611,GeneID:4056037;Name=insZ;gbkey=Gene;gene=insZ;gene_biotype=pseudogene;gene_synonym=ECK1234,JW1227,JW5883,ychG,ychR;locus_tag=b4573;pseudo=true NC_000913.3 RefSeq CDS 1295140 1295322 . - 0 ID=cds1219;Parent=gene1262;Dbxref=ASAP:ABE-0004159,ASAP:ABE-0004161,ASAP:ABE-0285106,UniProtKB/Swiss-Prot:P30192,EcoGene:EG11611,GeneID:4056037;Note=pseudogene%2C transposase homolog;gbkey=CDS;gene=insZ;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1294992 1295141 . - 0 ID=cds1219;Parent=gene1262;Dbxref=ASAP:ABE-0004159,ASAP:ABE-0004161,ASAP:ABE-0285106,UniProtKB/Swiss-Prot:P30192,EcoGene:EG11611,GeneID:4056037;Note=pseudogene%2C transposase homolog;gbkey=CDS;gene=insZ;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1294426 1294992 . - 0 ID=cds1219;Parent=gene1262;Dbxref=ASAP:ABE-0004159,ASAP:ABE-0004161,ASAP:ABE-0285106,UniProtKB/Swiss-Prot:P30192,EcoGene:EG11611,GeneID:4056037;Note=pseudogene%2C transposase homolog;gbkey=CDS;gene=insZ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1295446 1298121 . - . ID=gene1263;Dbxref=EcoGene:EG10031,GeneID:945837;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC,ana,ECK1235,JW1228;locus_tag=b1241 NC_000913.3 RefSeq CDS 1295446 1298121 . - 0 ID=cds1220;Parent=gene1263;Dbxref=ASAP:ABE-0004164,UniProtKB/Swiss-Prot:P0A9Q7,Genbank:NP_415757.1,EcoGene:EG10031,GeneID:945837;Name=NP_415757.1;Note=CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase%3B pyruvate-formate-lyase deactivase;gbkey=CDS;gene=adhE;product=fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase;protein_id=NP_415757.1;transl_table=11 NC_000913.3 RefSeq gene 1298598 1299245 . + . ID=gene1264;Dbxref=EcoGene:EG11342,GeneID:945836;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;gene_synonym=ECK1236,JW1229;locus_tag=b1242 NC_000913.3 RefSeq CDS 1298598 1299245 . + 0 ID=cds1221;Parent=gene1264;Dbxref=ASAP:ABE-0004168,UniProtKB/Swiss-Prot:P25743,Genbank:NP_415758.1,EcoGene:EG11342,GeneID:945836;Name=NP_415758.1;Note=putative channel protein;gbkey=CDS;gene=ychE;product=UPF0056 family inner membrane protein;protein_id=NP_415758.1;transl_table=11 NC_000913.3 RefSeq region 1299499 1300693 . + . ID=id175;gbkey=mobile_element NC_000913.3 RefSeq gene 1301182 1302813 . + . ID=gene1265;Dbxref=EcoGene:EG10674,GeneID:945830;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;gene_synonym=ECK1237,JW1235;locus_tag=b1243 NC_000913.3 RefSeq CDS 1301182 1302813 . + 0 ID=cds1222;Parent=gene1265;Dbxref=ASAP:ABE-0004172,UniProtKB/Swiss-Prot:P23843,Genbank:NP_415759.1,EcoGene:EG10674,GeneID:945830;Name=NP_415759.1;Note=oligopeptide transport%3B periplasmic binding protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=oppA;product=oligopeptide ABC transporter periplasmic binding protein;protein_id=NP_415759.1;transl_table=11 NC_000913.3 RefSeq gene 1302899 1303819 . + . ID=gene1266;Dbxref=EcoGene:EG10675,GeneID:945823;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;gene_synonym=ECK1238,JW1236,stkB;locus_tag=b1244 NC_000913.3 RefSeq CDS 1302899 1303819 . + 0 ID=cds1223;Parent=gene1266;Dbxref=ASAP:ABE-0004174,UniProtKB/Swiss-Prot:P0AFH2,Genbank:NP_415760.1,EcoGene:EG10675,GeneID:945823;Name=NP_415760.1;Note=oligopeptide transport permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=oppB;product=oligopeptide ABC transporter permease;protein_id=NP_415760.1;transl_table=11 NC_000913.3 RefSeq gene 1303834 1304742 . + . ID=gene1267;Dbxref=EcoGene:EG10676,GeneID:945810;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;gene_synonym=ECK1239,JW1237,stkB;locus_tag=b1245 NC_000913.3 RefSeq CDS 1303834 1304742 . + 0 ID=cds1224;Parent=gene1267;Dbxref=ASAP:ABE-0004176,UniProtKB/Swiss-Prot:P0AFH6,Genbank:NP_415761.1,EcoGene:EG10676,GeneID:945810;Name=NP_415761.1;Note=homolog of Salmonella oligopeptide transport permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=oppC;product=oligopeptide ABC transporter permease;protein_id=NP_415761.1;transl_table=11 NC_000913.3 RefSeq gene 1304754 1305767 . + . ID=gene1268;Dbxref=EcoGene:EG10677,GeneID:945802;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;gene_synonym=ECK1240,JW1238;locus_tag=b1246 NC_000913.3 RefSeq CDS 1304754 1305767 . + 0 ID=cds1225;Parent=gene1268;Dbxref=ASAP:ABE-0004178,UniProtKB/Swiss-Prot:P76027,Genbank:YP_025300.1,EcoGene:EG10677,GeneID:945802;Name=YP_025300.1;Note=homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system;gbkey=CDS;gene=oppD;product=oligopeptide ABC transporter ATPase;protein_id=YP_025300.1;transl_table=11 NC_000913.3 RefSeq gene 1305764 1306768 . + . ID=gene1269;Dbxref=EcoGene:EG10678,GeneID:945818;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;gene_synonym=ECK1241,JW1239;locus_tag=b1247 NC_000913.3 RefSeq CDS 1305764 1306768 . + 0 ID=cds1226;Parent=gene1269;Dbxref=ASAP:ABE-0004182,UniProtKB/Swiss-Prot:P77737,Genbank:NP_415763.1,EcoGene:EG10678,GeneID:945818;Name=NP_415763.1;Note=homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system;gbkey=CDS;gene=oppF;product=oligopeptide ABC transporter ATPase;protein_id=NP_415763.1;transl_table=11 NC_000913.3 RefSeq gene 1306821 1307150 . - . ID=gene1270;Dbxref=EcoGene:EG14256,GeneID:945819;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;gene_synonym=ECK1242,JW1240;locus_tag=b1248 NC_000913.3 RefSeq CDS 1306821 1307150 . - 0 ID=cds1227;Parent=gene1270;Dbxref=ASAP:ABE-0004184,UniProtKB/Swiss-Prot:P0A8L7,Genbank:NP_415764.4,EcoGene:EG14256,GeneID:945819;Name=NP_415764.4;gbkey=CDS;gene=yciU;product=UPF0263 family protein;protein_id=NP_415764.4;transl_table=11 NC_000913.3 RefSeq gene 1307185 1308645 . - . ID=gene1271;Dbxref=EcoGene:EG11608,GeneID:945821;Name=clsA;gbkey=Gene;gene=clsA;gene_biotype=protein_coding;gene_synonym=cls,ECK1243,JW1241,nov,yciJ;locus_tag=b1249 NC_000913.3 RefSeq CDS 1307185 1308645 . - 0 ID=cds1228;Parent=gene1271;Dbxref=ASAP:ABE-0004186,UniProtKB/Swiss-Prot:P0A6H8,Genbank:NP_415765.1,EcoGene:EG11608,GeneID:945821;Name=NP_415765.1;Note=cardiolipin synthase%2C a major membrane phospholipid%3B novobiocin sensitivity;gbkey=CDS;gene=clsA;product=cardiolipin synthase 1;protein_id=NP_415765.1;transl_table=11 NC_000913.3 RefSeq gene 1308788 1308961 . + . ID=gene1272;Dbxref=EcoGene:EG14393,GeneID:5061502;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;gene_synonym=ECK4405;locus_tag=b4595 NC_000913.3 RefSeq CDS 1308788 1308961 . + 0 ID=cds1229;Parent=gene1272;Dbxref=UniProtKB/Swiss-Prot:A5A613,Genbank:YP_001165316.1,EcoGene:EG14393,GeneID:5061502;Name=YP_001165316.1;gbkey=CDS;gene=yciY;product=uncharacterized protein;protein_id=YP_001165316.1;transl_table=11 NC_000913.3 RefSeq gene 1309016 1310269 . - . ID=gene1273;Dbxref=EcoGene:EG11606,GeneID:945841;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;gene_synonym=ECK1244,JW1242;locus_tag=b1250 NC_000913.3 RefSeq CDS 1309016 1310269 . - 0 ID=cds1230;Parent=gene1273;Dbxref=ASAP:ABE-0004189,UniProtKB/Swiss-Prot:P31069,Genbank:NP_415766.1,EcoGene:EG11606,GeneID:945841;Name=NP_415766.1;Note=putative potassium channel protein (VIC family);gbkey=CDS;gene=kch;product=voltage-gated potassium channel;protein_id=NP_415766.1;transl_table=11 NC_000913.3 RefSeq gene 1310569 1310865 . - . ID=gene1274;Dbxref=EcoGene:EG11607,GeneID:949085;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;gene_synonym=ECK1245,JW1243;locus_tag=b1251 NC_000913.3 RefSeq CDS 1310569 1310865 . - 0 ID=cds1231;Parent=gene1274;Dbxref=ASAP:ABE-0004192,UniProtKB/Swiss-Prot:P0AB55,Genbank:NP_415767.2,EcoGene:EG11607,GeneID:949085;Name=NP_415767.2;gbkey=CDS;gene=yciI;product=putative DGPF domain-containing enzyme;protein_id=NP_415767.2;transl_table=11 NC_000913.3 RefSeq gene 1311089 1311808 . + . ID=gene1275;Dbxref=EcoGene:EG11012,GeneID:945843;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;gene_synonym=ECK1246,exbA,JW5195,T1rec;locus_tag=b1252 NC_000913.3 RefSeq CDS 1311089 1311808 . + 0 ID=cds1232;Parent=gene1275;Dbxref=ASAP:ABE-0004196,UniProtKB/Swiss-Prot:P02929,Genbank:NP_415768.1,EcoGene:EG11012,GeneID:945843;Name=NP_415768.1;Note=energy transducer%3B uptake of iron%2C cyanocobalimin%3B sensitivity to phages%2C colicins;gbkey=CDS;gene=tonB;product=membrane spanning protein in TonB-ExbB-ExbD transport complex;protein_id=NP_415768.1;transl_table=11 NC_000913.3 RefSeq gene 1311848 1312246 . - . ID=gene1276;Dbxref=EcoGene:EG11121,GeneID:946634;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;gene_synonym=ECK1247,JW1245;locus_tag=b1253 NC_000913.3 RefSeq CDS 1311848 1312246 . - 0 ID=cds1233;Parent=gene1276;Dbxref=ASAP:ABE-0004198,UniProtKB/Swiss-Prot:P0A8Z0,Genbank:NP_415769.1,EcoGene:EG11121,GeneID:946634;Name=NP_415769.1;gbkey=CDS;gene=yciA;product=acyl-CoA esterase;protein_id=NP_415769.1;transl_table=11 NC_000913.3 RefSeq gene 1312351 1312890 . - . ID=gene1277;Dbxref=EcoGene:EG11122,GeneID:946228;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;gene_synonym=ECK1248,ispA,ispZ,JW1246;locus_tag=b1254 NC_000913.3 RefSeq CDS 1312351 1312890 . - 0 ID=cds1234;Parent=gene1277;Dbxref=ASAP:ABE-0004200,UniProtKB/Swiss-Prot:P0A710,Genbank:NP_415770.1,EcoGene:EG11122,GeneID:946228;Name=NP_415770.1;gbkey=CDS;gene=yciB;product=IspA family inner membrane protein;protein_id=NP_415770.1;transl_table=11 NC_000913.3 RefSeq gene 1312920 1313663 . - . ID=gene1278;Dbxref=EcoGene:EG11123,GeneID:945844;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;gene_synonym=ECK1249,JW1247;locus_tag=b1255 NC_000913.3 RefSeq CDS 1312920 1313663 . - 0 ID=cds1235;Parent=gene1278;Dbxref=ASAP:ABE-0004204,UniProtKB/Swiss-Prot:P21365,Genbank:NP_415771.1,EcoGene:EG11123,GeneID:945844;Name=NP_415771.1;gbkey=CDS;gene=yciC;product=UPF0259 family inner membrane protein;protein_id=NP_415771.1;transl_table=11 NC_000913.3 RefSeq gene 1314020 1314658 . + . ID=gene1279;Dbxref=EcoGene:EG11124,GeneID:945128;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;gene_synonym=ECK1250,JW1248,yciD;locus_tag=b1256 NC_000913.3 RefSeq CDS 1314020 1314658 . + 0 ID=cds1236;Parent=gene1279;Dbxref=ASAP:ABE-0004210,UniProtKB/Swiss-Prot:P0A915,Genbank:NP_415772.1,EcoGene:EG11124,GeneID:945128;Name=NP_415772.1;Note=putative outer membrane protein;gbkey=CDS;gene=ompW;product=outer membrane protein W;protein_id=NP_415772.1;transl_table=11 NC_000913.3 RefSeq gene 1314718 1315224 . - . ID=gene1280;Dbxref=EcoGene:EG11125,GeneID:946871;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;gene_synonym=ECK1251,JW1249;locus_tag=b1257 NC_000913.3 RefSeq CDS 1314718 1315224 . - 0 ID=cds1237;Parent=gene1280;Dbxref=ASAP:ABE-0004212,UniProtKB/Swiss-Prot:P21363,Genbank:NP_415773.1,EcoGene:EG11125,GeneID:946871;Name=NP_415773.1;gbkey=CDS;gene=yciE;product=putative rubrerythrin/ferritin-like metal-binding protein;protein_id=NP_415773.1;transl_table=11 NC_000913.3 RefSeq gene 1315270 1315770 . - . ID=gene1281;Dbxref=EcoGene:EG11126,GeneID:947133;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;gene_synonym=ECK1252,JW1250;locus_tag=b1258 NC_000913.3 RefSeq CDS 1315270 1315770 . - 0 ID=cds1238;Parent=gene1281;Dbxref=ASAP:ABE-0004222,UniProtKB/Swiss-Prot:P21362,Genbank:NP_415774.1,EcoGene:EG11126,GeneID:947133;Name=NP_415774.1;Note=putative structural proteins;gbkey=CDS;gene=yciF;product=putative rubrerythrin/ferritin-like metal-binding protein;protein_id=NP_415774.1;transl_table=11 NC_000913.3 RefSeq gene 1315856 1316035 . - . ID=gene1282;Dbxref=EcoGene:EG11127,GeneID:947489;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;gene_synonym=ECK1253,JW1251;locus_tag=b1259 NC_000913.3 RefSeq CDS 1315856 1316035 . - 0 ID=cds1239;Parent=gene1282;Dbxref=ASAP:ABE-0004229,UniProtKB/Swiss-Prot:P21361,Genbank:NP_415775.4,EcoGene:EG11127,GeneID:947489;Name=NP_415775.4;gbkey=CDS;gene=yciG;product=KGG family protein;protein_id=NP_415775.4;transl_table=11 NC_000913.3 RefSeq gene 1316416 1317222 . - . ID=gene1283;Dbxref=EcoGene:EG11024,GeneID:946204;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;gene_synonym=ECK1254,JW1252,try,tryp;locus_tag=b1260 NC_000913.3 RefSeq CDS 1316416 1317222 . - 0 ID=cds1240;Parent=gene1283;Dbxref=ASAP:ABE-0004232,UniProtKB/Swiss-Prot:P0A877,Genbank:NP_415776.1,EcoGene:EG11024,GeneID:946204;Name=NP_415776.1;Note=tryptophan synthase%2C alpha protein;gbkey=CDS;gene=trpA;product=tryptophan synthase%2C alpha subunit;protein_id=NP_415776.1;transl_table=11 NC_000913.3 RefSeq gene 1317222 1318415 . - . ID=gene1284;Dbxref=EcoGene:EG11025,GeneID:945768;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;gene_synonym=ECK1255,JW1253;locus_tag=b1261 NC_000913.3 RefSeq CDS 1317222 1318415 . - 0 ID=cds1241;Parent=gene1284;Dbxref=ASAP:ABE-0004234,UniProtKB/Swiss-Prot:P0A879,Genbank:NP_415777.1,EcoGene:EG11025,GeneID:945768;Name=NP_415777.1;Note=tryptophan synthase%2C beta protein;gbkey=CDS;gene=trpB;product=tryptophan synthase%2C beta subunit;protein_id=NP_415777.1;transl_table=11 NC_000913.3 RefSeq gene 1318427 1319788 . - . ID=gene1285;Dbxref=EcoGene:EG11026,GeneID:945519;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;gene_synonym=ECK1256,JW1254,trpF;locus_tag=b1262 NC_000913.3 RefSeq CDS 1318427 1319788 . - 0 ID=cds1242;Parent=gene1285;Dbxref=ASAP:ABE-0004238,UniProtKB/Swiss-Prot:P00909,Genbank:NP_415778.3,EcoGene:EG11026,GeneID:945519;Name=NP_415778.3;Note=N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase;gbkey=CDS;gene=trpC;product=indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase;protein_id=NP_415778.3;transl_table=11 NC_000913.3 RefSeq gene 1319789 1321384 . - . ID=gene1286;Dbxref=EcoGene:EG11027,GeneID:945109;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;gene_synonym=ECK1257,JW1255,trpGD;locus_tag=b1263 NC_000913.3 RefSeq CDS 1319789 1321384 . - 0 ID=cds1243;Parent=gene1286;Dbxref=ASAP:ABE-0004241,UniProtKB/Swiss-Prot:P00904,Genbank:NP_415779.1,EcoGene:EG11027,GeneID:945109;Name=NP_415779.1;Note=anthranilate synthase component II%2C glutamine amidotransferase and phosphoribosylanthranilate transferase;gbkey=CDS;gene=trpD;product=fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase;protein_id=NP_415779.1;transl_table=11 NC_000913.3 RefSeq gene 1321384 1322946 . - . ID=gene1287;Dbxref=EcoGene:EG11028,GeneID:945846;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;gene_synonym=anth,ECK1258,JW1256,tryD,tryp-4;locus_tag=b1264 NC_000913.3 RefSeq CDS 1321384 1322946 . - 0 ID=cds1244;Parent=gene1287;Dbxref=ASAP:ABE-0004244,UniProtKB/Swiss-Prot:P00895,Genbank:NP_415780.1,EcoGene:EG11028,GeneID:945846;Name=NP_415780.1;Note=anthranilate synthase component I;gbkey=CDS;gene=trpE;product=component I of anthranilate synthase;protein_id=NP_415780.1;transl_table=11 NC_000913.3 RefSeq gene 1323038 1323082 . - . ID=gene1288;Dbxref=EcoGene:EG11274,GeneID:945856;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;gene_synonym=ECK1259,JW1257,trpEE;locus_tag=b1265 NC_000913.3 RefSeq CDS 1323038 1323082 . - 0 ID=cds1245;Parent=gene1288;Dbxref=ASAP:ABE-0004246,UniProtKB/Swiss-Prot:P0AD92,Genbank:NP_415781.1,EcoGene:EG11274,GeneID:945856;Name=NP_415781.1;gbkey=CDS;gene=trpL;product=trp operon leader peptide;protein_id=NP_415781.1;transl_table=11 NC_000913.3 RefSeq gene 1323220 1324101 . + . ID=gene1289;Dbxref=EcoGene:EG14257,GeneID:945857;Name=yciV;gbkey=Gene;gene=yciV;gene_biotype=protein_coding;gene_synonym=ECK1260,JW1258,trpH;locus_tag=b1266 NC_000913.3 RefSeq CDS 1323220 1324101 . + 0 ID=cds1246;Parent=gene1289;Dbxref=ASAP:ABE-0004252,UniProtKB/Swiss-Prot:P77766,Genbank:NP_415782.1,EcoGene:EG14257,GeneID:945857;Name=NP_415782.1;Note=putative enzymes;gbkey=CDS;gene=yciV;product=PHP domain protein;protein_id=NP_415782.1;transl_table=11 NC_000913.3 RefSeq gene 1324098 1324718 . + . ID=gene1290;Dbxref=EcoGene:EG12967,GeneID:945854;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;gene_synonym=ECK1261,JW5196;locus_tag=b1267 NC_000913.3 RefSeq CDS 1324098 1324718 . + 0 ID=cds1247;Parent=gene1290;Dbxref=ASAP:ABE-0004254,UniProtKB/Swiss-Prot:P0AFR4,Genbank:NP_415783.6,EcoGene:EG12967,GeneID:945854;Name=NP_415783.6;gbkey=CDS;gene=yciO;product=putative RNA binding protein;protein_id=NP_415783.6;transl_table=11 NC_000913.3 RefSeq gene 1324746 1326641 . + . ID=gene1291;Dbxref=EcoGene:EG12969,GeneID:945850;Name=yciQ;gbkey=Gene;gene=yciQ;gene_biotype=protein_coding;gene_synonym=ECK1262,JW5197,yciP;locus_tag=b1268 NC_000913.3 RefSeq CDS 1324746 1326641 . + 0 ID=cds1248;Parent=gene1291;Dbxref=ASAP:ABE-0004256,UniProtKB/Swiss-Prot:P45848,Genbank:NP_415784.1,EcoGene:EG12969,GeneID:945850;Name=NP_415784.1;gbkey=CDS;gene=yciQ;product=enhancer of membrane protein expression%3B putative inner membrane protein;protein_id=NP_415784.1;transl_table=11 NC_000913.3 RefSeq gene 1326852 1327727 . + . ID=gene1292;Dbxref=EcoGene:EG12433,GeneID:945840;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;gene_synonym=ECK1263,JW1261,yciL;locus_tag=b1269 NC_000913.3 RefSeq CDS 1326852 1327727 . + 0 ID=cds1249;Parent=gene1292;Dbxref=ASAP:ABE-0004259,UniProtKB/Swiss-Prot:P37765,Genbank:NP_415785.1,EcoGene:EG12433,GeneID:945840;Name=NP_415785.1;gbkey=CDS;gene=rluB;product=23S rRNA pseudouridine(2605) synthase;protein_id=NP_415785.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1327737 1327755 . + . ID=id176;Note=REP109 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1327767 1328357 . - . ID=gene1293;Dbxref=EcoGene:EG10130,GeneID:945839;Name=btuR;gbkey=Gene;gene=btuR;gene_biotype=protein_coding;gene_synonym=cobA,ECK1264,JW1262;locus_tag=b1270 NC_000913.3 RefSeq CDS 1327767 1328357 . - 0 ID=cds1250;Parent=gene1293;Dbxref=ASAP:ABE-0004261,UniProtKB/Swiss-Prot:P0A9H5,Genbank:NP_415786.1,EcoGene:EG10130,GeneID:945839;Name=NP_415786.1;Note=cob(I)alamin adenolsyltransferase;gbkey=CDS;gene=btuR;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=NP_415786.1;transl_table=11 NC_000913.3 RefSeq gene 1328354 1329112 . - . ID=gene1294;Dbxref=EcoGene:EG11759,GeneID:945838;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;gene_synonym=ECK1265,JW1263;locus_tag=b1271 NC_000913.3 RefSeq CDS 1328354 1329112 . - 0 ID=cds1251;Parent=gene1294;Dbxref=ASAP:ABE-0004263,UniProtKB/Swiss-Prot:P31808,Genbank:NP_415787.1,EcoGene:EG11759,GeneID:945838;Name=NP_415787.1;Note=putative oxidoreductase;gbkey=CDS;gene=yciK;product=putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase;protein_id=NP_415787.1;transl_table=11 NC_000913.3 RefSeq gene 1329332 1330381 . + . ID=gene1295;Dbxref=EcoGene:EG10956,GeneID:945858;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;gene_synonym=ECK1266,JW1264;locus_tag=b1272 NC_000913.3 RefSeq CDS 1329332 1330381 . + 0 ID=cds1252;Parent=gene1295;Dbxref=ASAP:ABE-0004267,UniProtKB/Swiss-Prot:P0AG14,Genbank:NP_415788.1,EcoGene:EG10956,GeneID:945858;Name=NP_415788.1;Note=putative protease;gbkey=CDS;gene=sohB;product=inner membrane protein%2C S49 peptidase family protein;protein_id=NP_415788.1;transl_table=11 NC_000913.3 RefSeq gene 1330417 1330668 . - . ID=gene1296;Dbxref=EcoGene:EG12868,GeneID:945860;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;gene_synonym=ECK1267,JW1265;locus_tag=b1273 NC_000913.3 RefSeq CDS 1330417 1330668 . - 0 ID=cds1253;Parent=gene1296;Dbxref=ASAP:ABE-0004269,UniProtKB/Swiss-Prot:P0AB61,Genbank:NP_415789.1,EcoGene:EG12868,GeneID:945860;Name=NP_415789.1;gbkey=CDS;gene=yciN;product=DUF2498 protein YciN;protein_id=NP_415789.1;transl_table=11 NC_000913.3 RefSeq gene 1331048 1333645 . + . ID=gene1297;Dbxref=EcoGene:EG11013,GeneID:945862;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;gene_synonym=asuA?,ECK1268,JW1266,supX;locus_tag=b1274 NC_000913.3 RefSeq CDS 1331048 1333645 . + 0 ID=cds1254;Parent=gene1297;Dbxref=ASAP:ABE-0004275,UniProtKB/Swiss-Prot:P06612,Genbank:NP_415790.1,EcoGene:EG11013,GeneID:945862;Name=NP_415790.1;Note=DNA topoisomerase type I%2C omega protein;gbkey=CDS;gene=topA;product=DNA topoisomerase I%2C omega subunit;protein_id=NP_415790.1;transl_table=11 NC_000913.3 RefSeq gene 1333855 1334829 . + . ID=gene1298;Dbxref=EcoGene:EG10184,GeneID:945771;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;gene_synonym=ECK1269,JW1267;locus_tag=b1275 NC_000913.3 RefSeq CDS 1333855 1334829 . + 0 ID=cds1255;Parent=gene1298;Dbxref=ASAP:ABE-0004279,UniProtKB/Swiss-Prot:P0A9F3,Genbank:NP_415791.1,EcoGene:EG10184,GeneID:945771;Name=NP_415791.1;Note=positive transcriptional regulator for cysteine regulon;gbkey=CDS;gene=cysB;product=N-acetylserine-responsive cysteine regulon transcriptional activator%3B autorepressor;protein_id=NP_415791.1;transl_table=11 NC_000913.3 RefSeq gene 1335124 1335288 . + . ID=gene1299;Dbxref=EcoGene:EG14463,GeneID:1450256;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;gene_synonym=ECK4433;locus_tag=b4522 NC_000913.3 RefSeq CDS 1335124 1335288 . + 0 ID=cds1256;Parent=gene1299;Dbxref=UniProtKB/Swiss-Prot:P0CB62,Genbank:YP_588449.2,EcoGene:EG14463,GeneID:1450256;Name=YP_588449.2;gbkey=CDS;gene=ymiA;product=uncharacterized protein;protein_id=YP_588449.2;transl_table=11 NC_000913.3 RefSeq gene 1335291 1335458 . + . ID=gene1300;Dbxref=EcoGene:EG14351,GeneID:1450257;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;gene_synonym=ECK1270,JW5198,JW5199;locus_tag=b4523 NC_000913.3 RefSeq CDS 1335291 1335458 . + 0 ID=cds1257;Parent=gene1300;Dbxref=ASAP:ABE-0285043,ASAP:ABE-0285044,ASAP:ABE-0285107,UniProtKB/Swiss-Prot:P58094,Genbank:YP_588450.2,EcoGene:EG14351,GeneID:1450257;Name=YP_588450.2;gbkey=CDS;gene=yciX;product=uncharacterized protein;protein_id=YP_588450.2;transl_table=11 NC_000913.3 RefSeq gene 1335831 1338506 . + . ID=gene1301;Dbxref=EcoGene:EG11325,GeneID:946724;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;gene_synonym=acn,ECK1271,JW1268;locus_tag=b1276 NC_000913.3 RefSeq CDS 1335831 1338506 . + 0 ID=cds1258;Parent=gene1301;Dbxref=ASAP:ABE-0004283,UniProtKB/Swiss-Prot:P25516,Genbank:NP_415792.1,EcoGene:EG11325,GeneID:946724;Name=NP_415792.1;Note=aconitate hydrase 1;gbkey=CDS;gene=acnA;product=aconitate hydratase 1%3B aconitase A;protein_id=NP_415792.1;transl_table=11 NC_000913.3 RefSeq gene 1338570 1339160 . - . ID=gene1302;Dbxref=EcoGene:EG11331,GeneID:945763;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;gene_synonym=ECK1272,JW1269;locus_tag=b1277 NC_000913.3 RefSeq CDS 1338570 1339160 . - 0 ID=cds1259;Parent=gene1302;Dbxref=ASAP:ABE-0004285,UniProtKB/Swiss-Prot:P0A7I7,Genbank:NP_415793.1,EcoGene:EG11331,GeneID:945763;Name=NP_415793.1;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase II;protein_id=NP_415793.1;transl_table=11 NC_000913.3 RefSeq gene 1339330 1340094 . + . ID=gene1303;Dbxref=EcoGene:EG10705,GeneID:945863;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;gene_synonym=ECK1273,JW1270;locus_tag=b1278 NC_000913.3 RefSeq CDS 1339330 1340094 . + 0 ID=cds1260;Parent=gene1303;Dbxref=ASAP:ABE-0004294,UniProtKB/Swiss-Prot:P0A924,Genbank:NP_415794.1,EcoGene:EG10705,GeneID:945863;Name=NP_415794.1;Note=non-essential phosphatidylglycerophosphate phosphatase%2C membrane bound;gbkey=CDS;gene=pgpB;product=phosphatidylglycerophosphatase B;protein_id=NP_415794.1;transl_table=11 NC_000913.3 RefSeq gene 1340243 1340551 . + . ID=gene1304;Dbxref=EcoGene:EG13904,GeneID:944936;Name=yciS;gbkey=Gene;gene=yciS;gene_biotype=protein_coding;gene_synonym=ECK1274,JW1271,lapA;locus_tag=b1279 NC_000913.3 RefSeq CDS 1340243 1340551 . + 0 ID=cds1261;Parent=gene1304;Dbxref=ASAP:ABE-0004298,UniProtKB/Swiss-Prot:P0ACV4,Genbank:NP_415795.1,EcoGene:EG13904,GeneID:944936;Name=NP_415795.1;gbkey=CDS;gene=yciS;product=DUF1049 family inner membrane protein%2C function unknown;protein_id=NP_415795.1;transl_table=11 NC_000913.3 RefSeq gene 1340558 1341727 . + . ID=gene1305;Dbxref=EcoGene:EG12691,GeneID:944858;Name=yciM;gbkey=Gene;gene=yciM;gene_biotype=protein_coding;gene_synonym=ECK1275,JW1272,lapB;locus_tag=b1280 NC_000913.3 RefSeq CDS 1340558 1341727 . + 0 ID=cds1262;Parent=gene1305;Dbxref=ASAP:ABE-0004300,UniProtKB/Swiss-Prot:P0AB58,Genbank:NP_415796.1,EcoGene:EG12691,GeneID:944858;Name=NP_415796.1;Note=putative heat shock protein;gbkey=CDS;gene=yciM;product=LPS regulatory protein%3B putative modulator of LpxC proteolysis;protein_id=NP_415796.1;transl_table=11 NC_000913.3 RefSeq gene 1341921 1342658 . + . ID=gene1306;Dbxref=EcoGene:EG10809,GeneID:947121;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;gene_synonym=ECK1276,JW1273;locus_tag=b1281 NC_000913.3 RefSeq CDS 1341921 1342658 . + 0 ID=cds1263;Parent=gene1306;Dbxref=ASAP:ABE-0004304,UniProtKB/Swiss-Prot:P08244,Genbank:NP_415797.1,EcoGene:EG10809,GeneID:947121;Name=NP_415797.1;gbkey=CDS;gene=pyrF;product=orotidine-5'-phosphate decarboxylase;protein_id=NP_415797.1;transl_table=11 NC_000913.3 RefSeq gene 1342658 1342984 . + . ID=gene1307;Dbxref=EcoGene:EG11128,GeneID:947058;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;gene_synonym=ECK1277,JW1274;locus_tag=b1282 NC_000913.3 RefSeq CDS 1342658 1342984 . + 0 ID=cds1264;Parent=gene1307;Dbxref=ASAP:ABE-0004307,UniProtKB/Swiss-Prot:P08245,Genbank:NP_415798.2,EcoGene:EG11128,GeneID:947058;Name=NP_415798.2;gbkey=CDS;gene=yciH;product=initiation factor function partial mimic%2C SUI1 family;protein_id=NP_415798.2;transl_table=11 NC_000913.3 RefSeq gene 1343110 1343328 . - . ID=gene1308;Dbxref=EcoGene:EG10679,GeneID:945866;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;gene_synonym=ECK1278,JW1275;locus_tag=b1283 NC_000913.3 RefSeq CDS 1343110 1343328 . - 0 ID=cds1265;Parent=gene1308;Dbxref=ASAP:ABE-0004309,UniProtKB/Swiss-Prot:P0ADA7,Genbank:NP_415799.1,EcoGene:EG10679,GeneID:945866;Name=NP_415799.1;Note=osmotically inducible lipoprotein;gbkey=CDS;gene=osmB;product=osmotically and stress inducible lipoprotein;protein_id=NP_415799.1;transl_table=11 NC_000913.3 RefSeq gene 1343597 1344346 . - . ID=gene1309;Dbxref=EcoGene:EG13905,GeneID:945869;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT,ECK1279,JW1276;locus_tag=b1284 NC_000913.3 RefSeq CDS 1343597 1344346 . - 0 ID=cds1266;Parent=gene1309;Dbxref=ASAP:ABE-0004312,UniProtKB/Swiss-Prot:P76034,Genbank:NP_415800.1,EcoGene:EG13905,GeneID:945869;Name=NP_415800.1;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=yciT;product=global regulator of transcription%3B DeoR family;protein_id=NP_415800.1;transl_table=11 NC_000913.3 RefSeq gene 1344436 1344609 . - . ID=gene1310;Dbxref=EcoGene:EG14460,GeneID:5061509;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;gene_synonym=deoL,ECK4406;locus_tag=b4596 NC_000913.3 RefSeq CDS 1344436 1344609 . - 0 ID=cds1267;Parent=gene1310;Dbxref=UniProtKB/Swiss-Prot:A5A614,Genbank:YP_001165317.1,EcoGene:EG14460,GeneID:5061509;Name=YP_001165317.1;gbkey=CDS;gene=yciZ;product=uncharacterized protein;protein_id=YP_001165317.1;transl_table=11 NC_000913.3 RefSeq gene 1344757 1346742 . - . ID=gene1311;Dbxref=EcoGene:EG13415,GeneID:945868;Name=gmr;gbkey=Gene;gene=gmr;gene_biotype=protein_coding;gene_synonym=ECK1280,JW1278,yciR;locus_tag=b1285 NC_000913.3 RefSeq CDS 1344757 1346742 . - 0 ID=cds1268;Parent=gene1311;Dbxref=ASAP:ABE-0004317,UniProtKB/Swiss-Prot:P77334,Genbank:NP_415801.1,EcoGene:EG13415,GeneID:945868;Name=NP_415801.1;gbkey=CDS;gene=gmr;product=cyclic-di-GMP phosphodiesterase%3B csgD regulator%3B modulator of RNase II stability;protein_id=NP_415801.1;transl_table=11 NC_000913.3 RefSeq gene 1346796 1346900 . + . ID=gene1312;Dbxref=EcoGene:EG14477,GeneID:7751616;Name=ymiB;gbkey=Gene;gene=ymiB;gene_biotype=protein_coding;gene_synonym=ECK4487;locus_tag=b4672 NC_000913.3 RefSeq CDS 1346796 1346900 . + 0 ID=cds1269;Parent=gene1312;Dbxref=UniProtKB/Swiss-Prot:C1P5Z9,Genbank:YP_002791239.1,EcoGene:EG14477,GeneID:7751616;Name=YP_002791239.1;gbkey=CDS;gene=ymiB;product=uncharacterized protein;protein_id=YP_002791239.1;transl_table=11 NC_000913.3 RefSeq gene 1346978 1348912 . - . ID=gene1313;Dbxref=EcoGene:EG11620,GeneID:945864;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;gene_synonym=ECK1281,JW1279;locus_tag=b1286 NC_000913.3 RefSeq CDS 1346978 1348912 . - 0 ID=cds1270;Parent=gene1313;Dbxref=ASAP:ABE-0004320,UniProtKB/Swiss-Prot:P30850,Genbank:NP_415802.1,EcoGene:EG11620,GeneID:945864;Name=NP_415802.1;Note=RNase II%2C mRNA degradation;gbkey=CDS;gene=rnb;product=ribonuclease II;protein_id=NP_415802.1;transl_table=11 NC_000913.3 RefSeq gene 1348980 1350107 . - . ID=gene1314;Dbxref=EcoGene:EG14262,GeneID:945859;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;gene_synonym=ECK1282,JW5200;locus_tag=b1287 NC_000913.3 RefSeq CDS 1348980 1350107 . - 0 ID=cds1271;Parent=gene1314;Dbxref=ASAP:ABE-0004322,UniProtKB/Swiss-Prot:P76035,Genbank:NP_415803.2,EcoGene:EG14262,GeneID:945859;Name=NP_415803.2;Note=putative oxidoreductase;gbkey=CDS;gene=yciW;product=putative oxidoreductase;protein_id=NP_415803.2;transl_table=11 NC_000913.3 RefSeq gene 1350251 1351039 . - . ID=gene1315;Dbxref=EcoGene:EG11528,GeneID:945870;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;gene_synonym=ECK1283,envM,gts,JW1281,qmeA;locus_tag=b1288 NC_000913.3 RefSeq CDS 1350251 1351039 . - 0 ID=cds1272;Parent=gene1315;Dbxref=ASAP:ABE-0004327,UniProtKB/Swiss-Prot:P0AEK4,Genbank:NP_415804.1,EcoGene:EG11528,GeneID:945870;Name=NP_415804.1;Note=enoyl-[acyl-carrier-protein] reductase (NADH);gbkey=CDS;gene=fabI;product=enoyl-[acyl-carrier-protein] reductase%2C NADH-dependent;protein_id=NP_415804.1;transl_table=11 NC_000913.3 RefSeq gene 1351407 1351760 . - . ID=gene1316;Dbxref=EcoGene:EG12653,GeneID:945871;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;gene_synonym=ECK1284,JW1282;locus_tag=b1289 NC_000913.3 RefSeq CDS 1351407 1351760 . - 0 ID=cds1273;Parent=gene1316;Dbxref=ASAP:ABE-0004333,UniProtKB/Swiss-Prot:P45736,Genbank:NP_415805.1,EcoGene:EG12653,GeneID:945871;Name=NP_415805.1;gbkey=CDS;gene=ycjD;product=DUF559 family endonuclease-related protein;protein_id=NP_415805.1;transl_table=11 NC_000913.3 RefSeq gene 1351828 1352634 . - . ID=gene1317;Dbxref=EcoGene:EG12305,GeneID:945335;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;gene_synonym=ECK1285,JW1283;locus_tag=b1290 NC_000913.3 RefSeq CDS 1351828 1352634 . - 0 ID=cds1274;Parent=gene1317;Dbxref=ASAP:ABE-0004339,UniProtKB/Swiss-Prot:P0AAH8,Genbank:NP_415806.1,EcoGene:EG12305,GeneID:945335;Name=NP_415806.1;Note=putative ATP-binding protein of peptide transport system;gbkey=CDS;gene=sapF;product=antimicrobial peptide ABC transporter ATPase;protein_id=NP_415806.1;transl_table=11 NC_000913.3 RefSeq gene 1352636 1353628 . - . ID=gene1318;Dbxref=EcoGene:EG12304,GeneID:946203;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;gene_synonym=ECK1286,JW1284,trkE;locus_tag=b1291 NC_000913.3 RefSeq CDS 1352636 1353628 . - 0 ID=cds1275;Parent=gene1318;Dbxref=ASAP:ABE-0004342,UniProtKB/Swiss-Prot:P0AAH4,Genbank:NP_415807.1,EcoGene:EG12304,GeneID:946203;Name=NP_415807.1;Note=putative ATP-binding protein of peptide transport system;gbkey=CDS;gene=sapD;product=antimicrobial peptide ABC transporter ATPase;protein_id=NP_415807.1;transl_table=11 NC_000913.3 RefSeq gene 1353628 1354518 . - . ID=gene1319;Dbxref=EcoGene:EG20256,GeneID:945266;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;gene_synonym=ECK1287,JW1285;locus_tag=b1292 NC_000913.3 RefSeq CDS 1353628 1354518 . - 0 ID=cds1276;Parent=gene1319;Dbxref=ASAP:ABE-0004348,UniProtKB/Swiss-Prot:P0AGH5,Genbank:NP_415808.1,EcoGene:EG20256,GeneID:945266;Name=NP_415808.1;Note=homolog of Salmonella peptide transport permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=sapC;product=antimicrobial peptide transport ABC transporter permease;protein_id=NP_415808.1;transl_table=11 NC_000913.3 RefSeq gene 1354505 1355470 . - . ID=gene1320;Dbxref=EcoGene:EG20255,GeneID:946191;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;gene_synonym=ECK1288,JW1286;locus_tag=b1293 NC_000913.3 RefSeq CDS 1354505 1355470 . - 0 ID=cds1277;Parent=gene1320;Dbxref=ASAP:ABE-0004350,UniProtKB/Swiss-Prot:P0AGH3,Genbank:NP_415809.1,EcoGene:EG20255,GeneID:946191;Name=NP_415809.1;Note=homolog of Salmonella peptide transport permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=sapB;product=antimicrobial peptide transport ABC transporter permease;protein_id=NP_415809.1;transl_table=11 NC_000913.3 RefSeq gene 1355467 1357110 . - . ID=gene1321;Dbxref=EcoGene:EG20254,GeneID:945873;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;gene_synonym=ECK1289,JW1287;locus_tag=b1294 NC_000913.3 RefSeq CDS 1355467 1357110 . - 0 ID=cds1278;Parent=gene1321;Dbxref=ASAP:ABE-0004354,UniProtKB/Swiss-Prot:Q47622,Genbank:NP_415810.1,EcoGene:EG20254,GeneID:945873;Name=NP_415810.1;Note=homolog of Salmonella peptide transport periplasmic protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=sapA;product=antimicrobial peptide transport ABC transporter periplasmic binding protein;protein_id=NP_415810.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1357359 1357392 . + . ID=id177;Note=REP110 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1357423 1357668 . - . ID=gene1322;Dbxref=EcoGene:EG14295,GeneID:945874;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;gene_synonym=ECK1290,JW1288;locus_tag=b1295 NC_000913.3 RefSeq CDS 1357423 1357668 . - 0 ID=cds1279;Parent=gene1322;Dbxref=ASAP:ABE-0004359,UniProtKB/Swiss-Prot:P0ACV8,Genbank:NP_415811.1,EcoGene:EG14295,GeneID:945874;Name=NP_415811.1;gbkey=CDS;gene=ymjA;product=DUF2543 family protein;protein_id=NP_415811.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1357770 1357799 . + . ID=id178;Note=REP111 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1357802 1359187 . - . ID=gene1323;Dbxref=EcoGene:EG13907,GeneID:946287;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;gene_synonym=ECK1291,JW1289,ycjJ;locus_tag=b1296 NC_000913.3 RefSeq CDS 1357802 1359187 . - 0 ID=cds1280;Parent=gene1323;Dbxref=ASAP:ABE-0004362,UniProtKB/Swiss-Prot:P76037,Genbank:NP_415812.4,EcoGene:EG13907,GeneID:946287;Name=NP_415812.4;Note=putative amino acid/amine transport protein;gbkey=CDS;gene=puuP;product=putrescine importer;protein_id=NP_415812.4;transl_table=11 NC_000913.3 RefSeq gene 1359490 1360908 . - . ID=gene1324;Dbxref=EcoGene:EG13908,GeneID:946202;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;gene_synonym=ECK1292,JW5201,ycjK;locus_tag=b1297 NC_000913.3 RefSeq CDS 1359490 1360908 . - 0 ID=cds1281;Parent=gene1324;Dbxref=ASAP:ABE-0004365,UniProtKB/Swiss-Prot:P78061,Genbank:NP_415813.4,EcoGene:EG13908,GeneID:946202;Name=NP_415813.4;Note=putative glutamine synthetase;gbkey=CDS;gene=puuA;product=glutamate--putrescine ligase;protein_id=NP_415813.4;transl_table=11 NC_000913.3 RefSeq gene 1361120 1361884 . + . ID=gene1325;Dbxref=EcoGene:EG13909,GeneID:945882;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;gene_synonym=ECK1293,JW1291,ycjL;locus_tag=b1298 NC_000913.3 RefSeq CDS 1361120 1361884 . + 0 ID=cds1282;Parent=gene1325;Dbxref=ASAP:ABE-0004369,UniProtKB/Swiss-Prot:P76038,Genbank:NP_415814.4,EcoGene:EG13909,GeneID:945882;Name=NP_415814.4;Note=probable amidotransferase subunit;gbkey=CDS;gene=puuD;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=NP_415814.4;transl_table=11 NC_000913.3 RefSeq gene 1361911 1362468 . + . ID=gene1326;Dbxref=EcoGene:EG12431,GeneID:945886;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;gene_synonym=ECK1294,JW1292,ycjC;locus_tag=b1299 NC_000913.3 RefSeq CDS 1361911 1362468 . + 0 ID=cds1283;Parent=gene1326;Dbxref=ASAP:ABE-0004371,UniProtKB/Swiss-Prot:P0A9U6,Genbank:NP_415815.1,EcoGene:EG12431,GeneID:945886;Name=NP_415815.1;gbkey=CDS;gene=puuR;product=repressor for the divergent puu operons%2C putrescine inducible;protein_id=NP_415815.1;transl_table=11 NC_000913.3 RefSeq gene 1362743 1364230 . + . ID=gene1327;Dbxref=EcoGene:EG10036,GeneID:947003;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;gene_synonym=aldH,ECK1295,JW1293;locus_tag=b1300 NC_000913.3 RefSeq CDS 1362743 1364230 . + 0 ID=cds1284;Parent=gene1327;Dbxref=ASAP:ABE-0004376,UniProtKB/Swiss-Prot:P23883,Genbank:NP_415816.1,EcoGene:EG10036,GeneID:947003;Name=NP_415816.1;Note=aldehyde dehydrogenase%2C prefers NADP over NAD;gbkey=CDS;gene=puuC;product=gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase%3B succinate semialdehyde dehydrogenase;protein_id=NP_415816.1;transl_table=11 NC_000913.3 RefSeq gene 1364232 1365512 . + . ID=gene1328;Dbxref=EcoGene:EG11822,GeneID:945072;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;gene_synonym=ECK1296,JW1294,ordL,ycjA;locus_tag=b1301 NC_000913.3 RefSeq CDS 1364232 1365512 . + 0 ID=cds1285;Parent=gene1328;Dbxref=ASAP:ABE-0004378,UniProtKB/Swiss-Prot:P37906,Genbank:NP_415817.1,EcoGene:EG11822,GeneID:945072;Name=NP_415817.1;Note=probable oxidoreductase;gbkey=CDS;gene=puuB;product=gamma-glutamylputrescine oxidoreductase;protein_id=NP_415817.1;transl_table=11 NC_000913.3 RefSeq gene 1365550 1366815 . + . ID=gene1329;Dbxref=EcoGene:EG13187,GeneID:945446;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;gene_synonym=ECK1297,goaG,JW1295;locus_tag=b1302 NC_000913.3 RefSeq CDS 1365550 1366815 . + 0 ID=cds1286;Parent=gene1329;Dbxref=ASAP:ABE-0004380,UniProtKB/Swiss-Prot:P50457,Genbank:NP_415818.1,EcoGene:EG13187,GeneID:945446;Name=NP_415818.1;Note=4-aminobutyrate aminotransferase;gbkey=CDS;gene=puuE;product=4-aminobutyrate aminotransferase%2C PLP-dependent;protein_id=NP_415818.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1366833 1366913 . + . ID=id179;Note=RIP112 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1366935 1367912 . - . ID=gene1330;Dbxref=EcoGene:EG12344,GeneID:945683;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;gene_synonym=ECK1298,JW1296,ycjB;locus_tag=b1303 NC_000913.3 RefSeq CDS 1366935 1367912 . - 0 ID=cds1287;Parent=gene1330;Dbxref=ASAP:ABE-0004383,UniProtKB/Swiss-Prot:P37344,Genbank:NP_415819.4,EcoGene:EG12344,GeneID:945683;Name=NP_415819.4;Note=psp operon transcriptional activator;gbkey=CDS;gene=pspF;product=psp operon transcriptional activator;protein_id=NP_415819.4;transl_table=11 NC_000913.3 RefSeq gene 1368079 1368747 . + . ID=gene1331;Dbxref=EcoGene:EG10776,GeneID:945887;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;gene_synonym=cog,ECK1299,JW1297;locus_tag=b1304 NC_000913.3 RefSeq CDS 1368079 1368747 . + 0 ID=cds1288;Parent=gene1331;Dbxref=ASAP:ABE-0004387,UniProtKB/Swiss-Prot:P0AFM6,Genbank:NP_415820.1,EcoGene:EG10776,GeneID:945887;Name=NP_415820.1;Note=phage shock protein%2C inner membrane protein;gbkey=CDS;gene=pspA;product=regulatory protein for phage-shock-protein operon;protein_id=NP_415820.1;transl_table=11 NC_000913.3 RefSeq gene 1368801 1369025 . + . ID=gene1332;Dbxref=EcoGene:EG10777,GeneID:945893;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;gene_synonym=ECK1300,JW1298;locus_tag=b1305 NC_000913.3 RefSeq CDS 1368801 1369025 . + 0 ID=cds1289;Parent=gene1332;Dbxref=ASAP:ABE-0004389,UniProtKB/Swiss-Prot:P0AFM9,Genbank:NP_415821.1,EcoGene:EG10777,GeneID:945893;Name=NP_415821.1;Note=phage shock protein;gbkey=CDS;gene=pspB;product=psp operon transcription co-activator;protein_id=NP_415821.1;transl_table=11 NC_000913.3 RefSeq gene 1369025 1369384 . + . ID=gene1333;Dbxref=EcoGene:EG10778,GeneID:945499;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;gene_synonym=ECK1301,JW1299;locus_tag=b1306 NC_000913.3 RefSeq CDS 1369025 1369384 . + 0 ID=cds1290;Parent=gene1333;Dbxref=ASAP:ABE-0004391,UniProtKB/Swiss-Prot:P0AFN2,Genbank:NP_415822.1,EcoGene:EG10778,GeneID:945499;Name=NP_415822.1;Note=phage shock protein: activates phage shock-protein expression;gbkey=CDS;gene=pspC;product=psp operon transcription co-activator;protein_id=NP_415822.1;transl_table=11 NC_000913.3 RefSeq gene 1369393 1369614 . + . ID=gene1334;Dbxref=EcoGene:EG10779,GeneID:945635;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;gene_synonym=ECK1302,JW1300;locus_tag=b1307 NC_000913.3 RefSeq CDS 1369393 1369614 . + 0 ID=cds1291;Parent=gene1334;Dbxref=ASAP:ABE-0004394,UniProtKB/Swiss-Prot:P0AFV8,Genbank:NP_415823.1,EcoGene:EG10779,GeneID:945635;Name=NP_415823.1;Note=phage shock protein;gbkey=CDS;gene=pspD;product=peripheral inner membrane phage-shock protein;protein_id=NP_415823.1;transl_table=11 NC_000913.3 RefSeq gene 1369689 1370003 . + . ID=gene1335;Dbxref=EcoGene:EG10780,GeneID:945652;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;gene_synonym=ECK1303,JW1301;locus_tag=b1308 NC_000913.3 RefSeq CDS 1369689 1370003 . + 0 ID=cds1292;Parent=gene1335;Dbxref=ASAP:ABE-0004397,UniProtKB/Swiss-Prot:P23857,Genbank:NP_415824.1,EcoGene:EG10780,GeneID:945652;Name=NP_415824.1;Note=phage shock protein;gbkey=CDS;gene=pspE;product=thiosulfate:cyanide sulfurtransferase (rhodanese);protein_id=NP_415824.1;transl_table=11 NC_000913.3 RefSeq gene 1370216 1371895 . + . ID=gene1336;Dbxref=EcoGene:EG13910,GeneID:945659;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;gene_synonym=ECK1304,JW1302;locus_tag=b1309 NC_000913.3 RefSeq CDS 1370216 1371895 . + 0 ID=cds1293;Parent=gene1336;Dbxref=ASAP:ABE-0004400,UniProtKB/Swiss-Prot:P76041,Genbank:NP_415825.4,EcoGene:EG13910,GeneID:945659;Name=NP_415825.4;Note=putative polysaccharide hydrolase;gbkey=CDS;gene=ycjM;product=alpha amylase catalytic domain family protein;protein_id=NP_415825.4;transl_table=11 NC_000913.3 RefSeq gene 1371909 1373201 . + . ID=gene1337;Dbxref=EcoGene:EG13911,GeneID:945696;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;gene_synonym=ECK1305,JW1303;locus_tag=b1310 NC_000913.3 RefSeq CDS 1371909 1373201 . + 0 ID=cds1294;Parent=gene1337;Dbxref=ASAP:ABE-0004402,UniProtKB/Swiss-Prot:P76042,Genbank:NP_415826.1,EcoGene:EG13911,GeneID:945696;Name=NP_415826.1;gbkey=CDS;gene=ycjN;product=putative ABC sugar transporter periplasmic binding protein;protein_id=NP_415826.1;transl_table=11 NC_000913.3 RefSeq gene 1373222 1374103 . + . ID=gene1338;Dbxref=EcoGene:EG13912,GeneID:945888;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;gene_synonym=ECK1306,JW1304;locus_tag=b1311 NC_000913.3 RefSeq CDS 1373222 1374103 . + 0 ID=cds1295;Parent=gene1338;Dbxref=ASAP:ABE-0004405,UniProtKB/Swiss-Prot:P0AFR7,Genbank:NP_415827.1,EcoGene:EG13912,GeneID:945888;Name=NP_415827.1;Note=putative binding-protein dependent transport protein;gbkey=CDS;gene=ycjO;product=putative sugar ABC transporter permease;protein_id=NP_415827.1;transl_table=11 NC_000913.3 RefSeq gene 1374090 1374932 . + . ID=gene1339;Dbxref=EcoGene:EG13913,GeneID:945892;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;gene_synonym=ECK1307,JW1305;locus_tag=b1312 NC_000913.3 RefSeq CDS 1374090 1374932 . + 0 ID=cds1296;Parent=gene1339;Dbxref=ASAP:ABE-0004409,UniProtKB/Swiss-Prot:P77716,Genbank:NP_415828.1,EcoGene:EG13913,GeneID:945892;Name=NP_415828.1;Note=putative transport system permease protein;gbkey=CDS;gene=ycjP;product=putative sugar ABC transporter permease;protein_id=NP_415828.1;transl_table=11 NC_000913.3 RefSeq gene 1374963 1376015 . + . ID=gene1340;Dbxref=EcoGene:EG13914,GeneID:945971;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;gene_synonym=ECK1308,JW1306;locus_tag=b1313 NC_000913.3 RefSeq CDS 1374963 1376015 . + 0 ID=cds1297;Parent=gene1340;Dbxref=ASAP:ABE-0004412,UniProtKB/Swiss-Prot:P76043,Genbank:NP_415829.1,EcoGene:EG13914,GeneID:945971;Name=NP_415829.1;Note=putative oxidoreductase;gbkey=CDS;gene=ycjQ;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=NP_415829.1;transl_table=11 NC_000913.3 RefSeq gene 1376034 1376822 . + . ID=gene1341;Dbxref=EcoGene:EG13915,GeneID:947427;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;gene_synonym=ECK1309,JW5202;locus_tag=b1314 NC_000913.3 RefSeq CDS 1376034 1376822 . + 0 ID=cds1298;Parent=gene1341;Dbxref=ASAP:ABE-0004414,UniProtKB/Swiss-Prot:P76044,Genbank:NP_415830.2,EcoGene:EG13915,GeneID:947427;Name=NP_415830.2;gbkey=CDS;gene=ycjR;product=putative TIM alpha/beta barrel enzyme;protein_id=NP_415830.2;transl_table=11 NC_000913.3 RefSeq gene 1376832 1377887 . + . ID=gene1342;Dbxref=EcoGene:EG13916,GeneID:948589;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;gene_synonym=ECK1310,JW1308;locus_tag=b1315 NC_000913.3 RefSeq CDS 1376832 1377887 . + 0 ID=cds1299;Parent=gene1342;Dbxref=ASAP:ABE-0004416,UniProtKB/Swiss-Prot:P77503,Genbank:NP_415831.1,EcoGene:EG13916,GeneID:948589;Name=NP_415831.1;Note=putative dehydrogenase;gbkey=CDS;gene=ycjS;product=putative NADH-binding oxidoreductase;protein_id=NP_415831.1;transl_table=11 NC_000913.3 RefSeq gene 1377884 1380151 . + . ID=gene1343;Dbxref=EcoGene:EG13917,GeneID:945895;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;gene_synonym=ECK1311,JW1309;locus_tag=b1316 NC_000913.3 RefSeq CDS 1377884 1380151 . + 0 ID=cds1300;Parent=gene1343;Dbxref=ASAP:ABE-0004418,UniProtKB/Swiss-Prot:P77154,Genbank:NP_415832.1,EcoGene:EG13917,GeneID:945895;Name=NP_415832.1;gbkey=CDS;gene=ycjT;product=putative family 65 glycosyl hydrolase;protein_id=NP_415832.1;transl_table=11 NC_000913.3 RefSeq gene 1380148 1380807 . + . ID=gene1344;Dbxref=EcoGene:EG13918,GeneID:945891;Name=ycjU;gbkey=Gene;gene=ycjU;gene_biotype=protein_coding;gene_synonym=ECK1312,JW1310;locus_tag=b1317 NC_000913.3 RefSeq CDS 1380148 1380807 . + 0 ID=cds1301;Parent=gene1344;Dbxref=ASAP:ABE-0004420,UniProtKB/Swiss-Prot:P77366,Genbank:NP_415833.1,EcoGene:EG13918,GeneID:945891;Name=NP_415833.1;Note=putative beta-phosphoglucomutase;gbkey=CDS;gene=ycjU;product=beta-phosphoglucomutase;protein_id=NP_415833.1;transl_table=11 NC_000913.3 RefSeq gene 1380821 1381902 . + . ID=gene1345;Dbxref=EcoGene:EG13919,GeneID:4306141;Name=ycjV;gbkey=Gene;gene=ycjV;gene_biotype=pseudogene;gene_synonym=ECK1313,JW1311,ymjB;locus_tag=b4524;pseudo=true NC_000913.3 RefSeq CDS 1380821 1381777 . + 0 ID=cds1302;Parent=gene1345;Dbxref=ASAP:ABE-0004422,ASAP:ABE-0285045,UniProtKB/Swiss-Prot:P77481,EcoGene:EG13919,GeneID:4306141;Note=pseudogene~putative ATP-binding component of a transport system;gbkey=CDS;gene=ycjV;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1381777 1381902 . + 0 ID=cds1302;Parent=gene1345;Dbxref=ASAP:ABE-0004422,ASAP:ABE-0285045,UniProtKB/Swiss-Prot:P77481,EcoGene:EG13919,GeneID:4306141;Note=pseudogene~putative ATP-binding component of a transport system;gbkey=CDS;gene=ycjV;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1381947 1382852 . + . ID=gene1346;Dbxref=EcoGene:EG13428,GeneID:945889;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;gene_synonym=ECK1315,JW1312;locus_tag=b1319 NC_000913.3 RefSeq CDS 1381947 1382852 . + 0 ID=cds1303;Parent=gene1346;Dbxref=ASAP:ABE-0004425,UniProtKB/Swiss-Prot:P76045,Genbank:NP_415835.1,EcoGene:EG13428,GeneID:945889;Name=NP_415835.1;Note=outer membrane protein;gbkey=CDS;gene=ompG;product=outer membrane porin G;protein_id=NP_415835.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1382867 1382940 . + . ID=id180;Note=REP113 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1382963 1383961 . - . ID=gene1347;Dbxref=EcoGene:EG13920,GeneID:945875;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;gene_synonym=ECK1316,JW1313;locus_tag=b1320 NC_000913.3 RefSeq CDS 1382963 1383961 . - 0 ID=cds1304;Parent=gene1347;Dbxref=ASAP:ABE-0004428,UniProtKB/Swiss-Prot:P77615,Genbank:NP_415836.1,EcoGene:EG13920,GeneID:945875;Name=NP_415836.1;Note=putative LACI-type transcriptional regulator;gbkey=CDS;gene=ycjW;product=LacI family putative transcriptional repressor;protein_id=NP_415836.1;transl_table=11 NC_000913.3 RefSeq gene 1384117 1385514 . + . ID=gene1348;Dbxref=EcoGene:EG13921,GeneID:945872;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;gene_synonym=ECK1317,JW1314;locus_tag=b1321 NC_000913.3 RefSeq CDS 1384117 1385514 . + 0 ID=cds1305;Parent=gene1348;Dbxref=ASAP:ABE-0004433,UniProtKB/Swiss-Prot:P76046,Genbank:NP_415837.1,EcoGene:EG13921,GeneID:945872;Name=NP_415837.1;Note=putative EC 2.1 enzymes;gbkey=CDS;gene=ycjX;product=DUF463 family protein%2C puatative P-loop NTPase;protein_id=NP_415837.1;transl_table=11 NC_000913.3 RefSeq gene 1385511 1386572 . + . ID=gene1349;Dbxref=EcoGene:EG12870,GeneID:945878;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;gene_synonym=ECK1318,JW1315;locus_tag=b1322 NC_000913.3 RefSeq CDS 1385511 1386572 . + 0 ID=cds1306;Parent=gene1349;Dbxref=ASAP:ABE-0004436,UniProtKB/Swiss-Prot:P0A8R7,Genbank:NP_415838.1,EcoGene:EG12870,GeneID:945878;Name=NP_415838.1;gbkey=CDS;gene=ycjF;product=UPF0283 family inner membrane protein;protein_id=NP_415838.1;transl_table=11 NC_000913.3 RefSeq gene 1386720 1388261 . + . ID=gene1350;Dbxref=EcoGene:EG11042,GeneID:945879;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;gene_synonym=ECK1319,JW1316;locus_tag=b1323 NC_000913.3 RefSeq CDS 1386720 1388261 . + 0 ID=cds1307;Parent=gene1350;Dbxref=ASAP:ABE-0004440,UniProtKB/Swiss-Prot:P07604,Genbank:NP_415839.1,EcoGene:EG11042,GeneID:945879;Name=NP_415839.1;Note=transcriptional regulation of aroF%2C aroG%2C tyrA and aromatic amino acid transport;gbkey=CDS;gene=tyrR;product=aromatic amino acid biosynthesis and transport regulon transcriptional regulator%3B autorepressor%3B ATPase%3B phosphatase;protein_id=NP_415839.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1388272 1388296 . + . ID=id181;Note=REP114 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1388305 1388811 . - . ID=gene1351;Dbxref=EcoGene:EG12672,GeneID:945880;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;gene_synonym=ECK1320,JW1317,yzzJ;locus_tag=b1324 NC_000913.3 RefSeq CDS 1388305 1388811 . - 0 ID=cds1308;Parent=gene1351;Dbxref=ASAP:ABE-0004442,UniProtKB/Swiss-Prot:P0A862,Genbank:NP_415840.1,EcoGene:EG12672,GeneID:945880;Name=NP_415840.1;Note=thiol peroxidase;gbkey=CDS;gene=tpx;product=lipid hydroperoxide peroxidase;protein_id=NP_415840.1;transl_table=11 NC_000913.3 RefSeq gene 1388930 1389895 . + . ID=gene1352;Dbxref=EcoGene:EG13228,GeneID:946013;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;gene_synonym=ECK1321,JW1318,ycjH;locus_tag=b1325 NC_000913.3 RefSeq CDS 1388930 1389895 . + 0 ID=cds1309;Parent=gene1352;Dbxref=ASAP:ABE-0004448,UniProtKB/Swiss-Prot:P51981,Genbank:NP_415841.4,EcoGene:EG13228,GeneID:946013;Name=NP_415841.4;Note=putative muconate cycloisomerase I;gbkey=CDS;gene=ycjG;product=L-Ala-D/L-Glu epimerase;protein_id=NP_415841.4;transl_table=11 NC_000913.3 RefSeq gene 1389870 1390598 . - . ID=gene1353;Dbxref=EcoGene:EG13906,GeneID:945969;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;gene_synonym=ECK1322,JW1319,ycjI;locus_tag=b1326 NC_000913.3 RefSeq CDS 1389870 1390598 . - 0 ID=cds1310;Parent=gene1353;Dbxref=ASAP:ABE-0004450,UniProtKB/Swiss-Prot:P0ACV6,Genbank:NP_415842.2,EcoGene:EG13906,GeneID:945969;Name=NP_415842.2;Note=putative carboxypeptidase;gbkey=CDS;gene=mpaA;product=murein peptide amidase A;protein_id=NP_415842.2;transl_table=11 NC_000913.3 RefSeq gene 1390725 1390862 . - . ID=gene1354;Dbxref=EcoGene:EG14420,GeneID:1450258;Name=ymjC;gbkey=Gene;gene=ymjC;gene_biotype=pseudogene;gene_synonym=ECK1323,JW5960;locus_tag=b4525;pseudo=true NC_000913.3 RefSeq CDS 1390725 1390862 . - 0 ID=cds1311;Parent=gene1354;Dbxref=ASAP:ABE-0285046,UniProtKB/Swiss-Prot:Q2EER5,EcoGene:EG14420,GeneID:1450258;Note=pseudogene;gbkey=CDS;gene=ymjC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1390868 1390933 . - . ID=gene1355;Dbxref=EcoGene:EG14478,GeneID:7751617;Name=ymjD;gbkey=Gene;gene=ymjD;gene_biotype=pseudogene;gene_synonym=ECK4488;locus_tag=b4673;pseudo=true NC_000913.3 RefSeq CDS 1390868 1390933 . - 0 ID=cds1312;Parent=gene1355;Dbxref=UniProtKB/Swiss-Prot:P0CD93,EcoGene:EG14478,GeneID:7751617;Note=pseudogene fragment%2C MhpC family;gbkey=CDS;gene=ymjD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1390933 1391853 . - . ID=gene1356;Dbxref=EcoGene:EG13922,GeneID:945988;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=protein_coding;gene_synonym=ECK1324,JW5804;locus_tag=b1327 NC_000913.3 RefSeq CDS 1390933 1391853 . - 0 ID=cds1313;Parent=gene1356;Dbxref=ASAP:ABE-0004453,UniProtKB/Swiss-Prot:P76049,Genbank:NP_415843.2,EcoGene:EG13922,GeneID:945988;Name=NP_415843.2;gbkey=CDS;gene=ycjY;product=S9 homolog non-peptidase family protein;protein_id=NP_415843.2;transl_table=11 NC_000913.3 RefSeq gene 1391991 1392890 . + . ID=gene1357;Dbxref=EcoGene:EG13923,GeneID:945930;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;gene_synonym=ECK1325,JW1321,ycjZ;locus_tag=b1328 NC_000913.3 RefSeq CDS 1391991 1392890 . + 0 ID=cds1314;Parent=gene1357;Dbxref=ASAP:ABE-0004457,UniProtKB/Swiss-Prot:P77333,Genbank:NP_415844.1,EcoGene:EG13923,GeneID:945930;Name=NP_415844.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=pgrR;product=murein peptide degradation regulator;protein_id=NP_415844.1;transl_table=11 NC_000913.3 RefSeq gene 1393227 1394840 . + . ID=gene1358;Dbxref=EcoGene:EG13376,GeneID:945951;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;gene_synonym=ECK1326,JW1322,ynaH;locus_tag=b1329 NC_000913.3 RefSeq CDS 1393227 1394840 . + 0 ID=cds1315;Parent=gene1358;Dbxref=ASAP:ABE-0004460,UniProtKB/Swiss-Prot:P77348,Genbank:NP_415845.2,EcoGene:EG13376,GeneID:945951;Name=NP_415845.2;Note=periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=mppA;product=murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit;protein_id=NP_415845.2;transl_table=11 NC_000913.3 RefSeq gene 1394891 1395922 . - . ID=gene1359;Dbxref=EcoGene:EG13924,GeneID:945898;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;gene_synonym=ECK1327,JW1323;locus_tag=b1330 NC_000913.3 RefSeq CDS 1394891 1395922 . - 0 ID=cds1316;Parent=gene1359;Dbxref=ASAP:ABE-0004462,UniProtKB/Swiss-Prot:P0AEB5,Genbank:NP_415846.1,EcoGene:EG13924,GeneID:945898;Name=NP_415846.1;gbkey=CDS;gene=ynaI;product=mechanosensitive channel protein%2C very small conductance;protein_id=NP_415846.1;transl_table=11 NC_000913.3 RefSeq region 1396044 1397238 . + . ID=id182;gbkey=mobile_element NC_000913.3 RefSeq gene 1396076 1397092 . + . ID=gene1360;Dbxref=EcoGene:EG40008,GeneID:945896;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b1331 NC_000913.3 RefSeq CDS 1396076 1397092 . + 0 ID=cds1317;Parent=gene1360;Dbxref=ASAP:ABE-0004467,UniProtKB/Swiss-Prot:P0CE52,Genbank:NP_415847.1,EcoGene:EG40008,GeneID:945896;Name=NP_415847.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_415847.1;transl_table=11 NC_000913.3 RefSeq gene 1397365 1397622 . + . ID=gene1361;Dbxref=EcoGene:EG14294,GeneID:945901;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;gene_synonym=ECK1328,JW1326;locus_tag=b1332 NC_000913.3 RefSeq CDS 1397365 1397622 . + 0 ID=cds1318;Parent=gene1361;Dbxref=ASAP:ABE-0004470,UniProtKB/Swiss-Prot:P64445,Genbank:NP_415848.1,EcoGene:EG14294,GeneID:945901;Name=NP_415848.1;gbkey=CDS;gene=ynaJ;product=DUF2534 family putative inner membrane protein;protein_id=NP_415848.1;transl_table=11 NC_000913.3 RefSeq gene 1397672 1398622 . - . ID=gene1362;Dbxref=EcoGene:EG11246,GeneID:945904;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;gene_synonym=ECK1329,JW1327,ydaA;locus_tag=b1333 NC_000913.3 RefSeq CDS 1397672 1398622 . - 0 ID=cds1319;Parent=gene1362;Dbxref=ASAP:ABE-0004472,UniProtKB/Swiss-Prot:P0AAC0,Genbank:NP_415849.1,EcoGene:EG11246,GeneID:945904;Name=NP_415849.1;gbkey=CDS;gene=uspE;product=stress-induced protein;protein_id=NP_415849.1;transl_table=11 NC_000913.3 RefSeq gene 1398774 1399526 . - . ID=gene1363;Dbxref=EcoGene:EG10325,GeneID:945908;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;gene_synonym=ECK1330,JW1328,nirA,nirR,ossA;locus_tag=b1334 NC_000913.3 RefSeq CDS 1398774 1399526 . - 0 ID=cds1320;Parent=gene1363;Dbxref=ASAP:ABE-0004475,UniProtKB/Swiss-Prot:P0A9E5,Genbank:NP_415850.1,EcoGene:EG10325,GeneID:945908;Name=NP_415850.1;Note=transcriptional regulation of aerobic%2C anaerobic respiration%2C osmotic balance;gbkey=CDS;gene=fnr;product=oxygen-sensing anaerobic growth regulon transcriptional regulator FNR%3B autorepressor;protein_id=NP_415850.1;transl_table=11 NC_000913.3 RefSeq gene 1399721 1400236 . - . ID=gene1364;Dbxref=EcoGene:EG10668,GeneID:945853;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;gene_synonym=ECK1331,JW1329;locus_tag=b1335 NC_000913.3 RefSeq CDS 1399721 1400236 . - 0 ID=cds1321;Parent=gene1364;Dbxref=ASAP:ABE-0004486,UniProtKB/Swiss-Prot:P0AFH0,Genbank:NP_415851.1,EcoGene:EG10668,GeneID:945853;Name=NP_415851.1;Note=O-6-alkylguanine-DNA/cysteine-protein methyltransferase;gbkey=CDS;gene=ogt;product=O-6-alkylguanine-DNA:cysteine-protein methyltransferase;protein_id=NP_415851.1;transl_table=11 NC_000913.3 RefSeq gene 1400247 1401773 . - . ID=gene1365;Dbxref=EcoGene:EG12853,GeneID:945912;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;gene_synonym=ECK1332,JW5822,ydaH;locus_tag=b1336 NC_000913.3 RefSeq CDS 1400247 1401773 . - 0 ID=cds1322;Parent=gene1365;Dbxref=ASAP:ABE-0004488,UniProtKB/Swiss-Prot:P46133,Genbank:NP_415852.2,EcoGene:EG12853,GeneID:945912;Name=NP_415852.2;gbkey=CDS;gene=abgT;product=p-aminobenzoyl-glutamate transporter%3B membrane protein;protein_id=NP_415852.2;transl_table=11 NC_000913.3 RefSeq gene 1401810 1403255 . - . ID=gene1366;Dbxref=EcoGene:EG13351,GeneID:945950;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;gene_synonym=ECK1333,JW1331,ydaI;locus_tag=b1337 NC_000913.3 RefSeq CDS 1401810 1403255 . - 0 ID=cds1323;Parent=gene1366;Dbxref=ASAP:ABE-0004491,UniProtKB/Swiss-Prot:P76052,Genbank:NP_415853.1,EcoGene:EG13351,GeneID:945950;Name=NP_415853.1;gbkey=CDS;gene=abgB;product=p-aminobenzoyl-glutamate hydrolase%2C B subunit;protein_id=NP_415853.1;transl_table=11 NC_000913.3 RefSeq gene 1403255 1404565 . - . ID=gene1367;Dbxref=EcoGene:EG13352,GeneID:945742;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;gene_synonym=ECK1334,JW5205,ydaJ;locus_tag=b1338 NC_000913.3 RefSeq CDS 1403255 1404565 . - 0 ID=cds1324;Parent=gene1367;Dbxref=ASAP:ABE-0004493,UniProtKB/Swiss-Prot:P77357,Genbank:NP_415854.4,EcoGene:EG13352,GeneID:945742;Name=NP_415854.4;gbkey=CDS;gene=abgA;product=p-aminobenzoyl-glutamate hydrolase%2C A subunit;protein_id=NP_415854.4;transl_table=11 NC_000913.3 RefSeq gene 1404741 1405649 . + . ID=gene1368;Dbxref=EcoGene:EG13353,GeneID:945831;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;gene_synonym=ECK1335,JW1333,ydaK;locus_tag=b1339 NC_000913.3 RefSeq CDS 1404741 1405649 . + 0 ID=cds1325;Parent=gene1368;Dbxref=ASAP:ABE-0004496,UniProtKB/Swiss-Prot:P77744,Genbank:NP_415855.1,EcoGene:EG13353,GeneID:945831;Name=NP_415855.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=abgR;product=putative DNA-binding transcriptional regulator of abgABT operon;protein_id=NP_415855.1;transl_table=11 NC_000913.3 RefSeq gene 1405656 1405751 . - . ID=gene1369;Dbxref=EcoGene:EG31143,GeneID:2847751;Name=mcaS;gbkey=Gene;gene=mcaS;gene_biotype=antisense_RNA;gene_synonym=ECK1336,IS061,isrA,JWR0233;locus_tag=b4426 NC_000913.3 RefSeq ncRNA 1405656 1405751 . - . ID=rna43;Parent=gene1369;Dbxref=ASAP:ABE-0047247,EcoGene:EG31143,GeneID:2847751;Note=identified in a large scale screen;gbkey=ncRNA;gene=mcaS;ncrna_class=antisense_RNA;product=motility and biofilm regulator sRNA NC_000913.3 RefSeq exon 1405656 1405751 . - . ID=id183;Parent=rna43;Dbxref=ASAP:ABE-0047247,EcoGene:EG31143,GeneID:2847751;Note=identified in a large scale screen;gbkey=ncRNA;gene=mcaS;ncrna_class=antisense_RNA;product=motility and biofilm regulator sRNA NC_000913.3 RefSeq gene 1405979 1406542 . + . ID=gene1370;Dbxref=EcoGene:EG13354,GeneID:945953;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;gene_synonym=ECK1337,JW1334,ydaL;locus_tag=b1340 NC_000913.3 RefSeq CDS 1405979 1406542 . + 0 ID=cds1326;Parent=gene1370;Dbxref=ASAP:ABE-0004502,UniProtKB/Swiss-Prot:P76053,Genbank:NP_415856.1,EcoGene:EG13354,GeneID:945953;Name=NP_415856.1;gbkey=CDS;gene=smrA;product=DNA endonuclease;protein_id=NP_415856.1;transl_table=11 NC_000913.3 RefSeq gene 1406563 1407795 . - . ID=gene1371;Dbxref=EcoGene:EG13355,GeneID:945909;Name=ydaM;gbkey=Gene;gene=ydaM;gene_biotype=protein_coding;gene_synonym=ECK1338,JW5206;locus_tag=b1341 NC_000913.3 RefSeq CDS 1406563 1407795 . - 0 ID=cds1327;Parent=gene1371;Dbxref=ASAP:ABE-0004504,UniProtKB/Swiss-Prot:P77302,Genbank:NP_415857.2,EcoGene:EG13355,GeneID:945909;Name=NP_415857.2;gbkey=CDS;gene=ydaM;product=diguanylate cyclase%2C csgD regulator;protein_id=NP_415857.2;transl_table=11 NC_000913.3 RefSeq gene 1408050 1409033 . + . ID=gene1372;Dbxref=EcoGene:EG13356,GeneID:945910;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;gene_synonym=ECK1339,JW1336,zntB;locus_tag=b1342 NC_000913.3 RefSeq CDS 1408050 1409033 . + 0 ID=cds1328;Parent=gene1372;Dbxref=ASAP:ABE-0004508,UniProtKB/Swiss-Prot:P64423,Genbank:NP_415858.1,EcoGene:EG13356,GeneID:945910;Name=NP_415858.1;gbkey=CDS;gene=ydaN;product=putative Zn(II) transporter;protein_id=NP_415858.1;transl_table=11 NC_000913.3 RefSeq gene 1409129 1409250 . + . ID=gene1373;Dbxref=EcoGene:EG31185,GeneID:8764968;Name=fnrS;gbkey=Gene;gene=fnrS;gene_biotype=antisense_RNA;gene_synonym=ECK4511,rydA;locus_tag=b4699 NC_000913.3 RefSeq ncRNA 1409129 1409250 . + . ID=rna44;Parent=gene1373;Dbxref=ASAP:ABE-0285265,EcoGene:EG31185,GeneID:8764968;gbkey=ncRNA;gene=fnrS;ncrna_class=antisense_RNA;product=FNR-activated anaerobic sRNA antisense regulator down regulates cydDC%2C metE%2C sodA%2C sodB%2C Hfq-dependent%3B mediates negative FNR regulation NC_000913.3 RefSeq exon 1409129 1409250 . + . ID=id184;Parent=rna44;Dbxref=ASAP:ABE-0285265,EcoGene:EG31185,GeneID:8764968;gbkey=ncRNA;gene=fnrS;ncrna_class=antisense_RNA;product=FNR-activated anaerobic sRNA antisense regulator down regulates cydDC%2C metE%2C sodA%2C sodB%2C Hfq-dependent%3B mediates negative FNR regulation NC_000913.3 RefSeq gene 1409511 1410884 . + . ID=gene1374;Dbxref=EcoGene:EG10210,GeneID:947153;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;gene_synonym=ECK1340,JW1337,rhlC;locus_tag=b1343 NC_000913.3 RefSeq CDS 1409511 1410884 . + 0 ID=cds1329;Parent=gene1374;Dbxref=ASAP:ABE-0004511,UniProtKB/Swiss-Prot:P21693,Genbank:NP_415859.1,EcoGene:EG10210,GeneID:947153;Name=NP_415859.1;Note=ATP-dependent RNA helicase;gbkey=CDS;gene=dbpA;product=ATP-dependent RNA helicase%2C specific for 23S rRNA;protein_id=NP_415859.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1410933 1410969 . + . ID=id185;Note=REP115 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1411013 1411948 . - . ID=gene1375;Dbxref=EcoGene:EG13357,GeneID:948967;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;gene_synonym=ECK1341,JW1338,stcA,ydaO;locus_tag=b1344 NC_000913.3 RefSeq CDS 1411013 1411948 . - 0 ID=cds1330;Parent=gene1375;Dbxref=ASAP:ABE-0004514,UniProtKB/Swiss-Prot:P76055,Genbank:NP_415860.1,EcoGene:EG13357,GeneID:948967;Name=NP_415860.1;gbkey=CDS;gene=ttcA;product=tRNA s(2)C32 thioltransferase%2C iron sulfur cluster protein;protein_id=NP_415860.1;transl_table=11 NC_000913.3 RefSeq region 1411899 1434958 . + . ID=id186;Note=cryptic prophage Rac;gbkey=misc_feature;gene=ttcA NC_000913.3 RefSeq gene 1412000 1413235 . - . ID=gene1376;Dbxref=EcoGene:EG13358,GeneID:946976;Name=intR;gbkey=Gene;gene=intR;gene_biotype=protein_coding;gene_synonym=ECK1342,JW1339,ydaP;locus_tag=b1345 NC_000913.3 RefSeq CDS 1412000 1413235 . - 0 ID=cds1331;Parent=gene1376;Dbxref=ASAP:ABE-0004517,UniProtKB/Swiss-Prot:P76056,Genbank:NP_415861.1,EcoGene:EG13358,GeneID:946976;Name=NP_415861.1;gbkey=CDS;gene=intR;product=Rac prophage%3B integrase;protein_id=NP_415861.1;transl_table=11 NC_000913.3 RefSeq gene 1413237 1413452 . - . ID=gene1377;Dbxref=EcoGene:EG13359,GeneID:947399;Name=ydaQ;gbkey=Gene;gene=ydaQ;gene_biotype=protein_coding;gene_synonym=ECK1343,JW5207;locus_tag=b1346 NC_000913.3 RefSeq CDS 1413237 1413452 . - 0 ID=cds1332;Parent=gene1377;Dbxref=ASAP:ABE-0004519,UniProtKB/Swiss-Prot:P76057,Genbank:NP_415862.4,EcoGene:EG13359,GeneID:947399;Name=NP_415862.4;Note=putative lambdoid prophage Rac excisionase;gbkey=CDS;gene=ydaQ;product=Rac prophage%3B conserved protein;protein_id=NP_415862.4;transl_table=11 NC_000913.3 RefSeq gene 1413531 1413740 . - . ID=gene1378;Dbxref=EcoGene:EG11901,GeneID:947504;Name=ydaC;gbkey=Gene;gene=ydaC;gene_biotype=protein_coding;gene_synonym=ECK1344,JW1341,rcbA;locus_tag=b1347 NC_000913.3 RefSeq CDS 1413531 1413740 . - 0 ID=cds1333;Parent=gene1378;Dbxref=ASAP:ABE-0004522,UniProtKB/Swiss-Prot:P33230,Genbank:NP_415863.1,EcoGene:EG11901,GeneID:947504;Name=NP_415863.1;gbkey=CDS;gene=ydaC;product=DUF1187 family protein%2C Rac prophage%3B putative double-strand break reduction protein;protein_id=NP_415863.1;transl_table=11 NC_000913.3 RefSeq gene 1413556 1413734 . + . ID=gene1379;Dbxref=EcoGene:EG31192,GeneID:20160642;Name=ralA;Note=Antisense sRNA antitoxin for the RalR toxin;gbkey=Gene;gene=ralA;gene_biotype=other;gene_synonym=ECK4571,rcbA;locus_tag=b4714 NC_000913.3 RefSeq gene 1413733 1413927 . - . ID=gene1380;Dbxref=EcoGene:EG11900,GeneID:945914;Name=ralR;gbkey=Gene;gene=ralR;gene_biotype=protein_coding;gene_synonym=ECK1345,JW5208,lar,ral,ydaB;locus_tag=b1348 NC_000913.3 RefSeq CDS 1413733 1413927 . - 0 ID=cds1334;Parent=gene1380;Dbxref=ASAP:ABE-0004524,UniProtKB/Swiss-Prot:P33229,Genbank:NP_415864.1,EcoGene:EG11900,GeneID:945914;Name=NP_415864.1;Note=restriction alleviation and modification enhancement;gbkey=CDS;gene=ralR;product=Rac prophage%3B restriction alleviation protein;protein_id=NP_415864.1;transl_table=11 NC_000913.3 RefSeq gene 1413984 1414793 . - . ID=gene1381;Dbxref=EcoGene:EG11899,GeneID:945917;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;gene_synonym=ECK1346,JW1343;locus_tag=b1349 NC_000913.3 RefSeq CDS 1413984 1414793 . - 0 ID=cds1335;Parent=gene1381;Dbxref=ASAP:ABE-0004529,UniProtKB/Swiss-Prot:P33228,Genbank:NP_415865.1,EcoGene:EG11899,GeneID:945917;Name=NP_415865.1;Note=recombinase%2C DNA renaturation;gbkey=CDS;gene=recT;product=Rac prophage%3B recombination and repair protein;protein_id=NP_415865.1;transl_table=11 NC_000913.3 RefSeq gene 1414786 1417386 . - . ID=gene1382;Dbxref=EcoGene:EG10827,GeneID:945918;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;gene_synonym=ECK1347,JW1344,rmuB,sbcA;locus_tag=b1350 NC_000913.3 RefSeq CDS 1414786 1417386 . - 0 ID=cds1336;Parent=gene1382;Dbxref=ASAP:ABE-0004531,UniProtKB/Swiss-Prot:P15032,Genbank:NP_415866.1,EcoGene:EG10827,GeneID:945918;Name=NP_415866.1;Note=exonuclease VIII%2C ds DNA exonuclease%2C 5' --> 3' specific;gbkey=CDS;gene=recE;product=Rac prophage%3B exonuclease VIII%2C 5' to 3' specific dsDNA exonuclease;protein_id=NP_415866.1;transl_table=11 NC_000913.3 RefSeq gene 1417488 1417763 . - . ID=gene1383;Dbxref=EcoGene:EG10813,GeneID:945920;Name=racC;gbkey=Gene;gene=racC;gene_biotype=protein_coding;gene_synonym=ECK1348,JW1345,sbcA;locus_tag=b1351 NC_000913.3 RefSeq CDS 1417488 1417763 . - 0 ID=cds1337;Parent=gene1383;Dbxref=ASAP:ABE-0004533,UniProtKB/Swiss-Prot:P15033,Genbank:NP_415867.1,EcoGene:EG10813,GeneID:945920;Name=NP_415867.1;Note=RacC protein;gbkey=CDS;gene=racC;product=Rac prophage%3B uncharacterized protein;protein_id=NP_415867.1;transl_table=11 NC_000913.3 RefSeq gene 1417838 1418008 . - . ID=gene1384;Dbxref=EcoGene:EG12156,GeneID:948959;Name=ydaE;gbkey=Gene;gene=ydaE;gene_biotype=protein_coding;gene_synonym=ECK1349,JW1346;locus_tag=b4526 NC_000913.3 RefSeq CDS 1417838 1418008 . - 0 ID=cds1338;Parent=gene1384;Dbxref=ASAP:ABE-0285047,UniProtKB/Swiss-Prot:P38394,Genbank:YP_588451.1,EcoGene:EG12156,GeneID:948959;Name=YP_588451.1;gbkey=CDS;gene=ydaE;product=conserved protein%2C Rac prophage;protein_id=YP_588451.1;transl_table=11 NC_000913.3 RefSeq gene 1418008 1418229 . - . ID=gene1385;Dbxref=EcoGene:EG12155,GeneID:945921;Name=kilR;gbkey=Gene;gene=kilR;gene_biotype=protein_coding;gene_synonym=ECK1350,JW1347,kil,ydaD;locus_tag=b1352 NC_000913.3 RefSeq CDS 1418008 1418229 . - 0 ID=cds1339;Parent=gene1385;Dbxref=ASAP:ABE-0004537,UniProtKB/Swiss-Prot:P38393,Genbank:NP_415869.2,EcoGene:EG12155,GeneID:945921;Name=NP_415869.2;Note=Kil protein (killing function) of lambdoid prophage Rac;gbkey=CDS;gene=kilR;product=killing protein%2C Rac prophage%3B FtsZ inhibitor protein;protein_id=NP_415869.2;transl_table=11 NC_000913.3 RefSeq gene 1418671 1419159 . + . ID=gene1386;Dbxref=EcoGene:EG12154,GeneID:945913;Name=sieB;gbkey=Gene;gene=sieB;gene_biotype=protein_coding;gene_synonym=ECK1351,git,JW5209;locus_tag=b1353 NC_000913.3 RefSeq CDS 1418671 1419159 . + 0 ID=cds1340;Parent=gene1386;Dbxref=ASAP:ABE-0004540,UniProtKB/Swiss-Prot:P38392,Genbank:NP_415870.4,EcoGene:EG12154,GeneID:945913;Name=NP_415870.4;Note=phage superinfection exclusion protein;gbkey=CDS;gene=sieB;product=phage superinfection exclusion protein%2C Rac prophage;protein_id=NP_415870.4;transl_table=11 NC_000913.3 RefSeq gene 1419156 1419311 . - . ID=gene1387;Dbxref=EcoGene:EG12157,GeneID:945911;Name=ydaF;gbkey=Gene;gene=ydaF;gene_biotype=protein_coding;gene_synonym=ECK1352,JW1349;locus_tag=b4527 NC_000913.3 RefSeq CDS 1419156 1419311 . - 0 ID=cds1341;Parent=gene1387;Dbxref=ASAP:ABE-0285048,UniProtKB/Swiss-Prot:P0ACW0,Genbank:NP_415872.2,EcoGene:EG12157,GeneID:945911;Name=NP_415872.2;gbkey=CDS;gene=ydaF;product=uncharacterized protein%2C Rac prophage;protein_id=NP_415872.2;transl_table=11 NC_000913.3 RefSeq gene 1419322 1419456 . - . ID=gene1388;Dbxref=EcoGene:EG12174,GeneID:945907;Name=ydaG;gbkey=Gene;gene=ydaG;gene_biotype=protein_coding;gene_synonym=ECK1353,gatA,JW5210;locus_tag=b1355 NC_000913.3 RefSeq CDS 1419322 1419456 . - 0 ID=cds1342;Parent=gene1388;Dbxref=ASAP:ABE-0004544,UniProtKB/Swiss-Prot:P76061,Genbank:NP_415873.2,EcoGene:EG12174,GeneID:945907;Name=NP_415873.2;gbkey=CDS;gene=ydaG;product=Rac prophage%3B uncharacterized protein;protein_id=NP_415873.2;transl_table=11 NC_000913.3 RefSeq gene 1419765 1420241 . - . ID=gene1389;Dbxref=EcoGene:EG13360,GeneID:945899;Name=racR;gbkey=Gene;gene=racR;gene_biotype=protein_coding;gene_synonym=cohR,ECK1354,JW1351,ydaR;locus_tag=b1356 NC_000913.3 RefSeq CDS 1419765 1420241 . - 0 ID=cds1343;Parent=gene1389;Dbxref=ASAP:ABE-0004548,UniProtKB/Swiss-Prot:P76062,Genbank:NP_415874.1,EcoGene:EG13360,GeneID:945899;Name=NP_415874.1;gbkey=CDS;gene=racR;product=Rac prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_415874.1;transl_table=11 NC_000913.3 RefSeq gene 1420365 1420661 . + . ID=gene1390;Dbxref=EcoGene:EG13361,GeneID:945923;Name=ydaS;gbkey=Gene;gene=ydaS;gene_biotype=protein_coding;gene_synonym=ECK1355,JW1352;locus_tag=b1357 NC_000913.3 RefSeq CDS 1420365 1420661 . + 0 ID=cds1344;Parent=gene1390;Dbxref=ASAP:ABE-0004552,UniProtKB/Swiss-Prot:P76063,Genbank:NP_415875.1,EcoGene:EG13361,GeneID:945923;Name=NP_415875.1;gbkey=CDS;gene=ydaS;product=Rac prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_415875.1;transl_table=11 NC_000913.3 RefSeq gene 1420684 1421106 . + . ID=gene1391;Dbxref=EcoGene:EG13362,GeneID:945924;Name=ydaT;gbkey=Gene;gene=ydaT;gene_biotype=protein_coding;gene_synonym=ECK1356,JW1353;locus_tag=b1358 NC_000913.3 RefSeq CDS 1420684 1421106 . + 0 ID=cds1345;Parent=gene1391;Dbxref=ASAP:ABE-0004556,UniProtKB/Swiss-Prot:P76064,Genbank:NP_415876.1,EcoGene:EG13362,GeneID:945924;Name=NP_415876.1;gbkey=CDS;gene=ydaT;product=Rac prophage%3B uncharacterized protein;protein_id=NP_415876.1;transl_table=11 NC_000913.3 RefSeq gene 1421119 1421976 . + . ID=gene1392;Dbxref=EcoGene:EG13363,GeneID:945925;Name=ydaU;gbkey=Gene;gene=ydaU;gene_biotype=protein_coding;gene_synonym=ECK1357,JW1354;locus_tag=b1359 NC_000913.3 RefSeq CDS 1421119 1421976 . + 0 ID=cds1346;Parent=gene1392;Dbxref=ASAP:ABE-0004558,UniProtKB/Swiss-Prot:P76065,Genbank:NP_415877.1,EcoGene:EG13363,GeneID:945925;Name=NP_415877.1;gbkey=CDS;gene=ydaU;product=Rac prophage%3B conserved protein;protein_id=NP_415877.1;transl_table=11 NC_000913.3 RefSeq gene 1421983 1422729 . + . ID=gene1393;Dbxref=EcoGene:EG13364,GeneID:945926;Name=ydaV;gbkey=Gene;gene=ydaV;gene_biotype=protein_coding;gene_synonym=ECK1358,JW1355;locus_tag=b1360 NC_000913.3 RefSeq CDS 1421983 1422729 . + 0 ID=cds1347;Parent=gene1393;Dbxref=ASAP:ABE-0004560,UniProtKB/Swiss-Prot:P77546,Genbank:NP_415878.1,EcoGene:EG13364,GeneID:945926;Name=NP_415878.1;Note=putative DNA replication factor;gbkey=CDS;gene=ydaV;product=Rac prophage%3B putative DNA replication protein;protein_id=NP_415878.1;transl_table=11 NC_000913.3 RefSeq gene 1422701 1423200 . + . ID=gene1394;Dbxref=EcoGene:EG13365,GeneID:945927;Name=ydaW;gbkey=Gene;gene=ydaW;gene_biotype=pseudogene;gene_synonym=ECK1359,JW5211;locus_tag=b1361;pseudo=true NC_000913.3 RefSeq CDS 1422701 1423200 . + 0 ID=cds1348;Parent=gene1394;Dbxref=ASAP:ABE-0004562,UniProtKB/Swiss-Prot:P76066,EcoGene:EG13365,GeneID:945927;Note=Rac prophage%3B pseudogene%2C DNA-binding protein family%3BPhage or Prophage Related;gbkey=CDS;gene=ydaW;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1423201 1423644 . + . ID=gene1395;Dbxref=EcoGene:EG13366,GeneID:945928;Name=rzpR;gbkey=Gene;gene=rzpR;gene_biotype=pseudogene;gene_synonym=ECK1360,JW5212,Rz,ydaX;locus_tag=b1362;pseudo=true NC_000913.3 RefSeq CDS 1423201 1423644 . + 0 ID=cds1349;Parent=gene1395;Dbxref=ASAP:ABE-0004564,UniProtKB/Swiss-Prot:P77551,EcoGene:EG13366,GeneID:945928;Note=pseudogene%2C Rac prophage%3B Bacteriophage Rz lysis protein family%3BPhage or Prophage Related~putative Rac prophage endopeptidase~completely contained in another CDS;gbkey=CDS;gene=rzpR;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1423400 1423585 . + . ID=gene1396;Dbxref=EcoGene:EG14381,GeneID:1450262;Name=rzoR;gbkey=Gene;gene=rzoR;gene_biotype=protein_coding;gene_synonym=ECK1361,JW5213,Rz1;locus_tag=b4528 NC_000913.3 RefSeq CDS 1423400 1423585 . + 0 ID=cds1350;Parent=gene1396;Dbxref=ASAP:ABE-0285049,UniProtKB/Swiss-Prot:P58042,Genbank:YP_588452.1,EcoGene:EG14381,GeneID:1450262;Name=YP_588452.1;Note=completely contained in another CDS;gbkey=CDS;gene=rzoR;product=Rac prophage%3B putative lipoprotein;protein_id=YP_588452.1;transl_table=11 NC_000913.3 RefSeq gene 1423782 1425239 . + . ID=gene1397;Dbxref=EcoGene:EG11020,GeneID:945932;Name=trkG;gbkey=Gene;gene=trkG;gene_biotype=protein_coding;gene_synonym=ECK1362,JW1358;locus_tag=b1363 NC_000913.3 RefSeq CDS 1423782 1425239 . + 0 ID=cds1351;Parent=gene1397;Dbxref=ASAP:ABE-0004567,UniProtKB/Swiss-Prot:P23849,Genbank:NP_415881.1,EcoGene:EG11020,GeneID:945932;Name=NP_415881.1;gbkey=CDS;gene=trkG;product=Rac prophage%3B potassium transporter subunit;protein_id=NP_415881.1;transl_table=11 NC_000913.3 RefSeq gene 1425377 1425640 . + . ID=gene1398;Dbxref=EcoGene:EG14296,GeneID:947417;Name=ynaK;gbkey=Gene;gene=ynaK;gene_biotype=protein_coding;gene_synonym=ECK1363,JW1359;locus_tag=b1365 NC_000913.3 RefSeq CDS 1425377 1425640 . + 0 ID=cds1352;Parent=gene1398;Dbxref=ASAP:ABE-0004571,UniProtKB/Swiss-Prot:P76068,Genbank:NP_415883.1,EcoGene:EG14296,GeneID:947417;Name=NP_415883.1;gbkey=CDS;gene=ynaK;product=Rac prophage%3B conserved protein;protein_id=NP_415883.1;transl_table=11 NC_000913.3 RefSeq gene 1425630 1426082 . + . ID=gene1399;Dbxref=EcoGene:EG13367,GeneID:946208;Name=ydaY;gbkey=Gene;gene=ydaY;gene_biotype=pseudogene;gene_synonym=ECK1364,JW1360;locus_tag=b1366;pseudo=true NC_000913.3 RefSeq CDS 1425630 1426082 . + 0 ID=cds1353;Parent=gene1399;Dbxref=ASAP:ABE-0004574,UniProtKB/Swiss-Prot:P76069,EcoGene:EG13367,GeneID:946208;Note=pseudogene%2C Rac prophage%3BPhage or Prophage Related;gbkey=CDS;gene=ydaY;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1426454 1427386 . + . ID=gene1400;Dbxref=EcoGene:EG13369,GeneID:947543;Name=tmpR;gbkey=Gene;gene=tmpR;gene_biotype=pseudogene;gene_synonym=ECK1365,JW1361,ynaA;locus_tag=b1368;pseudo=true NC_000913.3 RefSeq CDS 1426454 1427386 . + 0 ID=cds1354;Parent=gene1400;Dbxref=ASAP:ABE-0004581,UniProtKB/Swiss-Prot:P77658,EcoGene:EG13369,GeneID:947543;Note=Rac prophage%3B pseudogene%2C tail protein family%3BPhage or Prophage Related~putative alpha helix protein;gbkey=CDS;gene=tmpR;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1427389 1427598 . + . ID=gene1401;Dbxref=EcoGene:EG14315,GeneID:4056036;Name=lomR;gbkey=Gene;gene=lomR;gene_biotype=pseudogene;gene_synonym=ECK1366,JW5884,JW5904;locus_tag=b4570;part=1/2;pseudo=true NC_000913.3 RefSeq gene 1428796 1428984 . + . ID=gene1401;Dbxref=EcoGene:EG14315,GeneID:4056036;Name=lomR;gbkey=Gene;gene=lomR;gene_biotype=pseudogene;gene_synonym=ECK1366,JW5884,JW5904;locus_tag=b4570;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 1427389 1427598 . + 0 ID=cds1355;Parent=gene1401;Dbxref=ASAP:ABE-0004583,ASAP:ABE-0004590,ASAP:ABE-0285103,UniProtKB/Swiss-Prot:P77184,EcoGene:EG14315,GeneID:4056036;Note=pseudogene%2C Rac prophage lom homolog%3BPhage or Prophage Related~interrupted by IS5 and N-ter deletion;gbkey=CDS;gene=lomR;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1428796 1428984 . + 0 ID=cds1355;Parent=gene1401;Dbxref=ASAP:ABE-0004583,ASAP:ABE-0004590,ASAP:ABE-0285103,UniProtKB/Swiss-Prot:P77184,EcoGene:EG14315,GeneID:4056036;Note=pseudogene%2C Rac prophage lom homolog%3BPhage or Prophage Related~interrupted by IS5 and N-ter deletion;gbkey=CDS;gene=lomR;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 1427599 1428794 . - . ID=id187;gbkey=mobile_element NC_000913.3 RefSeq gene 1427746 1428726 . - . ID=gene1402;Dbxref=EcoGene:EG40008,GeneID:945944;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b1370 NC_000913.3 RefSeq CDS 1427746 1428726 . - 0 ID=cds1356;Parent=gene1402;Dbxref=ASAP:ABE-0004586,UniProtKB/Swiss-Prot:P0CE53,Genbank:NP_415888.1,EcoGene:EG40008,GeneID:945944;Name=NP_415888.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_415888.1;transl_table=11 NC_000913.3 RefSeq gene 1429049 1432411 . + . ID=gene1403;Dbxref=EcoGene:EG13370,GeneID:945207;Name=stfR;gbkey=Gene;gene=stfR;gene_biotype=protein_coding;gene_synonym=ECK1367,JW1366,ynaB;locus_tag=b1372 NC_000913.3 RefSeq CDS 1429049 1432411 . + 0 ID=cds1357;Parent=gene1403;Dbxref=ASAP:ABE-0004595,UniProtKB/Swiss-Prot:P76072,Genbank:NP_415890.2,EcoGene:EG13370,GeneID:945207;Name=NP_415890.2;gbkey=CDS;gene=stfR;product=Rac prophage%3B putative tail fiber protein;protein_id=NP_415890.2;transl_table=11 NC_000913.3 RefSeq gene 1432411 1432986 . + . ID=gene1404;Dbxref=EcoGene:EG13371,GeneID:946062;Name=tfaR;gbkey=Gene;gene=tfaR;gene_biotype=protein_coding;gene_synonym=ECK1368,JW1367,ynaC;locus_tag=b1373 NC_000913.3 RefSeq CDS 1432411 1432986 . + 0 ID=cds1358;Parent=gene1404;Dbxref=ASAP:ABE-0004597,UniProtKB/Swiss-Prot:P77163,Genbank:NP_415891.1,EcoGene:EG13371,GeneID:946062;Name=NP_415891.1;Note=tail fiber assembly protein homolog from lambdoid prophage Rac;gbkey=CDS;gene=tfaR;product=Rac prophage%3B putative tail fiber assembly protein;protein_id=NP_415891.1;transl_table=11 NC_000913.3 RefSeq gene 1433084 1433674 . - . ID=gene1405;Dbxref=EcoGene:EG13372,GeneID:948973;Name=pinR;gbkey=Gene;gene=pinR;gene_biotype=protein_coding;gene_synonym=ECK1369,JW1368,ynaD;locus_tag=b1374 NC_000913.3 RefSeq CDS 1433084 1433674 . - 0 ID=cds1359;Parent=gene1405;Dbxref=ASAP:ABE-0004599,UniProtKB/Swiss-Prot:P0ADI0,Genbank:NP_415892.1,EcoGene:EG13372,GeneID:948973;Name=NP_415892.1;gbkey=CDS;gene=pinR;product=Rac prophage%3B putative site-specific recombinase;protein_id=NP_415892.1;transl_table=11 NC_000913.3 RefSeq gene 1433991 1434224 . - . ID=gene1406;Dbxref=EcoGene:EG13373,GeneID:946078;Name=ynaE;gbkey=Gene;gene=ynaE;gene_biotype=protein_coding;gene_synonym=ECK1370,JW1369;locus_tag=b1375 NC_000913.3 RefSeq CDS 1433991 1434224 . - 0 ID=cds1360;Parent=gene1406;Dbxref=ASAP:ABE-0004602,UniProtKB/Swiss-Prot:P76073,Genbank:NP_415893.2,EcoGene:EG13373,GeneID:946078;Name=NP_415893.2;gbkey=CDS;gene=ynaE;product=cold shock protein%2C Rac prophage;protein_id=NP_415893.2;transl_table=11 NC_000913.3 RefSeq gene 1434958 1435008 . - . ID=gene1407;Dbxref=EcoGene:EG14435,GeneID:5625564;Name=ttcC;gbkey=Gene;gene=ttcC;gene_biotype=pseudogene;gene_synonym=ECK4447;locus_tag=b4638;pseudo=true NC_000913.3 RefSeq CDS 1434958 1435008 . - 0 ID=cds1361;Parent=gene1407;Dbxref=EcoGene:EG14435,GeneID:5625564;Note=pseudogene%2C prophage Rac integration site ttcA duplication%3BPhage or Prophage Related;gbkey=CDS;gene=ttcC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1435185 1435619 . - . ID=gene1408;Dbxref=EcoGene:EG12674,GeneID:945948;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;gene_synonym=ECK1371,JW1370,ynaF,yzzL;locus_tag=b1376 NC_000913.3 RefSeq CDS 1435185 1435619 . - 0 ID=cds1362;Parent=gene1408;Dbxref=ASAP:ABE-0004605,UniProtKB/Swiss-Prot:P37903,Genbank:NP_415894.4,EcoGene:EG12674,GeneID:945948;Name=NP_415894.4;Note=putative filament protein;gbkey=CDS;gene=uspF;product=stress-induced protein%2C ATP-binding protein;protein_id=NP_415894.4;transl_table=11 NC_000913.3 RefSeq gene 1435760 1436893 . - . ID=gene1409;Dbxref=EcoGene:EG13375,GeneID:946313;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;gene_synonym=ECK1372,JW1371,ynaG;locus_tag=b1377 NC_000913.3 RefSeq CDS 1435760 1436893 . - 0 ID=cds1363;Parent=gene1409;Dbxref=ASAP:ABE-0004608,UniProtKB/Swiss-Prot:P77747,Genbank:NP_415895.1,EcoGene:EG13375,GeneID:946313;Name=NP_415895.1;gbkey=CDS;gene=ompN;product=outer membrane pore protein N%2C non-specific;protein_id=NP_415895.1;transl_table=11 NC_000913.3 RefSeq gene 1437121 1437229 . + . ID=gene1410;Dbxref=EcoGene:EG31144,GeneID:2847713;Name=micC;gbkey=Gene;gene=micC;gene_biotype=antisense_RNA;gene_synonym=ECK1373,IS063,JWR0234,tke8;locus_tag=b4427 NC_000913.3 RefSeq ncRNA 1437121 1437229 . + . ID=rna45;Parent=gene1410;Dbxref=ASAP:ABE-0047248,EcoGene:EG31144,GeneID:2847713;Note=regulatory antisense RNA affecting ompC expression;gbkey=ncRNA;gene=micC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of OmpC translation%2C Hfq-dependent NC_000913.3 RefSeq exon 1437121 1437229 . + . ID=id188;Parent=rna45;Dbxref=ASAP:ABE-0047248,EcoGene:EG31144,GeneID:2847713;Note=regulatory antisense RNA affecting ompC expression;gbkey=ncRNA;gene=micC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of OmpC translation%2C Hfq-dependent NC_000913.3 RefSeq gene 1437260 1440784 . - . ID=gene1411;Dbxref=EcoGene:EG13183,GeneID:946587;Name=pfo;gbkey=Gene;gene=pfo;gene_biotype=protein_coding;gene_synonym=ECK1374,JW1372,nifJ,soi-9,ydbK;locus_tag=b1378 NC_000913.3 RefSeq CDS 1437260 1440784 . - 0 ID=cds1364;Parent=gene1411;Dbxref=ASAP:ABE-0004613,UniProtKB/Swiss-Prot:P52647,Genbank:NP_415896.1,EcoGene:EG13183,GeneID:946587;Name=NP_415896.1;Note=putative oxidoreductase%2C Fe-S subunit;gbkey=CDS;gene=pfo;product=pyruvate-flavodoxin oxidoreductase;protein_id=NP_415896.1;transl_table=11 NC_000913.3 RefSeq gene 1441058 1441324 . + . ID=gene1412;Dbxref=EcoGene:EG13182,GeneID:4056027;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;gene_synonym=ECK1375,JW5215;locus_tag=b4529 NC_000913.3 RefSeq CDS 1441058 1441324 . + 0 ID=cds1365;Parent=gene1412;Dbxref=ASAP:ABE-0285050,UniProtKB/Swiss-Prot:P0ACW2,Genbank:YP_588453.1,EcoGene:EG13182,GeneID:4056027;Name=YP_588453.1;gbkey=CDS;gene=ydbJ;product=DUF333 family putative lipoprotein;protein_id=YP_588453.1;transl_table=11 NC_000913.3 RefSeq gene 1441321 1441743 . - . ID=gene1413;Dbxref=EcoGene:EG13181,GeneID:946525;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;gene_synonym=ECK1376,JW1374,ydbI;locus_tag=b1379 NC_000913.3 RefSeq CDS 1441321 1441743 . - 0 ID=cds1366;Parent=gene1413;Dbxref=ASAP:ABE-0004616,UniProtKB/Swiss-Prot:P52644,Genbank:NP_415897.1,EcoGene:EG13181,GeneID:946525;Name=NP_415897.1;Note=heat shock protein hslJ;gbkey=CDS;gene=hslJ;product=heat-inducible lipoprotein involved in novobiocin resistance;protein_id=NP_415897.1;transl_table=11 NC_000913.3 RefSeq gene 1441854 1442843 . - . ID=gene1414;Dbxref=EcoGene:EG13186,GeneID:946315;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;gene_synonym=ECK1377,hslF,hslI,htpH,JW1375;locus_tag=b1380 NC_000913.3 RefSeq CDS 1441854 1442843 . - 0 ID=cds1367;Parent=gene1414;Dbxref=ASAP:ABE-0004619,UniProtKB/Swiss-Prot:P52643,Genbank:NP_415898.1,EcoGene:EG13186,GeneID:946315;Name=NP_415898.1;gbkey=CDS;gene=ldhA;product=fermentative D-lactate dehydrogenase%2C NAD-dependent;protein_id=NP_415898.1;transl_table=11 NC_000913.3 RefSeq gene 1443051 1445690 . + . ID=gene1415;Dbxref=EcoGene:EG13180,GeneID:945949;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;gene_synonym=ECK1378,JW1376;locus_tag=b1381 NC_000913.3 RefSeq CDS 1443051 1445690 . + 0 ID=cds1368;Parent=gene1415;Dbxref=ASAP:ABE-0004623,UniProtKB/Swiss-Prot:P52645,Genbank:NP_415899.1,EcoGene:EG13180,GeneID:945949;Name=NP_415899.1;gbkey=CDS;gene=ydbH;product=putative membrane-anchored protein%2C function unknown;protein_id=NP_415899.1;transl_table=11 NC_000913.3 RefSeq gene 1445687 1445872 . + . ID=gene1416;Dbxref=EcoGene:EG14298,GeneID:945946;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;gene_synonym=ECK1379,JW1377;locus_tag=b1382 NC_000913.3 RefSeq CDS 1445687 1445872 . + 0 ID=cds1369;Parent=gene1416;Dbxref=ASAP:ABE-0004625,UniProtKB/Swiss-Prot:P64448,Genbank:NP_415900.1,EcoGene:EG14298,GeneID:945946;Name=NP_415900.1;gbkey=CDS;gene=ynbE;product=lipoprotein;protein_id=NP_415900.1;transl_table=11 NC_000913.3 RefSeq gene 1445880 1446206 . + . ID=gene1417;Dbxref=EcoGene:EG13733,GeneID:945943;Name=ydbL;gbkey=Gene;gene=ydbL;gene_biotype=protein_coding;gene_synonym=ECK1380,JW5216;locus_tag=b1383 NC_000913.3 RefSeq CDS 1445880 1446206 . + 0 ID=cds1370;Parent=gene1417;Dbxref=ASAP:ABE-0004627,UniProtKB/Swiss-Prot:P76076,Genbank:NP_415901.2,EcoGene:EG13733,GeneID:945943;Name=NP_415901.2;gbkey=CDS;gene=ydbL;product=DUF1318 family protein;protein_id=NP_415901.2;transl_table=11 NC_000913.3 RefSeq gene 1446378 1447283 . - . ID=gene1418;Dbxref=EcoGene:EG13422,GeneID:945941;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;gene_synonym=ECK1381,JW1379,maoB,maoR,maoX,ydbM;locus_tag=b1384 NC_000913.3 RefSeq CDS 1446378 1447283 . - 0 ID=cds1371;Parent=gene1418;Dbxref=ASAP:ABE-0004630,UniProtKB/Swiss-Prot:Q47129,Genbank:NP_415902.1,EcoGene:EG13422,GeneID:945941;Name=NP_415902.1;Note=regulatory protein for 2-phenylethylamine catabolism;gbkey=CDS;gene=feaR;product=transcriptional activator for tynA and feaB;protein_id=NP_415902.1;transl_table=11 NC_000913.3 RefSeq gene 1447519 1449018 . + . ID=gene1419;Dbxref=EcoGene:EG13179,GeneID:945933;Name=feaB;gbkey=Gene;gene=feaB;gene_biotype=protein_coding;gene_synonym=ECK1382,JW1380,padA,ydbG;locus_tag=b1385 NC_000913.3 RefSeq CDS 1447519 1449018 . + 0 ID=cds1372;Parent=gene1419;Dbxref=ASAP:ABE-0004637,UniProtKB/Swiss-Prot:P80668,Genbank:NP_415903.4,EcoGene:EG13179,GeneID:945933;Name=NP_415903.4;gbkey=CDS;gene=feaB;product=phenylacetaldehyde dehydrogenase;protein_id=NP_415903.4;transl_table=11 NC_000913.3 RefSeq gene 1449076 1451349 . - . ID=gene1420;Dbxref=EcoGene:EG13140,GeneID:945939;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;gene_synonym=ECK1383,JW1381,maoA;locus_tag=b1386 NC_000913.3 RefSeq CDS 1449076 1451349 . - 0 ID=cds1373;Parent=gene1420;Dbxref=ASAP:ABE-0004639,UniProtKB/Swiss-Prot:P46883,Genbank:NP_415904.3,EcoGene:EG13140,GeneID:945939;Name=NP_415904.3;Note=copper amine oxidase (tyramine oxidase);gbkey=CDS;gene=tynA;product=tyramine oxidase%2C copper-requiring;protein_id=NP_415904.3;transl_table=11 NC_000913.3 RefSeq gene 1451597 1453642 . - . ID=gene1421;Dbxref=EcoGene:EG13735,GeneID:945954;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;gene_synonym=ECK1384,JW1382,maoC,tynP?,ydbN;locus_tag=b1387 NC_000913.3 RefSeq CDS 1451597 1453642 . - 0 ID=cds1374;Parent=gene1421;Dbxref=ASAP:ABE-0004644,UniProtKB/Swiss-Prot:P77455,Genbank:NP_415905.1,EcoGene:EG13735,GeneID:945954;Name=NP_415905.1;gbkey=CDS;gene=paaZ;product=oxepin-CoA hydrolase and 3-oxo-5%2C6-dehydrosuberyl-CoA semialdehyde dehydrogenase;protein_id=NP_415905.1;transl_table=11 NC_000913.3 RefSeq gene 1453927 1454856 . + . ID=gene1422;Dbxref=EcoGene:EG13736,GeneID:945833;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;gene_synonym=ECK1385,JW1383,ydbO;locus_tag=b1388 NC_000913.3 RefSeq CDS 1453927 1454856 . + 0 ID=cds1375;Parent=gene1422;Dbxref=ASAP:ABE-0004649,UniProtKB/Swiss-Prot:P76077,Genbank:NP_415906.1,EcoGene:EG13736,GeneID:945833;Name=NP_415906.1;gbkey=CDS;gene=paaA;product=ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=NP_415906.1;transl_table=11 NC_000913.3 RefSeq gene 1454868 1455155 . + . ID=gene1423;Dbxref=EcoGene:EG14299,GeneID:947595;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;gene_synonym=ECK1386,JW1384,ynbF;locus_tag=b1389 NC_000913.3 RefSeq CDS 1454868 1455155 . + 0 ID=cds1376;Parent=gene1423;Dbxref=ASAP:ABE-0004651,UniProtKB/Swiss-Prot:P76078,Genbank:NP_415907.1,EcoGene:EG14299,GeneID:947595;Name=NP_415907.1;gbkey=CDS;gene=paaB;product=putative ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=NP_415907.1;transl_table=11 NC_000913.3 RefSeq gene 1455164 1455910 . + . ID=gene1424;Dbxref=EcoGene:EG13737,GeneID:945956;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;gene_synonym=ECK1387,JW1385,ydbP;locus_tag=b1390 NC_000913.3 RefSeq CDS 1455164 1455910 . + 0 ID=cds1377;Parent=gene1424;Dbxref=ASAP:ABE-0004653,UniProtKB/Swiss-Prot:P76079,Genbank:NP_415908.1,EcoGene:EG13737,GeneID:945956;Name=NP_415908.1;gbkey=CDS;gene=paaC;product=ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=NP_415908.1;transl_table=11 NC_000913.3 RefSeq gene 1455925 1456422 . + . ID=gene1425;Dbxref=EcoGene:EG13738,GeneID:945959;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;gene_synonym=ECK1388,JW5217,ydbQ;locus_tag=b1391 NC_000913.3 RefSeq CDS 1455925 1456422 . + 0 ID=cds1378;Parent=gene1425;Dbxref=ASAP:ABE-0004655,UniProtKB/Swiss-Prot:P76080,Genbank:NP_415909.4,EcoGene:EG13738,GeneID:945959;Name=NP_415909.4;gbkey=CDS;gene=paaD;product=ring 1%2C2-phenylacetyl-CoA epoxidase subunit;protein_id=NP_415909.4;transl_table=11 NC_000913.3 RefSeq gene 1456430 1457500 . + . ID=gene1426;Dbxref=EcoGene:EG13739,GeneID:945962;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;gene_synonym=ECK1389,JW1387,ydbR;locus_tag=b1392 NC_000913.3 RefSeq CDS 1456430 1457500 . + 0 ID=cds1379;Parent=gene1426;Dbxref=ASAP:ABE-0004657,UniProtKB/Swiss-Prot:P76081,Genbank:NP_415910.1,EcoGene:EG13739,GeneID:945962;Name=NP_415910.1;gbkey=CDS;gene=paaE;product=ring 1%2C2-phenylacetyl-CoA epoxidase%2C NAD(P)H oxidoreductase component;protein_id=NP_415910.1;transl_table=11 NC_000913.3 RefSeq gene 1457497 1458264 . + . ID=gene1427;Dbxref=EcoGene:EG13740,GeneID:946011;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;gene_synonym=ECK1390,JW1388,ydbR;locus_tag=b1393 NC_000913.3 RefSeq CDS 1457497 1458264 . + 0 ID=cds1380;Parent=gene1427;Dbxref=ASAP:ABE-0004659,UniProtKB/Swiss-Prot:P76082,Genbank:NP_415911.1,EcoGene:EG13740,GeneID:946011;Name=NP_415911.1;gbkey=CDS;gene=paaF;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=NP_415911.1;transl_table=11 NC_000913.3 RefSeq gene 1458264 1459052 . + . ID=gene1428;Dbxref=EcoGene:EG13741,GeneID:946263;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;gene_synonym=ECK1391,JW1389,ydbT;locus_tag=b1394 NC_000913.3 RefSeq CDS 1458264 1459052 . + 0 ID=cds1381;Parent=gene1428;Dbxref=ASAP:ABE-0004661,UniProtKB/Swiss-Prot:P77467,Genbank:NP_415912.1,EcoGene:EG13741,GeneID:946263;Name=NP_415912.1;gbkey=CDS;gene=paaG;product=1%2C2-epoxyphenylacetyl-CoA isomerase%2C oxepin-CoA-forming;protein_id=NP_415912.1;transl_table=11 NC_000913.3 RefSeq gene 1459054 1460481 . + . ID=gene1429;Dbxref=EcoGene:EG13742,GeneID:945940;Name=paaH;gbkey=Gene;gene=paaH;gene_biotype=protein_coding;gene_synonym=ECK1392,JW1390,ydbU;locus_tag=b1395 NC_000913.3 RefSeq CDS 1459054 1460481 . + 0 ID=cds1382;Parent=gene1429;Dbxref=ASAP:ABE-0004663,UniProtKB/Swiss-Prot:P76083,Genbank:NP_415913.1,EcoGene:EG13742,GeneID:945940;Name=NP_415913.1;gbkey=CDS;gene=paaH;product=3-hydroxyadipyl-CoA dehydrogenase%2C NAD+-dependent;protein_id=NP_415913.1;transl_table=11 NC_000913.3 RefSeq gene 1460471 1460893 . + . ID=gene1430;Dbxref=EcoGene:EG13743,GeneID:945265;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;gene_synonym=ECK1393,JW1391,ydbV;locus_tag=b1396 NC_000913.3 RefSeq CDS 1460471 1460893 . + 0 ID=cds1383;Parent=gene1430;Dbxref=ASAP:ABE-0004666,UniProtKB/Swiss-Prot:P76084,Genbank:NP_415914.1,EcoGene:EG13743,GeneID:945265;Name=NP_415914.1;gbkey=CDS;gene=paaI;product=hydroxyphenylacetyl-CoA thioesterase;protein_id=NP_415914.1;transl_table=11 NC_000913.3 RefSeq gene 1460893 1462098 . + . ID=gene1431;Dbxref=EcoGene:EG13744,GeneID:946121;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;gene_synonym=ECK1394,JW1392,ydbW;locus_tag=b1397 NC_000913.3 RefSeq CDS 1460893 1462098 . + 0 ID=cds1384;Parent=gene1431;Dbxref=ASAP:ABE-0004668,UniProtKB/Swiss-Prot:P0C7L2,Genbank:NP_415915.1,EcoGene:EG13744,GeneID:946121;Name=NP_415915.1;gbkey=CDS;gene=paaJ;product=3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=NP_415915.1;transl_table=11 NC_000913.3 RefSeq gene 1462125 1463438 . + . ID=gene1432;Dbxref=EcoGene:EG13745,GeneID:945963;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;gene_synonym=ECK1395,JW5218;locus_tag=b1398 NC_000913.3 RefSeq CDS 1462125 1463438 . + 0 ID=cds1385;Parent=gene1432;Dbxref=ASAP:ABE-0004671,UniProtKB/Swiss-Prot:P76085,Genbank:NP_415916.1,EcoGene:EG13745,GeneID:945963;Name=NP_415916.1;gbkey=CDS;gene=paaK;product=phenylacetyl-CoA ligase;protein_id=NP_415916.1;transl_table=11 NC_000913.3 RefSeq gene 1463539 1464489 . + . ID=gene1433;Dbxref=EcoGene:EG13746,GeneID:945966;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;gene_synonym=ECK1396,JW1394,ydbY;locus_tag=b1399 NC_000913.3 RefSeq CDS 1463539 1464489 . + 0 ID=cds1386;Parent=gene1433;Dbxref=ASAP:ABE-0004674,UniProtKB/Swiss-Prot:P76086,Genbank:NP_415917.1,EcoGene:EG13746,GeneID:945966;Name=NP_415917.1;gbkey=CDS;gene=paaX;product=transcriptional repressor of phenylacetic acid degradation paa operon%2C phenylacetyl-CoA inducer;protein_id=NP_415917.1;transl_table=11 NC_000913.3 RefSeq gene 1464471 1465061 . + . ID=gene1434;Dbxref=EcoGene:EG13747,GeneID:945965;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;gene_synonym=ECK1397,JW1395,ydbZ;locus_tag=b1400 NC_000913.3 RefSeq CDS 1464471 1465061 . + 0 ID=cds1387;Parent=gene1434;Dbxref=ASAP:ABE-0004676,UniProtKB/Swiss-Prot:P77181,Genbank:NP_415918.1,EcoGene:EG13747,GeneID:945965;Name=NP_415918.1;gbkey=CDS;gene=paaY;product=thioesterase required for phenylacetic acid degradation%3B trimeric%3B phenylacetate regulatory and detoxification protein%3B hexapeptide repeat protein;protein_id=NP_415918.1;transl_table=11 NC_000913.3 RefSeq gene 1465165 1465230 . - . ID=gene1435;Dbxref=EcoGene:EG14479,GeneID:7751614;Name=ynbG;gbkey=Gene;gene=ynbG;gene_biotype=protein_coding;gene_synonym=ECK4489;locus_tag=b4674 NC_000913.3 RefSeq CDS 1465165 1465230 . - 0 ID=cds1388;Parent=gene1435;Dbxref=UniProtKB/Swiss-Prot:C1P600,Genbank:YP_002791240.1,EcoGene:EG14479,GeneID:7751614;Name=YP_002791240.1;gbkey=CDS;gene=ynbG;product=uncharacterized protein;protein_id=YP_002791240.1;transl_table=11 NC_000913.3 RefSeq gene 1465392 1467904 . + . ID=gene1436;Dbxref=EcoGene:EG11307,GeneID:2847750;Name=ydbA;gbkey=Gene;gene=ydbA;gene_biotype=pseudogene;gene_synonym=ECK1398,JW1402,JW5802;locus_tag=b4492;part=1/3;pseudo=true NC_000913.3 RefSeq gene 1469241 1469293 . + . ID=gene1436;Dbxref=EcoGene:EG11307,GeneID:2847750;Name=ydbA;gbkey=Gene;gene=ydbA;gene_biotype=pseudogene;gene_synonym=ECK1398,JW1402,JW5802;locus_tag=b4492;part=2/3;pseudo=true NC_000913.3 RefSeq gene 1470517 1474013 . + . ID=gene1436;Dbxref=EcoGene:EG11307,GeneID:2847750;Name=ydbA;gbkey=Gene;gene=ydbA;gene_biotype=pseudogene;gene_synonym=ECK1398,JW1402,JW5802;locus_tag=b4492;part=3/3;pseudo=true NC_000913.3 RefSeq CDS 1465392 1467904 . + 0 ID=cds1389;Parent=gene1436;Dbxref=ASAP:ABE-0004680,ASAP:ABE-0004694,ASAP:ABE-0285093,UniProtKB/Swiss-Prot:P33666,EcoGene:EG11307,GeneID:2847750;Note=pseudogene%2C autotransporter homolog~interrupted by IS2 and IS30;gbkey=CDS;gene=ydbA;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1469241 1469293 . + 1 ID=cds1389;Parent=gene1436;Dbxref=ASAP:ABE-0004680,ASAP:ABE-0004694,ASAP:ABE-0285093,UniProtKB/Swiss-Prot:P33666,EcoGene:EG11307,GeneID:2847750;Note=pseudogene%2C autotransporter homolog~interrupted by IS2 and IS30;gbkey=CDS;gene=ydbA;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1470517 1474013 . + 2 ID=cds1389;Parent=gene1436;Dbxref=ASAP:ABE-0004680,ASAP:ABE-0004694,ASAP:ABE-0285093,UniProtKB/Swiss-Prot:P33666,EcoGene:EG11307,GeneID:2847750;Note=pseudogene%2C autotransporter homolog~interrupted by IS2 and IS30;gbkey=CDS;gene=ydbA;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 1467910 1469240 . - . ID=id189;gbkey=mobile_element NC_000913.3 RefSeq gene 1467921 1468826 . - . ID=gene1437;Dbxref=EcoGene:EG40004,GeneID:945952;Name=insD1;gbkey=Gene;gene=insD1;gene_biotype=protein_coding;gene_synonym=ECK0358;locus_tag=b1402 NC_000913.3 RefSeq CDS 1467921 1468826 . - 0 ID=cds1390;Parent=gene1437;Dbxref=ASAP:ABE-0004683,UniProtKB/Swiss-Prot:P0CF54,Genbank:NP_415920.1,EcoGene:EG40004,GeneID:945952;Name=NP_415920.1;gbkey=CDS;gene=insD1;product=IS2 transposase TnpB;protein_id=NP_415920.1;transl_table=11 NC_000913.3 RefSeq gene 1468784 1469149 . - . ID=gene1438;Dbxref=EcoGene:EG40003,GeneID:945967;Name=insC1;gbkey=Gene;gene=insC1;gene_biotype=protein_coding;gene_synonym=ECK0357;locus_tag=b1403 NC_000913.3 RefSeq CDS 1468784 1469149 . - 0 ID=cds1391;Parent=gene1438;Dbxref=ASAP:ABE-0004685,UniProtKB/Swiss-Prot:P0CF41,Genbank:NP_415921.2,EcoGene:EG40003,GeneID:945967;Name=NP_415921.2;gbkey=CDS;gene=insC1;product=IS2 repressor TnpA;protein_id=NP_415921.2;transl_table=11 NC_000913.3 RefSeq region 1469296 1470516 . + . ID=id190;gbkey=mobile_element NC_000913.3 RefSeq gene 1469358 1470509 . + . ID=gene1439;Dbxref=EcoGene:EG40009,GeneID:945968;Name=insI1;gbkey=Gene;gene=insI1;gene_biotype=protein_coding;gene_synonym=ECK0258;locus_tag=b1404 NC_000913.3 RefSeq CDS 1469358 1470509 . + 0 ID=cds1392;Parent=gene1439;Dbxref=ASAP:ABE-0004691,UniProtKB/Swiss-Prot:P0CF89,Genbank:NP_415922.1,EcoGene:EG40009,GeneID:945968;Name=NP_415922.1;gbkey=CDS;gene=insI1;product=IS30 transposase;protein_id=NP_415922.1;transl_table=11 NC_000913.3 RefSeq gene 1474221 1475081 . + . ID=gene1440;Dbxref=EcoGene:EG11309,GeneID:945980;Name=ydbC;gbkey=Gene;gene=ydbC;gene_biotype=protein_coding;gene_synonym=ECK1399,JW1403;locus_tag=b1406 NC_000913.3 RefSeq CDS 1474221 1475081 . + 0 ID=cds1393;Parent=gene1440;Dbxref=ASAP:ABE-0004698,UniProtKB/Swiss-Prot:P25906,Genbank:NP_415924.1,EcoGene:EG11309,GeneID:945980;Name=NP_415924.1;Note=putative dehydrogenase;gbkey=CDS;gene=ydbC;product=putative NAD(P)-binding oxidoreductase;protein_id=NP_415924.1;transl_table=11 NC_000913.3 RefSeq gene 1475144 1477450 . + . ID=gene1441;Dbxref=EcoGene:EG11310,GeneID:945983;Name=ydbD;gbkey=Gene;gene=ydbD;gene_biotype=protein_coding;gene_synonym=ECK1400,JW5221;locus_tag=b1407 NC_000913.3 RefSeq CDS 1475144 1477450 . + 0 ID=cds1394;Parent=gene1441;Dbxref=ASAP:ABE-0004701,UniProtKB/Swiss-Prot:P25907,Genbank:NP_415925.2,EcoGene:EG11310,GeneID:945983;Name=NP_415925.2;gbkey=CDS;gene=ydbD;product=PF10971 family putative periplasmic methylglyoxal resistance protein;protein_id=NP_415925.2;transl_table=11 NC_000913.3 RefSeq gene 1477621 1478226 . + . ID=gene1442;Dbxref=EcoGene:EG13748,GeneID:945973;Name=ynbA;gbkey=Gene;gene=ynbA;gene_biotype=protein_coding;gene_synonym=ECK1401,JW1405;locus_tag=b1408 NC_000913.3 RefSeq CDS 1477621 1478226 . + 0 ID=cds1395;Parent=gene1442;Dbxref=ASAP:ABE-0004704,UniProtKB/Swiss-Prot:P76090,Genbank:NP_415926.4,EcoGene:EG13748,GeneID:945973;Name=NP_415926.4;gbkey=CDS;gene=ynbA;product=inner membrane protein;protein_id=NP_415926.4;transl_table=11 NC_000913.3 RefSeq gene 1478226 1479122 . + . ID=gene1443;Dbxref=EcoGene:EG13749,GeneID:945972;Name=ynbB;gbkey=Gene;gene=ynbB;gene_biotype=protein_coding;gene_synonym=ECK1402,JW1406;locus_tag=b1409 NC_000913.3 RefSeq CDS 1478226 1479122 . + 0 ID=cds1396;Parent=gene1443;Dbxref=ASAP:ABE-0004706,UniProtKB/Swiss-Prot:P76091,Genbank:NP_415927.1,EcoGene:EG13749,GeneID:945972;Name=NP_415927.1;Note=putative phosphatidate cytidiltransferase;gbkey=CDS;gene=ynbB;product=putative CDP-diglyceride synthase;protein_id=NP_415927.1;transl_table=11 NC_000913.3 RefSeq gene 1479138 1480895 . + . ID=gene1444;Dbxref=EcoGene:EG13750,GeneID:945970;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;gene_synonym=ECK1403,JW1407;locus_tag=b1410 NC_000913.3 RefSeq CDS 1479138 1480895 . + 0 ID=cds1397;Parent=gene1444;Dbxref=ASAP:ABE-0004708,UniProtKB/Swiss-Prot:P76092,Genbank:NP_415928.1,EcoGene:EG13750,GeneID:945970;Name=NP_415928.1;gbkey=CDS;gene=ynbC;product=putative esterase;protein_id=NP_415928.1;transl_table=11 NC_000913.3 RefSeq gene 1480909 1482201 . + . ID=gene1445;Dbxref=EcoGene:EG13751,GeneID:945985;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;gene_synonym=ECK1404,JW1408;locus_tag=b1411 NC_000913.3 RefSeq CDS 1480909 1482201 . + 0 ID=cds1398;Parent=gene1445;Dbxref=ASAP:ABE-0004710,UniProtKB/Swiss-Prot:P76093,Genbank:NP_415929.1,EcoGene:EG13751,GeneID:945985;Name=NP_415929.1;Note=putative enzymes;gbkey=CDS;gene=ynbD;product=putative phosphatase inner membrane protein;protein_id=NP_415929.1;transl_table=11 NC_000913.3 RefSeq gene 1482255 1482860 . - . ID=gene1446;Dbxref=EcoGene:EG12695,GeneID:947569;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;gene_synonym=acpD,ECK1405,JW1409;locus_tag=b1412 NC_000913.3 RefSeq CDS 1482255 1482860 . - 0 ID=cds1399;Parent=gene1446;Dbxref=ASAP:ABE-0004712,UniProtKB/Swiss-Prot:P41407,Genbank:NP_415930.1,EcoGene:EG12695,GeneID:947569;Name=NP_415930.1;Note=acyl carrier protein phosphodiesterase;gbkey=CDS;gene=azoR;product=NADH-azoreductase%2C FMN-dependent;protein_id=NP_415930.1;transl_table=11 NC_000913.3 RefSeq gene 1483061 1486963 . + . ID=gene1447;Dbxref=EcoGene:EG12936,GeneID:948444;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;gene_synonym=ECK1406,JW5905;locus_tag=b1413 NC_000913.3 RefSeq CDS 1483061 1486963 . + 0 ID=cds1400;Parent=gene1447;Dbxref=ASAP:ABE-0004718,UniProtKB/Swiss-Prot:P43329,Genbank:NP_415931.4,EcoGene:EG12936,GeneID:948444;Name=NP_415931.4;Note=helicase%2C ATP-dependent;gbkey=CDS;gene=hrpA;product=putative ATP-dependent helicase;protein_id=NP_415931.4;transl_table=11 NC_000913.3 RefSeq gene 1487235 1488035 . + . ID=gene1448;Dbxref=EcoGene:EG12110,GeneID:946215;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;gene_synonym=ECK1407,JW1411;locus_tag=b1414 NC_000913.3 RefSeq CDS 1487235 1488035 . + 0 ID=cds1401;Parent=gene1448;Dbxref=ASAP:ABE-0004722,UniProtKB/Swiss-Prot:P34209,Genbank:NP_415932.1,EcoGene:EG12110,GeneID:946215;Name=NP_415932.1;gbkey=CDS;gene=ydcF;product=DUF218 superfamily protein%2C SAM-binding;protein_id=NP_415932.1;transl_table=11 NC_000913.3 RefSeq gene 1488232 1489671 . + . ID=gene1449;Dbxref=EcoGene:EG10035,GeneID:945672;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;gene_synonym=ald,ECK1408,JW1412;locus_tag=b1415 NC_000913.3 RefSeq CDS 1488232 1489671 . + 0 ID=cds1402;Parent=gene1449;Dbxref=ASAP:ABE-0004725,UniProtKB/Swiss-Prot:P25553,Genbank:NP_415933.1,EcoGene:EG10035,GeneID:945672;Name=NP_415933.1;Note=aldehyde dehydrogenase%2C NAD-linked;gbkey=CDS;gene=aldA;product=aldehyde dehydrogenase A%2C NAD-linked;protein_id=NP_415933.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1489683 1489704 . + . ID=id191;Note=REP116 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1489713 1490713 . - . ID=gene1450;Dbxref=EcoGene:EG12103,GeneID:2847738;Name=gapC;gbkey=Gene;gene=gapC;gene_biotype=pseudogene;gene_synonym=ECK1409,JW1413,JW5906;locus_tag=b4493;pseudo=true NC_000913.3 RefSeq CDS 1489964 1490713 . - 0 ID=cds1403;Parent=gene1450;Dbxref=ASAP:ABE-0004727,ASAP:ABE-0004729,ASAP:ABE-0285094,UniProtKB/Swiss-Prot:P33898,EcoGene:EG12103,GeneID:2847738;Note=pseudogene%2C GAP dehydrogenase~glyceraldehyde-3-phosphate dehydrogenase (second fragment);gbkey=CDS;gene=gapC;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1489713 1489964 . - 0 ID=cds1403;Parent=gene1450;Dbxref=ASAP:ABE-0004727,ASAP:ABE-0004729,ASAP:ABE-0285094,UniProtKB/Swiss-Prot:P33898,EcoGene:EG12103,GeneID:2847738;Note=pseudogene%2C GAP dehydrogenase~glyceraldehyde-3-phosphate dehydrogenase (second fragment);gbkey=CDS;gene=gapC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1490902 1491432 . + . ID=gene1451;Dbxref=EcoGene:EG10172,GeneID:947241;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;gene_synonym=ECK1410,JW5224;locus_tag=b1418 NC_000913.3 RefSeq CDS 1490902 1491432 . + 0 ID=cds1404;Parent=gene1451;Dbxref=ASAP:ABE-0004733,UniProtKB/Swiss-Prot:P0ABE5,Genbank:NP_415935.2,EcoGene:EG10172,GeneID:947241;Name=NP_415935.2;gbkey=CDS;gene=cybB;product=cytochrome b561;protein_id=NP_415935.2;transl_table=11 NC_000913.3 RefSeq gene 1491443 1491506 . - . ID=gene1452;Dbxref=EcoGene:EG31168,GeneID:5061508;Name=rydC;gbkey=Gene;gene=rydC;gene_biotype=antisense_RNA;gene_synonym=ECK4407,IS067;locus_tag=b4597 NC_000913.3 RefSeq ncRNA 1491443 1491506 . - . ID=rna46;Parent=gene1452;Dbxref=EcoGene:EG31168,GeneID:5061508;gbkey=ncRNA;gene=rydC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of csgD and yejABEF%2C Hfq-dependent NC_000913.3 RefSeq exon 1491443 1491506 . - . ID=id192;Parent=rna46;Dbxref=EcoGene:EG31168,GeneID:5061508;gbkey=ncRNA;gene=rydC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of csgD and yejABEF%2C Hfq-dependent NC_000913.3 RefSeq gene 1491677 1491850 . + . ID=gene1453;Dbxref=EcoGene:EG11219,GeneID:945986;Name=ydcA;gbkey=Gene;gene=ydcA;gene_biotype=protein_coding;gene_synonym=ECK1411,JW1416;locus_tag=b1419 NC_000913.3 RefSeq CDS 1491677 1491850 . + 0 ID=cds1405;Parent=gene1453;Dbxref=ASAP:ABE-0004736,UniProtKB/Swiss-Prot:P0ACW4,Genbank:NP_415936.1,EcoGene:EG11219,GeneID:945986;Name=NP_415936.1;gbkey=CDS;gene=ydcA;product=putative periplasmic protein;protein_id=NP_415936.1;transl_table=11 NC_000913.3 RefSeq gene 1491922 1492071 . - . ID=gene1454;Dbxref=EcoGene:EG11240,GeneID:2847727;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;gene_synonym=ECK1412,JW5225,ydcB;locus_tag=b4428 NC_000913.3 RefSeq CDS 1491922 1492071 . - 0 ID=cds1406;Parent=gene1454;Dbxref=ASAP:ABE-0047283,UniProtKB/Swiss-Prot:P77494,Genbank:YP_025301.1,EcoGene:EG11240,GeneID:2847727;Name=YP_025301.1;Note=small toxic membrane polypeptide;gbkey=CDS;gene=hokB;product=toxic polypeptide%2C small;protein_id=YP_025301.1;transl_table=11 NC_000913.3 RefSeq gene 1491962 1492129 . - . ID=gene1455;Dbxref=EcoGene:EG20260,GeneID:948820;Name=mokB;gbkey=Gene;gene=mokB;gene_biotype=protein_coding;gene_synonym=ECK1413,JW5882;locus_tag=b1420 NC_000913.3 RefSeq CDS 1491962 1492129 . - 0 ID=cds1407;Parent=gene1455;Dbxref=ASAP:ABE-0004738,UniProtKB/Swiss-Prot:P76096,Genbank:NP_415937.1,EcoGene:EG20260,GeneID:948820;Name=NP_415937.1;Note=regulatory peptide whose translation enables hokB expression;gbkey=CDS;gene=mokB;product=regulatory peptide;protein_id=NP_415937.1;transl_table=11 NC_000913.3 RefSeq gene 1492119 1492174 . + . ID=gene1456;Dbxref=EcoGene:EG31127,GeneID:2847728;Name=sokB;gbkey=Gene;gene=sokB;gene_biotype=antisense_RNA;gene_synonym=ECK1414,JWR0235;locus_tag=b4429 NC_000913.3 RefSeq ncRNA 1492119 1492174 . + . ID=rna47;Parent=gene1456;Dbxref=ASAP:ABE-0047249,EcoGene:EG31127,GeneID:2847728;Note=antisense RNA blocking mokB and hokB translation;gbkey=ncRNA;gene=sokB;ncrna_class=antisense_RNA;product=sRNA antisense regulator blocking mokB%2C and hence hokB%2C translation NC_000913.3 RefSeq exon 1492119 1492174 . + . ID=id193;Parent=rna47;Dbxref=ASAP:ABE-0047249,EcoGene:EG31127,GeneID:2847728;Note=antisense RNA blocking mokB and hokB translation;gbkey=ncRNA;gene=sokB;ncrna_class=antisense_RNA;product=sRNA antisense regulator blocking mokB%2C and hence hokB%2C translation NC_000913.3 RefSeq gene 1492470 1494110 . + . ID=gene1457;Dbxref=EcoGene:EG11018,GeneID:945995;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;gene_synonym=ECK1415,JW1417;locus_tag=b1421 NC_000913.3 RefSeq CDS 1492470 1494110 . + 0 ID=cds1408;Parent=gene1457;Dbxref=ASAP:ABE-0004744,UniProtKB/Swiss-Prot:P05704,Genbank:NP_415938.1,EcoGene:EG11018,GeneID:945995;Name=NP_415938.1;gbkey=CDS;gene=trg;product=methyl-accepting chemotaxis protein III%2C ribose and galactose sensor receptor;protein_id=NP_415938.1;transl_table=11 NC_000913.3 RefSeq gene 1494148 1495071 . - . ID=gene1458;Dbxref=EcoGene:EG13752,GeneID:948865;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;gene_synonym=ECK1416,JW5226;locus_tag=b1422 NC_000913.3 RefSeq CDS 1494148 1495071 . - 0 ID=cds1409;Parent=gene1458;Dbxref=ASAP:ABE-0004746,UniProtKB/Swiss-Prot:P77171,Genbank:NP_415939.2,EcoGene:EG13752,GeneID:948865;Name=NP_415939.2;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ydcI;product=putative DNA-binding transcriptional regulator;protein_id=NP_415939.2;transl_table=11 NC_000913.3 RefSeq gene 1495288 1496631 . + . ID=gene1459;Dbxref=EcoGene:EG13753,GeneID:945991;Name=ydcJ;gbkey=Gene;gene=ydcJ;gene_biotype=protein_coding;gene_synonym=ECK1417,JW1419;locus_tag=b1423 NC_000913.3 RefSeq CDS 1495288 1496631 . + 0 ID=cds1410;Parent=gene1459;Dbxref=ASAP:ABE-0004750,UniProtKB/Swiss-Prot:P76097,Genbank:NP_415940.1,EcoGene:EG13753,GeneID:945991;Name=NP_415940.1;gbkey=CDS;gene=ydcJ;product=putative metalloenzyme;protein_id=NP_415940.1;transl_table=11 NC_000913.3 RefSeq gene 1496856 1498511 . + . ID=gene1460;Dbxref=EcoGene:EG12859,GeneID:945994;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=ECK1418,JW1420,mdoD,ydcG,yzzZ;locus_tag=b1424 NC_000913.3 RefSeq CDS 1496856 1498511 . + 0 ID=cds1411;Parent=gene1460;Dbxref=ASAP:ABE-0004754,UniProtKB/Swiss-Prot:P40120,Genbank:NP_415941.5,EcoGene:EG12859,GeneID:945994;Name=NP_415941.5;Note=putative glycoprotein;gbkey=CDS;gene=opgD;product=OPG biosynthetic periplasmic protein;protein_id=NP_415941.5;transl_table=11 NC_000913.3 RefSeq gene 1498651 1498875 . + . ID=gene1461;Dbxref=EcoGene:EG12865,GeneID:945997;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;gene_synonym=ECK1419,JW5823;locus_tag=b1426 NC_000913.3 RefSeq CDS 1498651 1498875 . + 0 ID=cds1412;Parent=gene1461;Dbxref=ASAP:ABE-0004761,UniProtKB/Swiss-Prot:P0ACW6,Genbank:NP_415943.4,EcoGene:EG12865,GeneID:945997;Name=NP_415943.4;gbkey=CDS;gene=ydcH;product=DUF465 family protein;protein_id=NP_415943.4;transl_table=11 NC_000913.3 RefSeq gene 1498938 1499477 . + . ID=gene1462;Dbxref=EcoGene:EG10853,GeneID:945998;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;gene_synonym=ECK1420,JW1423;locus_tag=b1427 NC_000913.3 RefSeq CDS 1498938 1499477 . + 0 ID=cds1413;Parent=gene1462;Dbxref=ASAP:ABE-0004763,UniProtKB/Swiss-Prot:P13857,Genbank:NP_415944.1,EcoGene:EG10853,GeneID:945998;Name=NP_415944.1;Note=ribosomal-protein-serine acetyltransferase;gbkey=CDS;gene=rimL;product=ribosomal-protein-L7/L12-serine acetyltransferase;protein_id=NP_415944.1;transl_table=11 NC_000913.3 RefSeq gene 1499469 1500449 . - . ID=gene1463;Dbxref=EcoGene:EG13754,GeneID:944932;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;gene_synonym=ECK1421,JW1424;locus_tag=b1428 NC_000913.3 RefSeq CDS 1499469 1500449 . - 0 ID=cds1414;Parent=gene1463;Dbxref=ASAP:ABE-0004765,UniProtKB/Swiss-Prot:P76100,Genbank:NP_415945.1,EcoGene:EG13754,GeneID:944932;Name=NP_415945.1;gbkey=CDS;gene=ydcK;product=uncharacterized protein;protein_id=NP_415945.1;transl_table=11 NC_000913.3 RefSeq gene 1500573 1501565 . + . ID=gene1464;Dbxref=EcoGene:EG11883,GeneID:945852;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;gene_synonym=ECK1422,JW1425;locus_tag=b1429 NC_000913.3 RefSeq CDS 1500573 1501565 . + 0 ID=cds1415;Parent=gene1464;Dbxref=ASAP:ABE-0004770,UniProtKB/Swiss-Prot:P25396,Genbank:NP_415946.1,EcoGene:EG11883,GeneID:945852;Name=NP_415946.1;gbkey=CDS;gene=tehA;product=potassium-tellurite ethidium and proflavin transporter;protein_id=NP_415946.1;transl_table=11 NC_000913.3 RefSeq gene 1501562 1502155 . + . ID=gene1465;Dbxref=EcoGene:EG11884,GeneID:945979;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;gene_synonym=ECK1423,JW1426;locus_tag=b1430 NC_000913.3 RefSeq CDS 1501562 1502155 . + 0 ID=cds1416;Parent=gene1465;Dbxref=ASAP:ABE-0004772,UniProtKB/Swiss-Prot:P25397,Genbank:NP_415947.1,EcoGene:EG11884,GeneID:945979;Name=NP_415947.1;gbkey=CDS;gene=tehB;product=tellurite%2C selenium methyltransferase%2C SAM-dependent%3B tellurite%2C selenium resistance protein;protein_id=NP_415947.1;transl_table=11 NC_000913.3 RefSeq gene 1502457 1503125 . + . ID=gene1466;Dbxref=EcoGene:EG13755,GeneID:948203;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;gene_synonym=ECK1424,JW1427;locus_tag=b1431 NC_000913.3 RefSeq CDS 1502457 1503125 . + 0 ID=cds1417;Parent=gene1466;Dbxref=ASAP:ABE-0004775,UniProtKB/Swiss-Prot:P64451,Genbank:NP_415948.1,EcoGene:EG13755,GeneID:948203;Name=NP_415948.1;gbkey=CDS;gene=ydcL;product=lipoprotein;protein_id=NP_415948.1;transl_table=11 NC_000913.3 RefSeq region 1503161 1504908 . + . ID=id194;gbkey=mobile_element NC_000913.3 RefSeq gene 1503218 1503649 . - . ID=gene1467;Dbxref=EcoGene:EG14359,GeneID:4056028;Name=insP;gbkey=Gene;gene=insP;gene_biotype=pseudogene;gene_synonym=ECK1425,JW5227,JW5961,orf1,orfA,tnpA,yncK;locus_tag=b4578;pseudo=true NC_000913.3 RefSeq CDS 1503218 1503649 . - 0 ID=cds1418;Parent=gene1467;Dbxref=ASAP:ABE-0285051,ASAP:ABE-0285052,ASAP:ABE-0285110,EcoGene:EG14359,GeneID:4056028;Note=pseudogene%2C IS609 transposase A%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insP;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1503717 1504865 . + . ID=gene1468;Dbxref=EcoGene:EG13756,GeneID:944942;Name=insQ;gbkey=Gene;gene=insQ;gene_biotype=protein_coding;gene_synonym=ECK1426,JW5228,orf2,orfB,tnpB,ydcM;locus_tag=b1432 NC_000913.3 RefSeq CDS 1503717 1504865 . + 0 ID=cds1419;Parent=gene1468;Dbxref=ASAP:ABE-0004778,UniProtKB/Swiss-Prot:P76102,Genbank:NP_415949.2,EcoGene:EG13756,GeneID:944942;Name=NP_415949.2;gbkey=CDS;gene=insQ;product=IS609 transposase B;protein_id=NP_415949.2;transl_table=11 NC_000913.3 RefSeq gene 1504905 1506080 . - . ID=gene1469;Dbxref=EcoGene:EG13758,GeneID:947247;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;gene_synonym=ECK1427,JW5229;locus_tag=b1433 NC_000913.3 RefSeq CDS 1504905 1506080 . - 0 ID=cds1420;Parent=gene1469;Dbxref=ASAP:ABE-0004780,UniProtKB/Swiss-Prot:P76103,Genbank:NP_415950.4,EcoGene:EG13758,GeneID:947247;Name=NP_415950.4;Note=putative membrane transport protein;gbkey=CDS;gene=ydcO;product=BenE family inner membrane putative transporter;protein_id=NP_415950.4;transl_table=11 NC_000913.3 RefSeq gene 1506172 1506708 . + . ID=gene1470;Dbxref=EcoGene:EG13757,GeneID:946000;Name=ydcN;gbkey=Gene;gene=ydcN;gene_biotype=protein_coding;gene_synonym=ECK1428,JW1430;locus_tag=b1434 NC_000913.3 RefSeq CDS 1506172 1506708 . + 0 ID=cds1421;Parent=gene1470;Dbxref=ASAP:ABE-0004783,UniProtKB/Swiss-Prot:P77626,Genbank:NP_415951.1,EcoGene:EG13757,GeneID:946000;Name=NP_415951.1;gbkey=CDS;gene=ydcN;product=putative DNA-binding transcriptional regulator;protein_id=NP_415951.1;transl_table=11 NC_000913.3 RefSeq gene 1506781 1508742 . + . ID=gene1471;Dbxref=EcoGene:EG13759,GeneID:945993;Name=ydcP;gbkey=Gene;gene=ydcP;gene_biotype=protein_coding;gene_synonym=ECK1429,JW1431;locus_tag=b1435 NC_000913.3 RefSeq CDS 1506781 1508742 . + 0 ID=cds1422;Parent=gene1471;Dbxref=ASAP:ABE-0004786,UniProtKB/Swiss-Prot:P76104,Genbank:NP_415952.2,EcoGene:EG13759,GeneID:945993;Name=NP_415952.2;Note=putative protease;gbkey=CDS;gene=ydcP;product=putative peptidase;protein_id=NP_415952.2;transl_table=11 NC_000913.3 RefSeq repeat_region 1508791 1508823 . + . ID=id195;Note=REP117 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1508834 1509064 . - . ID=gene1472;Dbxref=EcoGene:EG14300,GeneID:945990;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;gene_synonym=ECK1430,JW1432;locus_tag=b1436 NC_000913.3 RefSeq CDS 1508834 1509064 . - 0 ID=cds1423;Parent=gene1472;Dbxref=ASAP:ABE-0004789,UniProtKB/Swiss-Prot:P64459,Genbank:NP_415953.1,EcoGene:EG14300,GeneID:945990;Name=NP_415953.1;gbkey=CDS;gene=yncJ;product=uncharacterized protein;protein_id=NP_415953.1;transl_table=11 NC_000913.3 RefSeq gene 1509286 1509462 . + . ID=gene1473;Dbxref=EcoGene:EG14421,GeneID:945989;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;gene_synonym=ECK1431,JW5230,yncN;locus_tag=b4532 NC_000913.3 RefSeq CDS 1509286 1509462 . + 0 ID=cds1424;Parent=gene1473;Dbxref=ASAP:ABE-0285053,UniProtKB/Swiss-Prot:P76106,Genbank:NP_415954.2,EcoGene:EG14421,GeneID:945989;Name=NP_415954.2;gbkey=CDS;gene=hicA;product=mRNA interferase toxin of the HicAB toxin-antitoxin system;protein_id=NP_415954.2;transl_table=11 NC_000913.3 RefSeq gene 1509508 1509924 . + . ID=gene1474;Dbxref=EcoGene:EG13760,GeneID:946001;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;gene_synonym=ECK1432,JW1433,ydcQ;locus_tag=b1438 NC_000913.3 RefSeq CDS 1509508 1509924 . + 0 ID=cds1425;Parent=gene1474;Dbxref=ASAP:ABE-0004796,UniProtKB/Swiss-Prot:P67697,Genbank:NP_415955.2,EcoGene:EG13760,GeneID:946001;Name=NP_415955.2;gbkey=CDS;gene=hicB;product=antitoxin for the HicAB toxin-antitoxin system;protein_id=NP_415955.2;transl_table=11 NC_000913.3 RefSeq gene 1510003 1511409 . + . ID=gene1475;Dbxref=EcoGene:EG13761,GeneID:946004;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;gene_synonym=ECK1433,JW1434;locus_tag=b1439 NC_000913.3 RefSeq CDS 1510003 1511409 . + 0 ID=cds1426;Parent=gene1475;Dbxref=ASAP:ABE-0004800,UniProtKB/Swiss-Prot:P77730,Genbank:NP_415956.1,EcoGene:EG13761,GeneID:946004;Name=NP_415956.1;Note=multi modular%3B putative transcriptional regulator%3B also putative ATP-binding component of a transport system;gbkey=CDS;gene=ydcR;product=putative DNA-binding transcriptional regulator and putative aminotransferase;protein_id=NP_415956.1;transl_table=11 NC_000913.3 RefSeq gene 1511654 1512799 . + . ID=gene1476;Dbxref=EcoGene:EG13762,GeneID:946005;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;gene_synonym=ECK1434,JW1435;locus_tag=b1440 NC_000913.3 RefSeq CDS 1511654 1512799 . + 0 ID=cds1427;Parent=gene1476;Dbxref=ASAP:ABE-0004803,UniProtKB/Swiss-Prot:P76108,Genbank:NP_415957.1,EcoGene:EG13762,GeneID:946005;Name=NP_415957.1;Note=periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=ydcS;product=putative ABC transporter periplasmic binding protein;protein_id=NP_415957.1;transl_table=11 NC_000913.3 RefSeq gene 1512817 1513830 . + . ID=gene1477;Dbxref=EcoGene:EG13763,GeneID:946007;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;gene_synonym=ECK1435,JW1436;locus_tag=b1441 NC_000913.3 RefSeq CDS 1512817 1513830 . + 0 ID=cds1428;Parent=gene1477;Dbxref=ASAP:ABE-0004805,UniProtKB/Swiss-Prot:P77795,Genbank:NP_415958.1,EcoGene:EG13763,GeneID:946007;Name=NP_415958.1;Note=ATP-binding component of ABC superfamily;gbkey=CDS;gene=ydcT;product=putative ABC transporter ATPase;protein_id=NP_415958.1;transl_table=11 NC_000913.3 RefSeq gene 1513831 1514772 . + . ID=gene1478;Dbxref=EcoGene:EG13764,GeneID:945976;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;gene_synonym=ECK1436,JW1437;locus_tag=b1442 NC_000913.3 RefSeq CDS 1513831 1514772 . + 0 ID=cds1429;Parent=gene1478;Dbxref=ASAP:ABE-0004807,UniProtKB/Swiss-Prot:P77156,Genbank:NP_415959.1,EcoGene:EG13764,GeneID:945976;Name=NP_415959.1;Note=membrane component of ABC superfamily;gbkey=CDS;gene=ydcU;product=putative ABC transporter permease;protein_id=NP_415959.1;transl_table=11 NC_000913.3 RefSeq gene 1514762 1515556 . + . ID=gene1479;Dbxref=EcoGene:EG13765,GeneID:945903;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;gene_synonym=ECK1437,JW1438;locus_tag=b1443 NC_000913.3 RefSeq CDS 1514762 1515556 . + 0 ID=cds1430;Parent=gene1479;Dbxref=ASAP:ABE-0004809,UniProtKB/Swiss-Prot:P0AFR9,Genbank:NP_415960.1,EcoGene:EG13765,GeneID:945903;Name=NP_415960.1;Note=membrane component of ABC superfamily;gbkey=CDS;gene=ydcV;product=putative ABC transporter permease;protein_id=NP_415960.1;transl_table=11 NC_000913.3 RefSeq gene 1515578 1517002 . + . ID=gene1480;Dbxref=EcoGene:EG13766,GeneID:945876;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;gene_synonym=ECK1438,JW1439,prr,ydcW;locus_tag=b1444 NC_000913.3 RefSeq CDS 1515578 1517002 . + 0 ID=cds1431;Parent=gene1480;Dbxref=ASAP:ABE-0004813,UniProtKB/Swiss-Prot:P77674,Genbank:NP_415961.1,EcoGene:EG13766,GeneID:945876;Name=NP_415961.1;Note=putative aldehyde dehydrogenase;gbkey=CDS;gene=patD;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=NP_415961.1;transl_table=11 NC_000913.3 RefSeq gene 1517099 1517194 . - . ID=gene1481;Dbxref=EcoGene:EG14394,GeneID:5061503;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;gene_synonym=ECK4408;locus_tag=b4598 NC_000913.3 RefSeq CDS 1517099 1517194 . - 0 ID=cds1432;Parent=gene1481;Dbxref=UniProtKB/Swiss-Prot:A5A615,Genbank:YP_001165318.1,EcoGene:EG14394,GeneID:5061503;Name=YP_001165318.1;gbkey=CDS;gene=yncL;product=stress-induced small inner membrane enterobacterial protein;protein_id=YP_001165318.1;transl_table=11 NC_000913.3 RefSeq gene 1517389 1517562 . + . ID=gene1482;Dbxref=EcoGene:EG13767,GeneID:945936;Name=ydcX;gbkey=Gene;gene=ydcX;gene_biotype=protein_coding;gene_synonym=ECK1439,JW5232;locus_tag=b1445 NC_000913.3 RefSeq CDS 1517389 1517562 . + 0 ID=cds1433;Parent=gene1482;Dbxref=ASAP:ABE-0004818,UniProtKB/Swiss-Prot:P64453,Genbank:NP_415962.2,EcoGene:EG13767,GeneID:945936;Name=NP_415962.2;gbkey=CDS;gene=ydcX;product=DUF2566 family protein;protein_id=NP_415962.2;transl_table=11 NC_000913.3 RefSeq gene 1517648 1517881 . + . ID=gene1483;Dbxref=EcoGene:EG13768,GeneID:945916;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;gene_synonym=ECK1440,JW1441;locus_tag=b1446 NC_000913.3 RefSeq CDS 1517648 1517881 . + 0 ID=cds1434;Parent=gene1483;Dbxref=ASAP:ABE-0004821,UniProtKB/Swiss-Prot:P64455,Genbank:NP_415963.1,EcoGene:EG13768,GeneID:945916;Name=NP_415963.1;gbkey=CDS;gene=ydcY;product=DUF2526 family protein;protein_id=NP_415963.1;transl_table=11 NC_000913.3 RefSeq gene 1517882 1518331 . - . ID=gene1484;Dbxref=EcoGene:EG13769,GeneID:946008;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;gene_synonym=ECK1441,JW1442;locus_tag=b1447 NC_000913.3 RefSeq CDS 1517882 1518331 . - 0 ID=cds1435;Parent=gene1484;Dbxref=ASAP:ABE-0004823,UniProtKB/Swiss-Prot:P76111,Genbank:NP_415964.1,EcoGene:EG13769,GeneID:946008;Name=NP_415964.1;gbkey=CDS;gene=ydcZ;product=DUF606 family inner membrane protein;protein_id=NP_415964.1;transl_table=11 NC_000913.3 RefSeq gene 1518328 1518846 . - . ID=gene1485;Dbxref=EcoGene:EG13770,GeneID:946010;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;gene_synonym=ECK1442,JW5233,yncA;locus_tag=b1448 NC_000913.3 RefSeq CDS 1518328 1518846 . - 0 ID=cds1436;Parent=gene1485;Dbxref=ASAP:ABE-0004827,UniProtKB/Swiss-Prot:P76112,Genbank:NP_415965.1,EcoGene:EG13770,GeneID:946010;Name=NP_415965.1;gbkey=CDS;gene=mnaT;product=methionine N-acyltransferase%3B L-amino acid N-acyltransferase;protein_id=NP_415965.1;transl_table=11 NC_000913.3 RefSeq gene 1519027 1520064 . + . ID=gene1486;Dbxref=EcoGene:EG13772,GeneID:946012;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;gene_synonym=ECK1443,JW5907,yncB;locus_tag=b1449 NC_000913.3 RefSeq CDS 1519027 1520064 . + 0 ID=cds1437;Parent=gene1486;Dbxref=ASAP:ABE-0004834,UniProtKB/Swiss-Prot:P76113,Genbank:NP_415966.6,EcoGene:EG13772,GeneID:946012;Name=NP_415966.6;Note=putative oxidoreductase;gbkey=CDS;gene=curA;product=curcumin/dihydrocurcumin reductase%2C NADPH-dependent;protein_id=NP_415966.6;transl_table=11 NC_000913.3 RefSeq gene 1520262 1520927 . + . ID=gene1487;Dbxref=EcoGene:EG13773,GeneID:946014;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;gene_synonym=ECK1444,JW1445,yncC;locus_tag=b1450 NC_000913.3 RefSeq CDS 1520262 1520927 . + 0 ID=cds1438;Parent=gene1487;Dbxref=ASAP:ABE-0004837,UniProtKB/Swiss-Prot:P76114,Genbank:NP_415967.2,EcoGene:EG13773,GeneID:946014;Name=NP_415967.2;gbkey=CDS;gene=mcbR;product=colanic acid and biofilm gene transcriptional regulator%2C MqsR-controlled;protein_id=NP_415967.2;transl_table=11 NC_000913.3 RefSeq gene 1520963 1523065 . - . ID=gene1488;Dbxref=EcoGene:EG13774,GeneID:946015;Name=yncD;gbkey=Gene;gene=yncD;gene_biotype=protein_coding;gene_synonym=ECK1445,JW1446;locus_tag=b1451 NC_000913.3 RefSeq CDS 1520963 1523065 . - 0 ID=cds1439;Parent=gene1488;Dbxref=ASAP:ABE-0004839,UniProtKB/Swiss-Prot:P76115,Genbank:NP_415968.1,EcoGene:EG13774,GeneID:946015;Name=NP_415968.1;gbkey=CDS;gene=yncD;product=putative iron outer membrane transporter;protein_id=NP_415968.1;transl_table=11 NC_000913.3 RefSeq gene 1523307 1524368 . + . ID=gene1489;Dbxref=EcoGene:EG13775,GeneID:946006;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;gene_synonym=ECK1446,JW1447;locus_tag=b1452 NC_000913.3 RefSeq CDS 1523307 1524368 . + 0 ID=cds1440;Parent=gene1489;Dbxref=ASAP:ABE-0004843,UniProtKB/Swiss-Prot:P76116,Genbank:NP_415969.1,EcoGene:EG13775,GeneID:946006;Name=NP_415969.1;Note=putative receptor;gbkey=CDS;gene=yncE;product=ATP-binding protein%2C periplasmic%2C function unknown;protein_id=NP_415969.1;transl_table=11 NC_000913.3 RefSeq gene 1524481 1525980 . - . ID=gene1490;Dbxref=EcoGene:EG13776,GeneID:946019;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;gene_synonym=ECK1447,JW5234,yncF;locus_tag=b1453 NC_000913.3 RefSeq CDS 1524481 1525980 . - 0 ID=cds1441;Parent=gene1490;Dbxref=ASAP:ABE-0004845,UniProtKB/Swiss-Prot:P77610,Genbank:NP_415970.4,EcoGene:EG13776,GeneID:946019;Name=NP_415970.4;Note=L-asparagine permease;gbkey=CDS;gene=ansP;product=L-asparagine transporter;protein_id=NP_415970.4;transl_table=11 NC_000913.3 RefSeq gene 1526247 1526864 . + . ID=gene1491;Dbxref=EcoGene:EG13777,GeneID:946023;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;gene_synonym=ECK1448,JW1449;locus_tag=b1454 NC_000913.3 RefSeq CDS 1526247 1526864 . + 0 ID=cds1442;Parent=gene1491;Dbxref=ASAP:ABE-0004851,UniProtKB/Swiss-Prot:P76117,Genbank:NP_415971.1,EcoGene:EG13777,GeneID:946023;Name=NP_415971.1;gbkey=CDS;gene=yncG;product=glutathione S-transferase homolog;protein_id=NP_415971.1;transl_table=11 NC_000913.3 RefSeq gene 1526940 1527152 . + . ID=gene1492;Dbxref=EcoGene:EG13778,GeneID:946024;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;gene_synonym=ECK1449,JW5235;locus_tag=b1455 NC_000913.3 RefSeq CDS 1526940 1527152 . + 0 ID=cds1443;Parent=gene1492;Dbxref=ASAP:ABE-0004855,UniProtKB/Swiss-Prot:P76118,Genbank:NP_415972.1,EcoGene:EG13778,GeneID:946024;Name=NP_415972.1;gbkey=CDS;gene=yncH;product=IPR020099 family protein;protein_id=NP_415972.1;transl_table=11 NC_000913.3 RefSeq gene 1527902 1529938 . + . ID=gene1493;Dbxref=EcoGene:EG10010,GeneID:946026;Name=rhsE;gbkey=Gene;gene=rhsE;gene_biotype=pseudogene;gene_synonym=ECK1450,JW1451;locus_tag=b1456;pseudo=true NC_000913.3 RefSeq CDS 1527902 1529938 . + 0 ID=cds1444;Parent=gene1493;Dbxref=ASAP:ABE-0004858,UniProtKB/Swiss-Prot:P24211,EcoGene:EG10010,GeneID:946026;Note=pseudogene%2C Rhs family;gbkey=CDS;gene=rhsE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1529922 1530404 . + . ID=gene1494;Dbxref=EcoGene:EG11760,GeneID:946958;Name=ydcD;gbkey=Gene;gene=ydcD;gene_biotype=protein_coding;gene_synonym=ECK1451,JW1452;locus_tag=b1457 NC_000913.3 RefSeq CDS 1529922 1530404 . + 0 ID=cds1445;Parent=gene1494;Dbxref=ASAP:ABE-0004861,UniProtKB/Swiss-Prot:P31991,Genbank:NP_415974.1,EcoGene:EG11760,GeneID:946958;Name=NP_415974.1;gbkey=CDS;gene=ydcD;product=putative immunity protein for RhsE;protein_id=NP_415974.1;transl_table=11 NC_000913.3 RefSeq gene 1530586 1531639 . + . ID=gene1495;Dbxref=EcoGene:EG14258,GeneID:945121;Name=yncI;gbkey=Gene;gene=yncI;gene_biotype=pseudogene;gene_synonym=ECK1452,JW1453,yncM;locus_tag=b1459;pseudo=true NC_000913.3 RefSeq CDS 1530586 1531323 . + 0 ID=cds1446;Parent=gene1495;Dbxref=ASAP:ABE-0004865,ASAP:ABE-0004868,UniProtKB/Swiss-Prot:P76119,EcoGene:EG14258,GeneID:945121;Note=pseudogene;gbkey=CDS;gene=yncI;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1531325 1531639 . + 0 ID=cds1446;Parent=gene1495;Dbxref=ASAP:ABE-0004865,ASAP:ABE-0004868,UniProtKB/Swiss-Prot:P76119,EcoGene:EG14258,GeneID:945121;Note=pseudogene;gbkey=CDS;gene=yncI;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1531816 1532952 . + . ID=gene1496;Dbxref=EcoGene:EG11526,GeneID:947435;Name=ydcC;gbkey=Gene;gene=ydcC;gene_biotype=protein_coding;gene_synonym=ECK1454,JW1455;locus_tag=b1460 NC_000913.3 RefSeq CDS 1531816 1532952 . + 0 ID=cds1447;Parent=gene1496;Dbxref=ASAP:ABE-0004872,UniProtKB/Swiss-Prot:P28917,Genbank:NP_415977.1,EcoGene:EG11526,GeneID:947435;Name=NP_415977.1;Note=H repeat-associated protein (ORF-H);gbkey=CDS;gene=ydcC;product=H repeat-associated putative transposase;protein_id=NP_415977.1;transl_table=11 NC_000913.3 RefSeq gene 1533052 1533285 . + . ID=gene1497;Dbxref=EcoGene:EG11761,GeneID:945731;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;gene_synonym=ECK1455,JW1456,ydcE;locus_tag=b1461 NC_000913.3 RefSeq CDS 1533052 1533285 . + 0 ID=cds1448;Parent=gene1497;Dbxref=ASAP:ABE-0004875,UniProtKB/Swiss-Prot:P31992,Genbank:NP_415978.1,EcoGene:EG11761,GeneID:945731;Name=NP_415978.1;gbkey=CDS;gene=pptA;product=4-oxalocrotonate tautomerase;protein_id=NP_415978.1;transl_table=11 NC_000913.3 RefSeq gene 1533282 1533851 . - . ID=gene1498;Dbxref=EcoGene:EG13779,GeneID:946192;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;gene_synonym=ECK1456,JW1457;locus_tag=b1462 NC_000913.3 RefSeq CDS 1533282 1533851 . - 0 ID=cds1449;Parent=gene1498;Dbxref=ASAP:ABE-0004877,UniProtKB/Swiss-Prot:P76121,Genbank:NP_415979.2,EcoGene:EG13779,GeneID:946192;Name=NP_415979.2;gbkey=CDS;gene=yddH;product=flavin reductase like-protein;protein_id=NP_415979.2;transl_table=11 NC_000913.3 RefSeq gene 1534024 1534869 . + . ID=gene1499;Dbxref=EcoGene:EG13780,GeneID:947251;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;gene_synonym=ECK1457,JW1458,yddI;locus_tag=b1463 NC_000913.3 RefSeq CDS 1534024 1534869 . + 0 ID=cds1450;Parent=gene1499;Dbxref=ASAP:ABE-0004882,UniProtKB/Swiss-Prot:P77567,Genbank:NP_415980.1,EcoGene:EG13780,GeneID:947251;Name=NP_415980.1;gbkey=CDS;gene=nhoA;product=N-hydroxyarylamine O-acetyltransferase;protein_id=NP_415980.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1534883 1534957 . + . ID=id196;Note=REP118 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1534965 1535858 . - . ID=gene1500;Dbxref=EcoGene:EG11825,GeneID:944782;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;gene_synonym=ECK1458,JW1459;locus_tag=b1464 NC_000913.3 RefSeq CDS 1534965 1535858 . - 0 ID=cds1451;Parent=gene1500;Dbxref=ASAP:ABE-0004886,UniProtKB/Swiss-Prot:P37757,Genbank:NP_415981.1,EcoGene:EG11825,GeneID:944782;Name=NP_415981.1;gbkey=CDS;gene=yddE;product=PhzC-PhzF family protein;protein_id=NP_415981.1;transl_table=11 NC_000913.3 RefSeq gene 1535937 1536617 . - . ID=gene1501;Dbxref=EcoGene:EG10644,GeneID:946029;Name=narV;gbkey=Gene;gene=narV;gene_biotype=protein_coding;gene_synonym=chlZ,ECK1459,JW1460;locus_tag=b1465 NC_000913.3 RefSeq CDS 1535937 1536617 . - 0 ID=cds1452;Parent=gene1501;Dbxref=ASAP:ABE-0004889,UniProtKB/Swiss-Prot:P0AF32,Genbank:NP_415982.1,EcoGene:EG10644,GeneID:946029;Name=NP_415982.1;gbkey=CDS;gene=narV;product=nitrate reductase 2 (NRZ)%2C gamma subunit;protein_id=NP_415982.1;transl_table=11 NC_000913.3 RefSeq gene 1536614 1537309 . - . ID=gene1502;Dbxref=EcoGene:EG10645,GeneID:946032;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;gene_synonym=chlZ,ECK1460,JW1461;locus_tag=b1466 NC_000913.3 RefSeq CDS 1536614 1537309 . - 0 ID=cds1453;Parent=gene1502;Dbxref=ASAP:ABE-0004892,UniProtKB/Swiss-Prot:P19317,Genbank:NP_415983.1,EcoGene:EG10645,GeneID:946032;Name=NP_415983.1;gbkey=CDS;gene=narW;product=nitrate reductase 2 (NRZ)%2C delta subunit (assembly subunit);protein_id=NP_415983.1;transl_table=11 NC_000913.3 RefSeq gene 1537309 1538853 . - . ID=gene1503;Dbxref=EcoGene:EG10647,GeneID:946034;Name=narY;gbkey=Gene;gene=narY;gene_biotype=protein_coding;gene_synonym=chlZ,ECK1461,JW1462;locus_tag=b1467 NC_000913.3 RefSeq CDS 1537309 1538853 . - 0 ID=cds1454;Parent=gene1503;Dbxref=ASAP:ABE-0004896,UniProtKB/Swiss-Prot:P19318,Genbank:NP_415984.1,EcoGene:EG10647,GeneID:946034;Name=NP_415984.1;gbkey=CDS;gene=narY;product=nitrate reductase 2 (NRZ)%2C beta subunit;protein_id=NP_415984.1;transl_table=11 NC_000913.3 RefSeq gene 1538850 1542590 . - . ID=gene1504;Dbxref=EcoGene:EG10648,GeneID:945999;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;gene_synonym=chlZ,ECK1462,JW1463;locus_tag=b1468 NC_000913.3 RefSeq CDS 1538850 1542590 . - 0 ID=cds1455;Parent=gene1504;Dbxref=ASAP:ABE-0004898,UniProtKB/Swiss-Prot:P19319,Genbank:NP_415985.1,EcoGene:EG10648,GeneID:945999;Name=NP_415985.1;gbkey=CDS;gene=narZ;product=nitrate reductase 2 (NRZ)%2C alpha subunit;protein_id=NP_415985.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1542634 1542662 . + . ID=id197;Note=REP119 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1542672 1544060 . - . ID=gene1505;Dbxref=EcoGene:EG12153,GeneID:945799;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;gene_synonym=ECK1463,JW1464,yddF;locus_tag=b1469 NC_000913.3 RefSeq CDS 1542672 1544060 . - 0 ID=cds1456;Parent=gene1505;Dbxref=ASAP:ABE-0004901,UniProtKB/Swiss-Prot:P37758,Genbank:NP_415986.1,EcoGene:EG12153,GeneID:945799;Name=NP_415986.1;Note=nitrite extrusion protein 2;gbkey=CDS;gene=narU;product=nitrate/nitrite transporter;protein_id=NP_415986.1;transl_table=11 NC_000913.3 RefSeq gene 1544384 1545714 . - . ID=gene1506;Dbxref=EcoGene:EG13782,GeneID:947312;Name=yddK;gbkey=Gene;gene=yddK;gene_biotype=pseudogene;gene_synonym=ECK1465,JW1467,yddJ;locus_tag=b1471;pseudo=true NC_000913.3 RefSeq CDS 1544764 1545714 . - 0 ID=cds1457;Parent=gene1506;Dbxref=ASAP:ABE-0004906,UniProtKB/Swiss-Prot:P76123,EcoGene:EG13782,GeneID:947312;Note=pseudogene%2C leucine-rich protein~putative glycoportein;gbkey=CDS;gene=yddK;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1544384 1544764 . - 0 ID=cds1457;Parent=gene1506;Dbxref=ASAP:ABE-0004906,UniProtKB/Swiss-Prot:P76123,EcoGene:EG13782,GeneID:947312;Note=pseudogene%2C leucine-rich protein~putative glycoportein;gbkey=CDS;gene=yddK;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1545750 1546028 . - . ID=gene1507;Dbxref=EcoGene:EG13783,GeneID:945737;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;gene_synonym=ECK1466,JW1468;locus_tag=b1472;pseudo=true NC_000913.3 RefSeq CDS 1545750 1546028 . - 0 ID=cds1458;Parent=gene1507;Dbxref=ASAP:ABE-0004910,UniProtKB/Swiss-Prot:P77519,EcoGene:EG13783,GeneID:945737;Note=putative lipoprotein%3Bputative membrane%3B Not classified~putative outer membrane porin protein;gbkey=CDS;gene=yddL;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1546288 1547169 . - . ID=gene1508;Dbxref=EcoGene:EG12713,GeneID:945942;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;gene_synonym=ECK1467,JW1469;locus_tag=b1473 NC_000913.3 RefSeq CDS 1546288 1547169 . - 0 ID=cds1459;Parent=gene1508;Dbxref=ASAP:ABE-0004912,UniProtKB/Swiss-Prot:P46136,Genbank:NP_415990.5,EcoGene:EG12713,GeneID:945942;Name=NP_415990.5;gbkey=CDS;gene=yddG;product=aromatic amino acid exporter;protein_id=NP_415990.5;transl_table=11 NC_000913.3 RefSeq gene 1547401 1550448 . + . ID=gene1509;Dbxref=EcoGene:EG11227,GeneID:946035;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;gene_synonym=ECK1468,JW1470;locus_tag=b1474 NC_000913.3 RefSeq CDS 1547401 1550448 . + 0 ID=cds1460;Parent=gene1509;Dbxref=ASAP:ABE-0004917,UniProtKB/Swiss-Prot:P24183,Genbank:NP_415991.1,EcoGene:EG11227,GeneID:946035;Name=NP_415991.1;Note=formate dehydrogenase-N%2C nitrate-inducible%2C alpha subunit;gbkey=CDS;gene=fdnG;product=formate dehydrogenase-N%2C alpha subunit%2C nitrate-inducible;protein_id=NP_415991.1;transl_except=(pos:1547986..1547988%2Caa:Sec);transl_table=11 NC_000913.3 RefSeq gene 1550461 1551345 . + . ID=gene1510;Dbxref=EcoGene:EG11228,GeneID:948794;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;gene_synonym=ECK1469,JW1471;locus_tag=b1475 NC_000913.3 RefSeq CDS 1550461 1551345 . + 0 ID=cds1461;Parent=gene1510;Dbxref=ASAP:ABE-0004919,UniProtKB/Swiss-Prot:P0AAJ3,Genbank:NP_415992.1,EcoGene:EG11228,GeneID:948794;Name=NP_415992.1;Note=formate dehydrogenase-N%2C nitrate-inducible%2C iron-sulfur beta subunit;gbkey=CDS;gene=fdnH;product=formate dehydrogenase-N%2C Fe-S (beta) subunit%2C nitrate-inducible;protein_id=NP_415992.1;transl_table=11 NC_000913.3 RefSeq gene 1551338 1551991 . + . ID=gene1511;Dbxref=EcoGene:EG11229,GeneID:946038;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;gene_synonym=ECK1470,JW1472;locus_tag=b1476 NC_000913.3 RefSeq CDS 1551338 1551991 . + 0 ID=cds1462;Parent=gene1511;Dbxref=ASAP:ABE-0004921,UniProtKB/Swiss-Prot:P0AEK7,Genbank:NP_415993.1,EcoGene:EG11229,GeneID:946038;Name=NP_415993.1;Note=formate dehydrogenase-N%2C nitrate-inducible%2C cytochrome B556(Fdn) gamma subunit;gbkey=CDS;gene=fdnI;product=formate dehydrogenase-N%2C cytochrome B556 (gamma) subunit%2C nitrate-inducible;protein_id=NP_415993.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1552071 1552167 . + . ID=id198;Note=RIP120 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq repeat_region 1552249 1552345 . + . ID=id199;Note=RIP121 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1552398 1552682 . - . ID=gene1512;Dbxref=EcoGene:EG13784,GeneID:946040;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;gene_synonym=ECK1471,JW5908;locus_tag=b1477 NC_000913.3 RefSeq CDS 1552398 1552682 . - 0 ID=cds1463;Parent=gene1512;Dbxref=ASAP:ABE-0004925,UniProtKB/Swiss-Prot:P67699,Genbank:NP_415994.4,EcoGene:EG13784,GeneID:946040;Name=NP_415994.4;gbkey=CDS;gene=yddM;product=putative DNA-binding transcriptional regulator;protein_id=NP_415994.4;transl_table=11 NC_000913.3 RefSeq gene 1552828 1553838 . - . ID=gene1513;Dbxref=EcoGene:EG12622,GeneID:946036;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;gene_synonym=ECK1472,JW1474,yddN;locus_tag=b1478 NC_000913.3 RefSeq CDS 1552828 1553838 . - 0 ID=cds1464;Parent=gene1513;Dbxref=ASAP:ABE-0004928,UniProtKB/Swiss-Prot:P39451,Genbank:NP_415995.4,EcoGene:EG12622,GeneID:946036;Name=NP_415995.4;Note=alcohol dehydrogenase;gbkey=CDS;gene=adhP;product=ethanol-active dehydrogenase/acetaldehyde-active reductase;protein_id=NP_415995.4;transl_table=11 NC_000913.3 RefSeq gene 1553972 1555669 . - . ID=gene1514;Dbxref=EcoGene:EG10948,GeneID:946031;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;gene_synonym=ECK1473,JW5238,sfcA;locus_tag=b1479 NC_000913.3 RefSeq CDS 1553972 1555669 . - 0 ID=cds1465;Parent=gene1514;Dbxref=ASAP:ABE-0004931,UniProtKB/Swiss-Prot:P26616,Genbank:NP_415996.2,EcoGene:EG10948,GeneID:946031;Name=NP_415996.2;Note=NAD-linked malate dehydrogenase (malic enzyme);gbkey=CDS;gene=maeA;product=malate dehydrogenase%2C decarboxylating%2C NAD-requiring%3B malic enzyme;protein_id=NP_415996.2;transl_table=11 NC_000913.3 RefSeq gene 1555826 1555963 . - . ID=gene1515;Dbxref=EcoGene:EG11508,GeneID:946030;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;gene_synonym=ECK1474,JW5962,rpsV;locus_tag=b1480 NC_000913.3 RefSeq CDS 1555826 1555963 . - 0 ID=cds1466;Parent=gene1515;Dbxref=ASAP:ABE-0004935,UniProtKB/Swiss-Prot:P68191,Genbank:NP_415997.1,EcoGene:EG11508,GeneID:946030;Name=NP_415997.1;Note=stationary phase-induced ribosome-associated protein;gbkey=CDS;gene=sra;product=stationary-phase-induced ribosome-associated protein;protein_id=NP_415997.1;transl_table=11 NC_000913.3 RefSeq gene 1556065 1556280 . - . ID=gene1516;Dbxref=EcoGene:EG14301,GeneID:946041;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;gene_synonym=ECK1475,JW5239,yddX;locus_tag=b1481 NC_000913.3 RefSeq CDS 1556065 1556280 . - 0 ID=cds1467;Parent=gene1516;Dbxref=ASAP:ABE-0004938,UniProtKB/Swiss-Prot:P76127,Genbank:NP_415998.4,EcoGene:EG14301,GeneID:946041;Name=NP_415998.4;gbkey=CDS;gene=bdm;product=biofilm-dependent modulation protein;protein_id=NP_415998.4;transl_table=11 NC_000913.3 RefSeq gene 1556625 1557056 . + . ID=gene1517;Dbxref=EcoGene:EG10680,GeneID:946043;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;gene_synonym=ECK1476,JW1477;locus_tag=b1482 NC_000913.3 RefSeq CDS 1556625 1557056 . + 0 ID=cds1468;Parent=gene1517;Dbxref=ASAP:ABE-0004944,UniProtKB/Swiss-Prot:P0C0L2,Genbank:NP_415999.1,EcoGene:EG10680,GeneID:946043;Name=NP_415999.1;Note=osmotically inducible protein;gbkey=CDS;gene=osmC;product=lipoyl-dependent Cys-based peroxidase%2C hydroperoxide resistance%3B salt-shock inducible membrane protein%3B peroxiredoxin;protein_id=NP_415999.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1557063 1557081 . + . ID=id200;Note=REP122 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1557112 1558038 . - . ID=gene1518;Dbxref=EcoGene:EG13786,GeneID:946020;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;gene_synonym=ECK1477,JW1478,yddO;locus_tag=b1483 NC_000913.3 RefSeq CDS 1557112 1558038 . - 0 ID=cds1469;Parent=gene1518;Dbxref=ASAP:ABE-0004947,UniProtKB/Swiss-Prot:P77622,Genbank:NP_416000.1,EcoGene:EG13786,GeneID:946020;Name=NP_416000.1;Note=ATP-binding component of ABC superfamily;gbkey=CDS;gene=ddpF;product=D%2CD-dipeptide ABC transporter ATPase;protein_id=NP_416000.1;transl_table=11 NC_000913.3 RefSeq gene 1558031 1559017 . - . ID=gene1519;Dbxref=EcoGene:EG13787,GeneID:946002;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;gene_synonym=ECK1478,JW1479,yddP;locus_tag=b1484 NC_000913.3 RefSeq CDS 1558031 1559017 . - 0 ID=cds1470;Parent=gene1519;Dbxref=ASAP:ABE-0004949,UniProtKB/Swiss-Prot:P77268,Genbank:NP_416001.1,EcoGene:EG13787,GeneID:946002;Name=NP_416001.1;Note=ATP-binding component of ABC superfamily;gbkey=CDS;gene=ddpD;product=D%2CD-dipeptide ABC transporter ATPase;protein_id=NP_416001.1;transl_table=11 NC_000913.3 RefSeq gene 1559014 1559910 . - . ID=gene1520;Dbxref=EcoGene:EG13788,GeneID:946028;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;gene_synonym=ECK1479,JW1480,yddQ;locus_tag=b1485 NC_000913.3 RefSeq CDS 1559014 1559910 . - 0 ID=cds1471;Parent=gene1520;Dbxref=ASAP:ABE-0004953,UniProtKB/Swiss-Prot:P77463,Genbank:NP_416002.1,EcoGene:EG13788,GeneID:946028;Name=NP_416002.1;Note=membrane component of ABC superfamily;gbkey=CDS;gene=ddpC;product=D%2CD-dipeptide ABC transporter permease;protein_id=NP_416002.1;transl_table=11 NC_000913.3 RefSeq gene 1559907 1560929 . - . ID=gene1521;Dbxref=EcoGene:EG13789,GeneID:946044;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;gene_synonym=ECK1480,JW1481,yddR;locus_tag=b1486 NC_000913.3 RefSeq CDS 1559907 1560929 . - 0 ID=cds1472;Parent=gene1521;Dbxref=ASAP:ABE-0004955,UniProtKB/Swiss-Prot:P77308,Genbank:NP_416003.1,EcoGene:EG13789,GeneID:946044;Name=NP_416003.1;Note=membrane component of ABC superfamily;gbkey=CDS;gene=ddpB;product=D%2CD-dipeptide ABC transporter permease;protein_id=NP_416003.1;transl_table=11 NC_000913.3 RefSeq gene 1560931 1562481 . - . ID=gene1522;Dbxref=EcoGene:EG13790,GeneID:946052;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=protein_coding;gene_synonym=ECK1481,JW5240,yddS;locus_tag=b1487 NC_000913.3 RefSeq CDS 1560931 1562481 . - 0 ID=cds1473;Parent=gene1522;Dbxref=ASAP:ABE-0004958,UniProtKB/Swiss-Prot:P76128,Genbank:NP_416004.1,EcoGene:EG13790,GeneID:946052;Name=NP_416004.1;Note=periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=ddpA;product=D%2CD-dipeptide ABC transporter periplasmic binding protein;protein_id=NP_416004.1;transl_table=11 NC_000913.3 RefSeq gene 1562495 1563076 . - . ID=gene1523;Dbxref=EcoGene:EG13791,GeneID:945532;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;gene_synonym=ECK1482,JW1483,vanX,yddT;locus_tag=b1488 NC_000913.3 RefSeq CDS 1562495 1563076 . - 0 ID=cds1474;Parent=gene1523;Dbxref=ASAP:ABE-0004960,UniProtKB/Swiss-Prot:P77790,Genbank:NP_416005.1,EcoGene:EG13791,GeneID:945532;Name=NP_416005.1;gbkey=CDS;gene=ddpX;product=D-ala-D-ala dipeptidase%2C Zn-dependent;protein_id=NP_416005.1;transl_table=11 NC_000913.3 RefSeq gene 1563334 1565733 . - . ID=gene1524;Dbxref=EcoGene:EG13792,GeneID:945815;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=dos,ECK1483,JW1484,yddU;locus_tag=b1489 NC_000913.3 RefSeq CDS 1563334 1565733 . - 0 ID=cds1475;Parent=gene1524;Dbxref=ASAP:ABE-0004963,UniProtKB/Swiss-Prot:P76129,Genbank:NP_416006.4,EcoGene:EG13792,GeneID:945815;Name=NP_416006.4;gbkey=CDS;gene=dosP;product=oxygen sensor%2C c-di-GMP phosphodiesterase%2C heme-regulated%3B cold- and stationary phase-induced bioflim regulator;protein_id=NP_416006.4;transl_table=11 NC_000913.3 RefSeq gene 1565758 1567140 . - . ID=gene1525;Dbxref=EcoGene:EG13793,GeneID:945835;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;gene_synonym=ECK1484,JW5241,yddV;locus_tag=b1490 NC_000913.3 RefSeq CDS 1565758 1567140 . - 0 ID=cds1476;Parent=gene1525;Dbxref=ASAP:ABE-0004965,UniProtKB/Swiss-Prot:P0AA89,Genbank:NP_416007.3,EcoGene:EG13793,GeneID:945835;Name=NP_416007.3;gbkey=CDS;gene=dosC;product=diguanylate cyclase%2C cold- and stationary phase-induced oxygen-dependent biofilm regulator;protein_id=NP_416007.3;transl_table=11 NC_000913.3 RefSeq gene 1567504 1568823 . - . ID=gene1526;Dbxref=EcoGene:EG13794,GeneID:945975;Name=yddW;gbkey=Gene;gene=yddW;gene_biotype=protein_coding;gene_synonym=ECK1485,JW1486;locus_tag=b1491 NC_000913.3 RefSeq CDS 1567504 1568823 . - 0 ID=cds1477;Parent=gene1526;Dbxref=ASAP:ABE-0004970,UniProtKB/Swiss-Prot:P64426,Genbank:NP_416008.1,EcoGene:EG13794,GeneID:945975;Name=NP_416008.1;gbkey=CDS;gene=yddW;product=liprotein%2C glycosyl hydrolase homolog;protein_id=NP_416008.1;transl_table=11 NC_000913.3 RefSeq gene 1568954 1570489 . - . ID=gene1527;Dbxref=EcoGene:EG12456,GeneID:946057;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;gene_synonym=acsA,ECK1486,JW1487,xasA;locus_tag=b1492 NC_000913.3 RefSeq CDS 1568954 1570489 . - 0 ID=cds1478;Parent=gene1527;Dbxref=ASAP:ABE-0004973,UniProtKB/Swiss-Prot:P63235,Genbank:NP_416009.1,EcoGene:EG12456,GeneID:946057;Name=NP_416009.1;Note=acid sensitivity protein%2C putative transporter;gbkey=CDS;gene=gadC;product=glutamate:gamma-aminobutyric acid antiporter;protein_id=NP_416009.1;transl_table=11 NC_000913.3 RefSeq gene 1570645 1572045 . - . ID=gene1528;Dbxref=EcoGene:EG11490,GeneID:946058;Name=gadB;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;gene_synonym=ECK1487,JW1488;locus_tag=b1493 NC_000913.3 RefSeq CDS 1570645 1572045 . - 0 ID=cds1479;Parent=gene1528;Dbxref=ASAP:ABE-0004976,UniProtKB/Swiss-Prot:P69910,Genbank:NP_416010.1,EcoGene:EG11490,GeneID:946058;Name=NP_416010.1;Note=glutamate decarboxylase isozyme;gbkey=CDS;gene=gadB;product=glutamate decarboxylase B%2C PLP-dependent;protein_id=NP_416010.1;transl_table=11 NC_000913.3 RefSeq gene 1572407 1575202 . - . ID=gene1529;Dbxref=EcoGene:EG11744,GeneID:946059;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;gene_synonym=ECK1488,JW1489,pqqE,pqqM,yddC;locus_tag=b1494 NC_000913.3 RefSeq CDS 1572407 1575202 . - 0 ID=cds1480;Parent=gene1529;Dbxref=ASAP:ABE-0004979,UniProtKB/Swiss-Prot:P31828,Genbank:NP_416011.1,EcoGene:EG11744,GeneID:946059;Name=NP_416011.1;Note=putative zinc protease;gbkey=CDS;gene=pqqL;product=putative periplasmic M16 family zinc metalloendopeptidase;protein_id=NP_416011.1;transl_table=11 NC_000913.3 RefSeq gene 1575247 1577619 . - . ID=gene1530;Dbxref=EcoGene:EG11743,GeneID:945961;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;gene_synonym=ECK1489,JW1490;locus_tag=b1495 NC_000913.3 RefSeq CDS 1575247 1577619 . - 0 ID=cds1481;Parent=gene1530;Dbxref=ASAP:ABE-0004982,UniProtKB/Swiss-Prot:P31827,Genbank:NP_416012.1,EcoGene:EG11743,GeneID:945961;Name=NP_416012.1;gbkey=CDS;gene=yddB;product=putative TonB-dependent outer membrane receptor;protein_id=NP_416012.1;transl_table=11 NC_000913.3 RefSeq gene 1577657 1579342 . - . ID=gene1531;Dbxref=EcoGene:EG11742,GeneID:945945;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;gene_synonym=ECK1490,JW5242;locus_tag=b1496 NC_000913.3 RefSeq CDS 1577657 1579342 . - 0 ID=cds1482;Parent=gene1531;Dbxref=ASAP:ABE-0004984,UniProtKB/Swiss-Prot:P31826,Genbank:NP_416013.1,EcoGene:EG11742,GeneID:945945;Name=NP_416013.1;gbkey=CDS;gene=yddA;product=putative multidrug ABC transporter permease/ATPase;protein_id=NP_416013.1;transl_table=11 NC_000913.3 RefSeq gene 1579633 1580790 . - . ID=gene1532;Dbxref=EcoGene:EG13795,GeneID:945981;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;gene_synonym=ECK1491,JW1492;locus_tag=b1497 NC_000913.3 RefSeq CDS 1579633 1580790 . - 0 ID=cds1483;Parent=gene1532;Dbxref=ASAP:ABE-0004986,UniProtKB/Swiss-Prot:P76134,Genbank:NP_416014.4,EcoGene:EG13795,GeneID:945981;Name=NP_416014.4;Note=putative enzyme;gbkey=CDS;gene=ydeM;product=putative YdeN-specific sulfatase-maturating enzyme;protein_id=NP_416014.4;transl_table=11 NC_000913.3 RefSeq gene 1580842 1582524 . - . ID=gene1533;Dbxref=EcoGene:EG13796,GeneID:945957;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;gene_synonym=ECK1492,JW5243;locus_tag=b1498 NC_000913.3 RefSeq CDS 1580842 1582524 . - 0 ID=cds1484;Parent=gene1533;Dbxref=ASAP:ABE-0004988,UniProtKB/Swiss-Prot:P77318,Genbank:NP_416015.2,EcoGene:EG13796,GeneID:945957;Name=NP_416015.2;Note=putative sulfatase;gbkey=CDS;gene=ydeN;product=putative Ser-type periplasmic non-aryl sulfatase;protein_id=NP_416015.2;transl_table=11 NC_000913.3 RefSeq gene 1582926 1583687 . - . ID=gene1534;Dbxref=EcoGene:EG13797,GeneID:945922;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;gene_synonym=ECK1493,JW1494;locus_tag=b1499 NC_000913.3 RefSeq CDS 1582926 1583687 . - 0 ID=cds1485;Parent=gene1534;Dbxref=ASAP:ABE-0004992,UniProtKB/Swiss-Prot:P76135,Genbank:NP_416016.1,EcoGene:EG13797,GeneID:945922;Name=NP_416016.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=ydeO;product=UV-inducible global regulator%2C EvgA-%2C GadE-dependent;protein_id=NP_416016.1;transl_table=11 NC_000913.3 RefSeq gene 1583762 1583959 . - . ID=gene1535;Dbxref=EcoGene:EG14466,GeneID:946061;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;gene_synonym=ECK4475,yneN;locus_tag=b1500 NC_000913.3 RefSeq CDS 1583762 1583959 . - 0 ID=cds1486;Parent=gene1535;Dbxref=UniProtKB/Swiss-Prot:P76136,Genbank:NP_416017.1,EcoGene:EG14466,GeneID:946061;Name=NP_416017.1;gbkey=CDS;gene=safA;product=two-component system connector membrane protein%2C EvgSA to PhoQP;protein_id=NP_416017.1;transl_table=11 NC_000913.3 RefSeq gene 1584207 1586486 . - . ID=gene1536;Dbxref=EcoGene:EG13798,GeneID:946055;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;gene_synonym=ECK1494,JW1495;locus_tag=b1501 NC_000913.3 RefSeq CDS 1584207 1586486 . - 0 ID=cds1487;Parent=gene1536;Dbxref=ASAP:ABE-0005001,UniProtKB/Swiss-Prot:P77561,Genbank:NP_416018.1,EcoGene:EG13798,GeneID:946055;Name=NP_416018.1;Note=putative oxidoreductase%2C major subunit;gbkey=CDS;gene=ydeP;product=putative oxidoreductase;protein_id=NP_416018.1;transl_table=11 NC_000913.3 RefSeq gene 1586820 1587734 . - . ID=gene1537;Dbxref=EcoGene:EG13799,GeneID:946050;Name=ydeQ;gbkey=Gene;gene=ydeQ;gene_biotype=protein_coding;gene_synonym=ECK1495,fmlD,JW1496;locus_tag=b1502 NC_000913.3 RefSeq CDS 1586820 1587734 . - 0 ID=cds1488;Parent=gene1537;Dbxref=ASAP:ABE-0005006,UniProtKB/Swiss-Prot:P77588,Genbank:NP_416019.1,EcoGene:EG13799,GeneID:946050;Name=NP_416019.1;Note=putative adhesin%3B similar to FimH protein;gbkey=CDS;gene=ydeQ;product=putative fimbrial-like adhesin protein;protein_id=NP_416019.1;transl_table=11 NC_000913.3 RefSeq gene 1587793 1588296 . - . ID=gene1538;Dbxref=EcoGene:EG13800,GeneID:946049;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;gene_synonym=ECK1496,JW1497;locus_tag=b1503 NC_000913.3 RefSeq CDS 1587793 1588296 . - 0 ID=cds1489;Parent=gene1538;Dbxref=ASAP:ABE-0005008,UniProtKB/Swiss-Prot:P77294,Genbank:NP_416020.1,EcoGene:EG13800,GeneID:946049;Name=NP_416020.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=ydeR;product=putative fimbrial-like adhesin protein;protein_id=NP_416020.1;transl_table=11 NC_000913.3 RefSeq gene 1588309 1588839 . - . ID=gene1539;Dbxref=EcoGene:EG13801,GeneID:946047;Name=ydeS;gbkey=Gene;gene=ydeS;gene_biotype=protein_coding;gene_synonym=ECK1497,JW1498;locus_tag=b1504 NC_000913.3 RefSeq CDS 1588309 1588839 . - 0 ID=cds1490;Parent=gene1539;Dbxref=ASAP:ABE-0005013,UniProtKB/Swiss-Prot:P77789,Genbank:NP_416021.1,EcoGene:EG13801,GeneID:946047;Name=NP_416021.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=ydeS;product=putative fimbrial-like adhesin protein;protein_id=NP_416021.1;transl_table=11 NC_000913.3 RefSeq gene 1588853 1590079 . - . ID=gene1540;Dbxref=EcoGene:EG13802,GeneID:946042;Name=ydeT;gbkey=Gene;gene=ydeT;gene_biotype=pseudogene;gene_synonym=ECK1498,fmlC,JW1499;locus_tag=b1505;pseudo=true NC_000913.3 RefSeq CDS 1588853 1590079 . - 0 ID=cds1491;Parent=gene1540;Dbxref=ASAP:ABE-0005017,UniProtKB/Swiss-Prot:P76137,EcoGene:EG13802,GeneID:946042;Note=pseudogene~putative outer membrane protein;gbkey=CDS;gene=ydeT;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1590334 1590536 . - . ID=gene1541;Dbxref=EcoGene:EG14360,GeneID:946063;Name=yneL;gbkey=Gene;gene=yneL;gene_biotype=pseudogene;gene_synonym=ECK1499,JW5244;locus_tag=b1506;pseudo=true NC_000913.3 RefSeq CDS 1590426 1590536 . - 0 ID=cds1492;Parent=gene1541;Dbxref=ASAP:ABE-0005019,UniProtKB/Swiss-Prot:P76138,EcoGene:EG14360,GeneID:946063;Note=pseudogene%2C AraC family;gbkey=CDS;gene=yneL;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1590334 1590426 . - 0 ID=cds1492;Parent=gene1541;Dbxref=ASAP:ABE-0005019,UniProtKB/Swiss-Prot:P76138,EcoGene:EG14360,GeneID:946063;Note=pseudogene%2C AraC family;gbkey=CDS;gene=yneL;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 1590750 1590777 . - . ID=id201;Note=Dif%3B site of action for XerCD chromosome resolvase%3B required for proper segregation of circular daughter chromosomes~Dif%3B recA-independent recombination site in terminus;gbkey=misc_feature NC_000913.3 RefSeq gene 1590854 1592176 . - . ID=gene1542;Dbxref=EcoGene:EG10443,GeneID:946064;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;gene_synonym=ECK1500,JW1500;locus_tag=b1507 NC_000913.3 RefSeq CDS 1590854 1592176 . - 0 ID=cds1493;Parent=gene1542;Dbxref=ASAP:ABE-0005022,UniProtKB/Swiss-Prot:P23874,Genbank:NP_416024.1,EcoGene:EG10443,GeneID:946064;Name=NP_416024.1;Note=persistence to inhibition of murein or DNA biosynthesis%2C DNA-binding regulator;gbkey=CDS;gene=hipA;product=inactivating GltX kinase facilitating persister formation%3B toxin of HipAB TA pair%3B autokinase;protein_id=NP_416024.1;transl_table=11 NC_000913.3 RefSeq gene 1592176 1592442 . - . ID=gene1543;Dbxref=EcoGene:EG10442,GeneID:946065;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;gene_synonym=ECK1501,JW1501;locus_tag=b1508 NC_000913.3 RefSeq CDS 1592176 1592442 . - 0 ID=cds1494;Parent=gene1543;Dbxref=ASAP:ABE-0005024,UniProtKB/Swiss-Prot:P23873,Genbank:NP_416025.1,EcoGene:EG10442,GeneID:946065;Name=NP_416025.1;Note=persistence to inhibition of murein or DNA biosynthesis%3B regulatory protein;gbkey=CDS;gene=hipB;product=antitoxin of HipAB toxin-antitoxin system;protein_id=NP_416025.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1592631 1592655 . + . ID=id202;Note=REP123 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1592665 1597987 . - . ID=gene1544;Dbxref=EcoGene:EG11780,GeneID:7751623;Name=yneO;gbkey=Gene;gene=yneO;gene_biotype=pseudogene;gene_synonym=ECK1503,JW1503,orfT,ydeK,ydeU;locus_tag=b4696;pseudo=true NC_000913.3 RefSeq CDS 1594127 1597987 . - 0 ID=cds1495;Parent=gene1544;Dbxref=ASAP:ABE-0005037,UniProtKB/Swiss-Prot:P32051,EcoGene:EG11780,GeneID:7751623;Note=pseudogene%2C AidA homolog;gbkey=CDS;gene=yneO;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1592665 1594125 . - 0 ID=cds1495;Parent=gene1544;Dbxref=ASAP:ABE-0005037,UniProtKB/Swiss-Prot:P32051,EcoGene:EG11780,GeneID:7751623;Note=pseudogene%2C AidA homolog;gbkey=CDS;gene=yneO;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1598617 1600209 . - . ID=gene1545;Dbxref=EcoGene:EG13804,GeneID:946069;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;gene_synonym=ECK1504,JW1504,ydeV;locus_tag=b1511 NC_000913.3 RefSeq CDS 1598617 1600209 . - 0 ID=cds1496;Parent=gene1545;Dbxref=ASAP:ABE-0005041,UniProtKB/Swiss-Prot:P77432,Genbank:NP_416028.3,EcoGene:EG13804,GeneID:946069;Name=NP_416028.3;gbkey=CDS;gene=lsrK;product=autoinducer-2 (AI-2) kinase;protein_id=NP_416028.3;transl_table=11 NC_000913.3 RefSeq gene 1600288 1601241 . - . ID=gene1546;Dbxref=EcoGene:EG13805,GeneID:946070;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;gene_synonym=ECK1505,JW1505,ydeW;locus_tag=b1512 NC_000913.3 RefSeq CDS 1600288 1601241 . - 0 ID=cds1497;Parent=gene1546;Dbxref=ASAP:ABE-0005045,UniProtKB/Swiss-Prot:P76141,Genbank:NP_416029.1,EcoGene:EG13805,GeneID:946070;Name=NP_416029.1;gbkey=CDS;gene=lsrR;product=lsr operon transcriptional repressor;protein_id=NP_416029.1;transl_table=11 NC_000913.3 RefSeq gene 1601490 1603025 . + . ID=gene1547;Dbxref=EcoGene:EG13806,GeneID:945680;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;gene_synonym=ECK1506,ego,JW1506,ydeX;locus_tag=b1513 NC_000913.3 RefSeq CDS 1601490 1603025 . + 0 ID=cds1498;Parent=gene1547;Dbxref=ASAP:ABE-0005056,UniProtKB/Swiss-Prot:P77257,Genbank:NP_416030.1,EcoGene:EG13806,GeneID:945680;Name=NP_416030.1;Note=autoinducer-2 (AI-2)-transporting ATPase;gbkey=CDS;gene=lsrA;product=autoinducer 2 import ATP-binding protein;protein_id=NP_416030.1;transl_table=11 NC_000913.3 RefSeq gene 1603019 1604047 . + . ID=gene1548;Dbxref=EcoGene:EG13807,GeneID:946105;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;gene_synonym=ECK1507,JW1507,ydeY;locus_tag=b1514 NC_000913.3 RefSeq CDS 1603019 1604047 . + 0 ID=cds1499;Parent=gene1548;Dbxref=ASAP:ABE-0005059,UniProtKB/Swiss-Prot:P77672,Genbank:NP_416031.1,EcoGene:EG13807,GeneID:946105;Name=NP_416031.1;Note=autoinducer-2 (AI-2)-transporting membrane channel protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=lsrC;product=autoinducer 2 import system permease protein;protein_id=NP_416031.1;transl_table=11 NC_000913.3 RefSeq gene 1604047 1605039 . + . ID=gene1549;Dbxref=EcoGene:EG13808,GeneID:946264;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;gene_synonym=ECK1508,JW1508,ydeZ;locus_tag=b1515 NC_000913.3 RefSeq CDS 1604047 1605039 . + 0 ID=cds1500;Parent=gene1549;Dbxref=ASAP:ABE-0005061,UniProtKB/Swiss-Prot:P0AFS1,Genbank:NP_416032.1,EcoGene:EG13808,GeneID:946264;Name=NP_416032.1;Note=autoinducer-2 (AI-2)-transporting membrane channel protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=lsrD;product=autoinducer 2 import system permease protein;protein_id=NP_416032.1;transl_table=11 NC_000913.3 RefSeq gene 1605051 1606073 . + . ID=gene1550;Dbxref=EcoGene:EG13809,GeneID:945418;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;gene_synonym=ECK1509,JW1509,yneA;locus_tag=b1516 NC_000913.3 RefSeq CDS 1605051 1606073 . + 0 ID=cds1501;Parent=gene1550;Dbxref=ASAP:ABE-0005063,UniProtKB/Swiss-Prot:P76142,Genbank:NP_416033.1,EcoGene:EG13809,GeneID:945418;Name=NP_416033.1;Note=periplasmic autoinducer-2 (AI-2) binding protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=lsrB;product=autoinducer 2-binding protein;protein_id=NP_416033.1;transl_table=11 NC_000913.3 RefSeq gene 1606100 1606975 . + . ID=gene1551;Dbxref=EcoGene:EG13810,GeneID:946071;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;gene_synonym=ECK1510,JW1510,yneB;locus_tag=b1517 NC_000913.3 RefSeq CDS 1606100 1606975 . + 0 ID=cds1502;Parent=gene1551;Dbxref=ASAP:ABE-0005065,UniProtKB/Swiss-Prot:P76143,Genbank:NP_416034.1,EcoGene:EG13810,GeneID:946071;Name=NP_416034.1;gbkey=CDS;gene=lsrF;product=putative autoinducer-2 (AI-2) aldolase;protein_id=NP_416034.1;transl_table=11 NC_000913.3 RefSeq gene 1606999 1607289 . + . ID=gene1552;Dbxref=EcoGene:EG13811,GeneID:946073;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;gene_synonym=ECK1511,JW1511,yneC;locus_tag=b1518 NC_000913.3 RefSeq CDS 1606999 1607289 . + 0 ID=cds1503;Parent=gene1552;Dbxref=ASAP:ABE-0005067,UniProtKB/Swiss-Prot:P64461,Genbank:NP_416035.1,EcoGene:EG13811,GeneID:946073;Name=NP_416035.1;gbkey=CDS;gene=lsrG;product=autoinducer-2 (AI-2) degrading protein LsrG;protein_id=NP_416035.1;transl_table=11 NC_000913.3 RefSeq gene 1607346 1608104 . + . ID=gene1553;Dbxref=EcoGene:EG13812,GeneID:946074;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;gene_synonym=ECK1512,JW1512,lsrE,yneD;locus_tag=b1519 NC_000913.3 RefSeq CDS 1607346 1608104 . + 0 ID=cds1504;Parent=gene1553;Dbxref=ASAP:ABE-0005070,UniProtKB/Swiss-Prot:P76145,Genbank:NP_416036.1,EcoGene:EG13812,GeneID:946074;Name=NP_416036.1;Note=trans-aconitate 2-methyltransferase;gbkey=CDS;gene=tam;product=trans-aconitate methyltransferase;protein_id=NP_416036.1;transl_table=11 NC_000913.3 RefSeq gene 1608108 1609022 . - . ID=gene1554;Dbxref=EcoGene:EG13813,GeneID:946188;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;gene_synonym=ECK1513,JW5245;locus_tag=b1520 NC_000913.3 RefSeq CDS 1608108 1609022 . - 0 ID=cds1505;Parent=gene1554;Dbxref=ASAP:ABE-0005072,UniProtKB/Swiss-Prot:P76146,Genbank:NP_416037.2,EcoGene:EG13813,GeneID:946188;Name=NP_416037.2;gbkey=CDS;gene=yneE;product=bestrophin family putative inner membrane protein;protein_id=NP_416037.2;transl_table=11 NC_000913.3 RefSeq gene 1609229 1610680 . - . ID=gene1555;Dbxref=EcoGene:EG11065,GeneID:945542;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;gene_synonym=ECK1514,JW1514;locus_tag=b1521 NC_000913.3 RefSeq CDS 1609229 1610680 . - 0 ID=cds1506;Parent=gene1555;Dbxref=ASAP:ABE-0005076,UniProtKB/Swiss-Prot:P0A6L7,Genbank:YP_025302.1,EcoGene:EG11065,GeneID:945542;Name=YP_025302.1;Note=altronate oxidoreductase;gbkey=CDS;gene=uxaB;product=altronate oxidoreductase%2C NAD-dependent;protein_id=YP_025302.1;transl_table=11 NC_000913.3 RefSeq gene 1610907 1611854 . - . ID=gene1556;Dbxref=EcoGene:EG13814,GeneID:947422;Name=yneF;gbkey=Gene;gene=yneF;gene_biotype=protein_coding;gene_synonym=ECK1515,JW5825;locus_tag=b1522 NC_000913.3 RefSeq CDS 1610907 1611854 . - 0 ID=cds1507;Parent=gene1556;Dbxref=ASAP:ABE-0005081,UniProtKB/Swiss-Prot:P76147,Genbank:NP_416039.1,EcoGene:EG13814,GeneID:947422;Name=NP_416039.1;gbkey=CDS;gene=yneF;product=putative membrane-bound diguanylate cyclase;protein_id=NP_416039.1;transl_table=11 NC_000913.3 RefSeq gene 1611966 1612325 . - . ID=gene1557;Dbxref=EcoGene:EG13815,GeneID:946171;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;gene_synonym=ECK1516,JW1516;locus_tag=b1523 NC_000913.3 RefSeq CDS 1611966 1612325 . - 0 ID=cds1508;Parent=gene1557;Dbxref=ASAP:ABE-0005084,UniProtKB/Swiss-Prot:P76148,Genbank:NP_416040.1,EcoGene:EG13815,GeneID:946171;Name=NP_416040.1;gbkey=CDS;gene=yneG;product=DUF4186 family protein;protein_id=NP_416040.1;transl_table=11 NC_000913.3 RefSeq gene 1612325 1613251 . - . ID=gene1558;Dbxref=EcoGene:EG13816,GeneID:944973;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;gene_synonym=ECK1517,glsA2,JW1517,yneH;locus_tag=b1524 NC_000913.3 RefSeq CDS 1612325 1613251 . - 0 ID=cds1509;Parent=gene1558;Dbxref=ASAP:ABE-0005086,UniProtKB/Swiss-Prot:P0A6W0,Genbank:NP_416041.1,EcoGene:EG13816,GeneID:944973;Name=NP_416041.1;Note=putative glutaminase;gbkey=CDS;gene=glsB;product=glutaminase 2;protein_id=NP_416041.1;transl_table=11 NC_000913.3 RefSeq gene 1613315 1614703 . - . ID=gene1559;Dbxref=EcoGene:EG13817,GeneID:947440;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;gene_synonym=ECK1518,JW5247,yneI;locus_tag=b1525 NC_000913.3 RefSeq CDS 1613315 1614703 . - 0 ID=cds1510;Parent=gene1559;Dbxref=ASAP:ABE-0005092,UniProtKB/Swiss-Prot:P76149,Genbank:NP_416042.2,EcoGene:EG13817,GeneID:947440;Name=NP_416042.2;Note=putative aldehyde dehydrogenase;gbkey=CDS;gene=sad;product=succinate semialdehyde dehydrogenase%2C NAD(P)+-dependent;protein_id=NP_416042.2;transl_table=11 NC_000913.3 RefSeq gene 1614804 1615685 . + . ID=gene1560;Dbxref=EcoGene:EG13818,GeneID:946079;Name=yneJ;gbkey=Gene;gene=yneJ;gene_biotype=protein_coding;gene_synonym=ECK1519,JW1519;locus_tag=b1526 NC_000913.3 RefSeq CDS 1614804 1615685 . + 0 ID=cds1511;Parent=gene1560;Dbxref=ASAP:ABE-0005096,UniProtKB/Swiss-Prot:P77309,Genbank:NP_416043.1,EcoGene:EG13818,GeneID:946079;Name=NP_416043.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yneJ;product=putative DNA-binding transcriptional regulator;protein_id=NP_416043.1;transl_table=11 NC_000913.3 RefSeq gene 1615763 1616878 . + . ID=gene1561;Dbxref=EcoGene:EG13819,GeneID:946080;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;gene_synonym=ECK1520,JW1520;locus_tag=b1527 NC_000913.3 RefSeq CDS 1615763 1616878 . + 0 ID=cds1512;Parent=gene1561;Dbxref=ASAP:ABE-0005100,UniProtKB/Swiss-Prot:P76150,Genbank:NP_416044.1,EcoGene:EG13819,GeneID:946080;Name=NP_416044.1;gbkey=CDS;gene=yneK;product=uncharacterized protein;protein_id=NP_416044.1;transl_table=11 NC_000913.3 RefSeq gene 1617028 1618218 . + . ID=gene1562;Dbxref=EcoGene:EG11636,GeneID:947218;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;gene_synonym=ECK1521,JW1521,sotB;locus_tag=b1528 NC_000913.3 RefSeq CDS 1617028 1618218 . + 0 ID=cds1513;Parent=gene1562;Dbxref=ASAP:ABE-0005103,UniProtKB/Swiss-Prot:P31122,Genbank:NP_416045.1,EcoGene:EG11636,GeneID:947218;Name=NP_416045.1;Note=L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS family);gbkey=CDS;gene=ydeA;product=arabinose efflux transporter%2C arabinose-inducible;protein_id=NP_416045.1;transl_table=11 NC_000913.3 RefSeq gene 1618243 1618908 . - . ID=gene1563;Dbxref=EcoGene:EG11637,GeneID:947132;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;gene_synonym=ECK1522,JW1522,ydeB,ydeC;locus_tag=b1529 NC_000913.3 RefSeq CDS 1618243 1618908 . - 0 ID=cds1514;Parent=gene1563;Dbxref=ASAP:ABE-0005106,UniProtKB/Swiss-Prot:P0AEY1,Genbank:NP_416046.1,EcoGene:EG11637,GeneID:947132;Name=NP_416046.1;gbkey=CDS;gene=marC;product=UPF0056 family inner membrane protein;protein_id=NP_416046.1;transl_table=11 NC_000913.3 RefSeq gene 1619120 1619554 . + . ID=gene1564;Dbxref=EcoGene:EG11435,GeneID:945825;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;gene_synonym=cfxB,ECK1523,inaR,JW5248,soxQ;locus_tag=b1530 NC_000913.3 RefSeq CDS 1619120 1619554 . + 0 ID=cds1515;Parent=gene1564;Dbxref=ASAP:ABE-0005110,UniProtKB/Swiss-Prot:P27245,Genbank:NP_416047.4,EcoGene:EG11435,GeneID:945825;Name=NP_416047.4;Note=multiple antibiotic resistance protein%3B repressor of mar operon;gbkey=CDS;gene=marR;product=transcriptional repressor of multiple antibiotic resistance;protein_id=NP_416047.4;transl_table=11 NC_000913.3 RefSeq gene 1619574 1619957 . + . ID=gene1565;Dbxref=EcoGene:EG11434,GeneID:947613;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;gene_synonym=cfxB,ECK1524,inaR,JW5249,nfxC,norB,soxQ;locus_tag=b1531 NC_000913.3 RefSeq CDS 1619574 1619957 . + 0 ID=cds1516;Parent=gene1565;Dbxref=ASAP:ABE-0005112,UniProtKB/Swiss-Prot:P0ACH5,Genbank:NP_416048.2,EcoGene:EG11434,GeneID:947613;Name=NP_416048.2;Note=multiple antibiotic resistance%3B transcriptional activator of defense systems;gbkey=CDS;gene=marA;product=multiple antibiotic resistance transcriptional regulator;protein_id=NP_416048.2;transl_table=11 NC_000913.3 RefSeq gene 1619989 1620207 . + . ID=gene1566;Dbxref=EcoGene:EG11599,GeneID:946184;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;gene_synonym=ECK1525,JW1525;locus_tag=b1532 NC_000913.3 RefSeq CDS 1619989 1620207 . + 0 ID=cds1517;Parent=gene1566;Dbxref=ASAP:ABE-0005114,UniProtKB/Swiss-Prot:P31121,Genbank:NP_416049.1,EcoGene:EG11599,GeneID:946184;Name=NP_416049.1;Note=multiple antibiotic resistance protein;gbkey=CDS;gene=marB;product=periplasmic mar operon regulator;protein_id=NP_416049.1;transl_table=11 NC_000913.3 RefSeq gene 1620238 1621137 . - . ID=gene1567;Dbxref=EcoGene:EG11639,GeneID:946081;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;gene_synonym=ECK1526,JW5250,ydeD;locus_tag=b1533 NC_000913.3 RefSeq CDS 1620238 1621137 . - 0 ID=cds1518;Parent=gene1567;Dbxref=ASAP:ABE-0005116,UniProtKB/Swiss-Prot:P31125,Genbank:NP_416050.4,EcoGene:EG11639,GeneID:946081;Name=NP_416050.4;Note=amino acid metabolite efflux pump;gbkey=CDS;gene=eamA;product=cysteine and O-acetyl-L-serine efflux system;protein_id=NP_416050.4;transl_table=11 NC_000913.3 RefSeq gene 1621332 1622519 . + . ID=gene1568;Dbxref=EcoGene:EG11640,GeneID:946083;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;gene_synonym=ECK1527,JW1527,ydeF;locus_tag=b1534 NC_000913.3 RefSeq CDS 1621332 1622519 . + 0 ID=cds1519;Parent=gene1568;Dbxref=ASAP:ABE-0005121,UniProtKB/Swiss-Prot:P31126,Genbank:NP_416051.1,EcoGene:EG11640,GeneID:946083;Name=NP_416051.1;Note=putative transport protein;gbkey=CDS;gene=ydeE;product=putative transporter;protein_id=NP_416051.1;transl_table=11 NC_000913.3 RefSeq gene 1622646 1622741 . + . ID=gene1569;Dbxref=EcoGene:EG14395,GeneID:5061497;Name=yneM;gbkey=Gene;gene=yneM;gene_biotype=protein_coding;gene_synonym=ECK4409;locus_tag=b4599 NC_000913.3 RefSeq CDS 1622646 1622741 . + 0 ID=cds1520;Parent=gene1569;Dbxref=UniProtKB/Swiss-Prot:A5A616,Genbank:YP_001165319.1,EcoGene:EG14395,GeneID:5061497;Name=YP_001165319.1;gbkey=CDS;gene=yneM;product=inner membrane-associated protein;protein_id=YP_001165319.1;transl_table=11 NC_000913.3 RefSeq gene 1622817 1622914 . - . ID=gene1570;Dbxref=EcoGene:EG31184,GeneID:8764967;Name=mgrR;gbkey=Gene;gene=mgrR;gene_biotype=antisense_RNA;gene_synonym=ECK4510;locus_tag=b4698 NC_000913.3 RefSeq ncRNA 1622817 1622914 . - . ID=rna48;Parent=gene1570;Dbxref=ASAP:ABE-0285266,EcoGene:EG31184,GeneID:8764967;gbkey=ncRNA;gene=mgrR;ncrna_class=antisense_RNA;product=sRNA antisense regulator down regulates YgdQ and EptB%2C PhoPQ-regulated%2C Hfq-dependent%3B affects sensitivity to antimicrobial peptides NC_000913.3 RefSeq exon 1622817 1622914 . - . ID=id203;Parent=rna48;Dbxref=ASAP:ABE-0285266,EcoGene:EG31184,GeneID:8764967;gbkey=ncRNA;gene=mgrR;ncrna_class=antisense_RNA;product=sRNA antisense regulator down regulates YgdQ and EptB%2C PhoPQ-regulated%2C Hfq-dependent%3B affects sensitivity to antimicrobial peptides NC_000913.3 RefSeq gene 1622960 1623850 . - . ID=gene1571;Dbxref=EcoGene:EG11643,GeneID:946075;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;gene_synonym=ECK1528,JW1528,ydeG,ydeH;locus_tag=b1535 NC_000913.3 RefSeq CDS 1622960 1623850 . - 0 ID=cds1521;Parent=gene1571;Dbxref=ASAP:ABE-0005123,UniProtKB/Swiss-Prot:P31129,Genbank:NP_416052.1,EcoGene:EG11643,GeneID:946075;Name=NP_416052.1;gbkey=CDS;gene=dgcZ;product=diguanylate cyclase%2C zinc-sensing;protein_id=NP_416052.1;transl_table=11 NC_000913.3 RefSeq gene 1624105 1624497 . - . ID=gene1572;Dbxref=EcoGene:EG11644,GeneID:946068;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;gene_synonym=ECK1529,JW1529;locus_tag=b1536 NC_000913.3 RefSeq CDS 1624105 1624497 . - 0 ID=cds1522;Parent=gene1572;Dbxref=ASAP:ABE-0005127,UniProtKB/Swiss-Prot:P31130,Genbank:NP_416054.1,EcoGene:EG11644,GeneID:946068;Name=NP_416054.1;gbkey=CDS;gene=ydeI;product=hydrogen peroxide resistance OB fold protein%3B putative periplasmic protein;protein_id=NP_416054.1;transl_table=11 NC_000913.3 RefSeq gene 1624773 1625291 . + . ID=gene1573;Dbxref=EcoGene:EG11645,GeneID:946067;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;gene_synonym=ECK1530,JW1530;locus_tag=b1537 NC_000913.3 RefSeq CDS 1624773 1625291 . + 0 ID=cds1523;Parent=gene1573;Dbxref=ASAP:ABE-0005131,UniProtKB/Swiss-Prot:P31131,Genbank:NP_416055.1,EcoGene:EG11645,GeneID:946067;Name=NP_416055.1;gbkey=CDS;gene=ydeJ;product=inactive PncC family protein;protein_id=NP_416055.1;transl_table=11 NC_000913.3 RefSeq gene 1625335 1627380 . - . ID=gene1574;Dbxref=EcoGene:EG10212,GeneID:946084;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;gene_synonym=ECK1531,JW1531;locus_tag=b1538 NC_000913.3 RefSeq CDS 1625335 1627380 . - 0 ID=cds1524;Parent=gene1574;Dbxref=ASAP:ABE-0005133,UniProtKB/Swiss-Prot:P24171,Genbank:NP_416056.1,EcoGene:EG10212,GeneID:946084;Name=NP_416056.1;gbkey=CDS;gene=dcp;product=dipeptidyl carboxypeptidase II;protein_id=NP_416056.1;transl_table=11 NC_000913.3 RefSeq gene 1627517 1628263 . + . ID=gene1575;Dbxref=EcoGene:EG12345,GeneID:946085;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;gene_synonym=ECK1532,JW1532;locus_tag=b1539 NC_000913.3 RefSeq CDS 1627517 1628263 . + 0 ID=cds1525;Parent=gene1575;Dbxref=ASAP:ABE-0005137,UniProtKB/Swiss-Prot:P39831,Genbank:NP_416057.1,EcoGene:EG12345,GeneID:946085;Name=NP_416057.1;Note=putative oxidoreductase;gbkey=CDS;gene=ydfG;product=NADP-dependent 3-hydroxy acid dehydrogenase%3B malonic semialdehyde reductase;protein_id=NP_416057.1;transl_table=11 NC_000913.3 RefSeq gene 1628352 1629038 . + . ID=gene1576;Dbxref=EcoGene:EG13820,GeneID:946087;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ECK1533,JW1533,ydfH;locus_tag=b1540 NC_000913.3 RefSeq CDS 1628352 1629038 . + 0 ID=cds1526;Parent=gene1576;Dbxref=ASAP:ABE-0005144,UniProtKB/Swiss-Prot:P0ACM2,Genbank:NP_416058.1,EcoGene:EG13820,GeneID:946087;Name=NP_416058.1;gbkey=CDS;gene=rspR;product=transcriptional repressor for rspAB;protein_id=NP_416058.1;transl_table=11 NC_000913.3 RefSeq gene 1629215 1629418 . + . ID=gene1577;Dbxref=EcoGene:EG13838,GeneID:948796;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;gene_synonym=ECK1534,JW1534;locus_tag=b1541 NC_000913.3 RefSeq CDS 1629215 1629418 . + 0 ID=cds1527;Parent=gene1577;Dbxref=ASAP:ABE-0005147,UniProtKB/Swiss-Prot:P64463,Genbank:NP_416059.1,EcoGene:EG13838,GeneID:948796;Name=NP_416059.1;gbkey=CDS;gene=ydfZ;product=selenoprotein%2C function unknown;protein_id=NP_416059.1;transl_table=11 NC_000913.3 RefSeq gene 1629453 1630913 . - . ID=gene1578;Dbxref=EcoGene:EG13821,GeneID:945861;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;gene_synonym=ECK1535,JW1535;locus_tag=b1542 NC_000913.3 RefSeq CDS 1629453 1630913 . - 0 ID=cds1528;Parent=gene1578;Dbxref=ASAP:ABE-0005149,UniProtKB/Swiss-Prot:P77260,Genbank:NP_416060.1,EcoGene:EG13821,GeneID:945861;Name=NP_416060.1;Note=putative oxidoreductase;gbkey=CDS;gene=ydfI;product=putative NAD-dependent D-mannonate oxidoreductase;protein_id=NP_416060.1;transl_table=11 NC_000913.3 RefSeq gene 1652755 1652838 . - . ID=gene1579;Dbxref=EcoGene:EG13822,GeneID:944802;Name=ydfJ;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;gene_synonym=ECK1536,JW1536,ynfP;locus_tag=b4600;part=1/2;pseudo=true NC_000913.3 RefSeq gene 1631002 1632285 . - . ID=gene1579;Dbxref=EcoGene:EG13822,GeneID:944802;Name=ydfJ;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;gene_synonym=ECK1536,JW1536,ynfP;locus_tag=b4600;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 1652755 1652838 . - 0 ID=cds1529;Parent=gene1579;Dbxref=ASAP:ABE-0005152,ASAP:ABE-0285055,UniProtKB/Swiss-Prot:P77228,EcoGene:EG13822,GeneID:944802;Note=pseudogene%2C MFS transporter family%3B interrupted by Qin prophage%3BPhage or Prophage Related~putative transport protein;gbkey=CDS;gene=ydfJ;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1631002 1632285 . - 0 ID=cds1529;Parent=gene1579;Dbxref=ASAP:ABE-0005152,ASAP:ABE-0285055,UniProtKB/Swiss-Prot:P77228,EcoGene:EG13822,GeneID:944802;Note=pseudogene%2C MFS transporter family%3B interrupted by Qin prophage%3BPhage or Prophage Related~putative transport protein;gbkey=CDS;gene=ydfJ;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 1632286 1652743 . - . ID=id204;Note=cryptic prophage Qin/Kim;gbkey=misc_feature NC_000913.3 RefSeq gene 1633072 1633305 . + . ID=gene1580;Dbxref=EcoGene:EG13823,GeneID:947451;Name=ydfK;gbkey=Gene;gene=ydfK;gene_biotype=protein_coding;gene_synonym=ECK1537,JW1537;locus_tag=b1544 NC_000913.3 RefSeq CDS 1633072 1633305 . + 0 ID=cds1530;Parent=gene1580;Dbxref=ASAP:ABE-0005161,UniProtKB/Swiss-Prot:P76154,Genbank:NP_416062.2,EcoGene:EG13823,GeneID:947451;Name=NP_416062.2;gbkey=CDS;gene=ydfK;product=cold shock protein%2C function unknown%2C Qin prophage;protein_id=NP_416062.2;transl_table=11 NC_000913.3 RefSeq gene 1633622 1634212 . + . ID=gene1581;Dbxref=EcoGene:EG13824,GeneID:946088;Name=pinQ;gbkey=Gene;gene=pinQ;gene_biotype=protein_coding;gene_synonym=ECK1538,JW1538,ydfL;locus_tag=b1545 NC_000913.3 RefSeq CDS 1633622 1634212 . + 0 ID=cds1531;Parent=gene1581;Dbxref=ASAP:ABE-0005164,UniProtKB/Swiss-Prot:P77170,Genbank:NP_416063.1,EcoGene:EG13824,GeneID:946088;Name=NP_416063.1;gbkey=CDS;gene=pinQ;product=Qin prophage%3B putative site-specific recombinase;protein_id=NP_416063.1;transl_table=11 NC_000913.3 RefSeq gene 1634310 1634885 . - . ID=gene1582;Dbxref=EcoGene:EG13825,GeneID:946060;Name=tfaQ;gbkey=Gene;gene=tfaQ;gene_biotype=protein_coding;gene_synonym=ECK1539,JW1539,ydfM;locus_tag=b1546 NC_000913.3 RefSeq CDS 1634310 1634885 . - 0 ID=cds1532;Parent=gene1582;Dbxref=ASAP:ABE-0005166,UniProtKB/Swiss-Prot:P76155,Genbank:NP_416064.1,EcoGene:EG13825,GeneID:946060;Name=NP_416064.1;Note=tail fiber assembly protein homolog from lambdoid prophage Qin;gbkey=CDS;gene=tfaQ;product=Qin prophage%3B putative tail fibre assembly protein;protein_id=NP_416064.1;transl_table=11 NC_000913.3 RefSeq gene 1634885 1635847 . - . ID=gene1583;Dbxref=EcoGene:EG13826,GeneID:946098;Name=stfQ;gbkey=Gene;gene=stfQ;gene_biotype=protein_coding;gene_synonym=ECK1540,JW1540,ydfN;locus_tag=b1547 NC_000913.3 RefSeq CDS 1634885 1635847 . - 0 ID=cds1533;Parent=gene1583;Dbxref=ASAP:ABE-0005168,UniProtKB/Swiss-Prot:P77515,Genbank:NP_416065.1,EcoGene:EG13826,GeneID:946098;Name=NP_416065.1;gbkey=CDS;gene=stfQ;product=Qin prophage%3B putative side tail fibre assembly protein;protein_id=NP_416065.1;transl_table=11 NC_000913.3 RefSeq gene 1635840 1636367 . - . ID=gene1584;Dbxref=EcoGene:EG11634,GeneID:946021;Name=nohQ;gbkey=Gene;gene=nohQ;gene_biotype=pseudogene;gene_synonym=ECK1541,JW1541,nohA;locus_tag=b1548;pseudo=true NC_000913.3 RefSeq CDS 1635840 1636367 . - 0 ID=cds1534;Parent=gene1584;Dbxref=ASAP:ABE-0005172,UniProtKB/Swiss-Prot:P31061,EcoGene:EG11634,GeneID:946021;Note=pseudogene%2C Qin prophage%3B Phage DNA packaging protein Nu1 family%3BPhage or Prophage Related~DNA packaging protein NU1 homolog from lambdoid prophage Qin;gbkey=CDS;gene=nohQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1636756 1636989 . + . ID=gene1585;Dbxref=EcoGene:EG14422,GeneID:1450267;Name=ynfO;gbkey=Gene;gene=ynfO;gene_biotype=protein_coding;gene_synonym=ECK1542,JW5251;locus_tag=b4533 NC_000913.3 RefSeq CDS 1636756 1636989 . + 0 ID=cds1535;Parent=gene1585;Dbxref=ASAP:ABE-0285054,UniProtKB/Swiss-Prot:Q2EES0,Genbank:YP_588454.1,EcoGene:EG14422,GeneID:1450267;Name=YP_588454.1;gbkey=CDS;gene=ynfO;product=uncharacterized protein%2C Qin prophage;protein_id=YP_588454.1;transl_table=11 NC_000913.3 RefSeq gene 1637047 1637457 . + . ID=gene1586;Dbxref=EcoGene:EG13827,GeneID:945992;Name=ydfO;gbkey=Gene;gene=ydfO;gene_biotype=protein_coding;gene_synonym=ECK1543,JW5252;locus_tag=b1549 NC_000913.3 RefSeq CDS 1637047 1637457 . + 0 ID=cds1536;Parent=gene1586;Dbxref=ASAP:ABE-0005175,UniProtKB/Swiss-Prot:P76156,Genbank:NP_416067.2,EcoGene:EG13827,GeneID:945992;Name=NP_416067.2;gbkey=CDS;gene=ydfO;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416067.2;transl_table=11 NC_000913.3 RefSeq gene 1637609 1637782 . - . ID=gene1587;Dbxref=EcoGene:EG13837,GeneID:946054;Name=gnsB;gbkey=Gene;gene=gnsB;gene_biotype=protein_coding;gene_synonym=ECK1544,JW5253,ydfY;locus_tag=b1550 NC_000913.3 RefSeq CDS 1637609 1637782 . - 0 ID=cds1537;Parent=gene1587;Dbxref=ASAP:ABE-0005177,UniProtKB/Swiss-Prot:P77695,Genbank:NP_416068.2,EcoGene:EG13837,GeneID:946054;Name=NP_416068.2;gbkey=CDS;gene=gnsB;product=Qin prophage%3B multicopy suppressor of secG(Cs) and fabA6(Ts);protein_id=NP_416068.2;transl_table=11 NC_000913.3 RefSeq gene 1637954 1638109 . - . ID=gene1588;Dbxref=EcoGene:EG14388,GeneID:946097;Name=ynfN;gbkey=Gene;gene=ynfN;gene_biotype=protein_coding;gene_synonym=ECK1545,JW5254;locus_tag=b1551 NC_000913.3 RefSeq CDS 1637954 1638109 . - 0 ID=cds1538;Parent=gene1588;Dbxref=ASAP:ABE-0005180,UniProtKB/Swiss-Prot:P76157,Genbank:NP_416069.2,EcoGene:EG14388,GeneID:946097;Name=NP_416069.2;gbkey=CDS;gene=ynfN;product=Qin prophage%3B cold shock-induced protein;protein_id=NP_416069.2;transl_table=11 NC_000913.3 RefSeq gene 1638455 1638667 . - . ID=gene1589;Dbxref=EcoGene:EG13877,GeneID:946099;Name=cspI;gbkey=Gene;gene=cspI;gene_biotype=protein_coding;gene_synonym=cspJ,ECK1546,JW1544;locus_tag=b1552 NC_000913.3 RefSeq CDS 1638455 1638667 . - 0 ID=cds1539;Parent=gene1589;Dbxref=ASAP:ABE-0005183,UniProtKB/Swiss-Prot:P0A986,Genbank:NP_416070.1,EcoGene:EG13877,GeneID:946099;Name=NP_416070.1;Note=cold shock-like protein;gbkey=CDS;gene=cspI;product=Qin prophage%3B cold shock protein;protein_id=NP_416070.1;transl_table=11 NC_000913.3 RefSeq gene 1639030 1639527 . - . ID=gene1590;Dbxref=EcoGene:EG13828,GeneID:946101;Name=rzpQ;gbkey=Gene;gene=rzpQ;gene_biotype=protein_coding;gene_synonym=ECK1547,JW1545,Rz,ydfP;locus_tag=b1553 NC_000913.3 RefSeq CDS 1639030 1639527 . - 0 ID=cds1540;Parent=gene1590;Dbxref=ASAP:ABE-0005187,UniProtKB/Swiss-Prot:P76158,Genbank:NP_416071.1,EcoGene:EG13828,GeneID:946101;Name=NP_416071.1;Note=completely contained in another CDS;gbkey=CDS;gene=rzpQ;product=Rz-like protein%2C Qin prophage;protein_id=NP_416071.1;transl_table=11 NC_000913.3 RefSeq gene 1639080 1639334 . - . ID=gene1591;Dbxref=EcoGene:EG14493,GeneID:7751615;Name=rzoQ;gbkey=Gene;gene=rzoQ;gene_biotype=protein_coding;gene_synonym=ECK4503,Rz1;locus_tag=b4689 NC_000913.3 RefSeq CDS 1639080 1639334 . - 0 ID=cds1541;Parent=gene1591;Dbxref=UniProtKB/Swiss-Prot:C1P601,Genbank:YP_002791241.1,EcoGene:EG14493,GeneID:7751615;Name=YP_002791241.1;Note=completely contained in another CDS;gbkey=CDS;gene=rzoQ;product=putative Rz1-like lipoprotein%2C Qin prophage;protein_id=YP_002791241.1;transl_table=11 NC_000913.3 RefSeq gene 1639524 1640057 . - . ID=gene1592;Dbxref=EcoGene:EG13829,GeneID:946100;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;gene_synonym=arrQ,ECK1548,JW1546,ydfQ;locus_tag=b1554 NC_000913.3 RefSeq CDS 1639524 1640057 . - 0 ID=cds1542;Parent=gene1592;Dbxref=ASAP:ABE-0005189,UniProtKB/Swiss-Prot:P76159,Genbank:NP_416072.1,EcoGene:EG13829,GeneID:946100;Name=NP_416072.1;gbkey=CDS;gene=rrrQ;product=Qin prophage%3B putative lysozyme;protein_id=NP_416072.1;transl_table=11 NC_000913.3 RefSeq gene 1640054 1640365 . - . ID=gene1593;Dbxref=EcoGene:EG13830,GeneID:946095;Name=ydfR;gbkey=Gene;gene=ydfR;gene_biotype=protein_coding;gene_synonym=ECK1549,JW1547;locus_tag=b1555 NC_000913.3 RefSeq CDS 1640054 1640365 . - 0 ID=cds1543;Parent=gene1593;Dbxref=ASAP:ABE-0005192,UniProtKB/Swiss-Prot:P76160,Genbank:NP_416073.1,EcoGene:EG13830,GeneID:946095;Name=NP_416073.1;gbkey=CDS;gene=ydfR;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416073.1;transl_table=11 NC_000913.3 RefSeq gene 1640370 1640585 . - . ID=gene1594;Dbxref=EcoGene:EG13831,GeneID:946093;Name=essQ;gbkey=Gene;gene=essQ;gene_biotype=protein_coding;gene_synonym=ECK1550,JW5255,ydfS;locus_tag=b1556 NC_000913.3 RefSeq CDS 1640370 1640585 . - 0 ID=cds1544;Parent=gene1594;Dbxref=ASAP:ABE-0005197,UniProtKB/Swiss-Prot:P77237,Genbank:NP_416074.4,EcoGene:EG13831,GeneID:946093;Name=NP_416074.4;gbkey=CDS;gene=essQ;product=Qin prophage%3B putative S lysis protein;protein_id=NP_416074.4;transl_table=11 NC_000913.3 RefSeq gene 1641339 1641554 . - . ID=gene1595;Dbxref=EcoGene:EG12203,GeneID:946091;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;gene_synonym=ECK1551,JW1549;locus_tag=b1557 NC_000913.3 RefSeq CDS 1641339 1641554 . - 0 ID=cds1545;Parent=gene1595;Dbxref=ASAP:ABE-0005199,UniProtKB/Swiss-Prot:P36995,Genbank:NP_416075.1,EcoGene:EG12203,GeneID:946091;Name=NP_416075.1;gbkey=CDS;gene=cspB;product=Qin prophage%3B cold shock protein;protein_id=NP_416075.1;transl_table=11 NC_000913.3 RefSeq gene 1641855 1642067 . + . ID=gene1596;Dbxref=EcoGene:EG12205,GeneID:946090;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;gene_synonym=ECK1552,JW1550;locus_tag=b1558 NC_000913.3 RefSeq CDS 1641855 1642067 . + 0 ID=cds1546;Parent=gene1596;Dbxref=ASAP:ABE-0005205,UniProtKB/Swiss-Prot:P0A976,Genbank:NP_416076.1,EcoGene:EG12205,GeneID:946090;Name=NP_416076.1;gbkey=CDS;gene=cspF;product=Qin prophage%3B cold shock protein;protein_id=NP_416076.1;transl_table=11 NC_000913.3 RefSeq gene 1642489 1643241 . - . ID=gene1597;Dbxref=EcoGene:EG13832,GeneID:946103;Name=quuQ;gbkey=Gene;gene=quuQ;gene_biotype=protein_coding;gene_synonym=ECK1553,JW1551,ydfT;locus_tag=b1559 NC_000913.3 RefSeq CDS 1642489 1643241 . - 0 ID=cds1547;Parent=gene1597;Dbxref=ASAP:ABE-0005207,UniProtKB/Swiss-Prot:P76161,Genbank:NP_416077.4,EcoGene:EG13832,GeneID:946103;Name=NP_416077.4;gbkey=CDS;gene=quuQ;product=Qin prophage%3B putative antitermination protein Q;protein_id=NP_416077.4;transl_table=11 NC_000913.3 RefSeq gene 1643255 1644304 . - . ID=gene1598;Dbxref=EcoGene:EG13833,GeneID:946108;Name=ydfU;gbkey=Gene;gene=ydfU;gene_biotype=protein_coding;gene_synonym=ECK1554,JW5909;locus_tag=b1560 NC_000913.3 RefSeq CDS 1643255 1644304 . - 0 ID=cds1548;Parent=gene1598;Dbxref=ASAP:ABE-0005209,UniProtKB/Swiss-Prot:P76162,Genbank:NP_416078.4,EcoGene:EG13833,GeneID:946108;Name=NP_416078.4;gbkey=CDS;gene=ydfU;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416078.4;transl_table=11 NC_000913.3 RefSeq gene 1644651 1644902 . - . ID=gene1599;Dbxref=EcoGene:EG11129,GeneID:946109;Name=rem;gbkey=Gene;gene=rem;gene_biotype=protein_coding;gene_synonym=ECK1555,JW1553;locus_tag=b1561 NC_000913.3 RefSeq CDS 1644651 1644902 . - 0 ID=cds1549;Parent=gene1599;Dbxref=ASAP:ABE-0005215,UniProtKB/Swiss-Prot:P07010,Genbank:NP_416079.1,EcoGene:EG11129,GeneID:946109;Name=NP_416079.1;gbkey=CDS;gene=rem;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416079.1;transl_table=11 NC_000913.3 RefSeq gene 1645119 1645274 . - . ID=gene1600;Dbxref=EcoGene:EG11130,GeneID:948616;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;gene_synonym=ECK1556,JW1554,relF;locus_tag=b1562 NC_000913.3 RefSeq CDS 1645119 1645274 . - 0 ID=cds1550;Parent=gene1600;Dbxref=ASAP:ABE-0005219,UniProtKB/Swiss-Prot:P0ACG6,Genbank:NP_416080.1,EcoGene:EG11130,GeneID:948616;Name=NP_416080.1;Note=polypeptide destructive to membrane potential~hokD (relF) regulatory elements are deleted%2C and the gene is fused to the relBE transcript%3B evolutionary relic?;gbkey=CDS;gene=hokD;product=Qin prophage%3B small toxic polypeptide;protein_id=NP_416080.1;transl_table=11 NC_000913.3 RefSeq gene 1645346 1645633 . - . ID=gene1601;Dbxref=EcoGene:EG11131,GeneID:947549;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;gene_synonym=ECK1557,JW1555;locus_tag=b1563 NC_000913.3 RefSeq CDS 1645346 1645633 . - 0 ID=cds1551;Parent=gene1601;Dbxref=ASAP:ABE-0005221,UniProtKB/Swiss-Prot:P0C077,Genbank:NP_416081.1,EcoGene:EG11131,GeneID:947549;Name=NP_416081.1;gbkey=CDS;gene=relE;product=Qin prophage%3B toxin of the RelE-RelB toxin-antitoxin system;protein_id=NP_416081.1;transl_table=11 NC_000913.3 RefSeq gene 1645633 1645872 . - . ID=gene1602;Dbxref=EcoGene:EG10836,GeneID:948308;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;gene_synonym=ECK1558,JW1556,RC;locus_tag=b1564 NC_000913.3 RefSeq CDS 1645633 1645872 . - 0 ID=cds1552;Parent=gene1602;Dbxref=ASAP:ABE-0005224,UniProtKB/Swiss-Prot:P0C079,Genbank:NP_416082.1,EcoGene:EG10836,GeneID:948308;Name=NP_416082.1;Note=negative regulator of translation;gbkey=CDS;gene=relB;product=antitoxin of the RelE-RelB toxin-antitoxin syste%3B transcriptional repressor;protein_id=NP_416082.1;transl_table=11 NC_000913.3 RefSeq gene 1645897 1646202 . + . ID=gene1603;Dbxref=EcoGene:EG13834,GeneID:948801;Name=ydfV;gbkey=Gene;gene=ydfV;gene_biotype=protein_coding;gene_synonym=ECK1559,JW1557;locus_tag=b1565 NC_000913.3 RefSeq CDS 1645897 1646202 . + 0 ID=cds1553;Parent=gene1603;Dbxref=ASAP:ABE-0005231,UniProtKB/Swiss-Prot:P76163,Genbank:NP_416083.1,EcoGene:EG13834,GeneID:948801;Name=NP_416083.1;gbkey=CDS;gene=ydfV;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416083.1;transl_table=11 NC_000913.3 RefSeq gene 1646405 1646737 . + . ID=gene1604;Dbxref=EcoGene:EG13429,GeneID:947392;Name=flxA;gbkey=Gene;gene=flxA;gene_biotype=protein_coding;gene_synonym=ECK1560,JW1558;locus_tag=b1566 NC_000913.3 RefSeq CDS 1646405 1646737 . + 0 ID=cds1554;Parent=gene1604;Dbxref=ASAP:ABE-0005234,UniProtKB/Swiss-Prot:P77609,Genbank:NP_416084.1,EcoGene:EG13429,GeneID:947392;Name=NP_416084.1;gbkey=CDS;gene=flxA;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416084.1;transl_table=11 NC_000913.3 RefSeq gene 1647174 1647356 . - . ID=gene1605;Dbxref=EcoGene:EG13835,GeneID:946111;Name=intK;gbkey=Gene;gene=intK;gene_biotype=pseudogene;gene_synonym=ECK1561,JW1559,ydfW;locus_tag=b1567;pseudo=true NC_000913.3 RefSeq CDS 1647174 1647356 . - 0 ID=cds1555;Parent=gene1605;Dbxref=ASAP:ABE-0005236,UniProtKB/Swiss-Prot:P76164,EcoGene:EG13835,GeneID:946111;Note=pseudogene%2C integrase fragment%2C Qin prophage%3BPhage or Prophage Related;gbkey=CDS;gene=intK;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1647358 1647636 . - . ID=gene1606;Dbxref=EcoGene:EG13836,GeneID:946112;Name=ydfX;gbkey=Gene;gene=ydfX;gene_biotype=pseudogene;gene_synonym=ECK1562,JW1560;locus_tag=b1568;pseudo=true NC_000913.3 RefSeq CDS 1647358 1647636 . - 0 ID=cds1556;Parent=gene1606;Dbxref=ASAP:ABE-0005239,UniProtKB/Swiss-Prot:P76165,EcoGene:EG13836,GeneID:946112;Note=pseudogene%2C Qin prophage%3BPhage or Prophage Related;gbkey=CDS;gene=ydfX;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1647620 1647850 . - . ID=gene1607;Dbxref=EcoGene:EG10228,GeneID:946120;Name=dicC;gbkey=Gene;gene=dicC;gene_biotype=protein_coding;gene_synonym=ECK1563,ftsT,JW1561;locus_tag=b1569 NC_000913.3 RefSeq CDS 1647620 1647850 . - 0 ID=cds1557;Parent=gene1607;Dbxref=ASAP:ABE-0005244,UniProtKB/Swiss-Prot:P06965,Genbank:NP_416087.1,EcoGene:EG10228,GeneID:946120;Name=NP_416087.1;Note=regulator of dicB;gbkey=CDS;gene=dicC;product=Qin prophage%3B DNA-binding transcriptional regulator for DicB;protein_id=NP_416087.1;transl_table=11 NC_000913.3 RefSeq gene 1647934 1648341 . + . ID=gene1608;Dbxref=EcoGene:EG10226,GeneID:946241;Name=dicA;gbkey=Gene;gene=dicA;gene_biotype=protein_coding;gene_synonym=ECK1564,ftsT,JW1562;locus_tag=b1570 NC_000913.3 RefSeq CDS 1647934 1648341 . + 0 ID=cds1558;Parent=gene1608;Dbxref=ASAP:ABE-0005248,UniProtKB/Swiss-Prot:P06966,Genbank:NP_416088.1,EcoGene:EG10226,GeneID:946241;Name=NP_416088.1;Note=regulator of dicB;gbkey=CDS;gene=dicA;product=Qin prophage%3B putative regulator for DicB;protein_id=NP_416088.1;transl_table=11 NC_000913.3 RefSeq gene 1648508 1648663 . + . ID=gene1609;Dbxref=EcoGene:EG11300,GeneID:946082;Name=ydfA;gbkey=Gene;gene=ydfA;gene_biotype=protein_coding;gene_synonym=ECK1565,JW1563;locus_tag=b1571 NC_000913.3 RefSeq CDS 1648508 1648663 . + 0 ID=cds1559;Parent=gene1609;Dbxref=ASAP:ABE-0005251,UniProtKB/Swiss-Prot:P0ACW8,Genbank:NP_416089.1,EcoGene:EG11300,GeneID:946082;Name=NP_416089.1;gbkey=CDS;gene=ydfA;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416089.1;transl_table=11 NC_000913.3 RefSeq gene 1648665 1648793 . + . ID=gene1610;Dbxref=EcoGene:EG11301,GeneID:946176;Name=ydfB;gbkey=Gene;gene=ydfB;gene_biotype=protein_coding;gene_synonym=ECK1566,JW1564;locus_tag=b1572 NC_000913.3 RefSeq CDS 1648665 1648793 . + 0 ID=cds1560;Parent=gene1610;Dbxref=ASAP:ABE-0005253,UniProtKB/Swiss-Prot:P29009,Genbank:NP_416090.2,EcoGene:EG11301,GeneID:946176;Name=NP_416090.2;gbkey=CDS;gene=ydfB;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416090.2;transl_table=11 NC_000913.3 RefSeq gene 1648823 1649041 . + . ID=gene1611;Dbxref=EcoGene:EG11302,GeneID:946107;Name=ydfC;gbkey=Gene;gene=ydfC;gene_biotype=protein_coding;gene_synonym=ECK1567,JW1565;locus_tag=b1573 NC_000913.3 RefSeq CDS 1648823 1649041 . + 0 ID=cds1561;Parent=gene1611;Dbxref=ASAP:ABE-0005255,UniProtKB/Swiss-Prot:P21418,Genbank:NP_416091.1,EcoGene:EG11302,GeneID:946107;Name=NP_416091.1;gbkey=CDS;gene=ydfC;product=uncharacterized protein%2C Qin prophage;protein_id=NP_416091.1;transl_table=11 NC_000913.3 RefSeq gene 1649382 1649434 . + . ID=gene1612;Dbxref=EcoGene:EG31115,GeneID:946140;Name=dicF;gbkey=Gene;gene=dicF;gene_biotype=antisense_RNA;gene_synonym=ECK1568,JWR0030;locus_tag=b1574 NC_000913.3 RefSeq ncRNA 1649382 1649434 . + . ID=rna49;Parent=gene1612;Dbxref=ASAP:ABE-0005257,EcoGene:EG31115,GeneID:946140;Note=DicF antisense RNA%2C inhibits ftsZ translation;gbkey=ncRNA;gene=dicF;ncrna_class=antisense_RNA;product=sRNA antisense regulator%2C inhibits ftsZ%2C Hfq-dependent%3B Qin prophage NC_000913.3 RefSeq exon 1649382 1649434 . + . ID=id205;Parent=rna49;Dbxref=ASAP:ABE-0005257,EcoGene:EG31115,GeneID:946140;Note=DicF antisense RNA%2C inhibits ftsZ translation;gbkey=ncRNA;gene=dicF;ncrna_class=antisense_RNA;product=sRNA antisense regulator%2C inhibits ftsZ%2C Hfq-dependent%3B Qin prophage NC_000913.3 RefSeq gene 1649609 1649797 . + . ID=gene1613;Dbxref=EcoGene:EG10227,GeneID:946110;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;gene_synonym=ECK1569,ftsT,JW1566;locus_tag=b1575 NC_000913.3 RefSeq CDS 1649609 1649797 . + 0 ID=cds1562;Parent=gene1613;Dbxref=ASAP:ABE-0005260,UniProtKB/Swiss-Prot:P09557,Genbank:NP_416092.1,EcoGene:EG10227,GeneID:946110;Name=NP_416092.1;Note=inhibition of cell division;gbkey=CDS;gene=dicB;product=Qin prophage%3B cell division inhibition protein;protein_id=NP_416092.1;transl_table=11 NC_000913.3 RefSeq gene 1649794 1649985 . + . ID=gene1614;Dbxref=EcoGene:EG11303,GeneID:946102;Name=ydfD;gbkey=Gene;gene=ydfD;gene_biotype=protein_coding;gene_synonym=ECK1570,JW1567;locus_tag=b1576 NC_000913.3 RefSeq CDS 1649794 1649985 . + 0 ID=cds1563;Parent=gene1614;Dbxref=ASAP:ABE-0005262,UniProtKB/Swiss-Prot:P29010,Genbank:NP_416093.1,EcoGene:EG11303,GeneID:946102;Name=NP_416093.1;gbkey=CDS;gene=ydfD;product=Qin prophage%3B uncharacterized protein;protein_id=NP_416093.1;transl_table=11 NC_000913.3 RefSeq gene 1650078 1650842 . + . ID=gene1615;Dbxref=EcoGene:EG11304,GeneID:946113;Name=ydfE;gbkey=Gene;gene=ydfE;gene_biotype=pseudogene;gene_synonym=ECK1571,JW1568;locus_tag=b1577;pseudo=true NC_000913.3 RefSeq CDS 1650078 1650842 . + 0 ID=cds1564;Parent=gene1615;Dbxref=ASAP:ABE-0005265,UniProtKB/Swiss-Prot:Q47138,EcoGene:EG11304,GeneID:946113;Note=Qin prophage%3B pseudogene%3BPhage or Prophage Related;gbkey=CDS;gene=ydfE;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 1650843 1651548 . + . ID=id206;gbkey=mobile_element NC_000913.3 RefSeq gene 1650845 1651537 . + . ID=gene1616;Dbxref=EcoGene:EG40004,GeneID:946118;Name=insD1;gbkey=Gene;gene=insD1;gene_biotype=pseudogene;gene_synonym=ECK0358;locus_tag=b1578;pseudo=true NC_000913.3 RefSeq CDS 1650845 1651537 . + 0 ID=cds1565;Parent=gene1616;Dbxref=ASAP:ABE-0005268,UniProtKB/Swiss-Prot:P0CF60,EcoGene:EG40004,GeneID:946118;Note=IS2 transposase TnpB%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insD1;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1651551 1652708 . + . ID=gene1617;Dbxref=EcoGene:EG13188,GeneID:946130;Name=intQ;gbkey=Gene;gene=intQ;gene_biotype=pseudogene;gene_synonym=ECK1573,JW1571;locus_tag=b1579;pseudo=true NC_000913.3 RefSeq CDS 1651551 1652708 . + 0 ID=cds1566;Parent=gene1617;Dbxref=ASAP:ABE-0005270,UniProtKB/Swiss-Prot:P76168,EcoGene:EG13188,GeneID:946130;Note=pseudogene%2C Qin prophage%3B phage integrase family%3BPhage or Prophage Related;gbkey=CDS;gene=intQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1652896 1653915 . - . ID=gene1618;Dbxref=EcoGene:EG12452,GeneID:946127;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;gene_synonym=ECK1575,JW1572;locus_tag=b1580 NC_000913.3 RefSeq CDS 1652896 1653915 . - 0 ID=cds1567;Parent=gene1618;Dbxref=ASAP:ABE-0005272,UniProtKB/Swiss-Prot:P38105,Genbank:NP_416097.1,EcoGene:EG12452,GeneID:946127;Name=NP_416097.1;Note=starvation sensing protein;gbkey=CDS;gene=rspB;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=NP_416097.1;transl_table=11 NC_000913.3 RefSeq gene 1653927 1655141 . - . ID=gene1619;Dbxref=EcoGene:EG12451,GeneID:946126;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;gene_synonym=ECK1576,JW1573;locus_tag=b1581 NC_000913.3 RefSeq CDS 1653927 1655141 . - 0 ID=cds1568;Parent=gene1619;Dbxref=ASAP:ABE-0005275,UniProtKB/Swiss-Prot:P38104,Genbank:NP_416098.1,EcoGene:EG12451,GeneID:946126;Name=NP_416098.1;Note=starvation sensing protein;gbkey=CDS;gene=rspA;product=bifunctional D-altronate/D-mannonate dehydratase;protein_id=NP_416098.1;transl_table=11 NC_000913.3 RefSeq gene 1655347 1655673 . - . ID=gene1620;Dbxref=EcoGene:EG13839,GeneID:946125;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;gene_synonym=ECK1577,JW1574;locus_tag=b1582 NC_000913.3 RefSeq CDS 1655347 1655673 . - 0 ID=cds1569;Parent=gene1620;Dbxref=ASAP:ABE-0005279,UniProtKB/Swiss-Prot:P76169,Genbank:NP_416099.1,EcoGene:EG13839,GeneID:946125;Name=NP_416099.1;gbkey=CDS;gene=ynfA;product=UPF0060 family inner membrane protein;protein_id=NP_416099.1;transl_table=11 NC_000913.3 RefSeq gene 1655808 1656149 . + . ID=gene1621;Dbxref=EcoGene:EG13840,GeneID:946119;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;gene_synonym=ECK1578,JW1575;locus_tag=b1583 NC_000913.3 RefSeq CDS 1655808 1656149 . + 0 ID=cds1570;Parent=gene1621;Dbxref=ASAP:ABE-0005284,UniProtKB/Swiss-Prot:P76170,Genbank:NP_416100.1,EcoGene:EG13840,GeneID:946119;Name=NP_416100.1;gbkey=CDS;gene=ynfB;product=UPF0482 family putative periplasmic protein;protein_id=NP_416100.1;transl_table=11 NC_000913.3 RefSeq gene 1656184 1656744 . + . ID=gene1622;Dbxref=EcoGene:EG12447,GeneID:946117;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;gene_synonym=ECK1579,JW1576;locus_tag=b1584 NC_000913.3 RefSeq CDS 1656184 1656744 . + 0 ID=cds1571;Parent=gene1622;Dbxref=ASAP:ABE-0005286,UniProtKB/Swiss-Prot:P0A951,Genbank:NP_416101.1,EcoGene:EG12447,GeneID:946117;Name=NP_416101.1;gbkey=CDS;gene=speG;product=spermidine N(1)-acetyltransferase;protein_id=NP_416101.1;transl_table=11 NC_000913.3 RefSeq gene 1656747 1657457 . - . ID=gene1623;Dbxref=EcoGene:EG13841,GeneID:946131;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;gene_synonym=ECK1580,JW5258;locus_tag=b1585 NC_000913.3 RefSeq CDS 1656747 1657457 . - 0 ID=cds1572;Parent=gene1623;Dbxref=ASAP:ABE-0005288,UniProtKB/Swiss-Prot:P67553,Genbank:NP_416102.2,EcoGene:EG13841,GeneID:946131;Name=NP_416102.2;gbkey=CDS;gene=ynfC;product=UPF0257 family lipoprotein;protein_id=NP_416102.2;transl_table=11 NC_000913.3 RefSeq gene 1657565 1657870 . + . ID=gene1624;Dbxref=EcoGene:EG13842,GeneID:946133;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;gene_synonym=ECK1581,JW5259;locus_tag=b1586 NC_000913.3 RefSeq CDS 1657565 1657870 . + 0 ID=cds1573;Parent=gene1624;Dbxref=ASAP:ABE-0005297,UniProtKB/Swiss-Prot:P76172,Genbank:NP_416103.2,EcoGene:EG13842,GeneID:946133;Name=NP_416103.2;gbkey=CDS;gene=ynfD;product=DUF1161 family periplasmic protein;protein_id=NP_416103.2;transl_table=11 NC_000913.3 RefSeq repeat_region 1657888 1657908 . + . ID=id207;Note=REP124 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1658069 1660495 . + . ID=gene1625;Dbxref=EcoGene:EG13843,GeneID:946135;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;gene_synonym=ECK1582,JW1579;locus_tag=b1587 NC_000913.3 RefSeq CDS 1658069 1660495 . + 0 ID=cds1574;Parent=gene1625;Dbxref=ASAP:ABE-0005302,UniProtKB/Swiss-Prot:P77374,Genbank:NP_416104.1,EcoGene:EG13843,GeneID:946135;Name=NP_416104.1;gbkey=CDS;gene=ynfE;product=putative selenate reductase%2C periplasmic;protein_id=NP_416104.1;transl_table=11 NC_000913.3 RefSeq gene 1660556 1662979 . + . ID=gene1626;Dbxref=EcoGene:EG13844,GeneID:945268;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;gene_synonym=ECK1583,JW5260;locus_tag=b1588 NC_000913.3 RefSeq CDS 1660556 1662979 . + 0 ID=cds1575;Parent=gene1626;Dbxref=ASAP:ABE-0005307,UniProtKB/Swiss-Prot:P77783,Genbank:NP_416105.4,EcoGene:EG13844,GeneID:945268;Name=NP_416105.4;gbkey=CDS;gene=ynfF;product=S- and N-oxide reductase%2C A subunit%2C periplasmic;protein_id=NP_416105.4;transl_table=11 NC_000913.3 RefSeq gene 1662990 1663607 . + . ID=gene1627;Dbxref=EcoGene:EG13845,GeneID:945638;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;gene_synonym=ECK1584,JW1581;locus_tag=b1589 NC_000913.3 RefSeq CDS 1662990 1663607 . + 0 ID=cds1576;Parent=gene1627;Dbxref=ASAP:ABE-0005309,UniProtKB/Swiss-Prot:P0AAJ1,Genbank:NP_416106.1,EcoGene:EG13845,GeneID:945638;Name=NP_416106.1;gbkey=CDS;gene=ynfG;product=oxidoreductase%2C Fe-S subunit;protein_id=NP_416106.1;transl_table=11 NC_000913.3 RefSeq gene 1663609 1664463 . + . ID=gene1628;Dbxref=EcoGene:EG13846,GeneID:945822;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;gene_synonym=ECK1585,JW5261;locus_tag=b1590 NC_000913.3 RefSeq CDS 1663609 1664463 . + 0 ID=cds1577;Parent=gene1628;Dbxref=ASAP:ABE-0005311,UniProtKB/Swiss-Prot:P76173,Genbank:NP_416107.1,EcoGene:EG13846,GeneID:945822;Name=NP_416107.1;gbkey=CDS;gene=ynfH;product=oxidoreductase%2C membrane subunit;protein_id=NP_416107.1;transl_table=11 NC_000913.3 RefSeq gene 1664506 1665120 . + . ID=gene1629;Dbxref=EcoGene:EG13847,GeneID:945987;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;gene_synonym=ECK1586,JW5262,ynfI;locus_tag=b1591 NC_000913.3 RefSeq CDS 1664506 1665120 . + 0 ID=cds1578;Parent=gene1629;Dbxref=ASAP:ABE-0005314,UniProtKB/Swiss-Prot:P69853,Genbank:NP_416108.2,EcoGene:EG13847,GeneID:945987;Name=NP_416108.2;gbkey=CDS;gene=dmsD;product=twin-argninine leader-binding protein for DmsA and TorA;protein_id=NP_416108.2;transl_table=11 NC_000913.3 RefSeq repeat_region 1665136 1665166 . + . ID=id208;Note=REP125 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1665315 1666571 . + . ID=gene1630;Dbxref=EcoGene:EG13848,GeneID:947179;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;gene_synonym=ECK1587,JW5263,mriT,ynfJ;locus_tag=b1592 NC_000913.3 RefSeq CDS 1665315 1666571 . + 0 ID=cds1579;Parent=gene1630;Dbxref=ASAP:ABE-0005317,UniProtKB/Swiss-Prot:P76175,Genbank:NP_416109.2,EcoGene:EG13848,GeneID:947179;Name=NP_416109.2;gbkey=CDS;gene=clcB;product=H(+)/Cl(-) exchange transporter;protein_id=NP_416109.2;transl_table=11 NC_000913.3 RefSeq gene 1666524 1667219 . - . ID=gene1631;Dbxref=EcoGene:EG13849,GeneID:944927;Name=ynfK;gbkey=Gene;gene=ynfK;gene_biotype=protein_coding;gene_synonym=ECK1588,JW5264;locus_tag=b1593 NC_000913.3 RefSeq CDS 1666524 1667219 . - 0 ID=cds1580;Parent=gene1631;Dbxref=ASAP:ABE-0005319,UniProtKB/Swiss-Prot:P0A6E9,Genbank:NP_416110.4,EcoGene:EG13849,GeneID:944927;Name=NP_416110.4;gbkey=CDS;gene=ynfK;product=putative dethiobiotin synthetase;protein_id=NP_416110.4;transl_table=11 NC_000913.3 RefSeq gene 1667344 1668564 . - . ID=gene1632;Dbxref=EcoGene:EG13156,GeneID:945510;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA,ECK1589,JW1586;locus_tag=b1594 NC_000913.3 RefSeq CDS 1667344 1668564 . - 0 ID=cds1581;Parent=gene1632;Dbxref=ASAP:ABE-0005323,UniProtKB/Swiss-Prot:P50456,Genbank:NP_416111.1,EcoGene:EG13156,GeneID:945510;Name=NP_416111.1;Note=putative NAGC-like transcriptional regulator;gbkey=CDS;gene=mlc;product=glucosamine anaerobic growth regulon transcriptional repressor%3B autorepressor;protein_id=NP_416111.1;transl_table=11 NC_000913.3 RefSeq gene 1668699 1669592 . - . ID=gene1633;Dbxref=EcoGene:EG13850,GeneID:946136;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;gene_synonym=ECK1590,JW1587;locus_tag=b1595 NC_000913.3 RefSeq CDS 1668699 1669592 . - 0 ID=cds1582;Parent=gene1633;Dbxref=ASAP:ABE-0005326,UniProtKB/Swiss-Prot:P77559,Genbank:NP_416112.1,EcoGene:EG13850,GeneID:946136;Name=NP_416112.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ynfL;product=LysR family putative transcriptional regulator;protein_id=NP_416112.1;transl_table=11 NC_000913.3 RefSeq gene 1669699 1670952 . + . ID=gene1634;Dbxref=EcoGene:EG12951,GeneID:946138;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;gene_synonym=ECK1591,JW1588,yzyC;locus_tag=b1596 NC_000913.3 RefSeq CDS 1669699 1670952 . + 0 ID=cds1583;Parent=gene1634;Dbxref=ASAP:ABE-0005333,UniProtKB/Swiss-Prot:P43531,Genbank:NP_416113.1,EcoGene:EG12951,GeneID:946138;Name=NP_416113.1;Note=putative transport protein;gbkey=CDS;gene=ynfM;product=putative arabinose efflux transporter;protein_id=NP_416113.1;transl_table=11 NC_000913.3 RefSeq gene 1671376 1671684 . + . ID=gene1635;Dbxref=EcoGene:EG12149,GeneID:945103;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;gene_synonym=ECK1592,JW5826;locus_tag=b1597 NC_000913.3 RefSeq CDS 1671376 1671684 . + 0 ID=cds1584;Parent=gene1635;Dbxref=ASAP:ABE-0005337,UniProtKB/Swiss-Prot:P36560,Genbank:NP_416114.2,EcoGene:EG12149,GeneID:945103;Name=NP_416114.2;Note=acid shock protein;gbkey=CDS;gene=asr;product=acid shock-inducible periplasmic protein;protein_id=NP_416114.2;transl_table=11 NC_000913.3 RefSeq gene 1671777 1671860 . + . ID=gene1636;Dbxref=EcoGene:EG14462,GeneID:5061510;Name=ydgU;gbkey=Gene;gene=ydgU;gene_biotype=protein_coding;gene_synonym=ECK4410;locus_tag=b4601 NC_000913.3 RefSeq CDS 1671777 1671860 . + 0 ID=cds1585;Parent=gene1636;Dbxref=UniProtKB/Swiss-Prot:A5A617,Genbank:YP_001165320.1,EcoGene:EG14462,GeneID:5061510;Name=YP_001165320.1;gbkey=CDS;gene=ydgU;product=stationary phase-induced protein;protein_id=YP_001165320.1;transl_table=11 NC_000913.3 RefSeq gene 1671960 1672781 . + . ID=gene1637;Dbxref=EcoGene:EG13925,GeneID:946436;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;gene_synonym=ECK1593,JW1590;locus_tag=b1598 NC_000913.3 RefSeq CDS 1671960 1672781 . + 0 ID=cds1586;Parent=gene1637;Dbxref=ASAP:ABE-0005340,UniProtKB/Swiss-Prot:P76176,Genbank:NP_416115.1,EcoGene:EG13925,GeneID:946436;Name=NP_416115.1;gbkey=CDS;gene=ydgD;product=putative peptidase;protein_id=NP_416115.1;transl_table=11 NC_000913.3 RefSeq gene 1672820 1673149 . - . ID=gene1638;Dbxref=EcoGene:EG13926,GeneID:947333;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;gene_synonym=ECK1594,JW1591,ydgE;locus_tag=b1599 NC_000913.3 RefSeq CDS 1672820 1673149 . - 0 ID=cds1587;Parent=gene1638;Dbxref=ASAP:ABE-0005343,UniProtKB/Swiss-Prot:P69210,Genbank:NP_416116.1,EcoGene:EG13926,GeneID:947333;Name=NP_416116.1;Note=possible chaperone;gbkey=CDS;gene=mdtI;product=multidrug efflux system transporter;protein_id=NP_416116.1;transl_table=11 NC_000913.3 RefSeq gene 1673136 1673501 . - . ID=gene1639;Dbxref=EcoGene:EG13927,GeneID:946139;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;gene_synonym=ECK1595,JW1592,ydgF;locus_tag=b1600 NC_000913.3 RefSeq CDS 1673136 1673501 . - 0 ID=cds1588;Parent=gene1639;Dbxref=ASAP:ABE-0005345,UniProtKB/Swiss-Prot:P69212,Genbank:NP_416117.1,EcoGene:EG13927,GeneID:946139;Name=NP_416117.1;Note=possible chaperone;gbkey=CDS;gene=mdtJ;product=multidrug efflux system transporter;protein_id=NP_416117.1;transl_table=11 NC_000913.3 RefSeq gene 1673913 1674947 . + . ID=gene1640;Dbxref=EcoGene:EG13928,GeneID:946142;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ECK1596,JW1593,ydgG;locus_tag=b1601 NC_000913.3 RefSeq CDS 1673913 1674947 . + 0 ID=cds1589;Parent=gene1640;Dbxref=ASAP:ABE-0005350,UniProtKB/Swiss-Prot:P0AFS5,Genbank:NP_416118.1,EcoGene:EG13928,GeneID:946142;Name=NP_416118.1;Note=putative transport protein;gbkey=CDS;gene=tqsA;product=pheromone AI-2 transporter;protein_id=NP_416118.1;transl_table=11 NC_000913.3 RefSeq gene 1674972 1676360 . - . ID=gene1641;Dbxref=EcoGene:EG10745,GeneID:946144;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;gene_synonym=ECK1597,JW1594;locus_tag=b1602 NC_000913.3 RefSeq CDS 1674972 1676360 . - 0 ID=cds1590;Parent=gene1641;Dbxref=ASAP:ABE-0005352,UniProtKB/Swiss-Prot:P0AB67,Genbank:NP_416119.1,EcoGene:EG10745,GeneID:946144;Name=NP_416119.1;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase%2C beta subunit;protein_id=NP_416119.1;transl_table=11 NC_000913.3 RefSeq gene 1676371 1677903 . - . ID=gene1642;Dbxref=EcoGene:EG10744,GeneID:946628;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;gene_synonym=ECK1598,JW1595;locus_tag=b1603 NC_000913.3 RefSeq CDS 1676371 1677903 . - 0 ID=cds1591;Parent=gene1642;Dbxref=ASAP:ABE-0005354,UniProtKB/Swiss-Prot:P07001,Genbank:NP_416120.1,EcoGene:EG10744,GeneID:946628;Name=NP_416120.1;gbkey=CDS;gene=pntA;product=pyridine nucleotide transhydrogenase%2C alpha subunit;protein_id=NP_416120.1;transl_table=11 NC_000913.3 RefSeq gene 1678427 1679371 . + . ID=gene1643;Dbxref=EcoGene:EG13929,GeneID:945117;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;gene_synonym=ECK1599,JW1596;locus_tag=b1604 NC_000913.3 RefSeq CDS 1678427 1679371 . + 0 ID=cds1592;Parent=gene1643;Dbxref=ASAP:ABE-0005359,UniProtKB/Swiss-Prot:P76177,Genbank:NP_416121.1,EcoGene:EG13929,GeneID:945117;Name=NP_416121.1;gbkey=CDS;gene=ydgH;product=DUF1471 family periplasmic protein;protein_id=NP_416121.1;transl_table=11 NC_000913.3 RefSeq gene 1679557 1680939 . + . ID=gene1644;Dbxref=EcoGene:EG13930,GeneID:945159;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;gene_synonym=arcD,ECK1600,JW1597;locus_tag=b1605 NC_000913.3 RefSeq CDS 1679557 1680939 . + 0 ID=cds1593;Parent=gene1644;Dbxref=ASAP:ABE-0005362,UniProtKB/Swiss-Prot:P0AAE5,Genbank:NP_416122.1,EcoGene:EG13930,GeneID:945159;Name=NP_416122.1;Note=putative arginine/ornithine antiporter;gbkey=CDS;gene=ydgI;product=putative arginine/ornithine antiporter transporter;protein_id=NP_416122.1;transl_table=11 NC_000913.3 RefSeq gene 1680976 1681698 . + . ID=gene1645;Dbxref=EcoGene:EG13189,GeneID:949096;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;gene_synonym=ECK1601,JW1598,ydgB;locus_tag=b1606 NC_000913.3 RefSeq CDS 1680976 1681698 . + 0 ID=cds1594;Parent=gene1645;Dbxref=ASAP:ABE-0005364,UniProtKB/Swiss-Prot:P0AFS3,Genbank:NP_416123.1,EcoGene:EG13189,GeneID:949096;Name=NP_416123.1;Note=putative oxidoreductase;gbkey=CDS;gene=folM;product=dihydromonapterin reductase%2C NADPH-dependent%3B dihydrofolate reductase isozyme;protein_id=NP_416123.1;transl_table=11 NC_000913.3 RefSeq gene 1681695 1682030 . - . ID=gene1646;Dbxref=EcoGene:EG13191,GeneID:945156;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;gene_synonym=ECK1602,JW1599;locus_tag=b1607 NC_000913.3 RefSeq CDS 1681695 1682030 . - 0 ID=cds1595;Parent=gene1646;Dbxref=ASAP:ABE-0005366,UniProtKB/Swiss-Prot:P0ACX0,Genbank:NP_416124.1,EcoGene:EG13191,GeneID:945156;Name=NP_416124.1;gbkey=CDS;gene=ydgC;product=GlpM family inner membrane protein;protein_id=NP_416124.1;transl_table=11 NC_000913.3 RefSeq gene 1682159 1682878 . + . ID=gene1647;Dbxref=EcoGene:EG13190,GeneID:946199;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;gene_synonym=ECK1603,JW1600,urpT;locus_tag=b1608 NC_000913.3 RefSeq CDS 1682159 1682878 . + 0 ID=cds1596;Parent=gene1647;Dbxref=ASAP:ABE-0005370,UniProtKB/Swiss-Prot:P52108,Genbank:NP_416125.2,EcoGene:EG13190,GeneID:946199;Name=NP_416125.2;Note=response transcriptional regulatory protein (RstB sensor);gbkey=CDS;gene=rstA;product=response regulator of RstAB two-component system;protein_id=NP_416125.2;transl_table=11 NC_000913.3 RefSeq gene 1682882 1684183 . + . ID=gene1648;Dbxref=EcoGene:EG11233,GeneID:948870;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;gene_synonym=ECK1604,JW1601,uspT;locus_tag=b1609 NC_000913.3 RefSeq CDS 1682882 1684183 . + 0 ID=cds1597;Parent=gene1648;Dbxref=ASAP:ABE-0005372,UniProtKB/Swiss-Prot:P18392,Genbank:NP_416126.1,EcoGene:EG11233,GeneID:948870;Name=NP_416126.1;Note=sensor histidine protein kinase (RstA regulator);gbkey=CDS;gene=rstB;product=sensory histidine kinase of RstAB two-component system;protein_id=NP_416126.1;transl_table=11 NC_000913.3 RefSeq gene 1684259 1685188 . + . ID=gene1649;Dbxref=EcoGene:EG11038,GeneID:945135;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;gene_synonym=ECK1605,JW1602,tau;locus_tag=b1610 NC_000913.3 RefSeq CDS 1684259 1685188 . + 0 ID=cds1598;Parent=gene1649;Dbxref=ASAP:ABE-0005378,UniProtKB/Swiss-Prot:P16525,Genbank:NP_416127.1,EcoGene:EG11038,GeneID:945135;Name=NP_416127.1;Note=DNA-binding protein%3B inhibition of replication at Ter sites;gbkey=CDS;gene=tus;product=inhibitor of replication at Ter%2C DNA-binding protein;protein_id=NP_416127.1;transl_table=11 NC_000913.3 RefSeq gene 1685185 1686588 . - . ID=gene1650;Dbxref=EcoGene:EG10358,GeneID:946147;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;gene_synonym=ECK1606,JW1603;locus_tag=b1611 NC_000913.3 RefSeq CDS 1685185 1686588 . - 0 ID=cds1599;Parent=gene1650;Dbxref=ASAP:ABE-0005380,UniProtKB/Swiss-Prot:P05042,Genbank:NP_416128.1,EcoGene:EG10358,GeneID:946147;Name=NP_416128.1;Note=fumarase C%3D fumarate hydratase Class II%3B isozyme;gbkey=CDS;gene=fumC;product=fumarate hydratase (fumarase C)%2Caerobic Class II;protein_id=NP_416128.1;transl_table=11 NC_000913.3 RefSeq gene 1686731 1688377 . - . ID=gene1651;Dbxref=EcoGene:EG10356,GeneID:946826;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;gene_synonym=ECK1607,JW1604;locus_tag=b1612 NC_000913.3 RefSeq CDS 1686731 1688377 . - 0 ID=cds1600;Parent=gene1651;Dbxref=ASAP:ABE-0005392,UniProtKB/Swiss-Prot:P0AC33,Genbank:NP_416129.1,EcoGene:EG10356,GeneID:946826;Name=NP_416129.1;Note=fumarase A %3D fumarate hydratase Class I%3B aerobic isozyme;gbkey=CDS;gene=fumA;product=fumarate hydratase (fumarase A)%2C aerobic Class I;protein_id=NP_416129.1;transl_table=11 NC_000913.3 RefSeq gene 1688576 1689751 . + . ID=gene1652;Dbxref=EcoGene:EG10566,GeneID:944840;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;gene_synonym=ECK1608,JW1605,pmi;locus_tag=b1613 NC_000913.3 RefSeq CDS 1688576 1689751 . + 0 ID=cds1601;Parent=gene1652;Dbxref=ASAP:ABE-0005398,UniProtKB/Swiss-Prot:P00946,Genbank:NP_416130.3,EcoGene:EG10566,GeneID:944840;Name=NP_416130.3;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase;protein_id=NP_416130.3;transl_table=11 NC_000913.3 RefSeq gene 1689852 1691360 . + . ID=gene1653;Dbxref=EcoGene:EG12457,GeneID:946172;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;gene_synonym=ECK1609,JW1606;locus_tag=b1614 NC_000913.3 RefSeq CDS 1689852 1691360 . + 0 ID=cds1602;Parent=gene1653;Dbxref=ASAP:ABE-0005402,UniProtKB/Swiss-Prot:P77804,Genbank:NP_416131.1,EcoGene:EG12457,GeneID:946172;Name=NP_416131.1;gbkey=CDS;gene=ydgA;product=DUF945 family protein;protein_id=NP_416131.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1691425 1691521 . + . ID=id209;Note=RIP126 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1691586 1692851 . - . ID=gene1654;Dbxref=EcoGene:EG12668,GeneID:944820;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;gene_synonym=ECK1610,gusC,JW1607;locus_tag=b1615 NC_000913.3 RefSeq CDS 1691586 1692851 . - 0 ID=cds1603;Parent=gene1654;Dbxref=ASAP:ABE-0005405,UniProtKB/Swiss-Prot:Q47706,Genbank:NP_416132.2,EcoGene:EG12668,GeneID:944820;Name=NP_416132.2;Note=membrane-associated protein;gbkey=CDS;gene=uidC;product=putative outer membrane porin for beta-glucuronides porin protein;protein_id=NP_416132.2;transl_table=11 NC_000913.3 RefSeq gene 1692890 1694263 . - . ID=gene1655;Dbxref=EcoGene:EG11658,GeneID:947484;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;gene_synonym=ECK1611,gusB,JW1608,uidP;locus_tag=b1616 NC_000913.3 RefSeq CDS 1692890 1694263 . - 0 ID=cds1604;Parent=gene1655;Dbxref=ASAP:ABE-0005407,UniProtKB/Swiss-Prot:P0CE44,Genbank:NP_416133.1,EcoGene:EG11658,GeneID:947484;Name=NP_416133.1;Note=glucuronide permease;gbkey=CDS;gene=uidB;product=glucuronide transporter;protein_id=NP_416133.1;transl_table=11 NC_000913.3 RefSeq gene 1694260 1696071 . - . ID=gene1656;Dbxref=EcoGene:EG11055,GeneID:946149;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;gene_synonym=ECK1612,gurA,gusA,JW1609;locus_tag=b1617 NC_000913.3 RefSeq CDS 1694260 1696071 . - 0 ID=cds1605;Parent=gene1656;Dbxref=ASAP:ABE-0005410,UniProtKB/Swiss-Prot:P05804,Genbank:NP_416134.1,EcoGene:EG11055,GeneID:946149;Name=NP_416134.1;gbkey=CDS;gene=uidA;product=beta-D-glucuronidase;protein_id=NP_416134.1;transl_table=11 NC_000913.3 RefSeq gene 1696462 1697052 . - . ID=gene1657;Dbxref=EcoGene:EG12667,GeneID:946150;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;gene_synonym=ECK1613,gusR,JW1610;locus_tag=b1618 NC_000913.3 RefSeq CDS 1696462 1697052 . - 0 ID=cds1606;Parent=gene1657;Dbxref=ASAP:ABE-0005415,UniProtKB/Swiss-Prot:P0ACT6,Genbank:NP_416135.1,EcoGene:EG12667,GeneID:946150;Name=NP_416135.1;Note=repressor for uid operon;gbkey=CDS;gene=uidR;product=transcriptional repressor;protein_id=NP_416135.1;transl_table=11 NC_000913.3 RefSeq gene 1697273 1698040 . - . ID=gene1658;Dbxref=EcoGene:EG10425,GeneID:946151;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;gene_synonym=ECK1614,hsd,hsdH,JW1611;locus_tag=b1619 NC_000913.3 RefSeq CDS 1697273 1698040 . - 0 ID=cds1607;Parent=gene1658;Dbxref=ASAP:ABE-0005419,UniProtKB/Swiss-Prot:P0AET8,Genbank:NP_416136.1,EcoGene:EG10425,GeneID:946151;Name=NP_416136.1;Note=NAD-dependent 7alpha-hydroxysteroid dehydrogenase%2C dehydroxylation of bile acids;gbkey=CDS;gene=hdhA;product=7-alpha-hydroxysteroid dehydrogenase%2C NAD-dependent;protein_id=NP_416136.1;transl_table=11 NC_000913.3 RefSeq gene 1698152 1699180 . - . ID=gene1659;Dbxref=EcoGene:EG10557,GeneID:947104;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;gene_synonym=ECK1615,JW1612;locus_tag=b1620 NC_000913.3 RefSeq CDS 1698152 1699180 . - 0 ID=cds1608;Parent=gene1659;Dbxref=ASAP:ABE-0005421,UniProtKB/Swiss-Prot:P18811,Genbank:NP_416137.1,EcoGene:EG10557,GeneID:947104;Name=NP_416137.1;Note=maltose regulon regulatory protein;gbkey=CDS;gene=malI;product=transcriptional repressor of Mal regulon;protein_id=NP_416137.1;transl_table=11 NC_000913.3 RefSeq gene 1699355 1700947 . + . ID=gene1660;Dbxref=EcoGene:EG10563,GeneID:946009;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;gene_synonym=ECK1616,JW1613;locus_tag=b1621 NC_000913.3 RefSeq CDS 1699355 1700947 . + 0 ID=cds1609;Parent=gene1660;Dbxref=ASAP:ABE-0005429,UniProtKB/Swiss-Prot:P19642,Genbank:NP_416138.1,EcoGene:EG10563,GeneID:946009;Name=NP_416138.1;Note=PTS system%2C maltose and glucose-specific IIABC component;gbkey=CDS;gene=malX;product=maltose and glucose-specific PTS enzyme IIB component and IIC component;protein_id=NP_416138.1;transl_table=11 NC_000913.3 RefSeq gene 1700957 1702129 . + . ID=gene1661;Dbxref=EcoGene:EG10564,GeneID:945937;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;gene_synonym=ECK1617,JW1614;locus_tag=b1622 NC_000913.3 RefSeq CDS 1700957 1702129 . + 0 ID=cds1610;Parent=gene1661;Dbxref=ASAP:ABE-0005432,UniProtKB/Swiss-Prot:P23256,Genbank:NP_416139.1,EcoGene:EG10564,GeneID:945937;Name=NP_416139.1;Note=cystathionine beta-lyase%3B maltose regulon modulator;gbkey=CDS;gene=malY;product=PLP-dependent beta-cystathionase and maltose regulon regulator;protein_id=NP_416139.1;transl_table=11 NC_000913.3 RefSeq gene 1702233 1703234 . + . ID=gene1662;Dbxref=EcoGene:EG10030,GeneID:945851;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;gene_synonym=ECK1618,JW1615;locus_tag=b1623 NC_000913.3 RefSeq CDS 1702233 1703234 . + 0 ID=cds1611;Parent=gene1662;Dbxref=ASAP:ABE-0005435,UniProtKB/Swiss-Prot:P22333,Genbank:NP_416140.1,EcoGene:EG10030,GeneID:945851;Name=NP_416140.1;gbkey=CDS;gene=add;product=adenosine deaminase;protein_id=NP_416140.1;transl_table=11 NC_000913.3 RefSeq gene 1703268 1704308 . - . ID=gene1663;Dbxref=EcoGene:EG13931,GeneID:947164;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;gene_synonym=ECK1619,JW5265;locus_tag=b1624 NC_000913.3 RefSeq CDS 1703268 1704308 . - 0 ID=cds1612;Parent=gene1663;Dbxref=ASAP:ABE-0005437,UniProtKB/Swiss-Prot:P77376,Genbank:NP_416141.4,EcoGene:EG13931,GeneID:947164;Name=NP_416141.4;gbkey=CDS;gene=ydgJ;product=putative oxidoreductase;protein_id=NP_416141.4;transl_table=11 NC_000913.3 RefSeq gene 1704551 1704676 . + . ID=gene1664;Dbxref=EcoGene:EG14389,GeneID:2847682;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;gene_synonym=ECK1620,JW5963;locus_tag=b4409 NC_000913.3 RefSeq CDS 1704551 1704676 . + 0 ID=cds1613;Parent=gene1664;Dbxref=ASAP:ABE-0047212,UniProtKB/Swiss-Prot:P56976,Genbank:YP_025303.1,EcoGene:EG14389,GeneID:2847682;Name=YP_025303.1;Note=beta-lactam resistance protein;gbkey=CDS;gene=blr;product=beta-lactam resistance membrane protein%3B divisome-associated protein;protein_id=YP_025303.1;transl_table=11 NC_000913.3 RefSeq gene 1704949 1705164 . + . ID=gene1665;Dbxref=EcoGene:EG14303,GeneID:946152;Name=cnu;gbkey=Gene;gene=cnu;gene_biotype=protein_coding;gene_synonym=ECK1621,JW1617,ydgT;locus_tag=b1625 NC_000913.3 RefSeq CDS 1704949 1705164 . + 0 ID=cds1614;Parent=gene1665;Dbxref=ASAP:ABE-0005443,UniProtKB/Swiss-Prot:P64467,Genbank:NP_416142.1,EcoGene:EG14303,GeneID:946152;Name=NP_416142.1;gbkey=CDS;gene=cnu;product=nucleoid-associated oriC-binding protein%3B H-NS and StpA stabilizing factor;protein_id=NP_416142.1;transl_table=11 NC_000913.3 RefSeq gene 1705250 1705690 . + . ID=gene1666;Dbxref=EcoGene:EG13932,GeneID:946154;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;gene_synonym=ECK1622,JW1618,rsxP;locus_tag=b1626 NC_000913.3 RefSeq CDS 1705250 1705690 . + 0 ID=cds1615;Parent=gene1666;Dbxref=ASAP:ABE-0005447,UniProtKB/Swiss-Prot:P76180,Genbank:NP_416143.2,EcoGene:EG13932,GeneID:946154;Name=NP_416143.2;gbkey=CDS;gene=ydgK;product=DUF2569 family inner membrane protein;protein_id=NP_416143.2;transl_table=11 NC_000913.3 RefSeq gene 1705767 1706348 . + . ID=gene1667;Dbxref=EcoGene:EG13933,GeneID:946148;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;gene_synonym=ECK1623,JW1619,rnfA,ydgL;locus_tag=b1627 NC_000913.3 RefSeq CDS 1705767 1706348 . + 0 ID=cds1616;Parent=gene1667;Dbxref=ASAP:ABE-0005450,UniProtKB/Swiss-Prot:P0A766,Genbank:NP_416144.1,EcoGene:EG13933,GeneID:946148;Name=NP_416144.1;gbkey=CDS;gene=rsxA;product=SoxR iron-sulfur cluster reduction factor component%3B inner membrane protein of electron transport complex;protein_id=NP_416144.1;transl_table=11 NC_000913.3 RefSeq gene 1706348 1706926 . + . ID=gene1668;Dbxref=EcoGene:EG13934,GeneID:946146;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;gene_synonym=ECK1624,JW1620,rnfB,ydgM;locus_tag=b1628 NC_000913.3 RefSeq CDS 1706348 1706926 . + 0 ID=cds1617;Parent=gene1668;Dbxref=ASAP:ABE-0005452,UniProtKB/Swiss-Prot:P77223,Genbank:NP_416145.1,EcoGene:EG13934,GeneID:946146;Name=NP_416145.1;gbkey=CDS;gene=rsxB;product=SoxR iron-sulfur cluster reduction factor component%3B putative iron-sulfur protein;protein_id=NP_416145.1;transl_table=11 NC_000913.3 RefSeq gene 1706919 1709141 . + . ID=gene1669;Dbxref=EcoGene:EG13935,GeneID:946137;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;gene_synonym=ECK1625,JW1621,rnfC,ydgN;locus_tag=b1629 NC_000913.3 RefSeq CDS 1706919 1709141 . + 0 ID=cds1618;Parent=gene1669;Dbxref=ASAP:ABE-0005454,UniProtKB/Swiss-Prot:P77611,Genbank:NP_416146.1,EcoGene:EG13935,GeneID:946137;Name=NP_416146.1;gbkey=CDS;gene=rsxC;product=SoxR iron-sulfur cluster reduction factor component%3B putative membrane-associated NADH oxidoreductase of electron transport complex;protein_id=NP_416146.1;transl_table=11 NC_000913.3 RefSeq gene 1709142 1710200 . + . ID=gene1670;Dbxref=EcoGene:EG13936,GeneID:946134;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;gene_synonym=ECK1626,JW1622,rnfD,ydgO;locus_tag=b1630 NC_000913.3 RefSeq CDS 1709142 1710200 . + 0 ID=cds1619;Parent=gene1670;Dbxref=ASAP:ABE-0005457,UniProtKB/Swiss-Prot:P76182,Genbank:NP_416147.1,EcoGene:EG13936,GeneID:946134;Name=NP_416147.1;Note=electron transport complex protein;gbkey=CDS;gene=rsxD;product=SoxR iron-sulfur cluster reduction factor component%3B putative membrane protein of electron transport complex;protein_id=NP_416147.1;transl_table=11 NC_000913.3 RefSeq gene 1710204 1710824 . + . ID=gene1671;Dbxref=EcoGene:EG13937,GeneID:946158;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;gene_synonym=ECK1627,JW1623,rnfG,ydgP;locus_tag=b1631 NC_000913.3 RefSeq CDS 1710204 1710824 . + 0 ID=cds1620;Parent=gene1671;Dbxref=ASAP:ABE-0005459,UniProtKB/Swiss-Prot:P77285,Genbank:NP_416148.1,EcoGene:EG13937,GeneID:946158;Name=NP_416148.1;gbkey=CDS;gene=rsxG;product=SoxR iron-sulfur cluster reduction factor component%3B putative membrane protein of electron transport complex;protein_id=NP_416148.1;transl_table=11 NC_000913.3 RefSeq gene 1710828 1711523 . + . ID=gene1672;Dbxref=EcoGene:EG13938,GeneID:947509;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;gene_synonym=ECK1628,JW1624,rnfE,ydgQ;locus_tag=b1632 NC_000913.3 RefSeq CDS 1710828 1711523 . + 0 ID=cds1621;Parent=gene1672;Dbxref=ASAP:ABE-0005461,UniProtKB/Swiss-Prot:P77179,Genbank:NP_416149.1,EcoGene:EG13938,GeneID:947509;Name=NP_416149.1;Note=electron transport complex protein;gbkey=CDS;gene=rsxE;product=SoxR iron-sulfur cluster reduction factor component%3B electron transport inner membrane NADH-quinone reductase;protein_id=NP_416149.1;transl_table=11 NC_000913.3 RefSeq gene 1711523 1712158 . + . ID=gene1673;Dbxref=EcoGene:EG10662,GeneID:947122;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;gene_synonym=ECK1629,JW1625;locus_tag=b1633 NC_000913.3 RefSeq CDS 1711523 1712158 . + 0 ID=cds1622;Parent=gene1673;Dbxref=ASAP:ABE-0005463,UniProtKB/Swiss-Prot:P0AB83,Genbank:NP_416150.1,EcoGene:EG10662,GeneID:947122;Name=NP_416150.1;Note=endonuclease III%3B specific for apurinic and/or apyrimidinic sites;gbkey=CDS;gene=nth;product=DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III);protein_id=NP_416150.1;transl_table=11 NC_000913.3 RefSeq gene 1712769 1714271 . + . ID=gene1674;Dbxref=EcoGene:EG13939,GeneID:947436;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;gene_synonym=ECK1630,JW1626,tppB,ydgR;locus_tag=b1634 NC_000913.3 RefSeq CDS 1712769 1714271 . + 0 ID=cds1623;Parent=gene1674;Dbxref=ASAP:ABE-0005469,UniProtKB/Swiss-Prot:P77304,Genbank:NP_416151.1,EcoGene:EG13939,GeneID:947436;Name=NP_416151.1;Note=putative transport protein;gbkey=CDS;gene=dtpA;product=dipeptide and tripeptide permease A;protein_id=NP_416151.1;transl_table=11 NC_000913.3 RefSeq gene 1714377 1714982 . + . ID=gene1675;Dbxref=EcoGene:EG12613,GeneID:945758;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;gene_synonym=ECK1631,gst,JW1627;locus_tag=b1635 NC_000913.3 RefSeq CDS 1714377 1714982 . + 0 ID=cds1624;Parent=gene1675;Dbxref=ASAP:ABE-0005473,UniProtKB/Swiss-Prot:P0A9D2,Genbank:NP_416152.1,EcoGene:EG12613,GeneID:945758;Name=NP_416152.1;gbkey=CDS;gene=gstA;product=glutathionine S-transferase;protein_id=NP_416152.1;transl_table=11 NC_000913.3 RefSeq gene 1715026 1715889 . - . ID=gene1676;Dbxref=EcoGene:EG13940,GeneID:946162;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;gene_synonym=ECK1632,JW1628,ydgS;locus_tag=b1636 NC_000913.3 RefSeq CDS 1715026 1715889 . - 0 ID=cds1625;Parent=gene1676;Dbxref=ASAP:ABE-0005475,UniProtKB/Swiss-Prot:P77150,Genbank:NP_416153.1,EcoGene:EG13940,GeneID:946162;Name=NP_416153.1;Note=pyridoxal kinase 2 / pyridoxine kinase;gbkey=CDS;gene=pdxY;product=pyridoxamine kinase;protein_id=NP_416153.1;transl_table=11 NC_000913.3 RefSeq gene 1715948 1717222 . - . ID=gene1677;Dbxref=EcoGene:EG11043,GeneID:948855;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;gene_synonym=ECK1633,JW1629;locus_tag=b1637 NC_000913.3 RefSeq CDS 1715948 1717222 . - 0 ID=cds1626;Parent=gene1677;Dbxref=ASAP:ABE-0005477,UniProtKB/Swiss-Prot:P0AGJ9,Genbank:NP_416154.1,EcoGene:EG11043,GeneID:948855;Name=NP_416154.1;Note=tyrosine tRNA synthetase;gbkey=CDS;gene=tyrS;product=tyrosyl-tRNA synthetase;protein_id=NP_416154.1;transl_table=11 NC_000913.3 RefSeq gene 1717351 1718007 . - . ID=gene1678;Dbxref=EcoGene:EG11487,GeneID:946806;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;gene_synonym=ECK1634,JW1630;locus_tag=b1638 NC_000913.3 RefSeq CDS 1717351 1718007 . - 0 ID=cds1627;Parent=gene1678;Dbxref=ASAP:ABE-0005482,UniProtKB/Swiss-Prot:P0AFI7,Genbank:NP_416155.1,EcoGene:EG11487,GeneID:946806;Name=NP_416155.1;Note=pyridoxinephosphate oxidase;gbkey=CDS;gene=pdxH;product=pyridoxine 5'-phosphate oxidase;protein_id=NP_416155.1;transl_table=11 NC_000913.3 RefSeq gene 1718066 1718395 . - . ID=gene1679;Dbxref=EcoGene:EG11488,GeneID:946811;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;gene_synonym=ECK1635,JW1631,ydhA;locus_tag=b1639 NC_000913.3 RefSeq CDS 1718066 1718395 . - 0 ID=cds1628;Parent=gene1679;Dbxref=ASAP:ABE-0005485,UniProtKB/Swiss-Prot:P28224,Genbank:NP_416156.4,EcoGene:EG11488,GeneID:946811;Name=NP_416156.4;gbkey=CDS;gene=mliC;product=inhibitor of c-type lysozyme%2C membrane-bound%3B putative lipoprotein;protein_id=NP_416156.4;transl_table=11 NC_000913.3 RefSeq gene 1718493 1719602 . - . ID=gene1680;Dbxref=EcoGene:EG13942,GeneID:946810;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ECK1636,JW1632,ydhH;locus_tag=b1640 NC_000913.3 RefSeq CDS 1718493 1719602 . - 0 ID=cds1629;Parent=gene1680;Dbxref=ASAP:ABE-0005488,UniProtKB/Swiss-Prot:P77570,Genbank:NP_416157.1,EcoGene:EG13942,GeneID:946810;Name=NP_416157.1;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=NP_416157.1;transl_table=11 NC_000913.3 RefSeq gene 1719876 1720343 . + . ID=gene1681;Dbxref=EcoGene:EG13409,GeneID:946801;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;gene_synonym=ECK1637,JW1633;locus_tag=b1641 NC_000913.3 RefSeq CDS 1719876 1720343 . + 0 ID=cds1630;Parent=gene1681;Dbxref=ASAP:ABE-0005493,UniProtKB/Swiss-Prot:P0A905,Genbank:YP_025304.1,EcoGene:EG13409,GeneID:946801;Name=YP_025304.1;Note=putative outer membrane protein;gbkey=CDS;gene=slyB;product=outer membrane lipoprotein;protein_id=YP_025304.1;transl_table=11 NC_000913.3 RefSeq gene 1720390 1720824 . - . ID=gene1682;Dbxref=EcoGene:EG13408,GeneID:946167;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;gene_synonym=ECK1638,JW5267;locus_tag=b1642 NC_000913.3 RefSeq CDS 1720390 1720824 . - 0 ID=cds1631;Parent=gene1682;Dbxref=ASAP:ABE-0005495,UniProtKB/Swiss-Prot:P0A8W2,Genbank:NP_416159.2,EcoGene:EG13408,GeneID:946167;Name=NP_416159.2;Note=transcriptional regulator for cryptic hemolysin;gbkey=CDS;gene=slyA;product=global transcriptional regulator;protein_id=NP_416159.2;transl_table=11 NC_000913.3 RefSeq gene 1721025 1721261 . + . ID=gene1683;Dbxref=EcoGene:EG13943,GeneID:947559;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;gene_synonym=ECK1639,JW1635;locus_tag=b1643 NC_000913.3 RefSeq CDS 1721025 1721261 . + 0 ID=cds1632;Parent=gene1683;Dbxref=ASAP:ABE-0005499,UniProtKB/Swiss-Prot:P64471,Genbank:NP_416160.1,EcoGene:EG13943,GeneID:947559;Name=NP_416160.1;gbkey=CDS;gene=ydhI;product=DUF1656 family putative inner membrane efflux pump associated protein;protein_id=NP_416160.1;transl_table=11 NC_000913.3 RefSeq gene 1721264 1722121 . + . ID=gene1684;Dbxref=EcoGene:EG13944,GeneID:946499;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;gene_synonym=ECK1640,JW1636;locus_tag=b1644 NC_000913.3 RefSeq CDS 1721264 1722121 . + 0 ID=cds1633;Parent=gene1684;Dbxref=ASAP:ABE-0005501,UniProtKB/Swiss-Prot:P76185,Genbank:NP_416161.4,EcoGene:EG13944,GeneID:946499;Name=NP_416161.4;Note=putative membrane protein;gbkey=CDS;gene=ydhJ;product=putative membrane fusion protein (MFP) of YdhJK efflux pump;protein_id=NP_416161.4;transl_table=11 NC_000913.3 RefSeq gene 1722121 1724133 . + . ID=gene1685;Dbxref=EcoGene:EG13945,GeneID:946528;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;gene_synonym=ECK1641,JW1637;locus_tag=b1645 NC_000913.3 RefSeq CDS 1722121 1724133 . + 0 ID=cds1634;Parent=gene1685;Dbxref=ASAP:ABE-0005503,UniProtKB/Swiss-Prot:P76186,Genbank:NP_416162.1,EcoGene:EG13945,GeneID:946528;Name=NP_416162.1;gbkey=CDS;gene=ydhK;product=putative efflux protein (PET) component of YdhJK efflux pump;protein_id=NP_416162.1;transl_table=11 NC_000913.3 RefSeq gene 1724134 1724655 . - . ID=gene1686;Dbxref=EcoGene:EG13419,GeneID:945343;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;gene_synonym=ECK1642,JW1638;locus_tag=b1646 NC_000913.3 RefSeq CDS 1724134 1724655 . - 0 ID=cds1635;Parent=gene1686;Dbxref=ASAP:ABE-0005505,UniProtKB/Swiss-Prot:P0AGD1,Genbank:NP_416163.1,EcoGene:EG13419,GeneID:945343;Name=NP_416163.1;Note=superoxide dismutase precursor (Cu-Zn);gbkey=CDS;gene=sodC;product=superoxide dismutase%2C Cu%2C Zn%2C periplasmic;protein_id=NP_416163.1;transl_table=11 NC_000913.3 RefSeq gene 1724736 1725632 . - . ID=gene1687;Dbxref=EcoGene:EG13420,GeneID:946960;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;gene_synonym=ECK1643,JW1639;locus_tag=b1647 NC_000913.3 RefSeq CDS 1724736 1725632 . - 0 ID=cds1636;Parent=gene1687;Dbxref=ASAP:ABE-0005508,UniProtKB/Swiss-Prot:P76187,Genbank:YP_025305.1,EcoGene:EG13420,GeneID:946960;Name=YP_025305.1;gbkey=CDS;gene=ydhF;product=putative oxidoreductase;protein_id=YP_025305.1;transl_table=11 NC_000913.3 RefSeq gene 1725681 1725920 . - . ID=gene1688;Dbxref=EcoGene:EG13946,GeneID:946168;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;gene_synonym=ECK1644,JW5827;locus_tag=b1648 NC_000913.3 RefSeq CDS 1725681 1725920 . - 0 ID=cds1637;Parent=gene1688;Dbxref=ASAP:ABE-0005510,UniProtKB/Swiss-Prot:P64474,Genbank:NP_416165.2,EcoGene:EG13946,GeneID:946168;Name=NP_416165.2;gbkey=CDS;gene=ydhL;product=DUF1289 family protein;protein_id=NP_416165.2;transl_table=11 NC_000913.3 RefSeq gene 1726023 1726622 . + . ID=gene1689;Dbxref=EcoGene:EG13947,GeneID:946166;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;gene_synonym=ECK1645,JW5874,ydhM;locus_tag=b1649 NC_000913.3 RefSeq CDS 1726023 1726622 . + 0 ID=cds1638;Parent=gene1689;Dbxref=ASAP:ABE-0005514,UniProtKB/Swiss-Prot:P67430,Genbank:NP_416166.3,EcoGene:EG13947,GeneID:946166;Name=NP_416166.3;gbkey=CDS;gene=nemR;product=transcriptional repressor for the nemRA-gloA operon%2C quinone-%2C glyoxal-%2C and HOCl-activated;protein_id=NP_416166.3;transl_table=11 NC_000913.3 RefSeq gene 1726659 1727756 . + . ID=gene1690;Dbxref=EcoGene:EG13546,GeneID:946164;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;gene_synonym=ECK1646,JW1642,ydhN;locus_tag=b1650 NC_000913.3 RefSeq CDS 1726659 1727756 . + 0 ID=cds1639;Parent=gene1690;Dbxref=ASAP:ABE-0005516,UniProtKB/Swiss-Prot:P77258,Genbank:NP_416167.1,EcoGene:EG13546,GeneID:946164;Name=NP_416167.1;Note=N-ethylmaleimide reductase;gbkey=CDS;gene=nemA;product=chromate reductase%2C quinone reductase%2C FMN-linked%3B N-Ethylmaleimide reductase%3B old yellow enzyme;protein_id=NP_416167.1;transl_table=11 NC_000913.3 RefSeq gene 1727837 1728244 . + . ID=gene1691;Dbxref=EcoGene:EG13421,GeneID:946161;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;gene_synonym=ECK1647,JW1643;locus_tag=b1651 NC_000913.3 RefSeq CDS 1727837 1728244 . + 0 ID=cds1640;Parent=gene1691;Dbxref=ASAP:ABE-0005520,UniProtKB/Swiss-Prot:P0AC81,Genbank:NP_416168.1,EcoGene:EG13421,GeneID:946161;Name=NP_416168.1;Note=lactoylglutathione lyase;gbkey=CDS;gene=gloA;product=glyoxalase I%2C Ni-dependent;protein_id=NP_416168.1;transl_table=11 NC_000913.3 RefSeq gene 1728347 1728994 . + . ID=gene1692;Dbxref=EcoGene:EG11547,GeneID:946159;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;gene_synonym=ECK1648,JW1644;locus_tag=b1652 NC_000913.3 RefSeq CDS 1728347 1728994 . + 0 ID=cds1641;Parent=gene1692;Dbxref=ASAP:ABE-0005523,UniProtKB/Swiss-Prot:P30014,Genbank:NP_416169.1,EcoGene:EG11547,GeneID:946159;Name=NP_416169.1;Note=RNase T%2C degrades tRNA;gbkey=CDS;gene=rnt;product=RNase T%3B exoribonuclease T%3B structured DNA 3' exonuclease%3B RNA processing%3B DNA repair;protein_id=NP_416169.1;transl_table=11 NC_000913.3 RefSeq gene 1729087 1733703 . + . ID=gene1693;Dbxref=EcoGene:EG11548,GeneID:946156;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;gene_synonym=ECK1649,JW1645,rhlF;locus_tag=b1653 NC_000913.3 RefSeq CDS 1729087 1733703 . + 0 ID=cds1642;Parent=gene1693;Dbxref=ASAP:ABE-0005525,UniProtKB/Swiss-Prot:P30015,Genbank:NP_416170.1,EcoGene:EG11548,GeneID:946156;Name=NP_416170.1;Note=member of ATP-dependent helicase superfamily II;gbkey=CDS;gene=lhr;product=putative ATP-dependent helicase;protein_id=NP_416170.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1733714 1733737 . + . ID=id210;Note=REP127 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1733754 1734101 . - . ID=gene1694;Dbxref=EcoGene:EG12181,GeneID:946169;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;gene_synonym=ECK1650,JW1646,ydhD;locus_tag=b1654 NC_000913.3 RefSeq CDS 1733754 1734101 . - 0 ID=cds1643;Parent=gene1694;Dbxref=ASAP:ABE-0005527,UniProtKB/Swiss-Prot:P0AC69,Genbank:NP_416171.1,EcoGene:EG12181,GeneID:946169;Name=NP_416171.1;gbkey=CDS;gene=grxD;product=glutaredoxin-4;protein_id=NP_416171.1;transl_table=11 NC_000913.3 RefSeq gene 1734435 1735250 . + . ID=gene1695;Dbxref=EcoGene:EG13949,GeneID:945210;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;gene_synonym=ECK1651,JW5270,ydhO;locus_tag=b1655 NC_000913.3 RefSeq CDS 1734435 1735250 . + 0 ID=cds1644;Parent=gene1695;Dbxref=ASAP:ABE-0005533,UniProtKB/Swiss-Prot:P76190,Genbank:NP_416172.1,EcoGene:EG13949,GeneID:945210;Name=NP_416172.1;Note=putative lipoprotein;gbkey=CDS;gene=mepH;product=murein DD-endopeptidase%2C space-maker hydrolase;protein_id=NP_416172.1;transl_table=11 NC_000913.3 RefSeq gene 1735378 1735959 . + . ID=gene1696;Dbxref=EcoGene:EG10954,GeneID:944953;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;gene_synonym=ECK1652,JW1648;locus_tag=b1656 NC_000913.3 RefSeq CDS 1735378 1735959 . + 0 ID=cds1645;Parent=gene1696;Dbxref=ASAP:ABE-0005537,UniProtKB/Swiss-Prot:P0AGD3,Genbank:NP_416173.1,EcoGene:EG10954,GeneID:944953;Name=NP_416173.1;Note=superoxide dismutase%2C iron;gbkey=CDS;gene=sodB;product=superoxide dismutase%2C Fe;protein_id=NP_416173.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1735983 1736056 . + . ID=id211;Note=REP128 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1736121 1737290 . - . ID=gene1697;Dbxref=EcoGene:EG13950,GeneID:947340;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;gene_synonym=ECK1653,JW1649;locus_tag=b1657 NC_000913.3 RefSeq CDS 1736121 1737290 . - 0 ID=cds1646;Parent=gene1697;Dbxref=ASAP:ABE-0005540,UniProtKB/Swiss-Prot:P77389,Genbank:NP_416174.1,EcoGene:EG13950,GeneID:947340;Name=NP_416174.1;Note=putative transport protein;gbkey=CDS;gene=ydhP;product=putative MFS transporter%2C inner membrane protein;protein_id=NP_416174.1;transl_table=11 NC_000913.3 RefSeq gene 1737456 1737545 . - . ID=gene1698;Dbxref=EcoGene:EG14016,GeneID:5061505;Name=ynhF;gbkey=Gene;gene=ynhF;gene_biotype=protein_coding;gene_synonym=ECK4411;locus_tag=b4602 NC_000913.3 RefSeq CDS 1737456 1737545 . - 0 ID=cds1647;Parent=gene1698;Dbxref=UniProtKB/Swiss-Prot:A5A618,Genbank:YP_001165321.1,EcoGene:EG14016,GeneID:5061505;Name=YP_001165321.1;gbkey=CDS;gene=ynhF;product=stress response membrane;protein_id=YP_001165321.1;transl_table=11 NC_000913.3 RefSeq gene 1737844 1738869 . + . ID=gene1699;Dbxref=EcoGene:EG10800,GeneID:945226;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;gene_synonym=ECK1654,JW1650;locus_tag=b1658 NC_000913.3 RefSeq CDS 1737844 1738869 . + 0 ID=cds1648;Parent=gene1699;Dbxref=ASAP:ABE-0005545,UniProtKB/Swiss-Prot:P0ACP7,Genbank:NP_416175.1,EcoGene:EG10800,GeneID:945226;Name=NP_416175.1;Note=transcriptional repressor for pur regulon%2C glyA%2C glnB%2C prsA%2C speA;gbkey=CDS;gene=purR;product=transcriptional repressor%2C hypoxanthine-binding;protein_id=NP_416175.1;transl_table=11 NC_000913.3 RefSeq gene 1738866 1739798 . - . ID=gene1700;Dbxref=EcoGene:EG12140,GeneID:945208;Name=ydhB;gbkey=Gene;gene=ydhB;gene_biotype=protein_coding;gene_synonym=ECK1655,JW1651;locus_tag=b1659 NC_000913.3 RefSeq CDS 1738866 1739798 . - 0 ID=cds1649;Parent=gene1700;Dbxref=ASAP:ABE-0005547,UniProtKB/Swiss-Prot:P0ACR2,Genbank:NP_416176.1,EcoGene:EG12140,GeneID:945208;Name=NP_416176.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ydhB;product=LysR family putative transcriptional regulator;protein_id=NP_416176.1;transl_table=11 NC_000913.3 RefSeq gene 1739911 1741122 . + . ID=gene1701;Dbxref=EcoGene:EG12141,GeneID:946077;Name=ydhC;gbkey=Gene;gene=ydhC;gene_biotype=protein_coding;gene_synonym=ECK1656,JW1652;locus_tag=b1660 NC_000913.3 RefSeq CDS 1739911 1741122 . + 0 ID=cds1650;Parent=gene1701;Dbxref=ASAP:ABE-0005551,UniProtKB/Swiss-Prot:P37597,Genbank:YP_025306.1,EcoGene:EG12141,GeneID:946077;Name=YP_025306.1;Note=putative transport protein;gbkey=CDS;gene=ydhC;product=putative arabinose efflux transporter;protein_id=YP_025306.1;transl_table=11 NC_000913.3 RefSeq gene 1741413 1742561 . + . ID=gene1702;Dbxref=EcoGene:EG11531,GeneID:944811;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;gene_synonym=cdfA,ECK1657,JW1653;locus_tag=b1661 NC_000913.3 RefSeq CDS 1741413 1742561 . + 0 ID=cds1651;Parent=gene1702;Dbxref=ASAP:ABE-0005555,UniProtKB/Swiss-Prot:P0A9H7,Genbank:NP_416178.1,EcoGene:EG11531,GeneID:944811;Name=NP_416178.1;Note=cyclopropane fatty acyl phospholipid synthase;gbkey=CDS;gene=cfa;product=cyclopropane fatty acyl phospholipid synthase%2C SAM-dependent;protein_id=NP_416178.1;transl_table=11 NC_000913.3 RefSeq gene 1742601 1743242 . - . ID=gene1703;Dbxref=EcoGene:EG11406,GeneID:945848;Name=ribC;gbkey=Gene;gene=ribC;gene_biotype=protein_coding;gene_synonym=ECK1658,JW1654,ribE;locus_tag=b1662 NC_000913.3 RefSeq CDS 1742601 1743242 . - 0 ID=cds1652;Parent=gene1703;Dbxref=ASAP:ABE-0005557,UniProtKB/Swiss-Prot:P0AFU8,Genbank:NP_416179.1,EcoGene:EG11406,GeneID:945848;Name=NP_416179.1;Note=riboflavin synthase%2C alpha chain;gbkey=CDS;gene=ribC;product=riboflavin synthase%2C alpha subunit;protein_id=NP_416179.1;transl_table=11 NC_000913.3 RefSeq gene 1743457 1744830 . + . ID=gene1704;Dbxref=EcoGene:EG12400,GeneID:945883;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;gene_synonym=ECK1659,JW1655,norE,norM,ydhE;locus_tag=b1663 NC_000913.3 RefSeq CDS 1743457 1744830 . + 0 ID=cds1653;Parent=gene1704;Dbxref=ASAP:ABE-0005561,UniProtKB/Swiss-Prot:P37340,Genbank:YP_025307.1,EcoGene:EG12400,GeneID:945883;Name=YP_025307.1;Note=multidrug resistance protein norM (Na(+)/drug antiporter) (Multidrug-efflux transporter);gbkey=CDS;gene=mdtK;product=multidrug efflux system transporter;protein_id=YP_025307.1;transl_table=11 NC_000913.3 RefSeq gene 1744871 1746127 . - . ID=gene1705;Dbxref=EcoGene:EG13951,GeneID:944851;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;gene_synonym=ECK1660,JW1656;locus_tag=b1664 NC_000913.3 RefSeq CDS 1744871 1746127 . - 0 ID=cds1654;Parent=gene1705;Dbxref=ASAP:ABE-0005563,UniProtKB/Swiss-Prot:P77552,Genbank:NP_416181.1,EcoGene:EG13951,GeneID:944851;Name=NP_416181.1;Note=possible enzyme;gbkey=CDS;gene=ydhQ;product=autotransporter adhesin-related protein;protein_id=NP_416181.1;transl_table=11 NC_000913.3 RefSeq gene 1746435 1746511 . + . ID=gene1706;Dbxref=EcoGene:EG30111,GeneID:946170;Name=valV;gbkey=Gene;gene=valV;gene_biotype=tRNA;gene_synonym=ECK1661,JWR0031;locus_tag=b1665 NC_000913.3 RefSeq tRNA 1746435 1746511 . + . ID=rna50;Parent=gene1706;Dbxref=ASAP:ABE-0005567,EcoGene:EG30111,GeneID:946170;Note=anticodon: GAC;gbkey=tRNA;gene=valV;product=tRNA-Val NC_000913.3 RefSeq exon 1746435 1746511 . + . ID=id212;Parent=rna50;Dbxref=ASAP:ABE-0005567,EcoGene:EG30111,GeneID:946170;Note=anticodon: GAC;gbkey=tRNA;gene=valV;product=tRNA-Val NC_000913.3 RefSeq gene 1746516 1746592 . + . ID=gene1707;Dbxref=EcoGene:EG30112,GeneID:949069;Name=valW;gbkey=Gene;gene=valW;gene_biotype=tRNA;gene_synonym=ECK1662,JWR0032;locus_tag=b1666 NC_000913.3 RefSeq tRNA 1746516 1746592 . + . ID=rna51;Parent=gene1707;Dbxref=ASAP:ABE-0005569,EcoGene:EG30112,GeneID:949069;Note=anticodon: GAC;gbkey=tRNA;gene=valW;product=tRNA-Val NC_000913.3 RefSeq exon 1746516 1746592 . + . ID=id213;Parent=rna51;Dbxref=ASAP:ABE-0005569,EcoGene:EG30112,GeneID:949069;Note=anticodon: GAC;gbkey=tRNA;gene=valW;product=tRNA-Val NC_000913.3 RefSeq gene 1746700 1747005 . + . ID=gene1708;Dbxref=EcoGene:EG13952,GeneID:946177;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;gene_synonym=ECK1663,JW1657;locus_tag=b1667 NC_000913.3 RefSeq CDS 1746700 1747005 . + 0 ID=cds1655;Parent=gene1708;Dbxref=ASAP:ABE-0005572,UniProtKB/Swiss-Prot:P0ACX3,Genbank:NP_416182.1,EcoGene:EG13952,GeneID:946177;Name=NP_416182.1;gbkey=CDS;gene=ydhR;product=putative monooxygenase;protein_id=NP_416182.1;transl_table=11 NC_000913.3 RefSeq gene 1747131 1748735 . + . ID=gene1709;Dbxref=EcoGene:EG13953,GeneID:945786;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;gene_synonym=ECK1664,JW1658;locus_tag=b1668 NC_000913.3 RefSeq CDS 1747131 1748735 . + 0 ID=cds1656;Parent=gene1709;Dbxref=ASAP:ABE-0005575,UniProtKB/Swiss-Prot:P77148,Genbank:NP_416183.1,EcoGene:EG13953,GeneID:945786;Name=NP_416183.1;gbkey=CDS;gene=ydhS;product=putative oxidoreductase;protein_id=NP_416183.1;transl_table=11 NC_000913.3 RefSeq gene 1748747 1749559 . - . ID=gene1710;Dbxref=EcoGene:EG13954,GeneID:945960;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;gene_synonym=ECK1665,JW1659;locus_tag=b1669 NC_000913.3 RefSeq CDS 1748747 1749559 . - 0 ID=cds1657;Parent=gene1710;Dbxref=ASAP:ABE-0005577,UniProtKB/Swiss-Prot:P77147,Genbank:NP_416184.1,EcoGene:EG13954,GeneID:945960;Name=NP_416184.1;gbkey=CDS;gene=ydhT;product=FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=NP_416184.1;transl_table=11 NC_000913.3 RefSeq gene 1749563 1750348 . - . ID=gene1711;Dbxref=EcoGene:EG13955,GeneID:945608;Name=ydhU;gbkey=Gene;gene=ydhU;gene_biotype=protein_coding;gene_synonym=ECK1666,JW1660;locus_tag=b1670 NC_000913.3 RefSeq CDS 1749563 1750348 . - 0 ID=cds1658;Parent=gene1711;Dbxref=ASAP:ABE-0005579,UniProtKB/Swiss-Prot:P77409,Genbank:NP_416185.1,EcoGene:EG13955,GeneID:945608;Name=NP_416185.1;gbkey=CDS;gene=ydhU;product=putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex;protein_id=NP_416185.1;transl_table=11 NC_000913.3 RefSeq gene 1750345 1751013 . - . ID=gene1712;Dbxref=EcoGene:EG13958,GeneID:947308;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;gene_synonym=ECK1667,JW5271;locus_tag=b1671 NC_000913.3 RefSeq CDS 1750345 1751013 . - 0 ID=cds1659;Parent=gene1712;Dbxref=ASAP:ABE-0005583,UniProtKB/Swiss-Prot:P77375,Genbank:NP_416186.4,EcoGene:EG13958,GeneID:947308;Name=NP_416186.4;Note=putative oxidoreductase%2C Fe-S subunit;gbkey=CDS;gene=ydhX;product=putative 4Fe-4S ferridoxin-type protein%3B FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=NP_416186.4;transl_table=11 NC_000913.3 RefSeq gene 1751077 1751724 . - . ID=gene1713;Dbxref=EcoGene:EG13957,GeneID:947180;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;gene_synonym=ECK1668,JW1662;locus_tag=b1672 NC_000913.3 RefSeq CDS 1751077 1751724 . - 0 ID=cds1660;Parent=gene1713;Dbxref=ASAP:ABE-0005585,UniProtKB/Swiss-Prot:P77564,Genbank:NP_416187.1,EcoGene:EG13957,GeneID:947180;Name=NP_416187.1;gbkey=CDS;gene=ydhW;product=FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=NP_416187.1;transl_table=11 NC_000913.3 RefSeq gene 1751728 1753830 . - . ID=gene1714;Dbxref=EcoGene:EG13956,GeneID:948756;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;gene_synonym=ECK1669,JW5272;locus_tag=b1673 NC_000913.3 RefSeq CDS 1751728 1753830 . - 0 ID=cds1661;Parent=gene1714;Dbxref=ASAP:ABE-0005587,UniProtKB/Swiss-Prot:P76192,Genbank:NP_416188.1,EcoGene:EG13956,GeneID:948756;Name=NP_416188.1;gbkey=CDS;gene=ydhV;product=putative oxidoreductase subunit;protein_id=NP_416188.1;transl_table=11 NC_000913.3 RefSeq gene 1753851 1754477 . - . ID=gene1715;Dbxref=EcoGene:EG13959,GeneID:948749;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;gene_synonym=ECK1670,JW1664;locus_tag=b1674 NC_000913.3 RefSeq CDS 1753851 1754477 . - 0 ID=cds1662;Parent=gene1715;Dbxref=ASAP:ABE-0005589,UniProtKB/Swiss-Prot:P0AAL6,Genbank:NP_416189.1,EcoGene:EG13959,GeneID:948749;Name=NP_416189.1;Note=putative oxidoreductase%2C Fe-S subunit;gbkey=CDS;gene=ydhY;product=putative 4Fe-4S ferridoxin-type protein%3B FNR%2C Nar%2C NarP-regulated protein%3B putative subunit of YdhYVWXUT oxidoreductase complex;protein_id=NP_416189.1;transl_table=11 NC_000913.3 RefSeq gene 1754932 1755141 . - . ID=gene1716;Dbxref=EcoGene:EG13960,GeneID:946180;Name=ydhZ;gbkey=Gene;gene=ydhZ;gene_biotype=protein_coding;gene_synonym=ECK1671,JW1665;locus_tag=b1675 NC_000913.3 RefSeq CDS 1754932 1755141 . - 0 ID=cds1663;Parent=gene1716;Dbxref=ASAP:ABE-0005591,UniProtKB/Swiss-Prot:P0ACX5,Genbank:NP_416190.1,EcoGene:EG13960,GeneID:946180;Name=NP_416190.1;gbkey=CDS;gene=ydhZ;product=uncharacterized protein;protein_id=NP_416190.1;transl_table=11 NC_000913.3 RefSeq gene 1755698 1757110 . + . ID=gene1717;Dbxref=EcoGene:EG10804,GeneID:946179;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;gene_synonym=ECK1672,JW1666;locus_tag=b1676 NC_000913.3 RefSeq CDS 1755698 1757110 . + 0 ID=cds1664;Parent=gene1717;Dbxref=ASAP:ABE-0005600,UniProtKB/Swiss-Prot:P0AD61,Genbank:NP_416191.1,EcoGene:EG10804,GeneID:946179;Name=NP_416191.1;Note=pyruvate kinase I (formerly F)%2C fructose stimulated;gbkey=CDS;gene=pykF;product=pyruvate kinase I;protein_id=NP_416191.1;transl_table=11 NC_000913.3 RefSeq gene 1757421 1757657 . + . ID=gene1718;Dbxref=EcoGene:EG10544,GeneID:946175;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;gene_synonym=ECK1673,JW1667,mlpA,mulI;locus_tag=b1677 NC_000913.3 RefSeq CDS 1757421 1757657 . + 0 ID=cds1665;Parent=gene1718;Dbxref=ASAP:ABE-0005603,UniProtKB/Swiss-Prot:P69776,Genbank:NP_416192.1,EcoGene:EG10544,GeneID:946175;Name=NP_416192.1;gbkey=CDS;gene=lpp;product=murein lipoprotein;protein_id=NP_416192.1;transl_table=11 NC_000913.3 RefSeq gene 1757721 1758725 . - . ID=gene1719;Dbxref=EcoGene:EG14015,GeneID:946174;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;gene_synonym=ECK1674,JW1668,ynhG;locus_tag=b1678 NC_000913.3 RefSeq CDS 1757721 1758725 . - 0 ID=cds1666;Parent=gene1719;Dbxref=ASAP:ABE-0005605,UniProtKB/Swiss-Prot:P76193,Genbank:NP_416193.1,EcoGene:EG14015,GeneID:946174;Name=NP_416193.1;gbkey=CDS;gene=ldtE;product=murein L%2CD-transpeptidase;protein_id=NP_416193.1;transl_table=11 NC_000913.3 RefSeq gene 1758874 1759290 . - . ID=gene1720;Dbxref=EcoGene:EG13961,GeneID:946173;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;gene_synonym=ECK1675,JW1669,ynhA;locus_tag=b1679 NC_000913.3 RefSeq CDS 1758874 1759290 . - 0 ID=cds1667;Parent=gene1720;Dbxref=ASAP:ABE-0005608,UniProtKB/Swiss-Prot:P76194,Genbank:NP_416194.1,EcoGene:EG13961,GeneID:946173;Name=NP_416194.1;gbkey=CDS;gene=sufE;product=sulfur acceptor protein;protein_id=NP_416194.1;transl_table=11 NC_000913.3 RefSeq gene 1759303 1760523 . - . ID=gene1721;Dbxref=EcoGene:EG13962,GeneID:946185;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;gene_synonym=csdB,ECK1676,JW1670,ynhB;locus_tag=b1680 NC_000913.3 RefSeq CDS 1759303 1760523 . - 0 ID=cds1668;Parent=gene1721;Dbxref=ASAP:ABE-0005610,UniProtKB/Swiss-Prot:P77444,Genbank:NP_416195.1,EcoGene:EG13962,GeneID:946185;Name=NP_416195.1;gbkey=CDS;gene=sufS;product=cysteine desulfurase%2C stimulated by SufE%3B selenocysteine lyase%2C PLP-dependent;protein_id=NP_416195.1;transl_table=11 NC_000913.3 RefSeq gene 1760520 1761791 . - . ID=gene1722;Dbxref=EcoGene:EG13963,GeneID:944878;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;gene_synonym=ECK1677,JW1671,ynhC;locus_tag=b1681 NC_000913.3 RefSeq CDS 1760520 1761791 . - 0 ID=cds1669;Parent=gene1722;Dbxref=ASAP:ABE-0005617,UniProtKB/Swiss-Prot:P77689,Genbank:NP_416196.1,EcoGene:EG13963,GeneID:944878;Name=NP_416196.1;gbkey=CDS;gene=sufD;product=component of SufBCD Fe-S cluster assembly scaffold;protein_id=NP_416196.1;transl_table=11 NC_000913.3 RefSeq gene 1761766 1762512 . - . ID=gene1723;Dbxref=EcoGene:EG13964,GeneID:946128;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;gene_synonym=ECK1678,JW1672,ynhD;locus_tag=b1682 NC_000913.3 RefSeq CDS 1761766 1762512 . - 0 ID=cds1670;Parent=gene1723;Dbxref=ASAP:ABE-0005619,UniProtKB/Swiss-Prot:P77499,Genbank:NP_416197.1,EcoGene:EG13964,GeneID:946128;Name=NP_416197.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=sufC;product=SufBCD Fe-S cluster assembly scaffold protein%2C ATP-binding protein;protein_id=NP_416197.1;transl_table=11 NC_000913.3 RefSeq gene 1762522 1764009 . - . ID=gene1724;Dbxref=EcoGene:EG13965,GeneID:945753;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;gene_synonym=ECK1679,JW5273,ynhE;locus_tag=b1683 NC_000913.3 RefSeq CDS 1762522 1764009 . - 0 ID=cds1671;Parent=gene1724;Dbxref=ASAP:ABE-0005621,UniProtKB/Swiss-Prot:P77522,Genbank:NP_416198.2,EcoGene:EG13965,GeneID:945753;Name=NP_416198.2;gbkey=CDS;gene=sufB;product=component of SufBCD Fe-S cluster assembly scaffold;protein_id=NP_416198.2;transl_table=11 NC_000913.3 RefSeq gene 1764018 1764386 . - . ID=gene1725;Dbxref=EcoGene:EG11378,GeneID:949014;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;gene_synonym=ECK1680,JW1674,ydiC;locus_tag=b1684 NC_000913.3 RefSeq CDS 1764018 1764386 . - 0 ID=cds1672;Parent=gene1725;Dbxref=ASAP:ABE-0005624,UniProtKB/Swiss-Prot:P77667,Genbank:NP_416199.1,EcoGene:EG11378,GeneID:949014;Name=NP_416199.1;gbkey=CDS;gene=sufA;product=Fe-S cluster assembly protein;protein_id=NP_416199.1;transl_table=11 NC_000913.3 RefSeq gene 1764713 1764780 . - . ID=gene1726;Dbxref=EcoGene:EG31145,GeneID:2847670;Name=rydB;gbkey=Gene;gene=rydB;gene_biotype=ncRNA;gene_synonym=ECK1681,IS082,JWR0236,tpe7;locus_tag=b4430 NC_000913.3 RefSeq ncRNA 1764713 1764780 . - . ID=rna52;Parent=gene1726;Dbxref=ASAP:ABE-0047250,EcoGene:EG31145,GeneID:2847670;Note=identified in a large scale screen;gbkey=ncRNA;gene=rydB;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 1764713 1764780 . - . ID=id214;Parent=rna52;Dbxref=ASAP:ABE-0047250,EcoGene:EG31145,GeneID:2847670;Note=identified in a large scale screen;gbkey=ncRNA;gene=rydB;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 1764934 1765122 . - . ID=gene1727;Dbxref=EcoGene:EG13967,GeneID:946194;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;gene_synonym=ECK1682,JW1675;locus_tag=b1685 NC_000913.3 RefSeq CDS 1764934 1765122 . - 0 ID=cds1673;Parent=gene1727;Dbxref=ASAP:ABE-0005626,UniProtKB/Swiss-Prot:P64476,Genbank:NP_416200.2,EcoGene:EG13967,GeneID:946194;Name=NP_416200.2;gbkey=CDS;gene=ydiH;product=uncharacterized protein;protein_id=NP_416200.2;transl_table=11 NC_000913.3 RefSeq gene 1765222 1765632 . - . ID=gene1728;Dbxref=EcoGene:EG13968,GeneID:946190;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;gene_synonym=ECK1683,JW1676,ydiI;locus_tag=b1686 NC_000913.3 RefSeq CDS 1765222 1765632 . - 0 ID=cds1674;Parent=gene1728;Dbxref=ASAP:ABE-0005628,UniProtKB/Swiss-Prot:P77781,Genbank:NP_416201.1,EcoGene:EG13968,GeneID:946190;Name=NP_416201.1;gbkey=CDS;gene=menI;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=NP_416201.1;transl_table=11 NC_000913.3 RefSeq gene 1765629 1768685 . - . ID=gene1729;Dbxref=EcoGene:EG13969,GeneID:946189;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;gene_synonym=ECK1684,JW1677;locus_tag=b1687 NC_000913.3 RefSeq CDS 1765629 1768685 . - 0 ID=cds1675;Parent=gene1729;Dbxref=ASAP:ABE-0005632,UniProtKB/Swiss-Prot:P77748,Genbank:NP_416202.1,EcoGene:EG13969,GeneID:946189;Name=NP_416202.1;Note=putative oxidase;gbkey=CDS;gene=ydiJ;product=putative FAD-linked oxidoreductase;protein_id=NP_416202.1;transl_table=11 NC_000913.3 RefSeq gene 1769074 1770186 . + . ID=gene1730;Dbxref=EcoGene:EG13970,GeneID:946183;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;gene_synonym=ECK1685,JW1678;locus_tag=b1688 NC_000913.3 RefSeq CDS 1769074 1770186 . + 0 ID=cds1676;Parent=gene1730;Dbxref=ASAP:ABE-0005637,UniProtKB/Swiss-Prot:P0AFS7,Genbank:NP_416203.1,EcoGene:EG13970,GeneID:946183;Name=NP_416203.1;gbkey=CDS;gene=ydiK;product=UPF0118 family inner membrane protein;protein_id=NP_416203.1;transl_table=11 NC_000913.3 RefSeq gene 1770372 1770477 . + . ID=gene1731;Dbxref=EcoGene:EG31130,GeneID:2847671;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;gene_synonym=ECK1686,IS083,JWR0203,psrA5;locus_tag=b4431 NC_000913.3 RefSeq ncRNA 1770372 1770477 . + . ID=rna53;Parent=gene1731;Dbxref=ASAP:ABE-0047251,EcoGene:EG31130,GeneID:2847671;Note=RprA RNA%3B positive regulatory RNA for rpoS translation;gbkey=ncRNA;gene=rprA;ncrna_class=antisense_RNA;product=sRNA antisense activator for RpoS translation%2C Hfq-dependent NC_000913.3 RefSeq exon 1770372 1770477 . + . ID=id215;Parent=rna53;Dbxref=ASAP:ABE-0047251,EcoGene:EG31130,GeneID:2847671;Note=RprA RNA%3B positive regulatory RNA for rpoS translation;gbkey=ncRNA;gene=rprA;ncrna_class=antisense_RNA;product=sRNA antisense activator for RpoS translation%2C Hfq-dependent NC_000913.3 RefSeq gene 1770615 1770971 . + . ID=gene1732;Dbxref=EcoGene:EG13971,GeneID:946181;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;gene_synonym=ECK1687,JW1679;locus_tag=b1689 NC_000913.3 RefSeq CDS 1770615 1770971 . + 0 ID=cds1677;Parent=gene1732;Dbxref=ASAP:ABE-0005641,UniProtKB/Swiss-Prot:P76196,Genbank:NP_416204.2,EcoGene:EG13971,GeneID:946181;Name=NP_416204.2;gbkey=CDS;gene=ydiL;product=putative HTH domain DNA-binding protein;protein_id=NP_416204.2;transl_table=11 NC_000913.3 RefSeq gene 1771071 1772285 . + . ID=gene1733;Dbxref=EcoGene:EG13972,GeneID:946196;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;gene_synonym=ECK1688,JW1680;locus_tag=b1690 NC_000913.3 RefSeq CDS 1771071 1772285 . + 0 ID=cds1678;Parent=gene1733;Dbxref=ASAP:ABE-0005645,UniProtKB/Swiss-Prot:P76197,Genbank:NP_416205.1,EcoGene:EG13972,GeneID:946196;Name=NP_416205.1;Note=putative transport system permease protein;gbkey=CDS;gene=ydiM;product=putative MFS transporter%2C membrane protein;protein_id=NP_416205.1;transl_table=11 NC_000913.3 RefSeq gene 1772512 1773777 . + . ID=gene1734;Dbxref=EcoGene:EG13973,GeneID:946198;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;gene_synonym=ECK1689,JW5274;locus_tag=b1691 NC_000913.3 RefSeq CDS 1772512 1773777 . + 0 ID=cds1679;Parent=gene1734;Dbxref=ASAP:ABE-0005648,UniProtKB/Swiss-Prot:P76198,Genbank:NP_416206.6,EcoGene:EG13973,GeneID:946198;Name=NP_416206.6;Note=putative amino acid/amine transport protein;gbkey=CDS;gene=ydiN;product=putative MFS transporter%2C membrane protein;protein_id=NP_416206.6;transl_table=11 NC_000913.3 RefSeq gene 1773789 1774655 . + . ID=gene1735;Dbxref=EcoGene:EG11234,GeneID:946200;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;gene_synonym=ECK1690,JW1682;locus_tag=b1692 NC_000913.3 RefSeq CDS 1773789 1774655 . + 0 ID=cds1680;Parent=gene1735;Dbxref=ASAP:ABE-0005651,UniProtKB/Swiss-Prot:P0A6D5,Genbank:NP_416207.1,EcoGene:EG11234,GeneID:946200;Name=NP_416207.1;Note=putative oxidoreductase;gbkey=CDS;gene=ydiB;product=quinate/shikimate 5-dehydrogenase%2C NAD(P)-binding;protein_id=NP_416207.1;transl_table=11 NC_000913.3 RefSeq gene 1774686 1775444 . + . ID=gene1736;Dbxref=EcoGene:EG10076,GeneID:946210;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;gene_synonym=ECK1691,JW1683;locus_tag=b1693 NC_000913.3 RefSeq CDS 1774686 1775444 . + 0 ID=cds1681;Parent=gene1736;Dbxref=ASAP:ABE-0005653,UniProtKB/Swiss-Prot:P05194,Genbank:NP_416208.1,EcoGene:EG10076,GeneID:946210;Name=NP_416208.1;gbkey=CDS;gene=aroD;product=3-dehydroquinate dehydratase;protein_id=NP_416208.1;transl_table=11 NC_000913.3 RefSeq gene 1775587 1777182 . + . ID=gene1737;Dbxref=EcoGene:EG12432,GeneID:946211;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;gene_synonym=ECK1692,JW1684;locus_tag=b1694 NC_000913.3 RefSeq CDS 1775587 1777182 . + 0 ID=cds1682;Parent=gene1737;Dbxref=ASAP:ABE-0005656,UniProtKB/Swiss-Prot:P37766,Genbank:NP_416209.1,EcoGene:EG12432,GeneID:946211;Name=NP_416209.1;Note=putative enzyme;gbkey=CDS;gene=ydiF;product=putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit;protein_id=NP_416209.1;transl_table=11 NC_000913.3 RefSeq gene 1777196 1778347 . + . ID=gene1738;Dbxref=EcoGene:EG13974,GeneID:945626;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;gene_synonym=ECK1693,JW5275;locus_tag=b1695 NC_000913.3 RefSeq CDS 1777196 1778347 . + 0 ID=cds1683;Parent=gene1738;Dbxref=ASAP:ABE-0005658,UniProtKB/Swiss-Prot:P0A9U8,Genbank:NP_416210.4,EcoGene:EG13974,GeneID:945626;Name=NP_416210.4;Note=putative oxidoreductase;gbkey=CDS;gene=ydiO;product=putative acyl-CoA dehydrogenase;protein_id=NP_416210.4;transl_table=11 NC_000913.3 RefSeq gene 1778390 1779301 . - . ID=gene1739;Dbxref=EcoGene:EG13975,GeneID:945095;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=protein_coding;gene_synonym=ECK1694,JW1686;locus_tag=b1696 NC_000913.3 RefSeq CDS 1778390 1779301 . - 0 ID=cds1684;Parent=gene1739;Dbxref=ASAP:ABE-0005660,UniProtKB/Swiss-Prot:P77402,Genbank:NP_416211.1,EcoGene:EG13975,GeneID:945095;Name=NP_416211.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=ydiP;product=putative DNA-binding transcriptional regulator;protein_id=NP_416211.1;transl_table=11 NC_000913.3 RefSeq gene 1779617 1780381 . + . ID=gene1740;Dbxref=EcoGene:EG13976,GeneID:946482;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;gene_synonym=ECK1695,JW5276;locus_tag=b1697 NC_000913.3 RefSeq CDS 1779617 1780381 . + 0 ID=cds1685;Parent=gene1740;Dbxref=ASAP:ABE-0005666,UniProtKB/Swiss-Prot:P76201,Genbank:NP_416212.1,EcoGene:EG13976,GeneID:946482;Name=NP_416212.1;Note=putative transport protein;gbkey=CDS;gene=ydiQ;product=putative electron transfer flavoprotein subunit;protein_id=NP_416212.1;transl_table=11 NC_000913.3 RefSeq gene 1780401 1781339 . + . ID=gene1741;Dbxref=EcoGene:EG13977,GeneID:945688;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;gene_synonym=ECK1696,JW1688;locus_tag=b1698 NC_000913.3 RefSeq CDS 1780401 1781339 . + 0 ID=cds1686;Parent=gene1741;Dbxref=ASAP:ABE-0005668,UniProtKB/Swiss-Prot:P77378,Genbank:NP_416213.1,EcoGene:EG13977,GeneID:945688;Name=NP_416213.1;Note=putative flavoprotein;gbkey=CDS;gene=ydiR;product=putative electron transfer flavoprotein%2C FAD-binding subunit;protein_id=NP_416213.1;transl_table=11 NC_000913.3 RefSeq gene 1781395 1782684 . + . ID=gene1742;Dbxref=EcoGene:EG13978,GeneID:946212;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;gene_synonym=ECK1697,JW1689;locus_tag=b1699 NC_000913.3 RefSeq CDS 1781395 1782684 . + 0 ID=cds1687;Parent=gene1742;Dbxref=ASAP:ABE-0005671,UniProtKB/Swiss-Prot:P77337,Genbank:NP_416214.1,EcoGene:EG13978,GeneID:946212;Name=NP_416214.1;Note=flavoprotein%3B probably electron transport;gbkey=CDS;gene=ydiS;product=putative oxidoreductase;protein_id=NP_416214.1;transl_table=11 NC_000913.3 RefSeq gene 1782681 1782974 . + . ID=gene1743;Dbxref=EcoGene:EG13979,GeneID:946214;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;gene_synonym=ECK1698,JW1690;locus_tag=b1700 NC_000913.3 RefSeq CDS 1782681 1782974 . + 0 ID=cds1688;Parent=gene1743;Dbxref=ASAP:ABE-0005674,UniProtKB/Swiss-Prot:P77714,Genbank:NP_416215.1,EcoGene:EG13979,GeneID:946214;Name=NP_416215.1;gbkey=CDS;gene=ydiT;product=putative 3Fe-4S ferredoxin-type protein;protein_id=NP_416215.1;transl_table=11 NC_000913.3 RefSeq gene 1783031 1784677 . + . ID=gene1744;Dbxref=EcoGene:EG12357,GeneID:946213;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;gene_synonym=ECK1699,JW5910,ydiD;locus_tag=b1701 NC_000913.3 RefSeq CDS 1783031 1784677 . + 0 ID=cds1689;Parent=gene1744;Dbxref=ASAP:ABE-0005676,UniProtKB/Swiss-Prot:P38135,Genbank:NP_416216.4,EcoGene:EG12357,GeneID:946213;Name=NP_416216.4;Note=putative ligase/synthetase;gbkey=CDS;gene=fadK;product=short chain acyl-CoA synthetase%2C anaerobic;protein_id=NP_416216.4;transl_table=11 NC_000913.3 RefSeq gene 1784734 1787112 . - . ID=gene1745;Dbxref=EcoGene:EG10759,GeneID:946209;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;gene_synonym=ECK1700,JW1692,pps;locus_tag=b1702 NC_000913.3 RefSeq CDS 1784734 1787112 . - 0 ID=cds1690;Parent=gene1745;Dbxref=ASAP:ABE-0005678,UniProtKB/Swiss-Prot:P23538,Genbank:NP_416217.1,EcoGene:EG10759,GeneID:946209;Name=NP_416217.1;gbkey=CDS;gene=ppsA;product=phosphoenolpyruvate synthase;protein_id=NP_416217.1;transl_table=11 NC_000913.3 RefSeq gene 1787445 1788278 . + . ID=gene1746;Dbxref=EcoGene:EG11132,GeneID:946207;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;gene_synonym=duf299,ECK1701,JW1693,ydiA;locus_tag=b1703 NC_000913.3 RefSeq CDS 1787445 1788278 . + 0 ID=cds1691;Parent=gene1746;Dbxref=ASAP:ABE-0005682,UniProtKB/Swiss-Prot:P0A8A4,Genbank:NP_416218.1,EcoGene:EG11132,GeneID:946207;Name=NP_416218.1;gbkey=CDS;gene=ppsR;product=PEP synthase kinase and PEP synthase pyrophosphorylase;protein_id=NP_416218.1;transl_table=11 NC_000913.3 RefSeq gene 1788435 1789481 . + . ID=gene1747;Dbxref=EcoGene:EG10080,GeneID:946229;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;gene_synonym=ECK1702,JW1694;locus_tag=b1704 NC_000913.3 RefSeq CDS 1788435 1789481 . + 0 ID=cds1692;Parent=gene1747;Dbxref=ASAP:ABE-0005686,UniProtKB/Swiss-Prot:P00887,Genbank:NP_416219.1,EcoGene:EG10080,GeneID:946229;Name=NP_416219.1;Note=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase%2C tryptophan repressible);gbkey=CDS;gene=aroH;product=3-deoxy-D-arabino-heptulosonate-7-phosphate synthase%2C tryptophan repressible;protein_id=NP_416219.1;transl_table=11 NC_000913.3 RefSeq gene 1789613 1789804 . + . ID=gene1748;Dbxref=EcoGene:EG12391,GeneID:946205;Name=ydiE;gbkey=Gene;gene=ydiE;gene_biotype=protein_coding;gene_synonym=ECK1703,JW1695;locus_tag=b1705 NC_000913.3 RefSeq CDS 1789613 1789804 . + 0 ID=cds1693;Parent=gene1748;Dbxref=ASAP:ABE-0005692,UniProtKB/Swiss-Prot:P0ACX9,Genbank:NP_416220.1,EcoGene:EG12391,GeneID:946205;Name=NP_416220.1;gbkey=CDS;gene=ydiE;product=hemin uptake protein HemP homolog;protein_id=NP_416220.1;transl_table=11 NC_000913.3 RefSeq gene 1789808 1791244 . - . ID=gene1749;Dbxref=EcoGene:EG13980,GeneID:946219;Name=ydiU;gbkey=Gene;gene=ydiU;gene_biotype=protein_coding;gene_synonym=ECK1704,JW1696;locus_tag=b1706 NC_000913.3 RefSeq CDS 1789808 1791244 . - 0 ID=cds1694;Parent=gene1749;Dbxref=ASAP:ABE-0005694,UniProtKB/Swiss-Prot:P77649,Genbank:NP_416221.1,EcoGene:EG13980,GeneID:946219;Name=NP_416221.1;gbkey=CDS;gene=ydiU;product=UPF0061 family protein;protein_id=NP_416221.1;transl_table=11 NC_000913.3 RefSeq gene 1791307 1792020 . - . ID=gene1750;Dbxref=EcoGene:EG13981,GeneID:946217;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;gene_synonym=cdgR,ECK1705,JW1697;locus_tag=b1707 NC_000913.3 RefSeq CDS 1791307 1792020 . - 0 ID=cds1695;Parent=gene1750;Dbxref=ASAP:ABE-0005696,UniProtKB/Swiss-Prot:P76204,Genbank:NP_416222.1,EcoGene:EG13981,GeneID:946217;Name=NP_416222.1;gbkey=CDS;gene=ydiV;product=anti-FlhD4C2 factor%2C inactive EAL family phosphodiesterase;protein_id=NP_416222.1;transl_table=11 NC_000913.3 RefSeq gene 1792267 1792731 . - . ID=gene1751;Dbxref=EcoGene:EG11133,GeneID:946220;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;gene_synonym=ECK1706,JW1698;locus_tag=b1708 NC_000913.3 RefSeq CDS 1792267 1792731 . - 0 ID=cds1696;Parent=gene1751;Dbxref=ASAP:ABE-0005704,UniProtKB/Swiss-Prot:P23898,Genbank:NP_416223.1,EcoGene:EG11133,GeneID:946220;Name=NP_416223.1;Note=lipoprotein;gbkey=CDS;gene=nlpC;product=putative C40 clan peptidase lipoprotein;protein_id=NP_416223.1;transl_table=11 NC_000913.3 RefSeq gene 1792809 1793558 . - . ID=gene1752;Dbxref=EcoGene:EG10128,GeneID:945751;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;gene_synonym=ECK1707,JW1699;locus_tag=b1709 NC_000913.3 RefSeq CDS 1792809 1793558 . - 0 ID=cds1697;Parent=gene1752;Dbxref=ASAP:ABE-0005707,UniProtKB/Swiss-Prot:P06611,Genbank:NP_416224.1,EcoGene:EG10128,GeneID:945751;Name=NP_416224.1;Note=ATP-binding component of vitamin B12 transport system;gbkey=CDS;gene=btuD;product=vitamin B12 ABC transporter ATPase;protein_id=NP_416224.1;transl_table=11 NC_000913.3 RefSeq gene 1793558 1794109 . - . ID=gene1753;Dbxref=EcoGene:EG10129,GeneID:945915;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;gene_synonym=ECK1708,JW1700;locus_tag=b1710 NC_000913.3 RefSeq CDS 1793558 1794109 . - 0 ID=cds1698;Parent=gene1753;Dbxref=ASAP:ABE-0005709,UniProtKB/Swiss-Prot:P06610,Genbank:NP_416225.1,EcoGene:EG10129,GeneID:945915;Name=NP_416225.1;Note=vitamin B12 transport;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=NP_416225.1;transl_table=11 NC_000913.3 RefSeq gene 1794172 1795152 . - . ID=gene1754;Dbxref=EcoGene:EG10127,GeneID:945877;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;gene_synonym=ECK1709,JW1701;locus_tag=b1711 NC_000913.3 RefSeq CDS 1794172 1795152 . - 0 ID=cds1699;Parent=gene1754;Dbxref=ASAP:ABE-0005712,UniProtKB/Swiss-Prot:P06609,Genbank:NP_416226.1,EcoGene:EG10127,GeneID:945877;Name=NP_416226.1;Note=vitamin B12 transport permease protein;gbkey=CDS;gene=btuC;product=vitamin B12 ABC transporter permease;protein_id=NP_416226.1;transl_table=11 NC_000913.3 RefSeq gene 1795253 1795552 . - . ID=gene1755;Dbxref=EcoGene:EG10440,GeneID:945472;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;gene_synonym=ECK1710,hid,himA,JW1702;locus_tag=b1712 NC_000913.3 RefSeq CDS 1795253 1795552 . - 0 ID=cds1700;Parent=gene1755;Dbxref=ASAP:ABE-0005715,UniProtKB/Swiss-Prot:P0A6X7,Genbank:NP_416227.1,EcoGene:EG10440,GeneID:945472;Name=NP_416227.1;Note=integration host factor (IHF)%2C alpha subunit%3B site specific recombination;gbkey=CDS;gene=ihfA;product=integration host factor (IHF)%2C DNA-binding protein%2C alpha subunit;protein_id=NP_416227.1;transl_table=11 NC_000913.3 RefSeq gene 1795557 1797944 . - . ID=gene1756;Dbxref=EcoGene:EG10710,GeneID:945382;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;gene_synonym=ECK1711,JW1703;locus_tag=b1713 NC_000913.3 RefSeq CDS 1795557 1797944 . - 0 ID=cds1701;Parent=gene1756;Dbxref=ASAP:ABE-0005717,UniProtKB/Swiss-Prot:P07395,Genbank:NP_416228.1,EcoGene:EG10710,GeneID:945382;Name=NP_416228.1;Note=phenylalanine tRNA synthetase%2C beta-subunit;gbkey=CDS;gene=pheT;product=phenylalanine tRNA synthetase%2C beta subunit;protein_id=NP_416228.1;transl_table=11 NC_000913.3 RefSeq gene 1797959 1798942 . - . ID=gene1757;Dbxref=EcoGene:EG10709,GeneID:946223;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;gene_synonym=ECK1712,JW5277,phe-act;locus_tag=b1714 NC_000913.3 RefSeq CDS 1797959 1798942 . - 0 ID=cds1702;Parent=gene1757;Dbxref=ASAP:ABE-0005722,UniProtKB/Swiss-Prot:P08312,Genbank:NP_416229.1,EcoGene:EG10709,GeneID:946223;Name=NP_416229.1;Note=phenylalanine tRNA synthetase%2C alpha-subunit;gbkey=CDS;gene=pheS;product=phenylalanine tRNA synthetase%2C alpha subunit;protein_id=NP_416229.1;transl_table=11 NC_000913.3 RefSeq gene 1799226 1799270 . - . ID=gene1758;Dbxref=EcoGene:EG11272,GeneID:947212;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;gene_synonym=ECK1713,JW1705,phtL;locus_tag=b1715 NC_000913.3 RefSeq CDS 1799226 1799270 . - 0 ID=cds1703;Parent=gene1758;Dbxref=ASAP:ABE-0005727,UniProtKB/Swiss-Prot:P0AD74,Genbank:NP_416230.1,EcoGene:EG11272,GeneID:947212;Name=NP_416230.1;Note=phenylalanyl-tRNA synthetase (pheST) operon leader peptide;gbkey=CDS;gene=pheM;product=phenylalanyl-tRNA synthetase operon leader peptide;protein_id=NP_416230.1;transl_table=11 NC_000913.3 RefSeq gene 1799393 1799749 . - . ID=gene1759;Dbxref=EcoGene:EG10881,GeneID:945152;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;gene_synonym=ECK1714,JW1706,pdzA;locus_tag=b1716 NC_000913.3 RefSeq CDS 1799393 1799749 . - 0 ID=cds1704;Parent=gene1759;Dbxref=ASAP:ABE-0005729,UniProtKB/Swiss-Prot:P0A7L3,Genbank:NP_416231.1,EcoGene:EG10881,GeneID:945152;Name=NP_416231.1;Note=50S ribosomal subunit protein L20%2C and regulator;gbkey=CDS;gene=rplT;product=50S ribosomal subunit protein L20;protein_id=NP_416231.1;transl_table=11 NC_000913.3 RefSeq gene 1799802 1799999 . - . ID=gene1760;Dbxref=EcoGene:EG11231,GeneID:946349;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;gene_synonym=ECK1715,JW1707;locus_tag=b1717 NC_000913.3 RefSeq CDS 1799802 1799999 . - 0 ID=cds1705;Parent=gene1760;Dbxref=ASAP:ABE-0005732,UniProtKB/Swiss-Prot:P0A7Q1,Genbank:NP_416232.3,EcoGene:EG11231,GeneID:946349;Name=NP_416232.3;Note=50S ribosomal subunit protein A;gbkey=CDS;gene=rpmI;product=50S ribosomal subunit protein L35;protein_id=NP_416232.3;transl_table=11 NC_000913.3 RefSeq gene 1800096 1800638 . - . ID=gene1761;Dbxref=EcoGene:EG10506,GeneID:946225;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;gene_synonym=ECK1716,fit,JW5829,srjA;locus_tag=b1718 NC_000913.3 RefSeq CDS 1800096 1800638 . - 0 ID=cds1706;Parent=gene1761;Dbxref=ASAP:ABE-0005734,UniProtKB/Swiss-Prot:P0A707,Genbank:NP_416233.1,EcoGene:EG10506,GeneID:946225;Name=NP_416233.1;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=NP_416233.1;transl_table=11 NC_000913.3 RefSeq gene 1800642 1802570 . - . ID=gene1762;Dbxref=EcoGene:EG11001,GeneID:946222;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;gene_synonym=ECK1717,JW1709;locus_tag=b1719 NC_000913.3 RefSeq CDS 1800642 1802570 . - 0 ID=cds1707;Parent=gene1762;Dbxref=ASAP:ABE-0005736,UniProtKB/Swiss-Prot:P0A8M3,Genbank:NP_416234.1,EcoGene:EG11001,GeneID:946222;Name=NP_416234.1;Note=threonine tRNA synthetase;gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=NP_416234.1;transl_table=11 NC_000913.3 RefSeq gene 1803094 1804993 . + . ID=gene1763;Dbxref=EcoGene:EG13983,GeneID:948935;Name=arpB;gbkey=Gene;gene=arpB;gene_biotype=pseudogene;gene_synonym=ECK1718,JW1710,JW5278,ydiW,ydiX;locus_tag=b4494;pseudo=true NC_000913.3 RefSeq CDS 1803094 1803519 . + 0 ID=cds1708;Parent=gene1763;Dbxref=ASAP:ABE-0005740,ASAP:ABE-0005742,ASAP:ABE-0285095,UniProtKB/Swiss-Prot:P76205,EcoGene:EG13983,GeneID:948935;Note=pseudogene%2C ankyrin repeats;gbkey=CDS;gene=arpB;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 1803518 1804993 . + 0 ID=cds1708;Parent=gene1763;Dbxref=ASAP:ABE-0005740,ASAP:ABE-0005742,ASAP:ABE-0285095,UniProtKB/Swiss-Prot:P76205,EcoGene:EG13983,GeneID:948935;Note=pseudogene%2C ankyrin repeats;gbkey=CDS;gene=arpB;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 1805165 1805272 . + . ID=gene1764;Dbxref=EcoGene:EG14423,GeneID:1450269;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;gene_synonym=ECK1719,JW5911;locus_tag=b4535 NC_000913.3 RefSeq CDS 1805165 1805272 . + 0 ID=cds1709;Parent=gene1764;Dbxref=ASAP:ABE-0285056,UniProtKB/Swiss-Prot:Q2EES1,Genbank:YP_588455.2,EcoGene:EG14423,GeneID:1450269;Name=YP_588455.2;gbkey=CDS;gene=yniD;product=uncharacterized protein;protein_id=YP_588455.2;transl_table=11 NC_000913.3 RefSeq gene 1805325 1806083 . - . ID=gene1765;Dbxref=EcoGene:EG13984,GeneID:946218;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;gene_synonym=ECK1720,JW1711;locus_tag=b1722 NC_000913.3 RefSeq CDS 1805325 1806083 . - 0 ID=cds1710;Parent=gene1765;Dbxref=ASAP:ABE-0005744,UniProtKB/Swiss-Prot:P76206,Genbank:NP_416236.1,EcoGene:EG13984,GeneID:946218;Name=NP_416236.1;gbkey=CDS;gene=ydiY;product=acid-inducible putative outer membrane protein;protein_id=NP_416236.1;transl_table=11 NC_000913.3 RefSeq gene 1806370 1807299 . + . ID=gene1766;Dbxref=EcoGene:EG10700,GeneID:946230;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;gene_synonym=ECK1721,JW5280;locus_tag=b1723 NC_000913.3 RefSeq CDS 1806370 1807299 . + 0 ID=cds1711;Parent=gene1766;Dbxref=ASAP:ABE-0005748,UniProtKB/Swiss-Prot:P06999,Genbank:NP_416237.3,EcoGene:EG10700,GeneID:946230;Name=NP_416237.3;Note=6-phosphofructokinase II%3B suppressor of pfkA;gbkey=CDS;gene=pfkB;product=6-phosphofructokinase II;protein_id=NP_416237.3;transl_table=11 NC_000913.3 RefSeq gene 1807400 1807690 . + . ID=gene1767;Dbxref=EcoGene:EG13985,GeneID:946232;Name=ydiZ;gbkey=Gene;gene=ydiZ;gene_biotype=protein_coding;gene_synonym=ECK1722,JW1713;locus_tag=b1724 NC_000913.3 RefSeq CDS 1807400 1807690 . + 0 ID=cds1712;Parent=gene1767;Dbxref=ASAP:ABE-0005751,UniProtKB/Swiss-Prot:P64479,Genbank:NP_416238.1,EcoGene:EG13985,GeneID:946232;Name=NP_416238.1;gbkey=CDS;gene=ydiZ;product=uncharacterized protein;protein_id=NP_416238.1;transl_table=11 NC_000913.3 RefSeq gene 1807796 1808656 . + . ID=gene1768;Dbxref=EcoGene:EG13986,GeneID:946236;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;gene_synonym=ECK1723,JW1714;locus_tag=b1725 NC_000913.3 RefSeq CDS 1807796 1808656 . + 0 ID=cds1713;Parent=gene1768;Dbxref=ASAP:ABE-0005755,UniProtKB/Swiss-Prot:P77739,Genbank:NP_416239.1,EcoGene:EG13986,GeneID:946236;Name=NP_416239.1;gbkey=CDS;gene=yniA;product=fructosamine kinase family protein;protein_id=NP_416239.1;transl_table=11 NC_000913.3 RefSeq gene 1808697 1809233 . - . ID=gene1769;Dbxref=EcoGene:EG13987,GeneID:945140;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;gene_synonym=ECK1724,JW1715;locus_tag=b1726 NC_000913.3 RefSeq CDS 1808697 1809233 . - 0 ID=cds1714;Parent=gene1769;Dbxref=ASAP:ABE-0005757,UniProtKB/Swiss-Prot:P76208,Genbank:NP_416240.1,EcoGene:EG13987,GeneID:945140;Name=NP_416240.1;gbkey=CDS;gene=yniB;product=putative inner membrane protein;protein_id=NP_416240.1;transl_table=11 NC_000913.3 RefSeq gene 1809380 1810048 . + . ID=gene1770;Dbxref=EcoGene:EG13988,GeneID:945632;Name=yniC;gbkey=Gene;gene=yniC;gene_biotype=protein_coding;gene_synonym=ECK1725,JW1716;locus_tag=b1727 NC_000913.3 RefSeq CDS 1809380 1810048 . + 0 ID=cds1715;Parent=gene1770;Dbxref=ASAP:ABE-0005761,UniProtKB/Swiss-Prot:P77247,Genbank:NP_416241.1,EcoGene:EG13988,GeneID:945632;Name=NP_416241.1;Note=putative phosphatase;gbkey=CDS;gene=yniC;product=2-deoxyglucose-6-P phosphatase;protein_id=NP_416241.1;transl_table=11 NC_000913.3 RefSeq gene 1810211 1810801 . + . ID=gene1771;Dbxref=EcoGene:EG13989,GeneID:945644;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;gene_synonym=ECK1726,JW5281;locus_tag=b1728 NC_000913.3 RefSeq CDS 1810211 1810801 . + 0 ID=cds1716;Parent=gene1771;Dbxref=ASAP:ABE-0005768,UniProtKB/Swiss-Prot:P64481,Genbank:NP_416242.6,EcoGene:EG13989,GeneID:945644;Name=NP_416242.6;gbkey=CDS;gene=ydjM;product=inner membrane protein regulated by LexA;protein_id=NP_416242.6;transl_table=11 NC_000913.3 RefSeq gene 1810934 1812325 . + . ID=gene1772;Dbxref=EcoGene:EG13990,GeneID:946238;Name=ydjN;gbkey=Gene;gene=ydjN;gene_biotype=protein_coding;gene_synonym=ECK1727,JW1718;locus_tag=b1729 NC_000913.3 RefSeq CDS 1810934 1812325 . + 0 ID=cds1717;Parent=gene1772;Dbxref=ASAP:ABE-0005771,UniProtKB/Swiss-Prot:P77529,Genbank:NP_416243.1,EcoGene:EG13990,GeneID:946238;Name=NP_416243.1;gbkey=CDS;gene=ydjN;product=putative transporter;protein_id=NP_416243.1;transl_table=11 NC_000913.3 RefSeq gene 1812329 1813132 . - . ID=gene1773;Dbxref=EcoGene:EG13991,GeneID:946237;Name=ydjO;gbkey=Gene;gene=ydjO;gene_biotype=protein_coding;gene_synonym=ECK1728,JW1719;locus_tag=b1730 NC_000913.3 RefSeq CDS 1812329 1813132 . - 0 ID=cds1718;Parent=gene1773;Dbxref=ASAP:ABE-0005773,UniProtKB/Swiss-Prot:P76210,Genbank:NP_416244.2,EcoGene:EG13991,GeneID:946237;Name=NP_416244.2;gbkey=CDS;gene=ydjO;product=uncharacterized protein;protein_id=NP_416244.2;transl_table=11 NC_000913.3 RefSeq gene 1813421 1813663 . - . ID=gene1774;Dbxref=EcoGene:EG13992,GeneID:946235;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;gene_synonym=ECK1729,JW1720,ydjP;locus_tag=b1731 NC_000913.3 RefSeq CDS 1813421 1813663 . - 0 ID=cds1719;Parent=gene1774;Dbxref=ASAP:ABE-0005776,UniProtKB/Swiss-Prot:P0AE60,Genbank:NP_416245.2,EcoGene:EG13992,GeneID:946235;Name=NP_416245.2;gbkey=CDS;gene=cedA;product=cell division modulator;protein_id=NP_416245.2;transl_table=11 NC_000913.3 RefSeq gene 1813867 1816128 . + . ID=gene1775;Dbxref=EcoGene:EG10509,GeneID:946234;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;gene_synonym=ECK1730,JW1721;locus_tag=b1732 NC_000913.3 RefSeq CDS 1813867 1816128 . + 0 ID=cds1720;Parent=gene1775;Dbxref=ASAP:ABE-0005780,UniProtKB/Swiss-Prot:P21179,Genbank:YP_025308.1,EcoGene:EG10509,GeneID:946234;Name=YP_025308.1;Note=catalase%3B hydroperoxidase HPII(III);gbkey=CDS;gene=katE;product=catalase HPII%2C heme d-containing;protein_id=YP_025308.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1816185 1816373 . + . ID=id216;Note=RIP129 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1816386 1817135 . - . ID=gene1776;Dbxref=EcoGene:EG12198,GeneID:946231;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;gene_synonym=celG,ECK1731,JW1722,ydjC;locus_tag=b1733 NC_000913.3 RefSeq CDS 1816386 1817135 . - 0 ID=cds1721;Parent=gene1776;Dbxref=ASAP:ABE-0005783,UniProtKB/Swiss-Prot:P37794,Genbank:NP_416247.1,EcoGene:EG12198,GeneID:946231;Name=NP_416247.1;gbkey=CDS;gene=chbG;product=chito-oligosaccharide deacetylase;protein_id=NP_416247.1;transl_table=11 NC_000913.3 RefSeq gene 1817148 1818500 . - . ID=gene1777;Dbxref=EcoGene:EG10144,GeneID:946266;Name=chbF;gbkey=Gene;gene=chbF;gene_biotype=protein_coding;gene_synonym=celF,ECK1732,JW1723,ydjD;locus_tag=b1734 NC_000913.3 RefSeq CDS 1817148 1818500 . - 0 ID=cds1722;Parent=gene1777;Dbxref=ASAP:ABE-0005785,UniProtKB/Swiss-Prot:P17411,Genbank:NP_416248.1,EcoGene:EG10144,GeneID:946266;Name=NP_416248.1;gbkey=CDS;gene=chbF;product=phospho-chitobiase%3B general 6-phospho-beta-glucosidase activity;protein_id=NP_416248.1;transl_table=11 NC_000913.3 RefSeq gene 1818605 1819447 . - . ID=gene1778;Dbxref=EcoGene:EG10143,GeneID:946247;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;gene_synonym=celD,ECK1733,JW1724;locus_tag=b1735 NC_000913.3 RefSeq CDS 1818605 1819447 . - 0 ID=cds1723;Parent=gene1778;Dbxref=ASAP:ABE-0005790,UniProtKB/Swiss-Prot:P17410,Genbank:NP_416249.1,EcoGene:EG10143,GeneID:946247;Name=NP_416249.1;Note=negative transcriptional regulator of cel operon;gbkey=CDS;gene=chbR;product=repressor of chb operon for N%2CN'-diacetylchitobiose utilization;protein_id=NP_416249.1;transl_table=11 NC_000913.3 RefSeq gene 1819455 1819805 . - . ID=gene1779;Dbxref=EcoGene:EG10142,GeneID:946244;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;gene_synonym=celC,ECK1734,JW1725;locus_tag=b1736 NC_000913.3 RefSeq CDS 1819455 1819805 . - 0 ID=cds1724;Parent=gene1779;Dbxref=ASAP:ABE-0005792,UniProtKB/Swiss-Prot:P69791,Genbank:NP_416250.1,EcoGene:EG10142,GeneID:946244;Name=NP_416250.1;Note=PTS family enzyme IIA%2C cellobiose/arbutin/salicin sugar-specific;gbkey=CDS;gene=chbA;product=N%2CN'-diacetylchitobiose-specific enzyme IIA component of PTS;protein_id=NP_416250.1;transl_table=11 NC_000913.3 RefSeq gene 1819856 1821214 . - . ID=gene1780;Dbxref=EcoGene:EG10141,GeneID:945982;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;gene_synonym=celB,ECK1735,JW1726;locus_tag=b1737 NC_000913.3 RefSeq CDS 1819856 1821214 . - 0 ID=cds1725;Parent=gene1780;Dbxref=ASAP:ABE-0005795,UniProtKB/Swiss-Prot:P17334,Genbank:NP_416251.1,EcoGene:EG10141,GeneID:945982;Name=NP_416251.1;Note=PEP-dependent phosphotransferase enzyme II for cellobiose%2C arbutin%2C and salicin;gbkey=CDS;gene=chbC;product=N%2CN'-diacetylchitobiose-specific enzyme IIC component of PTS;protein_id=NP_416251.1;transl_table=11 NC_000913.3 RefSeq gene 1821299 1821619 . - . ID=gene1781;Dbxref=EcoGene:EG10140,GeneID:945339;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;gene_synonym=celA,ECK1736,JW1727;locus_tag=b1738 NC_000913.3 RefSeq CDS 1821299 1821619 . - 0 ID=cds1726;Parent=gene1781;Dbxref=ASAP:ABE-0005797,UniProtKB/Swiss-Prot:P69795,Genbank:NP_416252.1,EcoGene:EG10140,GeneID:945339;Name=NP_416252.1;Note=PTS family enzyme IIB%2C cellobiose/arbutin/salicin sugar-specific;gbkey=CDS;gene=chbB;product=N%2CN'-diacetylchitobiose-specific enzyme IIB component of PTS;protein_id=NP_416252.1;transl_table=11 NC_000913.3 RefSeq gene 1821918 1822256 . - . ID=gene1782;Dbxref=EcoGene:EG10044,GeneID:945305;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;gene_synonym=anr,ECK1737,JW1728;locus_tag=b1739 NC_000913.3 RefSeq CDS 1821918 1822256 . - 0 ID=cds1727;Parent=gene1782;Dbxref=ASAP:ABE-0005799,UniProtKB/Swiss-Prot:P0ADB1,Genbank:NP_416253.1,EcoGene:EG10044,GeneID:945305;Name=NP_416253.1;Note=activator of ntrL gene;gbkey=CDS;gene=osmE;product=osmotically-inducible lipoprotein;protein_id=NP_416253.1;transl_table=11 NC_000913.3 RefSeq gene 1822458 1823285 . + . ID=gene1783;Dbxref=EcoGene:EG10663,GeneID:946946;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;gene_synonym=ECK1738,efg,JW1729,ntrL;locus_tag=b1740 NC_000913.3 RefSeq CDS 1822458 1823285 . + 0 ID=cds1728;Parent=gene1783;Dbxref=ASAP:ABE-0005803,UniProtKB/Swiss-Prot:P18843,Genbank:NP_416254.1,EcoGene:EG10663,GeneID:946946;Name=NP_416254.1;Note=NAD synthetase%2C prefers NH3 over glutamine;gbkey=CDS;gene=nadE;product=NAD synthetase%2C NH3/glutamine-dependent;protein_id=NP_416254.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1823331 1823428 . + . ID=id217;Note=RIP130 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1823515 1824402 . + . ID=gene1784;Dbxref=EcoGene:EG13993,GeneID:948996;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;gene_synonym=dinM,ECK1739,JW1730,sosD,ydjQ;locus_tag=b1741 NC_000913.3 RefSeq CDS 1823515 1824402 . + 0 ID=cds1729;Parent=gene1784;Dbxref=ASAP:ABE-0005807,UniProtKB/Swiss-Prot:P76213,Genbank:NP_416255.1,EcoGene:EG13993,GeneID:948996;Name=NP_416255.1;Note=putative excinuclease subunit;gbkey=CDS;gene=cho;product=endonuclease of nucleotide excision repair;protein_id=NP_416255.1;transl_table=11 NC_000913.3 RefSeq gene 1824362 1824937 . - . ID=gene1785;Dbxref=EcoGene:EG13994,GeneID:946245;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;gene_synonym=ECK1740,JW1731,ydjR;locus_tag=b1742 NC_000913.3 RefSeq CDS 1824362 1824937 . - 0 ID=cds1730;Parent=gene1785;Dbxref=ASAP:ABE-0005809,UniProtKB/Swiss-Prot:P76214,Genbank:NP_416256.2,EcoGene:EG13994,GeneID:946245;Name=NP_416256.2;gbkey=CDS;gene=ves;product=cold- and stress-inducible protein;protein_id=NP_416256.2;transl_table=11 NC_000913.3 RefSeq gene 1825140 1825625 . - . ID=gene1786;Dbxref=EcoGene:EG13490,GeneID:946253;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;gene_synonym=ECK1741,JW1732;locus_tag=b1743 NC_000913.3 RefSeq CDS 1825140 1825625 . - 0 ID=cds1731;Parent=gene1786;Dbxref=ASAP:ABE-0005812,UniProtKB/Swiss-Prot:P77754,Genbank:NP_416257.1,EcoGene:EG13490,GeneID:946253;Name=NP_416257.1;Note=periplasmic protein related to spheroblast formation;gbkey=CDS;gene=spy;product=periplasmic ATP-independent protein refolding chaperone%2C stress-induced;protein_id=NP_416257.1;transl_table=11 NC_000913.3 RefSeq gene 1825955 1826923 . - . ID=gene1787;Dbxref=EcoGene:EG13995,GeneID:946256;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;gene_synonym=ECK1742,JW1733,ydjS;locus_tag=b1744 NC_000913.3 RefSeq CDS 1825955 1826923 . - 0 ID=cds1732;Parent=gene1787;Dbxref=ASAP:ABE-0005815,UniProtKB/Swiss-Prot:P76215,Genbank:NP_416258.1,EcoGene:EG13995,GeneID:946256;Name=NP_416258.1;gbkey=CDS;gene=astE;product=succinylglutamate desuccinylase;protein_id=NP_416258.1;transl_table=11 NC_000913.3 RefSeq gene 1826916 1828259 . - . ID=gene1788;Dbxref=EcoGene:EG13996,GeneID:946259;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;gene_synonym=ECK1743,JW1734,ydjT;locus_tag=b1745 NC_000913.3 RefSeq CDS 1826916 1828259 . - 0 ID=cds1733;Parent=gene1788;Dbxref=ASAP:ABE-0005817,UniProtKB/Swiss-Prot:P76216,Genbank:NP_416259.1,EcoGene:EG13996,GeneID:946259;Name=NP_416259.1;gbkey=CDS;gene=astB;product=succinylarginine dihydrolase;protein_id=NP_416259.1;transl_table=11 NC_000913.3 RefSeq gene 1828256 1829734 . - . ID=gene1789;Dbxref=EcoGene:EG13997,GeneID:946260;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;gene_synonym=ECK1744,JW5282,ydjU;locus_tag=b1746 NC_000913.3 RefSeq CDS 1828256 1829734 . - 0 ID=cds1734;Parent=gene1789;Dbxref=ASAP:ABE-0005820,UniProtKB/Swiss-Prot:P76217,Genbank:NP_416260.1,EcoGene:EG13997,GeneID:946260;Name=NP_416260.1;gbkey=CDS;gene=astD;product=succinylglutamic semialdehyde dehydrogenase;protein_id=NP_416260.1;transl_table=11 NC_000913.3 RefSeq gene 1829731 1830765 . - . ID=gene1790;Dbxref=EcoGene:EG13998,GeneID:946261;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;gene_synonym=ECK1745,JW1736,ydjV;locus_tag=b1747 NC_000913.3 RefSeq CDS 1829731 1830765 . - 0 ID=cds1735;Parent=gene1790;Dbxref=ASAP:ABE-0005822,UniProtKB/Swiss-Prot:P0AE37,Genbank:NP_416261.1,EcoGene:EG13998,GeneID:946261;Name=NP_416261.1;gbkey=CDS;gene=astA;product=arginine succinyltransferase;protein_id=NP_416261.1;transl_table=11 NC_000913.3 RefSeq gene 1830762 1831982 . - . ID=gene1791;Dbxref=EcoGene:EG13999,GeneID:946255;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;gene_synonym=argM,cstC,ECK1746,JW1737,ydjW;locus_tag=b1748 NC_000913.3 RefSeq CDS 1830762 1831982 . - 0 ID=cds1736;Parent=gene1791;Dbxref=ASAP:ABE-0005824,UniProtKB/Swiss-Prot:P77581,Genbank:NP_416262.1,EcoGene:EG13999,GeneID:946255;Name=NP_416262.1;Note=acetylornithine delta-aminotransferase;gbkey=CDS;gene=astC;product=succinylornithine transaminase%2C PLP-dependent;protein_id=NP_416262.1;transl_table=11 NC_000913.3 RefSeq gene 1832428 1833234 . + . ID=gene1792;Dbxref=EcoGene:EG11073,GeneID:946254;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;gene_synonym=ECK1747,JW1738,xth;locus_tag=b1749 NC_000913.3 RefSeq CDS 1832428 1833234 . + 0 ID=cds1737;Parent=gene1792;Dbxref=ASAP:ABE-0005829,UniProtKB/Swiss-Prot:P09030,Genbank:NP_416263.1,EcoGene:EG11073,GeneID:946254;Name=NP_416263.1;gbkey=CDS;gene=xthA;product=exonuclease III;protein_id=NP_416263.1;transl_table=11 NC_000913.3 RefSeq gene 1833401 1834111 . + . ID=gene1793;Dbxref=EcoGene:EG14000,GeneID:946250;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;gene_synonym=ECK1748,JW1739;locus_tag=b1750 NC_000913.3 RefSeq CDS 1833401 1834111 . + 0 ID=cds1738;Parent=gene1793;Dbxref=ASAP:ABE-0005832,UniProtKB/Swiss-Prot:P76219,Genbank:NP_416264.4,EcoGene:EG14000,GeneID:946250;Name=NP_416264.4;gbkey=CDS;gene=ydjX;product=TVP38/TMEM64 family inner membrane protein;protein_id=NP_416264.4;transl_table=11 NC_000913.3 RefSeq gene 1834116 1834793 . + . ID=gene1794;Dbxref=EcoGene:EG14001,GeneID:946248;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;gene_synonym=ECK1749,JW5283;locus_tag=b1751 NC_000913.3 RefSeq CDS 1834116 1834793 . + 0 ID=cds1739;Parent=gene1794;Dbxref=ASAP:ABE-0005834,UniProtKB/Swiss-Prot:P76220,Genbank:NP_416265.4,EcoGene:EG14001,GeneID:946248;Name=NP_416265.4;gbkey=CDS;gene=ydjY;product=putative ferrodoxin-like lipoprotein;protein_id=NP_416265.4;transl_table=11 NC_000913.3 RefSeq gene 1834808 1835515 . + . ID=gene1795;Dbxref=EcoGene:EG14002,GeneID:946269;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;gene_synonym=ECK1750,JW1741;locus_tag=b1752 NC_000913.3 RefSeq CDS 1834808 1835515 . + 0 ID=cds1740;Parent=gene1795;Dbxref=ASAP:ABE-0005837,UniProtKB/Swiss-Prot:P76221,Genbank:NP_416266.1,EcoGene:EG14002,GeneID:946269;Name=NP_416266.1;gbkey=CDS;gene=ydjZ;product=TVP38/TMEM64 family inner membrane protein;protein_id=NP_416266.1;transl_table=11 NC_000913.3 RefSeq gene 1835515 1836063 . + . ID=gene1796;Dbxref=EcoGene:EG14003,GeneID:946270;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;gene_synonym=ECK1751,JW1742;locus_tag=b1753 NC_000913.3 RefSeq CDS 1835515 1836063 . + 0 ID=cds1741;Parent=gene1796;Dbxref=ASAP:ABE-0005839,UniProtKB/Swiss-Prot:P76222,Genbank:NP_416267.1,EcoGene:EG14003,GeneID:946270;Name=NP_416267.1;gbkey=CDS;gene=ynjA;product=carboxymuconolactone decarboxylase family protein;protein_id=NP_416267.1;transl_table=11 NC_000913.3 RefSeq gene 1836073 1837239 . + . ID=gene1797;Dbxref=EcoGene:EG14004,GeneID:946271;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;gene_synonym=ECK1752,JW5284;locus_tag=b1754 NC_000913.3 RefSeq CDS 1836073 1837239 . + 0 ID=cds1742;Parent=gene1797;Dbxref=ASAP:ABE-0005841,UniProtKB/Swiss-Prot:P76223,Genbank:NP_416268.2,EcoGene:EG14004,GeneID:946271;Name=NP_416268.2;gbkey=CDS;gene=ynjB;product=putative ABC transporter periplasmic binding protein;protein_id=NP_416268.2;transl_table=11 NC_000913.3 RefSeq gene 1837212 1838747 . + . ID=gene1798;Dbxref=EcoGene:EG14005,GeneID:946273;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;gene_synonym=ECK1753,JW5285;locus_tag=b1755 NC_000913.3 RefSeq CDS 1837212 1838747 . + 0 ID=cds1743;Parent=gene1798;Dbxref=ASAP:ABE-0005843,UniProtKB/Swiss-Prot:P76224,Genbank:NP_416269.4,EcoGene:EG14005,GeneID:946273;Name=NP_416269.4;Note=putative transport system permease protein;gbkey=CDS;gene=ynjC;product=putative ABC transporter permease;protein_id=NP_416269.4;transl_table=11 NC_000913.3 RefSeq gene 1838747 1839400 . + . ID=gene1799;Dbxref=EcoGene:EG14006,GeneID:944965;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;gene_synonym=ECK1754,JW5286;locus_tag=b1756 NC_000913.3 RefSeq CDS 1838747 1839400 . + 0 ID=cds1744;Parent=gene1799;Dbxref=ASAP:ABE-0005845,UniProtKB/Swiss-Prot:P76909,Genbank:NP_416270.1,EcoGene:EG14006,GeneID:944965;Name=NP_416270.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=ynjD;product=putative ABC transporter ATPase;protein_id=NP_416270.1;transl_table=11 NC_000913.3 RefSeq gene 1839467 1840774 . + . ID=gene1800;Dbxref=EcoGene:EG14007,GeneID:946505;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;gene_synonym=ECK1755,JW5287;locus_tag=b1757 NC_000913.3 RefSeq CDS 1839467 1840774 . + 0 ID=cds1745;Parent=gene1800;Dbxref=ASAP:ABE-0005848,UniProtKB/Swiss-Prot:P78067,Genbank:NP_416271.4,EcoGene:EG14007,GeneID:946505;Name=NP_416271.4;Note=putative thiosulfate sulfur transferase;gbkey=CDS;gene=ynjE;product=molybdopterin synthase sulfurtransferase;protein_id=NP_416271.4;transl_table=11 NC_000913.3 RefSeq gene 1840783 1841403 . - . ID=gene1801;Dbxref=EcoGene:EG14008,GeneID:946221;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;gene_synonym=ECK1756,JW1747;locus_tag=b1758 NC_000913.3 RefSeq CDS 1840783 1841403 . - 0 ID=cds1746;Parent=gene1801;Dbxref=ASAP:ABE-0005850,UniProtKB/Swiss-Prot:P76226,Genbank:NP_416272.2,EcoGene:EG14008,GeneID:946221;Name=NP_416272.2;Note=putative cytochrome oxidase;gbkey=CDS;gene=ynjF;product=CDP-alcohol phosphatidyltransferase family inner membrane protein;protein_id=NP_416272.2;transl_table=11 NC_000913.3 RefSeq gene 1841490 1841897 . + . ID=gene1802;Dbxref=EcoGene:EG14009,GeneID:946277;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;gene_synonym=ECK1757,JW1748,orf135,ynjG;locus_tag=b1759 NC_000913.3 RefSeq CDS 1841490 1841897 . + 0 ID=cds1747;Parent=gene1802;Dbxref=ASAP:ABE-0005855,UniProtKB/Swiss-Prot:P77788,Genbank:NP_416273.1,EcoGene:EG14009,GeneID:946277;Name=NP_416273.1;Note=5-hydroxy-CTP pyrophosphohydrolase;gbkey=CDS;gene=nudG;product=CTP pyrophosphohydrolase%3B also hydrolyzes 2-hydroxy-dATP%2C 8-hydroxy-dGTP%2C 5-hydroxy-CTP%2C dCTP and 5-methyl-dCTP;protein_id=NP_416273.1;transl_table=11 NC_000913.3 RefSeq gene 1841863 1842135 . - . ID=gene1803;Dbxref=EcoGene:EG14010,GeneID:946279;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;gene_synonym=ECK1758,JW1749;locus_tag=b1760 NC_000913.3 RefSeq CDS 1841863 1842135 . - 0 ID=cds1748;Parent=gene1803;Dbxref=ASAP:ABE-0005858,UniProtKB/Swiss-Prot:P76227,Genbank:NP_416274.1,EcoGene:EG14010,GeneID:946279;Name=NP_416274.1;gbkey=CDS;gene=ynjH;product=DUF1496 family protein;protein_id=NP_416274.1;transl_table=11 NC_000913.3 RefSeq gene 1842371 1843714 . + . ID=gene1804;Dbxref=EcoGene:EG10372,GeneID:946802;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;gene_synonym=ECK1759,JW1750;locus_tag=b1761 NC_000913.3 RefSeq CDS 1842371 1843714 . + 0 ID=cds1749;Parent=gene1804;Dbxref=ASAP:ABE-0005865,UniProtKB/Swiss-Prot:P00370,Genbank:NP_416275.1,EcoGene:EG10372,GeneID:946802;Name=NP_416275.1;Note=NADP-specific glutamate dehydrogenase;gbkey=CDS;gene=gdhA;product=glutamate dehydrogenase%2C NADP-specific;protein_id=NP_416275.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1843724 1843816 . + . ID=id218;Note=REP131 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1843831 1844871 . - . ID=gene1805;Dbxref=EcoGene:EG14011,GeneID:946239;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=protein_coding;gene_synonym=ECK1760,JW5288;locus_tag=b1762 NC_000913.3 RefSeq CDS 1843831 1844871 . - 0 ID=cds1750;Parent=gene1805;Dbxref=ASAP:ABE-0005867,UniProtKB/Swiss-Prot:P76228,Genbank:NP_416276.4,EcoGene:EG14011,GeneID:946239;Name=NP_416276.4;gbkey=CDS;gene=ynjI;product=inner membrane protein;protein_id=NP_416276.4;transl_table=11 NC_000913.3 RefSeq gene 1844999 1846960 . - . ID=gene1806;Dbxref=EcoGene:EG11014,GeneID:946141;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;gene_synonym=ECK1761,JW1752,mutR;locus_tag=b1763 NC_000913.3 RefSeq CDS 1844999 1846960 . - 0 ID=cds1751;Parent=gene1806;Dbxref=ASAP:ABE-0005869,UniProtKB/Swiss-Prot:P14294,Genbank:NP_416277.1,EcoGene:EG11014,GeneID:946141;Name=NP_416277.1;gbkey=CDS;gene=topB;product=DNA topoisomerase III;protein_id=NP_416277.1;transl_table=11 NC_000913.3 RefSeq gene 1846965 1848008 . - . ID=gene1807;Dbxref=EcoGene:EG10943,GeneID:946768;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;gene_synonym=ECK1762,fdhB,JW1753;locus_tag=b1764 NC_000913.3 RefSeq CDS 1846965 1848008 . - 0 ID=cds1752;Parent=gene1807;Dbxref=ASAP:ABE-0005872,UniProtKB/Swiss-Prot:P16456,Genbank:NP_416278.1,EcoGene:EG10943,GeneID:946768;Name=NP_416278.1;Note=selenophosphate synthase%2C H(2)Se added to acrylyl-tRNA;gbkey=CDS;gene=selD;product=selenophosphate synthase;protein_id=NP_416278.1;transl_table=11 NC_000913.3 RefSeq gene 1848125 1848676 . - . ID=gene1808;Dbxref=EcoGene:EG11134,GeneID:945964;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;gene_synonym=ECK1763,JW1754;locus_tag=b1765 NC_000913.3 RefSeq CDS 1848125 1848676 . - 0 ID=cds1753;Parent=gene1808;Dbxref=ASAP:ABE-0005875,UniProtKB/Swiss-Prot:P0ACY1,Genbank:NP_416279.1,EcoGene:EG11134,GeneID:945964;Name=NP_416279.1;gbkey=CDS;gene=ydjA;product=putative oxidoreductase;protein_id=NP_416279.1;transl_table=11 NC_000913.3 RefSeq gene 1848837 1850693 . + . ID=gene1809;Dbxref=EcoGene:EG10968,GeneID:946281;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;gene_synonym=ECK1764,JW1755;locus_tag=b1766 NC_000913.3 RefSeq CDS 1848837 1850693 . + 0 ID=cds1754;Parent=gene1809;Dbxref=ASAP:ABE-0005880,UniProtKB/Swiss-Prot:P08395,Genbank:NP_416280.1,EcoGene:EG10968,GeneID:946281;Name=NP_416280.1;Note=protease IV%2C a signal peptide peptidase;gbkey=CDS;gene=sppA;product=protease IV (signal peptide peptidase);protein_id=NP_416280.1;transl_table=11 NC_000913.3 RefSeq gene 1850860 1851876 . + . ID=gene1810;Dbxref=EcoGene:EG10045,GeneID:946278;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;gene_synonym=ECK1765,JW1756;locus_tag=b1767 NC_000913.3 RefSeq CDS 1850860 1851876 . + 0 ID=cds1755;Parent=gene1810;Dbxref=ASAP:ABE-0005886,UniProtKB/Swiss-Prot:P0A962,Genbank:NP_416281.1,EcoGene:EG10045,GeneID:946278;Name=NP_416281.1;gbkey=CDS;gene=ansA;product=cytoplasmic L-asparaginase 1;protein_id=NP_416281.1;transl_table=11 NC_000913.3 RefSeq gene 1851887 1852528 . + . ID=gene1811;Dbxref=EcoGene:EG11135,GeneID:946276;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;gene_synonym=ECK1766,JW1757,nam,ydjB;locus_tag=b1768 NC_000913.3 RefSeq CDS 1851887 1852528 . + 0 ID=cds1756;Parent=gene1811;Dbxref=ASAP:ABE-0005891,UniProtKB/Swiss-Prot:P21369,Genbank:NP_416282.4,EcoGene:EG11135,GeneID:946276;Name=NP_416282.4;gbkey=CDS;gene=pncA;product=nicotinamidase/pyrazinamidase;protein_id=NP_416282.4;transl_table=11 NC_000913.3 RefSeq repeat_region 1852562 1852597 . + . ID=id219;Note=REP132 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1852621 1853979 . - . ID=gene1812;Dbxref=EcoGene:EG12369,GeneID:946274;Name=ydjE;gbkey=Gene;gene=ydjE;gene_biotype=protein_coding;gene_synonym=ECK1767,JW1758;locus_tag=b1769 NC_000913.3 RefSeq CDS 1852621 1853979 . - 0 ID=cds1757;Parent=gene1812;Dbxref=ASAP:ABE-0005894,UniProtKB/Swiss-Prot:P38055,Genbank:NP_416283.1,EcoGene:EG12369,GeneID:946274;Name=NP_416283.1;Note=putative transport protein;gbkey=CDS;gene=ydjE;product=putative MFS sugar transporter%2C membrane protein;protein_id=NP_416283.1;transl_table=11 NC_000913.3 RefSeq gene 1854096 1854854 . - . ID=gene1813;Dbxref=EcoGene:EG13482,GeneID:946272;Name=ydjF;gbkey=Gene;gene=ydjF;gene_biotype=protein_coding;gene_synonym=ECK1768,JW1759;locus_tag=b1770 NC_000913.3 RefSeq CDS 1854096 1854854 . - 0 ID=cds1758;Parent=gene1813;Dbxref=ASAP:ABE-0005897,UniProtKB/Swiss-Prot:P77721,Genbank:NP_416284.1,EcoGene:EG13482,GeneID:946272;Name=NP_416284.1;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=ydjF;product=putative DNA-binding transcriptional regulator;protein_id=NP_416284.1;transl_table=11 NC_000913.3 RefSeq gene 1854991 1855971 . - . ID=gene1814;Dbxref=EcoGene:EG13483,GeneID:946283;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;gene_synonym=ECK1769,JW1760;locus_tag=b1771 NC_000913.3 RefSeq CDS 1854991 1855971 . - 0 ID=cds1759;Parent=gene1814;Dbxref=ASAP:ABE-0005901,UniProtKB/Swiss-Prot:P77256,Genbank:NP_416285.1,EcoGene:EG13483,GeneID:946283;Name=NP_416285.1;gbkey=CDS;gene=ydjG;product=methylglyoxal reductase%2C NADH-dependent;protein_id=NP_416285.1;transl_table=11 NC_000913.3 RefSeq gene 1855981 1856928 . - . ID=gene1815;Dbxref=EcoGene:EG13484,GeneID:946285;Name=ydjH;gbkey=Gene;gene=ydjH;gene_biotype=protein_coding;gene_synonym=ECK1770,JW5289;locus_tag=b1772 NC_000913.3 RefSeq CDS 1855981 1856928 . - 0 ID=cds1760;Parent=gene1815;Dbxref=ASAP:ABE-0005903,UniProtKB/Swiss-Prot:P77493,Genbank:NP_416286.4,EcoGene:EG13484,GeneID:946285;Name=NP_416286.4;Note=putative kinase;gbkey=CDS;gene=ydjH;product=putative kinase;protein_id=NP_416286.4;transl_table=11 NC_000913.3 RefSeq gene 1856933 1857769 . - . ID=gene1816;Dbxref=EcoGene:EG13485,GeneID:946291;Name=ydjI;gbkey=Gene;gene=ydjI;gene_biotype=protein_coding;gene_synonym=ECK1771,JW1762;locus_tag=b1773 NC_000913.3 RefSeq CDS 1856933 1857769 . - 0 ID=cds1761;Parent=gene1816;Dbxref=ASAP:ABE-0005906,UniProtKB/Swiss-Prot:P77704,Genbank:NP_416287.1,EcoGene:EG13485,GeneID:946291;Name=NP_416287.1;Note=putative aldolase;gbkey=CDS;gene=ydjI;product=putative aldolase;protein_id=NP_416287.1;transl_table=11 NC_000913.3 RefSeq gene 1857790 1858833 . - . ID=gene1817;Dbxref=EcoGene:EG13486,GeneID:946292;Name=ydjJ;gbkey=Gene;gene=ydjJ;gene_biotype=protein_coding;gene_synonym=ECK1772,JW1763;locus_tag=b1774 NC_000913.3 RefSeq CDS 1857790 1858833 . - 0 ID=cds1762;Parent=gene1817;Dbxref=ASAP:ABE-0005908,UniProtKB/Swiss-Prot:P77280,Genbank:NP_416288.1,EcoGene:EG13486,GeneID:946292;Name=NP_416288.1;Note=putative oxidoreductase;gbkey=CDS;gene=ydjJ;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=NP_416288.1;transl_table=11 NC_000913.3 RefSeq gene 1858850 1860229 . - . ID=gene1818;Dbxref=EcoGene:EG13487,GeneID:946293;Name=ydjK;gbkey=Gene;gene=ydjK;gene_biotype=protein_coding;gene_synonym=ECK1773,JW5290;locus_tag=b1775 NC_000913.3 RefSeq CDS 1858850 1860229 . - 0 ID=cds1763;Parent=gene1818;Dbxref=ASAP:ABE-0005910,UniProtKB/Swiss-Prot:P76230,Genbank:NP_416289.1,EcoGene:EG13487,GeneID:946293;Name=NP_416289.1;Note=putative transport protein;gbkey=CDS;gene=ydjK;product=putative MFS sugar transporter%2C membrane protein;protein_id=NP_416289.1;transl_table=11 NC_000913.3 RefSeq gene 1860256 1861332 . - . ID=gene1819;Dbxref=EcoGene:EG13488,GeneID:946299;Name=ydjL;gbkey=Gene;gene=ydjL;gene_biotype=protein_coding;gene_synonym=ECK1774,JW1765;locus_tag=b1776 NC_000913.3 RefSeq CDS 1860256 1861332 . - 0 ID=cds1764;Parent=gene1819;Dbxref=ASAP:ABE-0005912,UniProtKB/Swiss-Prot:P77539,Genbank:NP_416290.1,EcoGene:EG13488,GeneID:946299;Name=NP_416290.1;gbkey=CDS;gene=ydjL;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=NP_416290.1;transl_table=11 NC_000913.3 RefSeq gene 1861702 1861974 . - . ID=gene1820;Dbxref=EcoGene:EG13489,GeneID:947074;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;gene_synonym=ECK1775,JW1766;locus_tag=b1777 NC_000913.3 RefSeq CDS 1861702 1861974 . - 0 ID=cds1765;Parent=gene1820;Dbxref=ASAP:ABE-0005914,UniProtKB/Swiss-Prot:P76231,Genbank:NP_416291.4,EcoGene:EG13489,GeneID:947074;Name=NP_416291.4;gbkey=CDS;gene=yeaC;product=DUF1315 family protein;protein_id=NP_416291.4;transl_table=11 NC_000913.3 RefSeq gene 1862016 1862429 . - . ID=gene1821;Dbxref=EcoGene:EG12394,GeneID:947188;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;gene_synonym=ECK1776,JW1767,yeaA;locus_tag=b1778 NC_000913.3 RefSeq CDS 1862016 1862429 . - 0 ID=cds1766;Parent=gene1821;Dbxref=ASAP:ABE-0005916,UniProtKB/Swiss-Prot:P0A746,Genbank:NP_416292.1,EcoGene:EG12394,GeneID:947188;Name=NP_416292.1;gbkey=CDS;gene=msrB;product=methionine sulfoxide reductase B;protein_id=NP_416292.1;transl_table=11 NC_000913.3 RefSeq gene 1862771 1863766 . + . ID=gene1822;Dbxref=EcoGene:EG10367,GeneID:947679;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;gene_synonym=ECK1777,JW1768;locus_tag=b1779 NC_000913.3 RefSeq CDS 1862771 1863766 . + 0 ID=cds1767;Parent=gene1822;Dbxref=ASAP:ABE-0005920,UniProtKB/Swiss-Prot:P0A9B2,Genbank:NP_416293.1,EcoGene:EG10367,GeneID:947679;Name=NP_416293.1;gbkey=CDS;gene=gapA;product=glyceraldehyde-3-phosphate dehydrogenase A;protein_id=NP_416293.1;transl_table=11 NC_000913.3 RefSeq gene 1863850 1864734 . + . ID=gene1823;Dbxref=EcoGene:EG12679,GeneID:946572;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;gene_synonym=ECK1778,JW1769,yzzQ;locus_tag=b1780 NC_000913.3 RefSeq CDS 1863850 1864734 . + 0 ID=cds1768;Parent=gene1823;Dbxref=ASAP:ABE-0005923,UniProtKB/Swiss-Prot:P39173,Genbank:NP_416294.4,EcoGene:EG12679,GeneID:946572;Name=NP_416294.4;gbkey=CDS;gene=yeaD;product=D-hexose-6-phosphate epimerase-like protein;protein_id=NP_416294.4;transl_table=11 NC_000913.3 RefSeq repeat_region 1864753 1864773 . + . ID=id220;Note=REP133 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1864782 1865636 . - . ID=gene1824;Dbxref=EcoGene:EG13491,GeneID:946302;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;gene_synonym=ECK1779,JW1770;locus_tag=b1781 NC_000913.3 RefSeq CDS 1864782 1865636 . - 0 ID=cds1769;Parent=gene1824;Dbxref=ASAP:ABE-0005925,UniProtKB/Swiss-Prot:P76234,Genbank:NP_416295.1,EcoGene:EG13491,GeneID:946302;Name=NP_416295.1;Note=putative an aldehyde reductase;gbkey=CDS;gene=yeaE;product=aldo-keto reductase%2C methylglyoxal to acetol%2C NADPH-dependent;protein_id=NP_416295.1;transl_table=11 NC_000913.3 RefSeq gene 1865726 1866472 . - . ID=gene1825;Dbxref=EcoGene:EG13492,GeneID:946301;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;gene_synonym=ECK1780,JW1771,yeaF;locus_tag=b1782 NC_000913.3 RefSeq CDS 1865726 1866472 . - 0 ID=cds1770;Parent=gene1825;Dbxref=ASAP:ABE-0005928,UniProtKB/Swiss-Prot:P0A908,Genbank:NP_416296.1,EcoGene:EG13492,GeneID:946301;Name=NP_416296.1;gbkey=CDS;gene=mipA;product=scaffolding protein for murein synthesizing machinery;protein_id=NP_416296.1;transl_table=11 NC_000913.3 RefSeq gene 1866908 1868842 . + . ID=gene1826;Dbxref=EcoGene:EG13493,GeneID:946297;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;gene_synonym=ECK1781,JW1772;locus_tag=b1783 NC_000913.3 RefSeq CDS 1866908 1868842 . + 0 ID=cds1771;Parent=gene1826;Dbxref=ASAP:ABE-0005935,UniProtKB/Swiss-Prot:P0ACY3,Genbank:NP_416297.1,EcoGene:EG13493,GeneID:946297;Name=NP_416297.1;gbkey=CDS;gene=yeaG;product=protein kinase%2C endogenous substrate unidentified%3B autokinase;protein_id=NP_416297.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1868892 1868930 . + . ID=id221;Note=REP134 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1868955 1870238 . + . ID=gene1827;Dbxref=EcoGene:EG13494,GeneID:946296;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;gene_synonym=ECK1782,JW1773;locus_tag=b1784 NC_000913.3 RefSeq CDS 1868955 1870238 . + 0 ID=cds1772;Parent=gene1827;Dbxref=ASAP:ABE-0005938,UniProtKB/Swiss-Prot:P76235,Genbank:NP_416298.1,EcoGene:EG13494,GeneID:946296;Name=NP_416298.1;gbkey=CDS;gene=yeaH;product=UPF0229 family protein;protein_id=NP_416298.1;transl_table=11 NC_000913.3 RefSeq gene 1870385 1871860 . + . ID=gene1828;Dbxref=EcoGene:EG13495,GeneID:946366;Name=yeaI;gbkey=Gene;gene=yeaI;gene_biotype=protein_coding;gene_synonym=ECK1783,JW1774;locus_tag=b1785 NC_000913.3 RefSeq CDS 1870385 1871860 . + 0 ID=cds1773;Parent=gene1828;Dbxref=ASAP:ABE-0005941,UniProtKB/Swiss-Prot:P76236,Genbank:NP_416299.1,EcoGene:EG13495,GeneID:946366;Name=NP_416299.1;gbkey=CDS;gene=yeaI;product=putative membrane-anchored diguanylate cyclase;protein_id=NP_416299.1;transl_table=11 NC_000913.3 RefSeq gene 1872041 1873531 . + . ID=gene1829;Dbxref=EcoGene:EG13496,GeneID:946290;Name=yeaJ;gbkey=Gene;gene=yeaJ;gene_biotype=protein_coding;gene_synonym=ECK1784,JW5291;locus_tag=b1786 NC_000913.3 RefSeq CDS 1872041 1873531 . + 0 ID=cds1774;Parent=gene1829;Dbxref=ASAP:ABE-0005943,UniProtKB/Swiss-Prot:P76237,Genbank:NP_416300.2,EcoGene:EG13496,GeneID:946290;Name=NP_416300.2;gbkey=CDS;gene=yeaJ;product=putative diguanylate cyclase;protein_id=NP_416300.2;transl_table=11 NC_000913.3 RefSeq gene 1873574 1874077 . + . ID=gene1830;Dbxref=EcoGene:EG13497,GeneID:946303;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;gene_synonym=ECK1785,JW1776;locus_tag=b1787 NC_000913.3 RefSeq CDS 1873574 1874077 . + 0 ID=cds1775;Parent=gene1830;Dbxref=ASAP:ABE-0005945,UniProtKB/Swiss-Prot:P64483,Genbank:NP_416301.1,EcoGene:EG13497,GeneID:946303;Name=NP_416301.1;gbkey=CDS;gene=yeaK;product=aminoacyl-tRNA editing domain protein;protein_id=NP_416301.1;transl_table=11 NC_000913.3 RefSeq gene 1874078 1874182 . - . ID=gene1831;Dbxref=EcoGene:EG14417,GeneID:946294;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;gene_synonym=ECK4472;locus_tag=b1788 NC_000913.3 RefSeq CDS 1874078 1874182 . - 0 ID=cds1776;Parent=gene1831;Dbxref=ASAP:ABE-0005947,UniProtKB/Swiss-Prot:P76239,Genbank:NP_416302.2,EcoGene:EG14417,GeneID:946294;Name=NP_416302.2;gbkey=CDS;gene=yoaI;product=uncharacterized protein;protein_id=NP_416302.2;transl_table=11 NC_000913.3 RefSeq gene 1874352 1874798 . + . ID=gene1832;Dbxref=EcoGene:EG13498,GeneID:946307;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;gene_synonym=ECK1787,JW1778;locus_tag=b1789 NC_000913.3 RefSeq CDS 1874352 1874798 . + 0 ID=cds1777;Parent=gene1832;Dbxref=ASAP:ABE-0005954,UniProtKB/Swiss-Prot:P0ACY6,Genbank:NP_416303.1,EcoGene:EG13498,GeneID:946307;Name=NP_416303.1;gbkey=CDS;gene=yeaL;product=UPF0756 family putative inner membrane protein;protein_id=NP_416303.1;transl_table=11 NC_000913.3 RefSeq gene 1874755 1875576 . - . ID=gene1833;Dbxref=EcoGene:EG13499,GeneID:946590;Name=yeaM;gbkey=Gene;gene=yeaM;gene_biotype=protein_coding;gene_synonym=ECK1788,JW1779;locus_tag=b1790 NC_000913.3 RefSeq CDS 1874755 1875576 . - 0 ID=cds1778;Parent=gene1833;Dbxref=ASAP:ABE-0005956,UniProtKB/Swiss-Prot:P76241,Genbank:NP_416304.1,EcoGene:EG13499,GeneID:946590;Name=NP_416304.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=yeaM;product=putative DNA-binding transcriptional regulator;protein_id=NP_416304.1;transl_table=11 NC_000913.3 RefSeq gene 1875673 1876854 . + . ID=gene1834;Dbxref=EcoGene:EG13500,GeneID:946309;Name=yeaN;gbkey=Gene;gene=yeaN;gene_biotype=protein_coding;gene_synonym=ECK1789,JW1780;locus_tag=b1791 NC_000913.3 RefSeq CDS 1875673 1876854 . + 0 ID=cds1779;Parent=gene1834;Dbxref=ASAP:ABE-0005962,UniProtKB/Swiss-Prot:P76242,Genbank:NP_416305.1,EcoGene:EG13500,GeneID:946309;Name=NP_416305.1;Note=putative amino acid/amine transport protein;gbkey=CDS;gene=yeaN;product=putative MFS transporter%2C inner membrane protein;protein_id=NP_416305.1;transl_table=11 NC_000913.3 RefSeq gene 1876909 1877256 . + . ID=gene1835;Dbxref=EcoGene:EG13501,GeneID:945675;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;gene_synonym=ECK1790,JW1781;locus_tag=b1792 NC_000913.3 RefSeq CDS 1876909 1877256 . + 0 ID=cds1780;Parent=gene1835;Dbxref=ASAP:ABE-0005964,UniProtKB/Swiss-Prot:P76243,Genbank:NP_416306.2,EcoGene:EG13501,GeneID:945675;Name=NP_416306.2;gbkey=CDS;gene=yeaO;product=DUF488 family protein;protein_id=NP_416306.2;transl_table=11 NC_000913.3 RefSeq gene 1877278 1877532 . - . ID=gene1836;Dbxref=EcoGene:EG14304,GeneID:946310;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;gene_synonym=ECK1791,JW1782;locus_tag=b1793 NC_000913.3 RefSeq CDS 1877278 1877532 . - 0 ID=cds1781;Parent=gene1836;Dbxref=ASAP:ABE-0005966,UniProtKB/Swiss-Prot:P64493,Genbank:NP_416307.1,EcoGene:EG14304,GeneID:946310;Name=NP_416307.1;gbkey=CDS;gene=yoaF;product=DUF333 family outer membrane lipoprotein;protein_id=NP_416307.1;transl_table=11 NC_000913.3 RefSeq gene 1877715 1878740 . + . ID=gene1837;Dbxref=EcoGene:EG13502,GeneID:948969;Name=yeaP;gbkey=Gene;gene=yeaP;gene_biotype=protein_coding;gene_synonym=ECK1792,JW5292;locus_tag=b1794 NC_000913.3 RefSeq CDS 1877715 1878740 . + 0 ID=cds1782;Parent=gene1837;Dbxref=ASAP:ABE-0005972,UniProtKB/Swiss-Prot:P76245,Genbank:NP_416308.4,EcoGene:EG13502,GeneID:948969;Name=NP_416308.4;gbkey=CDS;gene=yeaP;product=diguanylate cyclase;protein_id=NP_416308.4;transl_table=11 NC_000913.3 RefSeq gene 1878773 1878871 . + . ID=gene1838;Dbxref=EcoGene:EG14481,GeneID:7751647;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;gene_synonym=ECK4491;locus_tag=b4676 NC_000913.3 RefSeq CDS 1878773 1878871 . + 0 ID=cds1783;Parent=gene1838;Dbxref=UniProtKB/Swiss-Prot:C1P602,Genbank:YP_002791242.1,EcoGene:EG14481,GeneID:7751647;Name=YP_002791242.1;gbkey=CDS;gene=yoaK;product=inner membrane-associated protein;protein_id=YP_002791242.1;transl_table=11 NC_000913.3 RefSeq gene 1878874 1878948 . + . ID=gene1839;Dbxref=EcoGene:EG14480,GeneID:7751648;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;gene_synonym=ECK4490;locus_tag=b4675 NC_000913.3 RefSeq CDS 1878874 1878948 . + 0 ID=cds1784;Parent=gene1839;Dbxref=UniProtKB/Swiss-Prot:C1P603,Genbank:YP_002791243.1,EcoGene:EG14480,GeneID:7751648;Name=YP_002791243.1;gbkey=CDS;gene=yoaJ;product=inner membrane-associated protein;protein_id=YP_002791243.1;transl_table=11 NC_000913.3 RefSeq gene 1879007 1879255 . - . ID=gene1840;Dbxref=EcoGene:EG13503,GeneID:946311;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;gene_synonym=ECK1793,JW1784;locus_tag=b1795 NC_000913.3 RefSeq CDS 1879007 1879255 . - 0 ID=cds1785;Parent=gene1840;Dbxref=ASAP:ABE-0005974,UniProtKB/Swiss-Prot:P64485,Genbank:NP_416309.1,EcoGene:EG13503,GeneID:946311;Name=NP_416309.1;gbkey=CDS;gene=yeaQ;product=UPF0410 family protein;protein_id=NP_416309.1;transl_table=11 NC_000913.3 RefSeq gene 1879403 1879585 . - . ID=gene1841;Dbxref=EcoGene:EG14305,GeneID:946314;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;gene_synonym=ECK1794,JW1785;locus_tag=b1796 NC_000913.3 RefSeq CDS 1879403 1879585 . - 0 ID=cds1786;Parent=gene1841;Dbxref=ASAP:ABE-0005976,UniProtKB/Swiss-Prot:P64496,Genbank:NP_416310.1,EcoGene:EG14305,GeneID:946314;Name=NP_416310.1;gbkey=CDS;gene=yoaG;product=uncharacterized protein;protein_id=NP_416310.1;transl_table=11 NC_000913.3 RefSeq gene 1879589 1879948 . - . ID=gene1842;Dbxref=EcoGene:EG13504,GeneID:946317;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;gene_synonym=ECK1795,JW1786;locus_tag=b1797 NC_000913.3 RefSeq CDS 1879589 1879948 . - 0 ID=cds1787;Parent=gene1842;Dbxref=ASAP:ABE-0005979,UniProtKB/Swiss-Prot:P64488,Genbank:NP_416311.1,EcoGene:EG13504,GeneID:946317;Name=NP_416311.1;gbkey=CDS;gene=yeaR;product=DUF1971 family protein%2C nitrate-inducible;protein_id=NP_416311.1;transl_table=11 NC_000913.3 RefSeq gene 1880121 1880759 . - . ID=gene1843;Dbxref=EcoGene:EG13505,GeneID:946157;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;gene_synonym=ECK1796,JW1787,yeaS;locus_tag=b1798 NC_000913.3 RefSeq CDS 1880121 1880759 . - 0 ID=cds1788;Parent=gene1843;Dbxref=ASAP:ABE-0005984,UniProtKB/Swiss-Prot:P76249,Genbank:NP_416312.1,EcoGene:EG13505,GeneID:946157;Name=NP_416312.1;gbkey=CDS;gene=leuE;product=leucine efflux protein;protein_id=NP_416312.1;transl_table=11 NC_000913.3 RefSeq gene 1880886 1881809 . - . ID=gene1844;Dbxref=EcoGene:EG13506,GeneID:946316;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;gene_synonym=ECK1797,JW1788,yeaT;locus_tag=b1799 NC_000913.3 RefSeq CDS 1880886 1881809 . - 0 ID=cds1789;Parent=gene1844;Dbxref=ASAP:ABE-0005987,UniProtKB/Swiss-Prot:P76250,Genbank:NP_416313.4,EcoGene:EG13506,GeneID:946316;Name=NP_416313.4;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=dmlR;product=transcriptional activator of dmlA;protein_id=NP_416313.4;transl_table=11 NC_000913.3 RefSeq gene 1881912 1882997 . + . ID=gene1845;Dbxref=EcoGene:EG13507,GeneID:946319;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;gene_synonym=ECK1798,JW1789,yeaU;locus_tag=b1800 NC_000913.3 RefSeq CDS 1881912 1882997 . + 0 ID=cds1790;Parent=gene1845;Dbxref=ASAP:ABE-0005991,UniProtKB/Swiss-Prot:P76251,Genbank:NP_416314.1,EcoGene:EG13507,GeneID:946319;Name=NP_416314.1;Note=putative tartrate dehydrogenase;gbkey=CDS;gene=dmlA;product=D-malate oxidase%2C NAD-dependent%3B putative tartrate dehydrogenase;protein_id=NP_416314.1;transl_table=11 NC_000913.3 RefSeq gene 1883188 1884633 . + . ID=gene1846;Dbxref=EcoGene:EG13508,GeneID:947326;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=protein_coding;gene_synonym=ECK1799,JW5293;locus_tag=b1801 NC_000913.3 RefSeq CDS 1883188 1884633 . + 0 ID=cds1791;Parent=gene1846;Dbxref=ASAP:ABE-0005995,UniProtKB/Swiss-Prot:P0ABD1,Genbank:NP_416315.1,EcoGene:EG13508,GeneID:947326;Name=NP_416315.1;Note=putative transport protein;gbkey=CDS;gene=yeaV;product=putative transporter;protein_id=NP_416315.1;transl_table=11 NC_000913.3 RefSeq gene 1884665 1885789 . + . ID=gene1847;Dbxref=EcoGene:EG13509,GeneID:946325;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;gene_synonym=ECK1800,JW5294;locus_tag=b1802 NC_000913.3 RefSeq CDS 1884665 1885789 . + 0 ID=cds1792;Parent=gene1847;Dbxref=ASAP:ABE-0005997,UniProtKB/Swiss-Prot:P0ABR7,Genbank:NP_416316.1,EcoGene:EG13509,GeneID:946325;Name=NP_416316.1;gbkey=CDS;gene=yeaW;product=putative YeaWX dioxygenase alpha subunit%3B 2Fe-2S cluster;protein_id=NP_416316.1;transl_table=11 NC_000913.3 RefSeq gene 1885845 1886810 . + . ID=gene1848;Dbxref=EcoGene:EG13510,GeneID:946329;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;gene_synonym=ECK1801,JW1792;locus_tag=b1803 NC_000913.3 RefSeq CDS 1885845 1886810 . + 0 ID=cds1793;Parent=gene1848;Dbxref=ASAP:ABE-0006000,UniProtKB/Swiss-Prot:P76254,Genbank:NP_416317.1,EcoGene:EG13510,GeneID:946329;Name=NP_416317.1;Note=putative diogenase beta subunit;gbkey=CDS;gene=yeaX;product=putative YeaWX dioxygenase beta subunit%2C reductase component;protein_id=NP_416317.1;transl_table=11 NC_000913.3 RefSeq gene 1886864 1887991 . - . ID=gene1849;Dbxref=EcoGene:EG10858,GeneID:946328;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;gene_synonym=ECK1802,JW1793;locus_tag=b1804 NC_000913.3 RefSeq CDS 1886864 1887991 . - 0 ID=cds1794;Parent=gene1849;Dbxref=ASAP:ABE-0006003,UniProtKB/Swiss-Prot:P09155,Genbank:NP_416318.1,EcoGene:EG10858,GeneID:946328;Name=NP_416318.1;Note=RNase D%2C processes tRNA precursor;gbkey=CDS;gene=rnd;product=ribonuclease D;protein_id=NP_416318.1;transl_table=11 NC_000913.3 RefSeq gene 1888061 1889746 . - . ID=gene1850;Dbxref=EcoGene:EG11530,GeneID:946327;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;gene_synonym=ECK1803,JW1794,oldD;locus_tag=b1805 NC_000913.3 RefSeq CDS 1888061 1889746 . - 0 ID=cds1795;Parent=gene1850;Dbxref=ASAP:ABE-0006005,UniProtKB/Swiss-Prot:P69451,Genbank:NP_416319.1,EcoGene:EG11530,GeneID:946327;Name=NP_416319.1;gbkey=CDS;gene=fadD;product=acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase);protein_id=NP_416319.1;transl_table=11 NC_000913.3 RefSeq gene 1889951 1890532 . - . ID=gene1851;Dbxref=EcoGene:EG13511,GeneID:946312;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;gene_synonym=ECK1804,JW1795;locus_tag=b1806 NC_000913.3 RefSeq CDS 1889951 1890532 . - 0 ID=cds1796;Parent=gene1851;Dbxref=ASAP:ABE-0006011,UniProtKB/Swiss-Prot:P0AA91,Genbank:NP_416320.1,EcoGene:EG13511,GeneID:946312;Name=NP_416320.1;Note=putative outer membrane protein;gbkey=CDS;gene=yeaY;product=Slp family lipoprotein%2C RpoE-regulated;protein_id=NP_416320.1;transl_table=11 NC_000913.3 RefSeq gene 1890572 1891267 . - . ID=gene1852;Dbxref=EcoGene:EG13512,GeneID:946304;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;gene_synonym=ECK1805,JW1796,rpf,yeaZ;locus_tag=b1807 NC_000913.3 RefSeq CDS 1890572 1891267 . - 0 ID=cds1797;Parent=gene1852;Dbxref=ASAP:ABE-0006013,UniProtKB/Swiss-Prot:P76256,Genbank:NP_416321.1,EcoGene:EG13512,GeneID:946304;Name=NP_416321.1;gbkey=CDS;gene=tsaB;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%3B binding partner and protease for TsaD;protein_id=NP_416321.1;transl_table=11 NC_000913.3 RefSeq gene 1891325 1893235 . - . ID=gene1853;Dbxref=EcoGene:EG13513,GeneID:946305;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;gene_synonym=ECK1806,JW1797;locus_tag=b1808 NC_000913.3 RefSeq CDS 1891325 1893235 . - 0 ID=cds1798;Parent=gene1853;Dbxref=ASAP:ABE-0006016,UniProtKB/Swiss-Prot:P76257,Genbank:NP_416322.1,EcoGene:EG13513,GeneID:946305;Name=NP_416322.1;Note=putative enzyme;gbkey=CDS;gene=yoaA;product=putative ATP-dependent helicase%2C DinG family;protein_id=NP_416322.1;transl_table=11 NC_000913.3 RefSeq gene 1893367 1893711 . + . ID=gene1854;Dbxref=EcoGene:EG13514,GeneID:946357;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;gene_synonym=ECK1807,JW5295;locus_tag=b1809 NC_000913.3 RefSeq CDS 1893367 1893711 . + 0 ID=cds1799;Parent=gene1854;Dbxref=ASAP:ABE-0006020,UniProtKB/Swiss-Prot:P0AEB7,Genbank:NP_416323.4,EcoGene:EG13514,GeneID:946357;Name=NP_416323.4;gbkey=CDS;gene=yoaB;product=putative reactive intermediate deaminase;protein_id=NP_416323.4;transl_table=11 NC_000913.3 RefSeq gene 1894133 1894432 . + . ID=gene1855;Dbxref=EcoGene:EG13515,GeneID:946308;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=protein_coding;gene_synonym=ECK1808,JW5296;locus_tag=b1810 NC_000913.3 RefSeq CDS 1894133 1894432 . + 0 ID=cds1800;Parent=gene1855;Dbxref=ASAP:ABE-0006024,UniProtKB/Swiss-Prot:P64490,Genbank:NP_416324.2,EcoGene:EG13515,GeneID:946308;Name=NP_416324.2;gbkey=CDS;gene=yoaC;product=DUF1889 family protein;protein_id=NP_416324.2;transl_table=11 NC_000913.3 RefSeq gene 1894552 1894731 . - . ID=gene1856;Dbxref=EcoGene:EG14306,GeneID:946346;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;gene_synonym=ECK1809,JW1800;locus_tag=b1811 NC_000913.3 RefSeq CDS 1894552 1894731 . - 0 ID=cds1801;Parent=gene1856;Dbxref=ASAP:ABE-0006026,UniProtKB/Swiss-Prot:P67338,Genbank:NP_416325.1,EcoGene:EG14306,GeneID:946346;Name=NP_416325.1;gbkey=CDS;gene=yoaH;product=UPF0181 family protein;protein_id=NP_416325.1;transl_table=11 NC_000913.3 RefSeq gene 1894805 1896166 . + . ID=gene1857;Dbxref=EcoGene:EG10683,GeneID:946337;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;gene_synonym=ECK1810,JW1801;locus_tag=b1812 NC_000913.3 RefSeq CDS 1894805 1896166 . + 0 ID=cds1802;Parent=gene1857;Dbxref=ASAP:ABE-0006031,UniProtKB/Swiss-Prot:P05041,Genbank:NP_416326.1,EcoGene:EG10683,GeneID:946337;Name=NP_416326.1;Note=p-aminobenzoate synthetase%2C component I;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase%2C subunit I;protein_id=NP_416326.1;transl_table=11 NC_000913.3 RefSeq gene 1896170 1896748 . + . ID=gene1858;Dbxref=EcoGene:EG12693,GeneID:946330;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;gene_synonym=ECK1811,JW1802,yeaB;locus_tag=b1813 NC_000913.3 RefSeq CDS 1896170 1896748 . + 0 ID=cds1803;Parent=gene1858;Dbxref=ASAP:ABE-0006035,UniProtKB/Swiss-Prot:P43337,Genbank:NP_416327.1,EcoGene:EG12693,GeneID:946330;Name=NP_416327.1;gbkey=CDS;gene=nudL;product=putative CoA pyrophosphohydrolase%2C weak 3-phosphohydroxypyruvate phosphatase;protein_id=NP_416327.1;transl_table=11 NC_000913.3 RefSeq gene 1896932 1898296 . + . ID=gene1859;Dbxref=EcoGene:EG10930,GeneID:946331;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;gene_synonym=ECK1812,JW1803;locus_tag=b1814 NC_000913.3 RefSeq CDS 1896932 1898296 . + 0 ID=cds1804;Parent=gene1859;Dbxref=ASAP:ABE-0006039,UniProtKB/Swiss-Prot:P16095,Genbank:NP_416328.1,EcoGene:EG10930,GeneID:946331;Name=NP_416328.1;Note=L-serine deaminase;gbkey=CDS;gene=sdaA;product=L-serine dehydratase 1;protein_id=NP_416328.1;transl_table=11 NC_000913.3 RefSeq gene 1898427 1900025 . + . ID=gene1860;Dbxref=EcoGene:EG13516,GeneID:946336;Name=yoaD;gbkey=Gene;gene=yoaD;gene_biotype=protein_coding;gene_synonym=adrB,ECK1813,JW1804;locus_tag=b1815 NC_000913.3 RefSeq CDS 1898427 1900025 . + 0 ID=cds1805;Parent=gene1860;Dbxref=ASAP:ABE-0006043,UniProtKB/Swiss-Prot:P76261,Genbank:NP_416329.4,EcoGene:EG13516,GeneID:946336;Name=NP_416329.4;gbkey=CDS;gene=yoaD;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase%2C regulator of cellulose production;protein_id=NP_416329.4;transl_table=11 NC_000913.3 RefSeq gene 1900029 1901585 . - . ID=gene1861;Dbxref=EcoGene:EG13517,GeneID:946335;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;gene_synonym=borG,ECK1814,JW1805;locus_tag=b1816 NC_000913.3 RefSeq CDS 1900029 1901585 . - 0 ID=cds1806;Parent=gene1861;Dbxref=ASAP:ABE-0006045,UniProtKB/Swiss-Prot:P0AEC0,Genbank:NP_416330.1,EcoGene:EG13517,GeneID:946335;Name=NP_416330.1;Note=putative transport protein;gbkey=CDS;gene=yoaE;product=putative membrane protein/conserved protein;protein_id=NP_416330.1;transl_table=11 NC_000913.3 RefSeq gene 1902048 1903019 . + . ID=gene1862;Dbxref=EcoGene:EG10567,GeneID:946334;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;gene_synonym=ECK1815,gptB,JW1806,mpt,ptsL,ptsX;locus_tag=b1817 NC_000913.3 RefSeq CDS 1902048 1903019 . + 0 ID=cds1807;Parent=gene1862;Dbxref=ASAP:ABE-0006054,UniProtKB/Swiss-Prot:P69797,Genbank:NP_416331.1,EcoGene:EG10567,GeneID:946334;Name=NP_416331.1;Note=PTS enzyme IIAB%2C mannose-specific;gbkey=CDS;gene=manX;product=fused mannose-specific PTS enzymes: IIA component/IIB component;protein_id=NP_416331.1;transl_table=11 NC_000913.3 RefSeq gene 1903082 1903882 . + . ID=gene1863;Dbxref=EcoGene:EG10568,GeneID:946332;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;gene_synonym=ECK1816,JW1807,pel,ptsP,ptsX;locus_tag=b1818 NC_000913.3 RefSeq CDS 1903082 1903882 . + 0 ID=cds1808;Parent=gene1863;Dbxref=ASAP:ABE-0006056,UniProtKB/Swiss-Prot:P69801,Genbank:NP_416332.1,EcoGene:EG10568,GeneID:946332;Name=NP_416332.1;Note=PTS enzyme IIC%2C mannose-specific;gbkey=CDS;gene=manY;product=mannose-specific enzyme IIC component of PTS;protein_id=NP_416332.1;transl_table=11 NC_000913.3 RefSeq gene 1903895 1904746 . + . ID=gene1864;Dbxref=EcoGene:EG10569,GeneID:946342;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;gene_synonym=ECK1817,gptB,JW1808,mpt,ptsM,ptsX;locus_tag=b1819 NC_000913.3 RefSeq CDS 1903895 1904746 . + 0 ID=cds1809;Parent=gene1864;Dbxref=ASAP:ABE-0006058,UniProtKB/Swiss-Prot:P69805,Genbank:NP_416333.4,EcoGene:EG10569,GeneID:946342;Name=NP_416333.4;Note=PTS enzyme IID%2C mannose-specific;gbkey=CDS;gene=manZ;product=mannose-specific enzyme IID component of PTS;protein_id=NP_416333.4;transl_table=11 NC_000913.3 RefSeq gene 1904801 1905259 . + . ID=gene1865;Dbxref=EcoGene:EG13948,GeneID:946343;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;gene_synonym=ECK1818,JW1809;locus_tag=b1820 NC_000913.3 RefSeq CDS 1904801 1905259 . + 0 ID=cds1810;Parent=gene1865;Dbxref=ASAP:ABE-0006062,UniProtKB/Swiss-Prot:P67601,Genbank:NP_416334.1,EcoGene:EG13948,GeneID:946343;Name=NP_416334.1;gbkey=CDS;gene=yobD;product=UPF0266 family inner membrane protein;protein_id=NP_416334.1;transl_table=11 NC_000913.3 RefSeq gene 1905688 1906254 . + . ID=gene1866;Dbxref=EcoGene:EG14012,GeneID:946341;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;gene_synonym=ECK1819,JW5830,yebN;locus_tag=b1821 NC_000913.3 RefSeq CDS 1905688 1906254 . + 0 ID=cds1811;Parent=gene1866;Dbxref=ASAP:ABE-0006065,UniProtKB/Swiss-Prot:P76264,Genbank:NP_416335.4,EcoGene:EG14012,GeneID:946341;Name=NP_416335.4;gbkey=CDS;gene=mntP;product=putative Mn(2+) efflux pump%2C mntR-regulated;protein_id=NP_416335.4;transl_table=11 NC_000913.3 RefSeq gene 1906251 1907060 . - . ID=gene1867;Dbxref=EcoGene:EG12207,GeneID:946340;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;gene_synonym=ECK1820,JW1811,rrmA,yebH;locus_tag=b1822 NC_000913.3 RefSeq CDS 1906251 1907060 . - 0 ID=cds1812;Parent=gene1867;Dbxref=ASAP:ABE-0006067,UniProtKB/Swiss-Prot:P36999,Genbank:NP_416336.1,EcoGene:EG12207,GeneID:946340;Name=NP_416336.1;gbkey=CDS;gene=rlmA;product=23S rRNA m(1)G745 methyltransferase%2C SAM-dependent;protein_id=NP_416336.1;transl_table=11 NC_000913.3 RefSeq gene 1907226 1907435 . - . ID=gene1868;Dbxref=EcoGene:EG12204,GeneID:946339;Name=cspC;gbkey=Gene;gene=cspC;gene_biotype=protein_coding;gene_synonym=ECK1821,JW1812,msmB;locus_tag=b1823 NC_000913.3 RefSeq CDS 1907226 1907435 . - 0 ID=cds1813;Parent=gene1868;Dbxref=ASAP:ABE-0006070,UniProtKB/Swiss-Prot:P0A9Y6,Genbank:NP_416337.1,EcoGene:EG12204,GeneID:946339;Name=NP_416337.1;Note=cold shock protein;gbkey=CDS;gene=cspC;product=stress protein%2C member of the CspA-family;protein_id=NP_416337.1;transl_table=11 NC_000913.3 RefSeq gene 1907448 1907591 . - . ID=gene1869;Dbxref=EcoGene:EG14382,GeneID:946338;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;gene_synonym=ECK1822,JW1813;locus_tag=b1824 NC_000913.3 RefSeq CDS 1907448 1907591 . - 0 ID=cds1814;Parent=gene1869;Dbxref=ASAP:ABE-0006072,UniProtKB/Swiss-Prot:P64508,Genbank:NP_416338.1,EcoGene:EG14382,GeneID:946338;Name=NP_416338.1;gbkey=CDS;gene=yobF;product=DUF2527 family heat-induced protein;protein_id=NP_416338.1;transl_table=11 NC_000913.3 RefSeq gene 1908261 1908548 . - . ID=gene1870;Dbxref=EcoGene:EG14014,GeneID:946350;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;gene_synonym=ECK1823,JW1814;locus_tag=b1825 NC_000913.3 RefSeq CDS 1908261 1908548 . - 0 ID=cds1815;Parent=gene1870;Dbxref=ASAP:ABE-0006075,UniProtKB/Swiss-Prot:P64499,Genbank:NP_416339.1,EcoGene:EG14014,GeneID:946350;Name=NP_416339.1;gbkey=CDS;gene=yebO;product=putative inner membrane protein;protein_id=NP_416339.1;transl_table=11 NC_000913.3 RefSeq gene 1908623 1908766 . - . ID=gene1871;Dbxref=EcoGene:EG14383,GeneID:946351;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;gene_synonym=ECK1824,JW1815,yobG;locus_tag=b1826 NC_000913.3 RefSeq CDS 1908623 1908766 . - 0 ID=cds1816;Parent=gene1871;Dbxref=ASAP:ABE-0006078,UniProtKB/Swiss-Prot:P64512,Genbank:NP_416340.1,EcoGene:EG14383,GeneID:946351;Name=NP_416340.1;gbkey=CDS;gene=mgrB;product=regulatory peptide for PhoPQ%2C feedback inhibition;protein_id=NP_416340.1;transl_table=11 NC_000913.3 RefSeq gene 1908925 1909164 . + . ID=gene1872;Dbxref=EcoGene:EG14424,GeneID:1450271;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;gene_synonym=ECK1825,JW5298;locus_tag=b4536 NC_000913.3 RefSeq CDS 1908925 1909164 . + 0 ID=cds1817;Parent=gene1872;Dbxref=ASAP:ABE-0285057,UniProtKB/Swiss-Prot:Q2MB16,Genbank:YP_588456.1,EcoGene:EG14424,GeneID:1450271;Name=YP_588456.1;gbkey=CDS;gene=yobH;product=uncharacterized protein;protein_id=YP_588456.1;transl_table=11 NC_000913.3 RefSeq gene 1909308 1910099 . - . ID=gene1873;Dbxref=EcoGene:EG14018,GeneID:946129;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;gene_synonym=ECK1826,JW1816,yebP;locus_tag=b1827 NC_000913.3 RefSeq CDS 1909308 1910099 . - 0 ID=cds1818;Parent=gene1873;Dbxref=ASAP:ABE-0006081,UniProtKB/Swiss-Prot:P76268,Genbank:NP_416341.1,EcoGene:EG14018,GeneID:946129;Name=NP_416341.1;gbkey=CDS;gene=kdgR;product=KDG regulon transcriptional repressor;protein_id=NP_416341.1;transl_table=11 NC_000913.3 RefSeq gene 1910276 1911649 . + . ID=gene1874;Dbxref=EcoGene:EG14019,GeneID:946048;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;gene_synonym=ECK1827,JW5299;locus_tag=b1828 NC_000913.3 RefSeq CDS 1910276 1911649 . + 0 ID=cds1819;Parent=gene1874;Dbxref=ASAP:ABE-0006085,UniProtKB/Swiss-Prot:P76269,Genbank:NP_416342.4,EcoGene:EG14019,GeneID:946048;Name=NP_416342.4;Note=putative transport protein;gbkey=CDS;gene=yebQ;product=putative transporter;protein_id=NP_416342.4;transl_table=11 NC_000913.3 RefSeq gene 1911695 1912576 . - . ID=gene1875;Dbxref=EcoGene:EG10462,GeneID:946076;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;gene_synonym=ECK1828,JW1818;locus_tag=b1829 NC_000913.3 RefSeq CDS 1911695 1912576 . - 0 ID=cds1820;Parent=gene1875;Dbxref=ASAP:ABE-0006087,UniProtKB/Swiss-Prot:P23894,Genbank:NP_416343.1,EcoGene:EG10462,GeneID:946076;Name=NP_416343.1;Note=heat shock protein%2C integral membrane protein;gbkey=CDS;gene=htpX;product=putative endopeptidase;protein_id=NP_416343.1;transl_table=11 NC_000913.3 RefSeq gene 1912768 1914816 . - . ID=gene1876;Dbxref=EcoGene:EG10760,GeneID:946096;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=ECK1829,JW1819,tsp;locus_tag=b1830 NC_000913.3 RefSeq CDS 1912768 1914816 . - 0 ID=cds1821;Parent=gene1876;Dbxref=ASAP:ABE-0006090,UniProtKB/Swiss-Prot:P23865,Genbank:NP_416344.1,EcoGene:EG10760,GeneID:946096;Name=NP_416344.1;gbkey=CDS;gene=prc;product=carboxy-terminal protease for penicillin-binding protein 3;protein_id=NP_416344.1;transl_table=11 NC_000913.3 RefSeq gene 1914836 1915534 . - . ID=gene1877;Dbxref=EcoGene:EG12866,GeneID:948950;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;gene_synonym=ECK1830,JW5300,yebJ,yobE,yoeC;locus_tag=b1831 NC_000913.3 RefSeq CDS 1914836 1915534 . - 0 ID=cds1822;Parent=gene1877;Dbxref=ASAP:ABE-0006092,UniProtKB/Swiss-Prot:P45577,Genbank:YP_026161.1,EcoGene:EG12866,GeneID:948950;Name=YP_026161.1;Note=regulator of ProP~putative structural element which influences activation of ProP;gbkey=CDS;gene=proQ;product=RNA chaperone%2C putative ProP translation regulator;protein_id=YP_026161.1;transl_table=11 NC_000913.3 RefSeq gene 1915631 1916128 . - . ID=gene1878;Dbxref=EcoGene:EG14020,GeneID:946086;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;gene_synonym=ECK1831,JW1821,yebR;locus_tag=b1832 NC_000913.3 RefSeq CDS 1915631 1916128 . - 0 ID=cds1823;Parent=gene1878;Dbxref=ASAP:ABE-0006095,UniProtKB/Swiss-Prot:P76270,Genbank:NP_416346.4,EcoGene:EG14020,GeneID:946086;Name=NP_416346.4;gbkey=CDS;gene=msrC;product=free methionine-(R)-sulfoxide reductase;protein_id=NP_416346.4;transl_table=11 NC_000913.3 RefSeq gene 1916258 1917541 . + . ID=gene1879;Dbxref=EcoGene:EG14021,GeneID:946353;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;gene_synonym=ECK1832,JW1822;locus_tag=b1833 NC_000913.3 RefSeq CDS 1916258 1917541 . + 0 ID=cds1824;Parent=gene1879;Dbxref=ASAP:ABE-0006098,UniProtKB/Swiss-Prot:P0AD03,Genbank:NP_416347.1,EcoGene:EG14021,GeneID:946353;Name=NP_416347.1;gbkey=CDS;gene=yebS;product=inner membrane PqiA domain protein;protein_id=NP_416347.1;transl_table=11 NC_000913.3 RefSeq gene 1917510 1920143 . + . ID=gene1880;Dbxref=EcoGene:EG14022,GeneID:946352;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;gene_synonym=ECK1833,JW1823;locus_tag=b1834 NC_000913.3 RefSeq CDS 1917510 1920143 . + 0 ID=cds1825;Parent=gene1880;Dbxref=ASAP:ABE-0006101,UniProtKB/Swiss-Prot:P76272,Genbank:NP_416348.2,EcoGene:EG14022,GeneID:946352;Name=NP_416348.2;gbkey=CDS;gene=yebT;product=MCE domain protein;protein_id=NP_416348.2;transl_table=11 NC_000913.3 RefSeq gene 1920223 1921662 . + . ID=gene1881;Dbxref=EcoGene:EG14023,GeneID:946348;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;gene_synonym=ECK1834,JW5301,yebU;locus_tag=b1835 NC_000913.3 RefSeq CDS 1920223 1921662 . + 0 ID=cds1826;Parent=gene1881;Dbxref=ASAP:ABE-0006106,UniProtKB/Swiss-Prot:P76273,Genbank:NP_416349.2,EcoGene:EG14023,GeneID:946348;Name=NP_416349.2;gbkey=CDS;gene=rsmF;product=16S rRNA m(5)C1407 methyltransferase%2C SAM-dependent;protein_id=NP_416349.2;transl_table=11 NC_000913.3 RefSeq gene 1921780 1922016 . + . ID=gene1882;Dbxref=EcoGene:EG14024,GeneID:946347;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;gene_synonym=ECK1835,JW5302;locus_tag=b1836 NC_000913.3 RefSeq CDS 1921780 1922016 . + 0 ID=cds1827;Parent=gene1882;Dbxref=ASAP:ABE-0006110,UniProtKB/Swiss-Prot:P64503,Genbank:NP_416350.4,EcoGene:EG14024,GeneID:946347;Name=NP_416350.4;gbkey=CDS;gene=yebV;product=uncharacterized protein;protein_id=NP_416350.4;transl_table=11 NC_000913.3 RefSeq gene 1922121 1922312 . + . ID=gene1883;Dbxref=EcoGene:EG14025,GeneID:946354;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;gene_synonym=ECK1836,JW5303;locus_tag=b1837 NC_000913.3 RefSeq CDS 1922121 1922312 . + 0 ID=cds1828;Parent=gene1883;Dbxref=ASAP:ABE-0006112,UniProtKB/Swiss-Prot:P76275,Genbank:NP_416351.2,EcoGene:EG14025,GeneID:946354;Name=NP_416351.2;gbkey=CDS;gene=yebW;product=uncharacterized protein;protein_id=NP_416351.2;transl_table=11 NC_000913.3 RefSeq gene 1922313 1922969 . - . ID=gene1884;Dbxref=EcoGene:EG14026,GeneID:946356;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;gene_synonym=ECK1837,JW1827,prpA,yebX;locus_tag=b1838 NC_000913.3 RefSeq CDS 1922313 1922969 . - 0 ID=cds1829;Parent=gene1884;Dbxref=ASAP:ABE-0006114,UniProtKB/Swiss-Prot:P55798,Genbank:NP_416352.4,EcoGene:EG14026,GeneID:946356;Name=NP_416352.4;gbkey=CDS;gene=pphA;product=serine/threonine-specific protein phosphatase 1;protein_id=NP_416352.4;transl_table=11 NC_000913.3 RefSeq gene 1923066 1923314 . + . ID=gene1885;Dbxref=EcoGene:EG31146,GeneID:2847771;Name=ryeA;gbkey=Gene;gene=ryeA;gene_biotype=ncRNA;gene_synonym=ECK1838,IS091,JWR0237,psrA8,sraC,tpke79;locus_tag=b4432 NC_000913.3 RefSeq ncRNA 1923066 1923314 . + . ID=rna54;Parent=gene1885;Dbxref=ASAP:ABE-0047252,EcoGene:EG31146,GeneID:2847771;Note=identified in a large scale screen;gbkey=ncRNA;gene=ryeA;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 1923066 1923314 . + . ID=id222;Parent=rna54;Dbxref=ASAP:ABE-0047252,EcoGene:EG31146,GeneID:2847771;Note=identified in a large scale screen;gbkey=ncRNA;gene=ryeA;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 1923164 1923284 . - . ID=gene1886;Dbxref=EcoGene:EG31147,GeneID:2847772;Name=sdsR;gbkey=Gene;gene=sdsR;gene_biotype=ncRNA;gene_synonym=ECK1839,JWR0238,ryeB,tpke79;locus_tag=b4433 NC_000913.3 RefSeq ncRNA 1923164 1923284 . - . ID=rna55;Parent=gene1886;Dbxref=ASAP:ABE-0047253,EcoGene:EG31147,GeneID:2847772;Note=identified in a large scale screen;gbkey=ncRNA;gene=sdsR;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 1923164 1923284 . - . ID=id223;Parent=rna55;Dbxref=ASAP:ABE-0047253,EcoGene:EG31147,GeneID:2847772;Note=identified in a large scale screen;gbkey=ncRNA;gene=sdsR;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 1923365 1923706 . - . ID=gene1887;Dbxref=EcoGene:EG14027,GeneID:947014;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;gene_synonym=ECK1840,JW1828;locus_tag=b1839 NC_000913.3 RefSeq CDS 1923365 1923706 . - 0 ID=cds1830;Parent=gene1887;Dbxref=ASAP:ABE-0006118,UniProtKB/Swiss-Prot:P64506,Genbank:NP_416353.1,EcoGene:EG14027,GeneID:947014;Name=NP_416353.1;gbkey=CDS;gene=yebY;product=DUF2511 family protein;protein_id=NP_416353.1;transl_table=11 NC_000913.3 RefSeq gene 1923719 1924591 . - . ID=gene1888;Dbxref=EcoGene:EG14028,GeneID:947078;Name=yebZ;gbkey=Gene;gene=yebZ;gene_biotype=protein_coding;gene_synonym=ECK1841,JW1829;locus_tag=b1840 NC_000913.3 RefSeq CDS 1923719 1924591 . - 0 ID=cds1831;Parent=gene1888;Dbxref=ASAP:ABE-0006120,UniProtKB/Swiss-Prot:P76278,Genbank:NP_416354.1,EcoGene:EG14028,GeneID:947078;Name=NP_416354.1;Note=putative resistance protein;gbkey=CDS;gene=yebZ;product=inner membrane protein;protein_id=NP_416354.1;transl_table=11 NC_000913.3 RefSeq gene 1924595 1924969 . - . ID=gene1889;Dbxref=EcoGene:EG14029,GeneID:948315;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;gene_synonym=ECK1842,JW1830;locus_tag=b1841 NC_000913.3 RefSeq CDS 1924595 1924969 . - 0 ID=cds1832;Parent=gene1889;Dbxref=ASAP:ABE-0006123,UniProtKB/Swiss-Prot:P0AA57,Genbank:NP_416355.1,EcoGene:EG14029,GeneID:948315;Name=NP_416355.1;gbkey=CDS;gene=yobA;product=CopC family protein;protein_id=NP_416355.1;transl_table=11 NC_000913.3 RefSeq gene 1925108 1925338 . + . ID=gene1890;Dbxref=EcoGene:EG11505,GeneID:947471;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;gene_synonym=ECK1843,JW1831;locus_tag=b1842 NC_000913.3 RefSeq CDS 1925108 1925338 . + 0 ID=cds1833;Parent=gene1890;Dbxref=ASAP:ABE-0006126,UniProtKB/Swiss-Prot:P0ABS8,Genbank:NP_416356.1,EcoGene:EG11505,GeneID:947471;Name=NP_416356.1;gbkey=CDS;gene=holE;product=DNA polymerase III%2C theta subunit;protein_id=NP_416356.1;transl_table=11 NC_000913.3 RefSeq gene 1925440 1926096 . + . ID=gene1891;Dbxref=EcoGene:EG14030,GeneID:948329;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;gene_synonym=ECK1844,JW1832;locus_tag=b1843 NC_000913.3 RefSeq CDS 1925440 1926096 . + 0 ID=cds1834;Parent=gene1891;Dbxref=ASAP:ABE-0006129,UniProtKB/Swiss-Prot:P76280,Genbank:NP_416357.1,EcoGene:EG14030,GeneID:948329;Name=NP_416357.1;gbkey=CDS;gene=yobB;product=C-N hydrolase family protein;protein_id=NP_416357.1;transl_table=11 NC_000913.3 RefSeq gene 1926120 1926782 . + . ID=gene1892;Dbxref=EcoGene:EG14031,GeneID:946361;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;gene_synonym=ECK1845,JW1833,yobC;locus_tag=b1844 NC_000913.3 RefSeq CDS 1926120 1926782 . + 0 ID=cds1835;Parent=gene1892;Dbxref=ASAP:ABE-0006131,UniProtKB/Swiss-Prot:P0AEK0,Genbank:NP_416358.1,EcoGene:EG14031,GeneID:946361;Name=NP_416358.1;gbkey=CDS;gene=exoX;product=exodeoxyribonuclease 10%3B DNA exonuclease X;protein_id=NP_416358.1;transl_table=11 NC_000913.3 RefSeq gene 1926779 1928839 . - . ID=gene1893;Dbxref=EcoGene:EG11004,GeneID:946358;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;gene_synonym=ECK1846,JW1834,opdB,tlp;locus_tag=b1845 NC_000913.3 RefSeq CDS 1926779 1928839 . - 0 ID=cds1836;Parent=gene1893;Dbxref=ASAP:ABE-0006133,UniProtKB/Swiss-Prot:P24555,Genbank:NP_416359.1,EcoGene:EG11004,GeneID:946358;Name=NP_416359.1;gbkey=CDS;gene=ptrB;product=protease II;protein_id=NP_416359.1;transl_table=11 NC_000913.3 RefSeq gene 1929048 1929707 . - . ID=gene1894;Dbxref=EcoGene:EG11806,GeneID:946355;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;gene_synonym=ECK1847,JW1835;locus_tag=b1846 NC_000913.3 RefSeq CDS 1929048 1929707 . - 0 ID=cds1837;Parent=gene1894;Dbxref=ASAP:ABE-0006137,UniProtKB/Swiss-Prot:P33218,Genbank:NP_416360.1,EcoGene:EG11806,GeneID:946355;Name=NP_416360.1;gbkey=CDS;gene=yebE;product=DUF533 family inner membrane protein;protein_id=NP_416360.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1929923 1930006 . + . ID=id224;Note=REP135 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1930034 1930390 . - . ID=gene1895;Dbxref=EcoGene:EG11807,GeneID:946363;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;gene_synonym=ECK1848,JW1836;locus_tag=b1847 NC_000913.3 RefSeq CDS 1930034 1930390 . - 0 ID=cds1838;Parent=gene1895;Dbxref=ASAP:ABE-0006141,UniProtKB/Swiss-Prot:P33219,Genbank:NP_416361.2,EcoGene:EG11807,GeneID:946363;Name=NP_416361.2;gbkey=CDS;gene=yebF;product=extracellular Colicin M immunity family protein;protein_id=NP_416361.2;transl_table=11 NC_000913.3 RefSeq gene 1930457 1930747 . - . ID=gene1896;Dbxref=EcoGene:EG11808,GeneID:946364;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;gene_synonym=ECK1849,JW1837;locus_tag=b1848 NC_000913.3 RefSeq CDS 1930457 1930747 . - 0 ID=cds1839;Parent=gene1896;Dbxref=ASAP:ABE-0006145,UniProtKB/Swiss-Prot:P0ACY9,Genbank:NP_416362.1,EcoGene:EG11808,GeneID:946364;Name=NP_416362.1;gbkey=CDS;gene=yebG;product=DNA damage-inducible protein regulated by LexA;protein_id=NP_416362.1;transl_table=11 NC_000913.3 RefSeq gene 1930881 1932059 . + . ID=gene1897;Dbxref=EcoGene:EG11809,GeneID:946368;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;gene_synonym=ECK1850,JW1838;locus_tag=b1849 NC_000913.3 RefSeq CDS 1930881 1932059 . + 0 ID=cds1840;Parent=gene1897;Dbxref=ASAP:ABE-0006162,UniProtKB/Swiss-Prot:P33221,Genbank:NP_416363.1,EcoGene:EG11809,GeneID:946368;Name=NP_416363.1;gbkey=CDS;gene=purT;product=phosphoribosylglycinamide formyltransferase 2;protein_id=NP_416363.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1932086 1932104 . + . ID=id225;Note=REP136 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1932115 1932756 . - . ID=gene1898;Dbxref=EcoGene:EG10256,GeneID:946367;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;gene_synonym=ECK1851,hga,JW1839,kdgA,kga;locus_tag=b1850 NC_000913.3 RefSeq CDS 1932115 1932756 . - 0 ID=cds1841;Parent=gene1898;Dbxref=ASAP:ABE-0006164,UniProtKB/Swiss-Prot:P0A955,Genbank:NP_416364.1,EcoGene:EG10256,GeneID:946367;Name=NP_416364.1;Note=2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase;gbkey=CDS;gene=eda;product=KHG/KDPG aldolase%3B 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2-oxoglutarate aldolase;protein_id=NP_416364.1;transl_table=11 NC_000913.3 RefSeq gene 1932793 1934604 . - . ID=gene1899;Dbxref=EcoGene:EG10257,GeneID:946362;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;gene_synonym=ECK1852,JW1840;locus_tag=b1851 NC_000913.3 RefSeq CDS 1932793 1934604 . - 0 ID=cds1842;Parent=gene1899;Dbxref=ASAP:ABE-0006166,UniProtKB/Swiss-Prot:P0ADF6,Genbank:NP_416365.1,EcoGene:EG10257,GeneID:946362;Name=NP_416365.1;gbkey=CDS;gene=edd;product=6-phosphogluconate dehydratase;protein_id=NP_416365.1;transl_table=11 NC_000913.3 RefSeq gene 1934839 1936314 . - . ID=gene1900;Dbxref=EcoGene:EG11221,GeneID:946370;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;gene_synonym=ECK1853,JW1841;locus_tag=b1852 NC_000913.3 RefSeq CDS 1934839 1936314 . - 0 ID=cds1843;Parent=gene1900;Dbxref=ASAP:ABE-0006171,UniProtKB/Swiss-Prot:P0AC53,Genbank:NP_416366.1,EcoGene:EG11221,GeneID:946370;Name=NP_416366.1;gbkey=CDS;gene=zwf;product=glucose-6-phosphate 1-dehydrogenase;protein_id=NP_416366.1;transl_table=11 NC_000913.3 RefSeq gene 1936652 1937521 . + . ID=gene1901;Dbxref=EcoGene:EG12860,GeneID:946373;Name=yebK;gbkey=Gene;gene=yebK;gene_biotype=protein_coding;gene_synonym=ECK1854,hexR,JW1842;locus_tag=b1853 NC_000913.3 RefSeq CDS 1936652 1937521 . + 0 ID=cds1844;Parent=gene1901;Dbxref=ASAP:ABE-0006179,UniProtKB/Swiss-Prot:P46118,Genbank:NP_416367.1,EcoGene:EG12860,GeneID:946373;Name=NP_416367.1;gbkey=CDS;gene=yebK;product=putative DNA-binding transcriptional regulator;protein_id=NP_416367.1;transl_table=11 NC_000913.3 RefSeq gene 1937649 1939091 . + . ID=gene1902;Dbxref=EcoGene:EG10803,GeneID:946527;Name=pykA;gbkey=Gene;gene=pykA;gene_biotype=protein_coding;gene_synonym=ECK1855,JW1843;locus_tag=b1854 NC_000913.3 RefSeq CDS 1937649 1939091 . + 0 ID=cds1845;Parent=gene1902;Dbxref=ASAP:ABE-0006182,UniProtKB/Swiss-Prot:P21599,Genbank:NP_416368.1,EcoGene:EG10803,GeneID:946527;Name=NP_416368.1;Note=pyruvate kinase II%2C glucose stimulated;gbkey=CDS;gene=pykA;product=pyruvate kinase II;protein_id=NP_416368.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1939099 1939128 . + . ID=id226;Note=REP137 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1939222 1940193 . - . ID=gene1903;Dbxref=EcoGene:EG10614,GeneID:945143;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=ECK1856,JW1844,mlt,msbB,waaN;locus_tag=b1855 NC_000913.3 RefSeq CDS 1939222 1940193 . - 0 ID=cds1846;Parent=gene1903;Dbxref=ASAP:ABE-0006185,UniProtKB/Swiss-Prot:P24205,Genbank:NP_416369.1,EcoGene:EG10614,GeneID:945143;Name=NP_416369.1;Note=suppressor of htrB%2C heat shock protein;gbkey=CDS;gene=lpxM;product=myristoyl-acyl carrier protein (ACP)-dependent acyltransferase;protein_id=NP_416369.1;transl_table=11 NC_000913.3 RefSeq gene 1940313 1941635 . - . ID=gene1904;Dbxref=EcoGene:EG10013,GeneID:946376;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;gene_synonym=ECK1857,JW5304,yebA;locus_tag=b1856 NC_000913.3 RefSeq CDS 1940313 1941635 . - 0 ID=cds1847;Parent=gene1904;Dbxref=ASAP:ABE-0006189,UniProtKB/Swiss-Prot:P0AFS9,Genbank:NP_416370.2,EcoGene:EG10013,GeneID:946376;Name=NP_416370.2;gbkey=CDS;gene=mepM;product=murein DD-endopeptidase%2C space-maker hydrolase%2C septation protein;protein_id=NP_416370.2;transl_table=11 NC_000913.3 RefSeq gene 1941651 1942583 . - . ID=gene1905;Dbxref=EcoGene:EG12678,GeneID:946375;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=ECK1858,JW5831,yebL,yzzP;locus_tag=b1857 NC_000913.3 RefSeq CDS 1941651 1942583 . - 0 ID=cds1848;Parent=gene1905;Dbxref=ASAP:ABE-0006191,UniProtKB/Swiss-Prot:P39172,Genbank:NP_416371.4,EcoGene:EG12678,GeneID:946375;Name=NP_416371.4;gbkey=CDS;gene=znuA;product=zinc ABC transporter periplasmic binding protein;protein_id=NP_416371.4;transl_table=11 NC_000913.3 RefSeq gene 1942662 1943417 . + . ID=gene1906;Dbxref=EcoGene:EG13132,GeneID:946374;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=ECK1859,JW1847,yebM;locus_tag=b1858 NC_000913.3 RefSeq CDS 1942662 1943417 . + 0 ID=cds1849;Parent=gene1906;Dbxref=ASAP:ABE-0006198,UniProtKB/Swiss-Prot:P0A9X1,Genbank:NP_416372.1,EcoGene:EG13132,GeneID:946374;Name=NP_416372.1;gbkey=CDS;gene=znuC;product=zinc ABC transporter ATPase;protein_id=NP_416372.1;transl_table=11 NC_000913.3 RefSeq gene 1943414 1944199 . + . ID=gene1907;Dbxref=EcoGene:EG12368,GeneID:946372;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=ECK1860,JW1848,yebI;locus_tag=b1859 NC_000913.3 RefSeq CDS 1943414 1944199 . + 0 ID=cds1850;Parent=gene1907;Dbxref=ASAP:ABE-0006201,UniProtKB/Swiss-Prot:P39832,Genbank:NP_416373.1,EcoGene:EG12368,GeneID:946372;Name=NP_416373.1;gbkey=CDS;gene=znuB;product=zinc ABC transporter permease;protein_id=NP_416373.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1944219 1944345 . + . ID=id227;Note=REP138 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1944346 1945356 . - . ID=gene1908;Dbxref=EcoGene:EG10924,GeneID:946371;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;gene_synonym=ECK1861,JW1849;locus_tag=b1860 NC_000913.3 RefSeq CDS 1944346 1945356 . - 0 ID=cds1851;Parent=gene1908;Dbxref=ASAP:ABE-0006204,UniProtKB/Swiss-Prot:P0A812,Genbank:NP_416374.1,EcoGene:EG10924,GeneID:946371;Name=NP_416374.1;Note=Holliday junction helicase subunit A%3B branch migration%3B repair;gbkey=CDS;gene=ruvB;product=ATP-dependent DNA helicase%2C component of RuvABC resolvasome;protein_id=NP_416374.1;transl_table=11 NC_000913.3 RefSeq gene 1945365 1945976 . - . ID=gene1909;Dbxref=EcoGene:EG10923,GeneID:946369;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;gene_synonym=ECK1862,JW1850;locus_tag=b1861 NC_000913.3 RefSeq CDS 1945365 1945976 . - 0 ID=cds1852;Parent=gene1909;Dbxref=ASAP:ABE-0006206,UniProtKB/Swiss-Prot:P0A809,Genbank:NP_416375.1,EcoGene:EG10923,GeneID:946369;Name=NP_416375.1;Note=Holliday junction helicase subunit B%3B branch migration%3B repair;gbkey=CDS;gene=ruvA;product=component of RuvABC resolvasome%2C regulatory subunit;protein_id=NP_416375.1;transl_table=11 NC_000913.3 RefSeq gene 1946115 1946180 . - . ID=gene1910;Dbxref=EcoGene:EG14482,GeneID:7751641;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;gene_synonym=ECK4492;locus_tag=b4677 NC_000913.3 RefSeq CDS 1946115 1946180 . - 0 ID=cds1853;Parent=gene1910;Dbxref=UniProtKB/Swiss-Prot:C1P604,Genbank:YP_002791244.1,EcoGene:EG14482,GeneID:7751641;Name=YP_002791244.1;gbkey=CDS;gene=yobI;product=uncharacterized protein;protein_id=YP_002791244.1;transl_table=11 NC_000913.3 RefSeq gene 1946251 1946853 . + . ID=gene1911;Dbxref=EcoGene:EG11136,GeneID:946377;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;gene_synonym=ECK1863,JW5306;locus_tag=b1862 NC_000913.3 RefSeq CDS 1946251 1946853 . + 0 ID=cds1854;Parent=gene1911;Dbxref=ASAP:ABE-0006213,UniProtKB/Swiss-Prot:P24238,Genbank:NP_416376.2,EcoGene:EG11136,GeneID:946377;Name=NP_416376.2;gbkey=CDS;gene=yebB;product=DUF830 family protein;protein_id=NP_416376.2;transl_table=11 NC_000913.3 RefSeq gene 1946855 1947376 . - . ID=gene1912;Dbxref=EcoGene:EG10925,GeneID:946378;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;gene_synonym=ECK1864,JW1852;locus_tag=b1863 NC_000913.3 RefSeq CDS 1946855 1947376 . - 0 ID=cds1855;Parent=gene1912;Dbxref=ASAP:ABE-0006215,UniProtKB/Swiss-Prot:P0A814,Genbank:NP_416377.1,EcoGene:EG10925,GeneID:946378;Name=NP_416377.1;Note=Holliday junction nuclease%3B resolution of structures%3B repair;gbkey=CDS;gene=ruvC;product=component of RuvABC resolvasome%2C endonuclease;protein_id=NP_416377.1;transl_table=11 NC_000913.3 RefSeq gene 1947411 1948151 . - . ID=gene1913;Dbxref=EcoGene:EG11137,GeneID:946379;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;gene_synonym=ECK1865,JW1853;locus_tag=b1864 NC_000913.3 RefSeq CDS 1947411 1948151 . - 0 ID=cds1856;Parent=gene1913;Dbxref=ASAP:ABE-0006219,UniProtKB/Swiss-Prot:P0A8A0,Genbank:NP_416378.1,EcoGene:EG11137,GeneID:946379;Name=NP_416378.1;gbkey=CDS;gene=yebC;product=UPF0082 family protein;protein_id=NP_416378.1;transl_table=11 NC_000913.3 RefSeq gene 1948180 1948632 . - . ID=gene1914;Dbxref=EcoGene:EG11138,GeneID:946383;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;gene_synonym=ECK1866,JW1854,ntpA,orf17,yebD;locus_tag=b1865 NC_000913.3 RefSeq CDS 1948180 1948632 . - 0 ID=cds1857;Parent=gene1914;Dbxref=ASAP:ABE-0006223,UniProtKB/Swiss-Prot:P0AFC0,Genbank:NP_416379.1,EcoGene:EG11138,GeneID:946383;Name=NP_416379.1;gbkey=CDS;gene=nudB;product=dihydroneopterin triphosphate pyrophosphatase;protein_id=NP_416379.1;transl_table=11 NC_000913.3 RefSeq gene 1948750 1950522 . - . ID=gene1915;Dbxref=EcoGene:EG10097,GeneID:946385;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;gene_synonym=ECK1867,JW1855,tls;locus_tag=b1866 NC_000913.3 RefSeq CDS 1948750 1950522 . - 0 ID=cds1858;Parent=gene1915;Dbxref=ASAP:ABE-0006226,UniProtKB/Swiss-Prot:P21889,Genbank:NP_416380.1,EcoGene:EG10097,GeneID:946385;Name=NP_416380.1;Note=aspartate tRNA synthetase;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=NP_416380.1;transl_table=11 NC_000913.3 RefSeq gene 1950832 1951398 . + . ID=gene1916;Dbxref=EcoGene:EG12378,GeneID:946384;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;gene_synonym=ECK1868,JW5307;locus_tag=b1867 NC_000913.3 RefSeq CDS 1950832 1951398 . + 0 ID=cds1859;Parent=gene1916;Dbxref=ASAP:ABE-0006231,UniProtKB/Swiss-Prot:P0ADI7,Genbank:NP_416381.2,EcoGene:EG12378,GeneID:946384;Name=NP_416381.2;gbkey=CDS;gene=yecD;product=isochorismatase family protein;protein_id=NP_416381.2;transl_table=11 NC_000913.3 RefSeq gene 1951395 1952213 . + . ID=gene1917;Dbxref=EcoGene:EG12379,GeneID:946382;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;gene_synonym=ECK1869,JW1857;locus_tag=b1868 NC_000913.3 RefSeq CDS 1951395 1952213 . + 0 ID=cds1860;Parent=gene1917;Dbxref=ASAP:ABE-0006233,UniProtKB/Swiss-Prot:P37348,Genbank:NP_416382.1,EcoGene:EG12379,GeneID:946382;Name=NP_416382.1;gbkey=CDS;gene=yecE;product=UPF0759 family protein;protein_id=NP_416382.1;transl_table=11 NC_000913.3 RefSeq gene 1952266 1952661 . + . ID=gene1918;Dbxref=EcoGene:EG14032,GeneID:946381;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;gene_synonym=ECK1870,JW5308;locus_tag=b1869 NC_000913.3 RefSeq CDS 1952266 1952661 . + 0 ID=cds1861;Parent=gene1918;Dbxref=ASAP:ABE-0006235,UniProtKB/Swiss-Prot:P64515,Genbank:NP_416383.4,EcoGene:EG14032,GeneID:946381;Name=NP_416383.4;gbkey=CDS;gene=yecN;product=MAPEG family inner membrane protein;protein_id=NP_416383.4;transl_table=11 NC_000913.3 RefSeq gene 1952702 1953445 . + . ID=gene1919;Dbxref=EcoGene:EG14033,GeneID:946380;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;gene_synonym=ECK1871,JW1859,yecO;locus_tag=b1870 NC_000913.3 RefSeq CDS 1952702 1953445 . + 0 ID=cds1862;Parent=gene1919;Dbxref=ASAP:ABE-0006237,UniProtKB/Swiss-Prot:P76290,Genbank:NP_416384.1,EcoGene:EG14033,GeneID:946380;Name=NP_416384.1;gbkey=CDS;gene=cmoA;product=carboxy-SAM synthase;protein_id=NP_416384.1;transl_table=11 NC_000913.3 RefSeq gene 1953442 1954413 . + . ID=gene1920;Dbxref=EcoGene:EG14034,GeneID:946387;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;gene_synonym=ECK1872,JW1860,yecP;locus_tag=b1871 NC_000913.3 RefSeq CDS 1953442 1954413 . + 0 ID=cds1863;Parent=gene1920;Dbxref=ASAP:ABE-0006241,UniProtKB/Swiss-Prot:P76291,Genbank:NP_416385.1,EcoGene:EG14034,GeneID:946387;Name=NP_416385.1;Note=putative enzyme;gbkey=CDS;gene=cmoB;product=tRNA (cmo5U34)-carboxymethyltransferase%2C carboxy-SAM-dependent;protein_id=NP_416385.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1954429 1954526 . + . ID=id228;Note=RIP139 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 1954578 1957007 . - . ID=gene1921;Dbxref=EcoGene:EG13276,GeneID:946389;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;gene_synonym=bisZ,ECK1873,JW1861;locus_tag=b1872 NC_000913.3 RefSeq CDS 1954578 1957007 . - 0 ID=cds1864;Parent=gene1921;Dbxref=ASAP:ABE-0006244,UniProtKB/Swiss-Prot:P46923,Genbank:NP_416386.4,EcoGene:EG13276,GeneID:946389;Name=NP_416386.4;gbkey=CDS;gene=torZ;product=trimethylamine N-oxide reductase system III%2C catalytic subunit;protein_id=NP_416386.4;transl_table=11 NC_000913.3 RefSeq gene 1957032 1958132 . - . ID=gene1922;Dbxref=EcoGene:EG13277,GeneID:946490;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;gene_synonym=ECK1874,JW1862,yecK;locus_tag=b1873 NC_000913.3 RefSeq CDS 1957032 1958132 . - 0 ID=cds1865;Parent=gene1922;Dbxref=ASAP:ABE-0006246,UniProtKB/Swiss-Prot:P52005,Genbank:NP_416387.1,EcoGene:EG13277,GeneID:946490;Name=NP_416387.1;gbkey=CDS;gene=torY;product=TMAO reductase III (TorYZ)%2C cytochrome c-type subunit;protein_id=NP_416387.1;transl_table=11 NC_000913.3 RefSeq gene 1958520 1959266 . - . ID=gene1923;Dbxref=EcoGene:EG12956,GeneID:2847756;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;gene_synonym=dinY?,ECK1875,JW1863;locus_tag=b1874 NC_000913.3 RefSeq CDS 1958520 1959266 . - 0 ID=cds1866;Parent=gene1923;Dbxref=ASAP:ABE-0006252,UniProtKB/Swiss-Prot:P67826,Genbank:YP_025309.2,EcoGene:EG12956,GeneID:2847756;Name=YP_025309.2;gbkey=CDS;gene=cutC;product=copper homeostasis protein;protein_id=YP_025309.2;transl_table=11 NC_000913.3 RefSeq gene 1959280 1959846 . - . ID=gene1924;Dbxref=EcoGene:EG13405,GeneID:946415;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;gene_synonym=ECK1876,JW5309,yecL;locus_tag=b1875 NC_000913.3 RefSeq CDS 1959280 1959846 . - 0 ID=cds1867;Parent=gene1924;Dbxref=ASAP:ABE-0006257,UniProtKB/Swiss-Prot:P52007,Genbank:NP_416389.4,EcoGene:EG13405,GeneID:946415;Name=NP_416389.4;gbkey=CDS;gene=yecM;product=putative metal-binding enzyme;protein_id=NP_416389.4;transl_table=11 NC_000913.3 RefSeq gene 1960062 1961795 . + . ID=gene1925;Dbxref=EcoGene:EG10071,GeneID:946452;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;gene_synonym=ECK1877,JW1865,lov;locus_tag=b1876 NC_000913.3 RefSeq CDS 1960062 1961795 . + 0 ID=cds1868;Parent=gene1925;Dbxref=ASAP:ABE-0006264,UniProtKB/Swiss-Prot:P11875,Genbank:NP_416390.1,EcoGene:EG10071,GeneID:946452;Name=NP_416390.1;Note=arginine tRNA synthetase;gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=NP_416390.1;transl_table=11 NC_000913.3 RefSeq gene 1961972 1962460 . + . ID=gene1926;Dbxref=EcoGene:EG14316,GeneID:946511;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;gene_synonym=ECK1878,JW5310;locus_tag=b1877 NC_000913.3 RefSeq CDS 1961972 1962460 . + 0 ID=cds1869;Parent=gene1926;Dbxref=ASAP:ABE-0006268,UniProtKB/Swiss-Prot:P76296,Genbank:NP_416391.4,EcoGene:EG14316,GeneID:946511;Name=NP_416391.4;gbkey=CDS;gene=yecT;product=uncharacterized protein;protein_id=NP_416391.4;transl_table=11 NC_000913.3 RefSeq gene 1962580 1962972 . - . ID=gene1927;Dbxref=EcoGene:EG14013,GeneID:946094;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;gene_synonym=ECK1879,JW1867;locus_tag=b1878 NC_000913.3 RefSeq CDS 1962580 1962972 . - 0 ID=cds1870;Parent=gene1927;Dbxref=ASAP:ABE-0006270,UniProtKB/Swiss-Prot:P76297,Genbank:NP_416392.1,EcoGene:EG14013,GeneID:946094;Name=NP_416392.1;Note=flagellar protein;gbkey=CDS;gene=flhE;product=proton seal during flagellar secretion;protein_id=NP_416392.1;transl_table=11 NC_000913.3 RefSeq gene 1962972 1965050 . - . ID=gene1928;Dbxref=EcoGene:EG14273,GeneID:946390;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;gene_synonym=ECK1880,flaH,JW1868;locus_tag=b1879 NC_000913.3 RefSeq CDS 1962972 1965050 . - 0 ID=cds1871;Parent=gene1928;Dbxref=ASAP:ABE-0006272,UniProtKB/Swiss-Prot:P76298,Genbank:NP_416393.1,EcoGene:EG14273,GeneID:946390;Name=NP_416393.1;Note=flagellar biosynthesis%3B possible export of flagellar proteins;gbkey=CDS;gene=flhA;product=putative flagellar export pore protein;protein_id=NP_416393.1;transl_table=11 NC_000913.3 RefSeq gene 1965043 1966191 . - . ID=gene1929;Dbxref=EcoGene:EG14035,GeneID:946391;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;gene_synonym=ECK1881,flaG,JW1869,yecQ;locus_tag=b1880 NC_000913.3 RefSeq CDS 1965043 1966191 . - 0 ID=cds1872;Parent=gene1929;Dbxref=ASAP:ABE-0006275,UniProtKB/Swiss-Prot:P76299,Genbank:NP_416394.1,EcoGene:EG14035,GeneID:946391;Name=NP_416394.1;Note=putative part of export apparatus for flagellar proteins;gbkey=CDS;gene=flhB;product=flagellin export apparatus%2C substrate specificity protein;protein_id=NP_416394.1;transl_table=11 NC_000913.3 RefSeq repeat_region 1966322 1966384 . + . ID=id229;Note=REP140 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 1966393 1967037 . - . ID=gene1930;Dbxref=EcoGene:EG10151,GeneID:946392;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;gene_synonym=ECK1882,JW1870;locus_tag=b1881 NC_000913.3 RefSeq CDS 1966393 1967037 . - 0 ID=cds1873;Parent=gene1930;Dbxref=ASAP:ABE-0006278,UniProtKB/Swiss-Prot:P0A9H9,Genbank:NP_416395.1,EcoGene:EG10151,GeneID:946392;Name=NP_416395.1;Note=chemotactic response%3B CheY protein phophatase%3B antagonist of CheY as switch regulator;gbkey=CDS;gene=cheZ;product=chemotaxis regulator%2C protein phosphatase for CheY;protein_id=NP_416395.1;transl_table=11 NC_000913.3 RefSeq gene 1967048 1967437 . - . ID=gene1931;Dbxref=EcoGene:EG10150,GeneID:946393;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;gene_synonym=ECK1883,JW1871;locus_tag=b1882 NC_000913.3 RefSeq CDS 1967048 1967437 . - 0 ID=cds1874;Parent=gene1931;Dbxref=ASAP:ABE-0006280,UniProtKB/Swiss-Prot:P0AE67,Genbank:NP_416396.1,EcoGene:EG10150,GeneID:946393;Name=NP_416396.1;Note=chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components;gbkey=CDS;gene=cheY;product=chemotaxis regulator transmitting signal to flagellar motor component;protein_id=NP_416396.1;transl_table=11 NC_000913.3 RefSeq gene 1967452 1968501 . - . ID=gene1932;Dbxref=EcoGene:EG10147,GeneID:946394;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;gene_synonym=ECK1884,JW1872;locus_tag=b1883 NC_000913.3 RefSeq CDS 1967452 1968501 . - 0 ID=cds1875;Parent=gene1932;Dbxref=ASAP:ABE-0006284,UniProtKB/Swiss-Prot:P07330,Genbank:NP_416397.1,EcoGene:EG10147,GeneID:946394;Name=NP_416397.1;Note=response regulator for chemotaxis (cheA sensor)%3B protein methylesterase;gbkey=CDS;gene=cheB;product=fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA;protein_id=NP_416397.1;transl_table=11 NC_000913.3 RefSeq gene 1968504 1969364 . - . ID=gene1933;Dbxref=EcoGene:EG10148,GeneID:946396;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;gene_synonym=cheX,ECK1885,JW1873;locus_tag=b1884 NC_000913.3 RefSeq CDS 1968504 1969364 . - 0 ID=cds1876;Parent=gene1933;Dbxref=ASAP:ABE-0006286,UniProtKB/Swiss-Prot:P07364,Genbank:NP_416398.1,EcoGene:EG10148,GeneID:946396;Name=NP_416398.1;Note=response regulator for chemotaxis%3B protein glutamate methyltransferase;gbkey=CDS;gene=cheR;product=chemotaxis regulator%2C protein-glutamate methyltransferase;protein_id=NP_416398.1;transl_table=11 NC_000913.3 RefSeq gene 1969383 1970984 . - . ID=gene1934;Dbxref=EcoGene:EG10987,GeneID:946397;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;gene_synonym=ECK1886,JW1874;locus_tag=b1885 NC_000913.3 RefSeq CDS 1969383 1970984 . - 0 ID=cds1877;Parent=gene1934;Dbxref=ASAP:ABE-0006288,UniProtKB/Swiss-Prot:P07018,Genbank:NP_416399.1,EcoGene:EG10987,GeneID:946397;Name=NP_416399.1;Note=methyl-accepting chemotaxis protein IV%2C peptide sensor receptor;gbkey=CDS;gene=tap;product=methyl-accepting protein IV;protein_id=NP_416399.1;transl_table=11 NC_000913.3 RefSeq gene 1971030 1972691 . - . ID=gene1935;Dbxref=EcoGene:EG10988,GeneID:946399;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;gene_synonym=cheM,ECK1887,JW1875;locus_tag=b1886 NC_000913.3 RefSeq CDS 1971030 1972691 . - 0 ID=cds1878;Parent=gene1935;Dbxref=ASAP:ABE-0006290,UniProtKB/Swiss-Prot:P07017,Genbank:NP_416400.1,EcoGene:EG10988,GeneID:946399;Name=NP_416400.1;Note=methyl-accepting chemotaxis protein II%2C aspartate sensor receptor;gbkey=CDS;gene=tar;product=methyl-accepting chemotaxis protein II;protein_id=NP_416400.1;transl_table=11 NC_000913.3 RefSeq gene 1972836 1973339 . - . ID=gene1936;Dbxref=EcoGene:EG10149,GeneID:946400;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;gene_synonym=ECK1888,JW1876;locus_tag=b1887 NC_000913.3 RefSeq CDS 1972836 1973339 . - 0 ID=cds1879;Parent=gene1936;Dbxref=ASAP:ABE-0006292,UniProtKB/Swiss-Prot:P0A964,Genbank:NP_416401.1,EcoGene:EG10149,GeneID:946400;Name=NP_416401.1;Note=positive regulator of CheA protein activity;gbkey=CDS;gene=cheW;product=purine-binding chemotaxis protein;protein_id=NP_416401.1;transl_table=11 NC_000913.3 RefSeq gene 1973360 1975324 . - . ID=gene1937;Dbxref=EcoGene:EG10146,GeneID:946401;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;gene_synonym=ECK1889,JW1877;locus_tag=b1888 NC_000913.3 RefSeq CDS 1973360 1975324 . - 0 ID=cds1880;Parent=gene1937;Dbxref=ASAP:ABE-0006294,UniProtKB/Swiss-Prot:P07363,Genbank:NP_416402.1,EcoGene:EG10146,GeneID:946401;Name=NP_416402.1;Note=sensory transducer kinase between chemo- signal receptors and CheB and CheY;gbkey=CDS;gene=cheA;product=fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein;protein_id=NP_416402.1;transl_table=11 NC_000913.3 RefSeq gene 1975329 1976255 . - . ID=gene1938;Dbxref=EcoGene:EG10602,GeneID:946402;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;gene_synonym=ECK1890,flaJ,JW1878;locus_tag=b1889 NC_000913.3 RefSeq CDS 1975329 1976255 . - 0 ID=cds1881;Parent=gene1938;Dbxref=ASAP:ABE-0006297,UniProtKB/Swiss-Prot:P0AF06,Genbank:NP_416403.1,EcoGene:EG10602,GeneID:946402;Name=NP_416403.1;Note=enables flagellar motor rotation%2C linking torque machinery to cell wall;gbkey=CDS;gene=motB;product=protein that enables flagellar motor rotation;protein_id=NP_416403.1;transl_table=11 NC_000913.3 RefSeq gene 1976252 1977139 . - . ID=gene1939;Dbxref=EcoGene:EG10601,GeneID:947564;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;gene_synonym=ECK1891,flaJ,JW1879;locus_tag=b1890 NC_000913.3 RefSeq CDS 1976252 1977139 . - 0 ID=cds1882;Parent=gene1939;Dbxref=ASAP:ABE-0006299,UniProtKB/Swiss-Prot:P09348,Genbank:NP_416404.1,EcoGene:EG10601,GeneID:947564;Name=NP_416404.1;Note=proton conductor component of motor%3B no effect on switching;gbkey=CDS;gene=motA;product=proton conductor component of flagella motor;protein_id=NP_416404.1;transl_table=11 NC_000913.3 RefSeq gene 1977266 1977844 . - . ID=gene1940;Dbxref=EcoGene:EG10319,GeneID:947280;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;gene_synonym=ECK1892,flaI,JW1880;locus_tag=b1891 NC_000913.3 RefSeq CDS 1977266 1977844 . - 0 ID=cds1883;Parent=gene1940;Dbxref=ASAP:ABE-0006301,UniProtKB/Swiss-Prot:P0ABY7,Genbank:NP_416405.1,EcoGene:EG10319,GeneID:947280;Name=NP_416405.1;Note=regulator of flagellar biosynthesis acting on class 2 operons%3B transcription initiation factor?;gbkey=CDS;gene=flhC;product=flagellar class II regulon transcriptional activator%2C with FlhD;protein_id=NP_416405.1;transl_table=11 NC_000913.3 RefSeq gene 1977847 1978197 . - . ID=gene1941;Dbxref=EcoGene:EG10320,GeneID:945442;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;gene_synonym=ECK1893,flbB,JW1881;locus_tag=b1892 NC_000913.3 RefSeq CDS 1977847 1978197 . - 0 ID=cds1884;Parent=gene1941;Dbxref=ASAP:ABE-0006303,UniProtKB/Swiss-Prot:P0A8S9,Genbank:NP_416406.4,EcoGene:EG10320,GeneID:945442;Name=NP_416406.4;Note=regulator of flagellar biosynthesis%2C acting on class 2 operons%3B transcriptional initiation factor?;gbkey=CDS;gene=flhD;product=flagellar class II regulon transcriptional activator%2C with FlhC;protein_id=NP_416406.4;transl_table=11 NC_000913.3 RefSeq region 1978503 1979270 . - . ID=id230;gbkey=mobile_element NC_000913.3 RefSeq gene 1978518 1979021 . - . ID=gene1942;Dbxref=EcoGene:EG40002,GeneID:945867;Name=insB1;gbkey=Gene;gene=insB1;gene_biotype=protein_coding;gene_synonym=ECK0022;locus_tag=b1893 NC_000913.3 RefSeq CDS 1978518 1979021 . - 0 ID=cds1885;Parent=gene1942;Dbxref=ASAP:ABE-0006308,UniProtKB/Swiss-Prot:P0CF30,Genbank:NP_416407.1,EcoGene:EG40002,GeneID:945867;Name=NP_416407.1;gbkey=CDS;gene=insB1;product=IS1 transposase B;protein_id=NP_416407.1;transl_table=11 NC_000913.3 RefSeq gene 1978940 1979215 . - . ID=gene1943;Dbxref=EcoGene:EG40001,GeneID:945800;Name=insA;Note=insA8;gbkey=Gene;gene=insA;gene_biotype=protein_coding;gene_synonym=ECK4541;locus_tag=b1894 NC_000913.3 RefSeq CDS 1978940 1979215 . - 0 ID=cds1886;Parent=gene1943;Dbxref=ASAP:ABE-0006311,UniProtKB/Swiss-Prot:P0CF13,Genbank:NP_416408.1,EcoGene:EG40001,GeneID:945800;Name=NP_416408.1;gbkey=CDS;gene=insA;product=IS1 repressor TnpA;protein_id=NP_416408.1;transl_table=11 NC_000913.3 RefSeq gene 1979753 1980181 . + . ID=gene1944;Dbxref=EcoGene:EG12862,GeneID:946404;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;gene_synonym=ECK1894,JW1884,yecG;locus_tag=b1895 NC_000913.3 RefSeq CDS 1979753 1980181 . + 0 ID=cds1887;Parent=gene1944;Dbxref=ASAP:ABE-0006316,UniProtKB/Swiss-Prot:P46888,Genbank:NP_416409.1,EcoGene:EG12862,GeneID:946404;Name=NP_416409.1;Note=putative regulator;gbkey=CDS;gene=uspC;product=universal stress protein;protein_id=NP_416409.1;transl_table=11 NC_000913.3 RefSeq gene 1980188 1981612 . - . ID=gene1945;Dbxref=EcoGene:EG11751,GeneID:946405;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;gene_synonym=ECK1895,JW5312,pexA;locus_tag=b1896 NC_000913.3 RefSeq CDS 1980188 1981612 . - 0 ID=cds1888;Parent=gene1945;Dbxref=ASAP:ABE-0006318,UniProtKB/Swiss-Prot:P31677,Genbank:NP_416410.1,EcoGene:EG11751,GeneID:946405;Name=NP_416410.1;gbkey=CDS;gene=otsA;product=trehalose-6-phosphate synthase;protein_id=NP_416410.1;transl_table=11 NC_000913.3 RefSeq gene 1981587 1982387 . - . ID=gene1946;Dbxref=EcoGene:EG11752,GeneID:946406;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;gene_synonym=ECK1896,JW1886,otsP;locus_tag=b1897 NC_000913.3 RefSeq CDS 1981587 1982387 . - 0 ID=cds1889;Parent=gene1946;Dbxref=ASAP:ABE-0006320,UniProtKB/Swiss-Prot:P31678,Genbank:NP_416411.1,EcoGene:EG11752,GeneID:946406;Name=NP_416411.1;Note=trehalose-6-phosphate phophatase%2C biosynthetic;gbkey=CDS;gene=otsB;product=trehalose-6-phosphate phosphatase%2C biosynthetic;protein_id=NP_416411.1;transl_table=11 NC_000913.3 RefSeq gene 1982554 1983540 . - . ID=gene1947;Dbxref=EcoGene:EG10059,GeneID:948923;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;gene_synonym=ECK1897,JW1887;locus_tag=b4460 NC_000913.3 RefSeq CDS 1982554 1983540 . - 0 ID=cds1890;Parent=gene1947;Dbxref=ASAP:ABE-0174093,UniProtKB/Swiss-Prot:P0AE26,Genbank:YP_026162.2,EcoGene:EG10059,GeneID:948923;Name=YP_026162.2;Note=high-affinity L-arabinose transport protein (ABC superfamily%2C membrane);gbkey=CDS;gene=araH;product=L-arabinose ABC transporter permease;protein_id=YP_026162.2;transl_table=11 NC_000913.3 RefSeq gene 1983555 1985069 . - . ID=gene1948;Dbxref=EcoGene:EG10058,GeneID:946408;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;gene_synonym=ECK1898,JW1888;locus_tag=b1900 NC_000913.3 RefSeq CDS 1983555 1985069 . - 0 ID=cds1891;Parent=gene1948;Dbxref=ASAP:ABE-0006328,UniProtKB/Swiss-Prot:P0AAF3,Genbank:NP_416413.1,EcoGene:EG10058,GeneID:946408;Name=NP_416413.1;Note=ATP-binding component of high-affinity L-arabinose transport system;gbkey=CDS;gene=araG;product=L-arabinose ABC transporter ATPase;protein_id=NP_416413.1;transl_table=11 NC_000913.3 RefSeq gene 1985139 1986128 . - . ID=gene1949;Dbxref=EcoGene:EG10057,GeneID:946409;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;gene_synonym=ECK1899,JW1889;locus_tag=b1901 NC_000913.3 RefSeq CDS 1985139 1986128 . - 0 ID=cds1892;Parent=gene1949;Dbxref=ASAP:ABE-0006330,UniProtKB/Swiss-Prot:P02924,Genbank:NP_416414.1,EcoGene:EG10057,GeneID:946409;Name=NP_416414.1;Note=L-arabinose-binding periplasmic protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=araF;product=L-arabinose ABC transporter periplasmic binding protein;protein_id=NP_416414.1;transl_table=11 NC_000913.3 RefSeq gene 1986925 1987428 . + . ID=gene1950;Dbxref=EcoGene:EG13175,GeneID:946407;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;gene_synonym=ECK1900,JW1890,yecI;locus_tag=b1902 NC_000913.3 RefSeq CDS 1986925 1987428 . + 0 ID=cds1893;Parent=gene1950;Dbxref=ASAP:ABE-0006333,UniProtKB/Swiss-Prot:P0A9A2,Genbank:NP_416415.1,EcoGene:EG13175,GeneID:946407;Name=NP_416415.1;Note=ferritin-like protein;gbkey=CDS;gene=ftnB;product=ferritin B%2C putative ferrous iron reservoir;protein_id=NP_416415.1;transl_table=11 NC_000913.3 RefSeq gene 1987507 1987758 . - . ID=gene1951;Dbxref=EcoGene:EG13242,GeneID:946388;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;gene_synonym=ECK1901,JW1891;locus_tag=b4537 NC_000913.3 RefSeq CDS 1987507 1987758 . - 0 ID=cds1894;Parent=gene1951;Dbxref=ASAP:ABE-0285058,UniProtKB/Swiss-Prot:P0AD10,Genbank:NP_416416.2,EcoGene:EG13242,GeneID:946388;Name=NP_416416.2;gbkey=CDS;gene=yecJ;product=DUF2766 family protein;protein_id=NP_416416.2;transl_table=11 NC_000913.3 RefSeq gene 1987873 1987959 . - . ID=gene1952;Dbxref=EcoGene:EG14468,GeneID:7751642;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;gene_synonym=ECK4478,IS092,isrB;locus_tag=b4663 NC_000913.3 RefSeq CDS 1987873 1987959 . - 0 ID=cds1895;Parent=gene1952;Dbxref=UniProtKB/Swiss-Prot:C1P605,Genbank:YP_002791245.1,EcoGene:EG14468,GeneID:7751642;Name=YP_002791245.1;gbkey=CDS;gene=azuC;product=acid-inducible small membrane-associated protein;protein_id=YP_002791245.1;transl_table=11 NC_000913.3 RefSeq gene 1988222 1988545 . + . ID=gene1953;Dbxref=EcoGene:EG14036,GeneID:946386;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;gene_synonym=ECK1903,JW1892;locus_tag=b1904 NC_000913.3 RefSeq CDS 1988222 1988545 . + 0 ID=cds1896;Parent=gene1953;Dbxref=ASAP:ABE-0006338,UniProtKB/Swiss-Prot:P76308,Genbank:NP_416417.1,EcoGene:EG14036,GeneID:946386;Name=NP_416417.1;gbkey=CDS;gene=yecR;product=lipoprotein%2C function unknown;protein_id=NP_416417.1;transl_table=11 NC_000913.3 RefSeq gene 1988716 1989213 . + . ID=gene1954;Dbxref=EcoGene:EG10921,GeneID:946410;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;gene_synonym=ECK1904,ftn,gen-165,JW1893,rsgA;locus_tag=b1905 NC_000913.3 RefSeq CDS 1988716 1989213 . + 0 ID=cds1897;Parent=gene1954;Dbxref=ASAP:ABE-0006342,UniProtKB/Swiss-Prot:P0A998,Genbank:NP_416418.1,EcoGene:EG10921,GeneID:946410;Name=NP_416418.1;Note=cytoplasmic ferritin (an iron storage protein);gbkey=CDS;gene=ftnA;product=ferritin iron storage protein (cytoplasmic);protein_id=NP_416418.1;transl_table=11 NC_000913.3 RefSeq gene 1989251 1989490 . - . ID=gene1955;Dbxref=EcoGene:EG12863,GeneID:946411;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;gene_synonym=ECK1905,JW1894;locus_tag=b1906 NC_000913.3 RefSeq CDS 1989251 1989490 . - 0 ID=cds1898;Parent=gene1955;Dbxref=ASAP:ABE-0006344,UniProtKB/Swiss-Prot:P46887,Genbank:NP_416419.1,EcoGene:EG12863,GeneID:946411;Name=NP_416419.1;gbkey=CDS;gene=yecH;product=DUF2492 family protein;protein_id=NP_416419.1;transl_table=11 NC_000913.3 RefSeq gene 1989681 1990892 . + . ID=gene1956;Dbxref=EcoGene:EG11041,GeneID:946412;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;gene_synonym=ECK1906,JW1895;locus_tag=b1907 NC_000913.3 RefSeq CDS 1989681 1990892 . + 0 ID=cds1899;Parent=gene1956;Dbxref=ASAP:ABE-0006355,UniProtKB/Swiss-Prot:P0AAD4,Genbank:NP_416420.1,EcoGene:EG11041,GeneID:946412;Name=NP_416420.1;Note=tyrosine-specific transport system;gbkey=CDS;gene=tyrP;product=tyrosine transporter;protein_id=NP_416420.1;transl_table=11 NC_000913.3 RefSeq gene 1990954 1991619 . - . ID=gene1957;Dbxref=EcoGene:EG11139,GeneID:945061;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;gene_synonym=ECK1907,JW1896;locus_tag=b1908 NC_000913.3 RefSeq CDS 1990954 1991619 . - 0 ID=cds1900;Parent=gene1957;Dbxref=ASAP:ABE-0006357,UniProtKB/Swiss-Prot:P0AD05,Genbank:NP_416421.1,EcoGene:EG11139,GeneID:945061;Name=NP_416421.1;gbkey=CDS;gene=yecA;product=UPF0149 family protein;protein_id=NP_416421.1;transl_table=11 NC_000913.3 RefSeq gene 1991815 1991901 . - . ID=gene1958;Dbxref=EcoGene:EG30054,GeneID:945662;Name=leuZ;gbkey=Gene;gene=leuZ;gene_biotype=tRNA;gene_synonym=ECK1908,JWR0033;locus_tag=b1909 NC_000913.3 RefSeq tRNA 1991815 1991901 . - . ID=rna56;Parent=gene1958;Dbxref=ASAP:ABE-0006361,EcoGene:EG30054,GeneID:945662;Note=anticodon: GAG;gbkey=tRNA;gene=leuZ;product=tRNA-Leu NC_000913.3 RefSeq exon 1991815 1991901 . - . ID=id231;Parent=rna56;Dbxref=ASAP:ABE-0006361,EcoGene:EG30054,GeneID:945662;Note=anticodon: GAG;gbkey=tRNA;gene=leuZ;product=tRNA-Leu NC_000913.3 RefSeq gene 1991914 1991987 . - . ID=gene1959;Dbxref=EcoGene:EG30026,GeneID:946414;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=tRNA;gene_synonym=ECK1909,JWR0034;locus_tag=b1910 NC_000913.3 RefSeq tRNA 1991914 1991987 . - . ID=rna57;Parent=gene1959;Dbxref=ASAP:ABE-0006363,EcoGene:EG30026,GeneID:946414;Note=anticodon: GCA;gbkey=tRNA;gene=cysT;product=tRNA-Cys NC_000913.3 RefSeq exon 1991914 1991987 . - . ID=id232;Parent=rna57;Dbxref=ASAP:ABE-0006363,EcoGene:EG30026,GeneID:946414;Note=anticodon: GCA;gbkey=tRNA;gene=cysT;product=tRNA-Cys NC_000913.3 RefSeq gene 1992042 1992117 . - . ID=gene1960;Dbxref=EcoGene:EG30039,GeneID:946416;Name=glyW;gbkey=Gene;gene=glyW;gene_biotype=tRNA;gene_synonym=ECK1910,ins,JWR0035,mutC,suA58,suA78;locus_tag=b1911 NC_000913.3 RefSeq tRNA 1992042 1992117 . - . ID=rna58;Parent=gene1960;Dbxref=ASAP:ABE-0006365,EcoGene:EG30039,GeneID:946416;Note=anticodon: GCC;gbkey=tRNA;gene=glyW;product=tRNA-Gly NC_000913.3 RefSeq exon 1992042 1992117 . - . ID=id233;Parent=rna58;Dbxref=ASAP:ABE-0006365,EcoGene:EG30039,GeneID:946416;Note=anticodon: GCC;gbkey=tRNA;gene=glyW;product=tRNA-Gly NC_000913.3 RefSeq gene 1992269 1992817 . - . ID=gene1961;Dbxref=EcoGene:EG10706,GeneID:945791;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;gene_synonym=ECK1911,JW1897;locus_tag=b1912 NC_000913.3 RefSeq CDS 1992269 1992817 . - 0 ID=cds1901;Parent=gene1961;Dbxref=ASAP:ABE-0006367,UniProtKB/Swiss-Prot:P0ABF8,Genbank:NP_416422.1,EcoGene:EG10706,GeneID:945791;Name=NP_416422.1;Note=phosphatidylglycerophosphate synthetase %3D CDP-1%2C2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase;gbkey=CDS;gene=pgsA;product=phosphatidylglycerophosphate synthetase;protein_id=NP_416422.1;transl_table=11 NC_000913.3 RefSeq gene 1992874 1994706 . - . ID=gene1962;Dbxref=EcoGene:EG11063,GeneID:947203;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;gene_synonym=ECK1912,JW1898;locus_tag=b1913 NC_000913.3 RefSeq CDS 1992874 1994706 . - 0 ID=cds1902;Parent=gene1962;Dbxref=ASAP:ABE-0006370,UniProtKB/Swiss-Prot:P0A8G0,Genbank:NP_416423.4,EcoGene:EG11063,GeneID:947203;Name=NP_416423.4;Note=excinuclease ABC%2C subunit C%3B repair of UV damage to DNA;gbkey=CDS;gene=uvrC;product=excinuclease UvrABC%2C endonuclease subunit;protein_id=NP_416423.4;transl_table=11 NC_000913.3 RefSeq gene 1994703 1995359 . - . ID=gene1963;Dbxref=EcoGene:EG11140,GeneID:946424;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;gene_synonym=ECK1913,gacA,JW1899,sirA,yecB;locus_tag=b1914 NC_000913.3 RefSeq CDS 1994703 1995359 . - 0 ID=cds1903;Parent=gene1963;Dbxref=ASAP:ABE-0006373,UniProtKB/Swiss-Prot:P0AED5,Genbank:NP_416424.1,EcoGene:EG11140,GeneID:946424;Name=NP_416424.1;Note=putative 2-component transcriptional regulator;gbkey=CDS;gene=uvrY;product=response regulator in two-component regulatory system with BarA;protein_id=NP_416424.1;transl_table=11 NC_000913.3 RefSeq gene 1995818 1996042 . + . ID=gene1964;Dbxref=EcoGene:EG12861,GeneID:946420;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;gene_synonym=ECK1914,JW1900;locus_tag=b1915 NC_000913.3 RefSeq CDS 1995818 1996042 . + 0 ID=cds1904;Parent=gene1964;Dbxref=ASAP:ABE-0006379,UniProtKB/Swiss-Prot:P0AD07,Genbank:NP_416425.1,EcoGene:EG12861,GeneID:946420;Name=NP_416425.1;gbkey=CDS;gene=yecF;product=DUF2594 family protein;protein_id=NP_416425.1;transl_table=11 NC_000913.3 RefSeq gene 1996110 1996832 . - . ID=gene1965;Dbxref=EcoGene:EG10935,GeneID:946421;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;gene_synonym=ECK1915,JW1901,uvrX;locus_tag=b1916 NC_000913.3 RefSeq CDS 1996110 1996832 . - 0 ID=cds1905;Parent=gene1965;Dbxref=ASAP:ABE-0006381,UniProtKB/Swiss-Prot:P07026,Genbank:NP_416426.1,EcoGene:EG10935,GeneID:946421;Name=NP_416426.1;Note=transcriptional regulator of ftsQAZ gene cluster;gbkey=CDS;gene=sdiA;product=quorum-sensing transcriptional activator;protein_id=NP_416426.1;transl_table=11 NC_000913.3 RefSeq gene 1997062 1997814 . - . ID=gene1966;Dbxref=EcoGene:EG12347,GeneID:946422;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;gene_synonym=ECK1916,JW1902;locus_tag=b1917 NC_000913.3 RefSeq CDS 1997062 1997814 . - 0 ID=cds1906;Parent=gene1966;Dbxref=ASAP:ABE-0006384,UniProtKB/Swiss-Prot:P37774,Genbank:NP_416427.1,EcoGene:EG12347,GeneID:946422;Name=NP_416427.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yecC;product=putative ABC transporter ATPase;protein_id=NP_416427.1;transl_table=11 NC_000913.3 RefSeq gene 1997811 1998479 . - . ID=gene1967;Dbxref=EcoGene:EG14037,GeneID:949105;Name=yecS;gbkey=Gene;gene=yecS;gene_biotype=protein_coding;gene_synonym=ECK1917,JW1903;locus_tag=b1918 NC_000913.3 RefSeq CDS 1997811 1998479 . - 0 ID=cds1907;Parent=gene1967;Dbxref=ASAP:ABE-0006386,UniProtKB/Swiss-Prot:P0AFT2,Genbank:NP_416428.1,EcoGene:EG14037,GeneID:949105;Name=NP_416428.1;Note=putative transport system permease protein (former yecC);gbkey=CDS;gene=yecS;product=ABC family putative inner membrane permease;protein_id=NP_416428.1;transl_table=11 NC_000913.3 RefSeq gene 1998494 1999480 . - . ID=gene1968;Dbxref=EcoGene:EG14038,GeneID:946831;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;gene_synonym=ECK1918,JW5313,yedO;locus_tag=b1919 NC_000913.3 RefSeq CDS 1998494 1999480 . - 0 ID=cds1908;Parent=gene1968;Dbxref=ASAP:ABE-0006389,UniProtKB/Swiss-Prot:P76316,Genbank:NP_416429.4,EcoGene:EG14038,GeneID:946831;Name=NP_416429.4;Note=putative 1-aminocyclopropane-1-carboxylate deaminase;gbkey=CDS;gene=dcyD;product=D-cysteine desulfhydrase%2C PLP-dependent;protein_id=NP_416429.4;transl_table=11 NC_000913.3 RefSeq gene 1999585 2000385 . - . ID=gene1969;Dbxref=EcoGene:EG12680,GeneID:948833;Name=fliY;gbkey=Gene;gene=fliY;gene_biotype=protein_coding;gene_synonym=ECK1919,JW1905,yzzR;locus_tag=b1920 NC_000913.3 RefSeq CDS 1999585 2000385 . - 0 ID=cds1909;Parent=gene1969;Dbxref=ASAP:ABE-0006392,UniProtKB/Swiss-Prot:P0AEM9,Genbank:NP_416430.1,EcoGene:EG12680,GeneID:948833;Name=NP_416430.1;Note=putative periplasmic binding transport protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=fliY;product=cystine transporter subunit;protein_id=NP_416430.1;transl_table=11 NC_000913.3 RefSeq gene 2000473 2001024 . - . ID=gene1970;Dbxref=EcoGene:EG11356,GeneID:946833;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;gene_synonym=ECK1920,JW1906,yedH;locus_tag=b1921 NC_000913.3 RefSeq CDS 2000473 2001024 . - 0 ID=cds1910;Parent=gene1970;Dbxref=ASAP:ABE-0006394,UniProtKB/Swiss-Prot:P52627,Genbank:NP_416431.2,EcoGene:EG11356,GeneID:946833;Name=NP_416431.2;gbkey=CDS;gene=fliZ;product=RpoS antagonist%3B putative regulator of FliA activity;protein_id=NP_416431.2;transl_table=11 NC_000913.3 RefSeq gene 2001070 2001789 . - . ID=gene1971;Dbxref=EcoGene:EG11355,GeneID:948824;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;gene_synonym=ECK1921,flaD,JW1907,rpoF;locus_tag=b1922 NC_000913.3 RefSeq CDS 2001070 2001789 . - 0 ID=cds1911;Parent=gene1971;Dbxref=ASAP:ABE-0006396,UniProtKB/Swiss-Prot:P0AEM6,Genbank:NP_416432.3,EcoGene:EG11355,GeneID:948824;Name=NP_416432.3;Note=flagellar biosynthesis%3B alternative sigma factor 28%3B regulation of flagellar operons;gbkey=CDS;gene=fliA;product=RNA polymerase%2C sigma 28 (sigma F) factor;protein_id=NP_416432.3;transl_table=11 NC_000913.3 RefSeq repeat_region 2001968 2002066 . + . ID=id234;Note=RIP141 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2002110 2003606 . - . ID=gene1972;Dbxref=EcoGene:EG10321,GeneID:949101;Name=fliC;gbkey=Gene;gene=fliC;gene_biotype=protein_coding;gene_synonym=ECK1922,flaF,H,hag,JW1908;locus_tag=b1923 NC_000913.3 RefSeq CDS 2002110 2003606 . - 0 ID=cds1912;Parent=gene1972;Dbxref=ASAP:ABE-0006402,UniProtKB/Swiss-Prot:P04949,Genbank:NP_416433.1,EcoGene:EG10321,GeneID:949101;Name=NP_416433.1;Note=flagellar biosynthesis%3B flagellin%2C filament structural protein;gbkey=CDS;gene=fliC;product=flagellar filament structural protein (flagellin);protein_id=NP_416433.1;transl_table=11 NC_000913.3 RefSeq gene 2003872 2005278 . + . ID=gene1973;Dbxref=EcoGene:EG10841,GeneID:946428;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;gene_synonym=ECK1923,flbC,JW1909,rfs;locus_tag=b1924 NC_000913.3 RefSeq CDS 2003872 2005278 . + 0 ID=cds1913;Parent=gene1973;Dbxref=ASAP:ABE-0006407,UniProtKB/Swiss-Prot:P24216,Genbank:NP_416434.1,EcoGene:EG10841,GeneID:946428;Name=NP_416434.1;Note=flagellar biosynthesis%3B filament capping protein%3B enables filament assembly;gbkey=CDS;gene=fliD;product=flagellar filament capping protein;protein_id=NP_416434.1;transl_table=11 NC_000913.3 RefSeq gene 2005303 2005713 . + . ID=gene1974;Dbxref=EcoGene:EG11388,GeneID:946429;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;gene_synonym=ECK1924,JW1910;locus_tag=b1925 NC_000913.3 RefSeq CDS 2005303 2005713 . + 0 ID=cds1914;Parent=gene1974;Dbxref=ASAP:ABE-0006409,UniProtKB/Swiss-Prot:P26608,Genbank:NP_416435.1,EcoGene:EG11388,GeneID:946429;Name=NP_416435.1;Note=flagellar biosynthesis%3B repressor of class 3a and 3b operons (RflA activity);gbkey=CDS;gene=fliS;product=flagellar protein potentiates polymerization;protein_id=NP_416435.1;transl_table=11 NC_000913.3 RefSeq gene 2005713 2006078 . + . ID=gene1975;Dbxref=EcoGene:EG11389,GeneID:946433;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;gene_synonym=ECK1925,JW1911;locus_tag=b1926 NC_000913.3 RefSeq CDS 2005713 2006078 . + 0 ID=cds1915;Parent=gene1975;Dbxref=ASAP:ABE-0006411,UniProtKB/Swiss-Prot:P0ABY2,Genbank:NP_416436.1,EcoGene:EG11389,GeneID:946433;Name=NP_416436.1;Note=flagellar biosynthesis%3B repressor of class 3a and 3b operons (RflA activity);gbkey=CDS;gene=fliT;product=putative flagellar synthesis and assembly chaperone;protein_id=NP_416436.1;transl_table=11 NC_000913.3 RefSeq gene 2006156 2007643 . + . ID=gene1976;Dbxref=EcoGene:EG11387,GeneID:946434;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;gene_synonym=ECK1926,JW1912,yedC;locus_tag=b1927 NC_000913.3 RefSeq CDS 2006156 2007643 . + 0 ID=cds1916;Parent=gene1976;Dbxref=ASAP:ABE-0006414,UniProtKB/Swiss-Prot:P26612,Genbank:NP_416437.1,EcoGene:EG11387,GeneID:946434;Name=NP_416437.1;gbkey=CDS;gene=amyA;product=cytoplasmic alpha-amylase;protein_id=NP_416437.1;transl_table=11 NC_000913.3 RefSeq gene 2007677 2008090 . - . ID=gene1977;Dbxref=EcoGene:EG11659,GeneID:949082;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;gene_synonym=ECK1927,JW1913;locus_tag=b1928 NC_000913.3 RefSeq CDS 2007677 2008090 . - 0 ID=cds1917;Parent=gene1977;Dbxref=ASAP:ABE-0006416,UniProtKB/Swiss-Prot:P31063,Genbank:NP_416438.1,EcoGene:EG11659,GeneID:949082;Name=NP_416438.1;gbkey=CDS;gene=yedD;product=lipoprotein;protein_id=NP_416438.1;transl_table=11 NC_000913.3 RefSeq gene 2008277 2009482 . + . ID=gene1978;Dbxref=EcoGene:EG11660,GeneID:945192;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;gene_synonym=ECK1928,JW1914;locus_tag=b1929 NC_000913.3 RefSeq CDS 2008277 2009482 . + 0 ID=cds1918;Parent=gene1978;Dbxref=ASAP:ABE-0006422,UniProtKB/Swiss-Prot:P31064,Genbank:NP_416439.1,EcoGene:EG11660,GeneID:945192;Name=NP_416439.1;Note=putative transport system permease protein;gbkey=CDS;gene=yedE;product=UPF0394 family sulphur transport domain-containing inner membrane protein;protein_id=NP_416439.1;transl_table=11 NC_000913.3 RefSeq gene 2009479 2009712 . + . ID=gene1979;Dbxref=EcoGene:EG11661,GeneID:946909;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;gene_synonym=ECK1929,JW1915;locus_tag=b1930 NC_000913.3 RefSeq CDS 2009479 2009712 . + 0 ID=cds1919;Parent=gene1979;Dbxref=ASAP:ABE-0006425,UniProtKB/Swiss-Prot:P0AA31,Genbank:NP_416440.1,EcoGene:EG11661,GeneID:946909;Name=NP_416440.1;gbkey=CDS;gene=yedF;product=putative TusA family sulfurtransferase;protein_id=NP_416440.1;transl_table=11 NC_000913.3 RefSeq gene 2009821 2010489 . + . ID=gene1980;Dbxref=EcoGene:EG13278,GeneID:946435;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;gene_synonym=ECK1930,JW1916,yedG;locus_tag=b1931 NC_000913.3 RefSeq CDS 2009821 2010489 . + 0 ID=cds1920;Parent=gene1980;Dbxref=ASAP:ABE-0006428,UniProtKB/Swiss-Prot:P76318,Genbank:YP_025310.1,EcoGene:EG13278,GeneID:946435;Name=YP_025310.1;gbkey=CDS;gene=yedK;product=DUF159 family protein;protein_id=YP_025310.1;transl_table=11 NC_000913.3 RefSeq gene 2010600 2011079 . + . ID=gene1981;Dbxref=EcoGene:EG13279,GeneID:946437;Name=yedL;gbkey=Gene;gene=yedL;gene_biotype=protein_coding;gene_synonym=ECK1931,JW1917;locus_tag=b1932 NC_000913.3 RefSeq CDS 2010600 2011079 . + 0 ID=cds1921;Parent=gene1981;Dbxref=ASAP:ABE-0006433,UniProtKB/Swiss-Prot:P76319,Genbank:NP_416442.1,EcoGene:EG13279,GeneID:946437;Name=NP_416442.1;gbkey=CDS;gene=yedL;product=GNAT family putative N-acetyltransferase;protein_id=NP_416442.1;transl_table=11 NC_000913.3 RefSeq gene 2011223 2012351 . - . ID=gene1982;Dbxref=EcoGene:EG13281,GeneID:2847704;Name=yedN;gbkey=Gene;gene=yedN;gene_biotype=pseudogene;gene_synonym=ECK1932,JW1918,JW5912,yedM;locus_tag=b4495;pseudo=true NC_000913.3 RefSeq CDS 2012040 2012351 . - 0 ID=cds1922;Parent=gene1982;Dbxref=ASAP:ABE-0006435,ASAP:ABE-0006437,ASAP:ABE-0006440,ASAP:ABE-0285096,UniProtKB/Swiss-Prot:P76321,EcoGene:EG13281,GeneID:2847704;Note=pseudogene%2C IpaH/YopM family;gbkey=CDS;gene=yedN;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2011363 2012040 . - 0 ID=cds1922;Parent=gene1982;Dbxref=ASAP:ABE-0006435,ASAP:ABE-0006437,ASAP:ABE-0006440,ASAP:ABE-0285096,UniProtKB/Swiss-Prot:P76321,EcoGene:EG13281,GeneID:2847704;Note=pseudogene%2C IpaH/YopM family;gbkey=CDS;gene=yedN;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2011223 2011357 . - 0 ID=cds1922;Parent=gene1982;Dbxref=ASAP:ABE-0006435,ASAP:ABE-0006437,ASAP:ABE-0006440,ASAP:ABE-0285096,UniProtKB/Swiss-Prot:P76321,EcoGene:EG13281,GeneID:2847704;Note=pseudogene%2C IpaH/YopM family;gbkey=CDS;gene=yedN;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2012502 2012663 . + . ID=gene1983;Dbxref=EcoGene:EG14259,GeneID:946445;Name=intG;gbkey=Gene;gene=intG;gene_biotype=pseudogene;gene_synonym=ECK1934,JW5913;locus_tag=b1936;pseudo=true NC_000913.3 RefSeq CDS 2012502 2012663 . + 0 ID=cds1923;Parent=gene1983;Dbxref=ASAP:ABE-0006445,UniProtKB/Swiss-Prot:P76323,EcoGene:EG14259,GeneID:946445;Note=pseudogene%2C phage integrase family;gbkey=CDS;gene=intG;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2012700 2013014 . - . ID=gene1984;Dbxref=EcoGene:EG11346,GeneID:946446;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;gene_synonym=ECK1935,flaAI,flaN,JW1921;locus_tag=b1937 NC_000913.3 RefSeq CDS 2012700 2013014 . - 0 ID=cds1924;Parent=gene1984;Dbxref=ASAP:ABE-0006447,UniProtKB/Swiss-Prot:P0A8T5,Genbank:NP_416447.1,EcoGene:EG11346,GeneID:946446;Name=NP_416447.1;Note=flagellar biosynthesis%3B basal-body component%2C possibly at (MS-ring)-rod junction;gbkey=CDS;gene=fliE;product=flagellar basal-body component;protein_id=NP_416447.1;transl_table=11 NC_000913.3 RefSeq gene 2013229 2014887 . + . ID=gene1985;Dbxref=EcoGene:EG11347,GeneID:946448;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;gene_synonym=ECK1936,flaAII.1,flaBI,JW1922;locus_tag=b1938 NC_000913.3 RefSeq CDS 2013229 2014887 . + 0 ID=cds1925;Parent=gene1985;Dbxref=ASAP:ABE-0006454,UniProtKB/Swiss-Prot:P25798,Genbank:NP_416448.1,EcoGene:EG11347,GeneID:946448;Name=NP_416448.1;Note=flagellar biosynthesis%3B basal-body MS(membrane and supramembrane)-ring and collar protein;gbkey=CDS;gene=fliF;product=flagellar basal-body MS-ring and collar protein;protein_id=NP_416448.1;transl_table=11 NC_000913.3 RefSeq gene 2014880 2015875 . + . ID=gene1986;Dbxref=EcoGene:EG11654,GeneID:946451;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;gene_synonym=ECK1937,flaAII.2,flaBII,JW1923;locus_tag=b1939 NC_000913.3 RefSeq CDS 2014880 2015875 . + 0 ID=cds1926;Parent=gene1986;Dbxref=ASAP:ABE-0006456,UniProtKB/Swiss-Prot:P0ABZ1,Genbank:NP_416449.1,EcoGene:EG11654,GeneID:946451;Name=NP_416449.1;Note=flagellar biosynthesis%2C component of motor switching and energizing%2C enabling rotation and determining its direction;gbkey=CDS;gene=fliG;product=flagellar motor switching and energizing component;protein_id=NP_416449.1;transl_table=11 NC_000913.3 RefSeq gene 2015868 2016554 . + . ID=gene1987;Dbxref=EcoGene:EG11656,GeneID:946456;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;gene_synonym=ECK1938,flaAII.3,flaBIII,JW1924;locus_tag=b1940 NC_000913.3 RefSeq CDS 2015868 2016554 . + 0 ID=cds1927;Parent=gene1987;Dbxref=ASAP:ABE-0006458,UniProtKB/Swiss-Prot:P31068,Genbank:NP_416450.2,EcoGene:EG11656,GeneID:946456;Name=NP_416450.2;Note=flagellar biosynthesis%3B export of flagellar proteins?;gbkey=CDS;gene=fliH;product=negative regulator of FliI ATPase activity;protein_id=NP_416450.2;transl_table=11 NC_000913.3 RefSeq gene 2016554 2017927 . + . ID=gene1988;Dbxref=EcoGene:EG20266,GeneID:946457;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;gene_synonym=ECK1939,flaC,JW1925;locus_tag=b1941 NC_000913.3 RefSeq CDS 2016554 2017927 . + 0 ID=cds1928;Parent=gene1988;Dbxref=ASAP:ABE-0006460,UniProtKB/Swiss-Prot:P52612,Genbank:NP_416451.1,EcoGene:EG20266,GeneID:946457;Name=NP_416451.1;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=NP_416451.1;transl_table=11 NC_000913.3 RefSeq gene 2017946 2018389 . + . ID=gene1989;Dbxref=EcoGene:EG20267,GeneID:946454;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;gene_synonym=ECK1940,flaO,JW1926;locus_tag=b1942 NC_000913.3 RefSeq CDS 2017946 2018389 . + 0 ID=cds1929;Parent=gene1989;Dbxref=ASAP:ABE-0006462,UniProtKB/Swiss-Prot:P52613,Genbank:NP_416452.1,EcoGene:EG20267,GeneID:946454;Name=NP_416452.1;Note=flagellar fliJ protein;gbkey=CDS;gene=fliJ;product=flagellar protein;protein_id=NP_416452.1;transl_table=11 NC_000913.3 RefSeq gene 2018386 2019513 . + . ID=gene1990;Dbxref=EcoGene:EG20268,GeneID:946449;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;gene_synonym=ECK1941,flaE,JW1927;locus_tag=b1943 NC_000913.3 RefSeq CDS 2018386 2019513 . + 0 ID=cds1930;Parent=gene1990;Dbxref=ASAP:ABE-0006464,UniProtKB/Swiss-Prot:P52614,Genbank:NP_416453.1,EcoGene:EG20268,GeneID:946449;Name=NP_416453.1;gbkey=CDS;gene=fliK;product=flagellar hook-length control protein;protein_id=NP_416453.1;transl_table=11 NC_000913.3 RefSeq gene 2019618 2020082 . + . ID=gene1991;Dbxref=EcoGene:EG10322,GeneID:946443;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;gene_synonym=cheC1,ECK1942,flaAI,flaQI,JW1928;locus_tag=b1944 NC_000913.3 RefSeq CDS 2019618 2020082 . + 0 ID=cds1931;Parent=gene1991;Dbxref=ASAP:ABE-0006467,UniProtKB/Swiss-Prot:P0ABX8,Genbank:NP_416454.1,EcoGene:EG10322,GeneID:946443;Name=NP_416454.1;Note=flagellar biosynthesis;gbkey=CDS;gene=fliL;product=flagellar biosynthesis protein;protein_id=NP_416454.1;transl_table=11 NC_000913.3 RefSeq gene 2020087 2021091 . + . ID=gene1992;Dbxref=EcoGene:EG10323,GeneID:946442;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;gene_synonym=cheC2,ECK1943,flaA,flaAII,flaQII,JW1929;locus_tag=b1945 NC_000913.3 RefSeq CDS 2020087 2021091 . + 0 ID=cds1932;Parent=gene1992;Dbxref=ASAP:ABE-0006469,UniProtKB/Swiss-Prot:P06974,Genbank:NP_416455.1,EcoGene:EG10323,GeneID:946442;Name=NP_416455.1;Note=flagellar biosynthesis%2C component of motor switch and energizing%2C enabling rotation and determining its direction;gbkey=CDS;gene=fliM;product=flagellar motor switching and energizing component;protein_id=NP_416455.1;transl_table=11 NC_000913.3 RefSeq gene 2021088 2021501 . + . ID=gene1993;Dbxref=EcoGene:EG10324,GeneID:946423;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;gene_synonym=ECK1944,JW1930,motD;locus_tag=b1946 NC_000913.3 RefSeq CDS 2021088 2021501 . + 0 ID=cds1933;Parent=gene1993;Dbxref=ASAP:ABE-0006471,UniProtKB/Swiss-Prot:P15070,Genbank:NP_416456.1,EcoGene:EG10324,GeneID:946423;Name=NP_416456.1;Note=flagellar biosynthesis%2C component of motor switch and energizing%2C enabling rotation and determining its direction;gbkey=CDS;gene=fliN;product=flagellar motor switching and energizing component;protein_id=NP_416456.1;transl_table=11 NC_000913.3 RefSeq gene 2021504 2021869 . + . ID=gene1994;Dbxref=EcoGene:EG11224,GeneID:946458;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;gene_synonym=ECK1945,flbD,JW5316;locus_tag=b1947 NC_000913.3 RefSeq CDS 2021504 2021869 . + 0 ID=cds1934;Parent=gene1994;Dbxref=ASAP:ABE-0006473,UniProtKB/Swiss-Prot:P22586,Genbank:NP_416457.4,EcoGene:EG11224,GeneID:946458;Name=NP_416457.4;Note=flagellar biosynthesis;gbkey=CDS;gene=fliO;product=flagellar biosynthesis protein;protein_id=NP_416457.4;transl_table=11 NC_000913.3 RefSeq gene 2021869 2022606 . + . ID=gene1995;Dbxref=EcoGene:EG11975,GeneID:946462;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;gene_synonym=ECK1946,flaR,JW1932;locus_tag=b1948 NC_000913.3 RefSeq CDS 2021869 2022606 . + 0 ID=cds1935;Parent=gene1995;Dbxref=ASAP:ABE-0006475,UniProtKB/Swiss-Prot:P0AC05,Genbank:NP_416458.1,EcoGene:EG11975,GeneID:946462;Name=NP_416458.1;Note=flagellar biosynthesis;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein;protein_id=NP_416458.1;transl_table=11 NC_000913.3 RefSeq gene 2022616 2022885 . + . ID=gene1996;Dbxref=EcoGene:EG11976,GeneID:946463;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;gene_synonym=ECK1947,flaQ,JW1933;locus_tag=b1949 NC_000913.3 RefSeq CDS 2022616 2022885 . + 0 ID=cds1936;Parent=gene1996;Dbxref=ASAP:ABE-0006477,UniProtKB/Swiss-Prot:P0AC07,Genbank:NP_416459.1,EcoGene:EG11976,GeneID:946463;Name=NP_416459.1;Note=flagellar biosynthesis;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein;protein_id=NP_416459.1;transl_table=11 NC_000913.3 RefSeq gene 2022893 2023678 . + . ID=gene1997;Dbxref=EcoGene:EG11977,GeneID:946464;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;gene_synonym=ECK1948,flaP,JW1934;locus_tag=b1950 NC_000913.3 RefSeq CDS 2022893 2023678 . + 0 ID=cds1937;Parent=gene1997;Dbxref=ASAP:ABE-0006479,UniProtKB/Swiss-Prot:P33135,Genbank:NP_416460.1,EcoGene:EG11977,GeneID:946464;Name=NP_416460.1;Note=flagellar biosynthesis;gbkey=CDS;gene=fliR;product=flagellar export pore protein;protein_id=NP_416460.1;transl_table=11 NC_000913.3 RefSeq gene 2023968 2024591 . + . ID=gene1998;Dbxref=EcoGene:EG10820,GeneID:946467;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;gene_synonym=cpsR,ECK1949,JW1935;locus_tag=b1951 NC_000913.3 RefSeq CDS 2023968 2024591 . + 0 ID=cds1938;Parent=gene1998;Dbxref=ASAP:ABE-0006482,UniProtKB/Swiss-Prot:P69405,Genbank:NP_416461.1,EcoGene:EG10820,GeneID:946467;Name=NP_416461.1;Note=positive regulator for ctr capsule biosynthesis%2C positive transcription factor;gbkey=CDS;gene=rcsA;product=transcriptional regulator of colanic acid capsular biosynthesis;protein_id=NP_416461.1;transl_table=11 NC_000913.3 RefSeq gene 2024635 2024823 . - . ID=gene1999;Dbxref=EcoGene:EG12636,GeneID:946468;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;gene_synonym=ECK1950,JW1936;locus_tag=b1952 NC_000913.3 RefSeq CDS 2024635 2024823 . - 0 ID=cds1939;Parent=gene1999;Dbxref=ASAP:ABE-0006484,UniProtKB/Swiss-Prot:P0AEG8,Genbank:NP_416462.1,EcoGene:EG12636,GeneID:946468;Name=NP_416462.1;gbkey=CDS;gene=dsrB;product=uncharacterized protein;protein_id=NP_416462.1;transl_table=11 NC_000913.3 RefSeq gene 2024986 2025213 . + . ID=gene2000;Dbxref=EcoGene:EG14387,GeneID:946469;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;gene_synonym=ECK1951,JW5317;locus_tag=b1953 NC_000913.3 RefSeq CDS 2024986 2025213 . + 0 ID=cds1940;Parent=gene2000;Dbxref=ASAP:ABE-0006488,UniProtKB/Swiss-Prot:P64519,Genbank:NP_416463.4,EcoGene:EG14387,GeneID:946469;Name=NP_416463.4;gbkey=CDS;gene=yodD;product=uncharacterized protein;protein_id=NP_416463.4;transl_table=11 NC_000913.3 RefSeq gene 2025227 2025313 . - . ID=gene2001;Dbxref=EcoGene:EG31118,GeneID:946470;Name=dsrA;gbkey=Gene;gene=dsrA;gene_biotype=antisense_RNA;gene_synonym=ECK1952,IS095,JWR0036;locus_tag=b1954 NC_000913.3 RefSeq ncRNA 2025227 2025313 . - . ID=rna59;Parent=gene2001;Dbxref=ASAP:ABE-0006490,EcoGene:EG31118,GeneID:946470;Note=silencer of rcsA gene%2C interacts with rpoS translation%3B component of acid resistance regulatory circuit;gbkey=ncRNA;gene=dsrA;ncrna_class=antisense_RNA;product=sRNA antisense regulator enhances translation of RpoS%2C Hfq-dependent NC_000913.3 RefSeq exon 2025227 2025313 . - . ID=id235;Parent=rna59;Dbxref=ASAP:ABE-0006490,EcoGene:EG31118,GeneID:946470;Note=silencer of rcsA gene%2C interacts with rpoS translation%3B component of acid resistance regulatory circuit;gbkey=ncRNA;gene=dsrA;ncrna_class=antisense_RNA;product=sRNA antisense regulator enhances translation of RpoS%2C Hfq-dependent NC_000913.3 RefSeq gene 2025511 2026326 . + . ID=gene2002;Dbxref=EcoGene:EG14039,GeneID:946472;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;gene_synonym=ECK1953,JW1938;locus_tag=b1955 NC_000913.3 RefSeq CDS 2025511 2026326 . + 0 ID=cds1941;Parent=gene2002;Dbxref=ASAP:ABE-0006493,UniProtKB/Swiss-Prot:P76329,Genbank:NP_416464.1,EcoGene:EG14039,GeneID:946472;Name=NP_416464.1;gbkey=CDS;gene=yedP;product=putative mannosyl-3-phosphoglycerate phosphatase;protein_id=NP_416464.1;transl_table=11 NC_000913.3 RefSeq gene 2026323 2028017 . - . ID=gene2003;Dbxref=EcoGene:EG14040,GeneID:946471;Name=yedQ;gbkey=Gene;gene=yedQ;gene_biotype=protein_coding;gene_synonym=ECK1954,JW5832;locus_tag=b1956 NC_000913.3 RefSeq CDS 2026323 2028017 . - 0 ID=cds1942;Parent=gene2003;Dbxref=ASAP:ABE-0006495,UniProtKB/Swiss-Prot:P76330,Genbank:NP_416465.2,EcoGene:EG14040,GeneID:946471;Name=NP_416465.2;gbkey=CDS;gene=yedQ;product=putative membrane-anchored diguanylate cyclase;protein_id=NP_416465.2;transl_table=11 NC_000913.3 RefSeq gene 2028188 2028370 . - . ID=gene2004;Dbxref=EcoGene:EG14307,GeneID:946466;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;gene_synonym=ECK1955,JW1940;locus_tag=b1957 NC_000913.3 RefSeq CDS 2028188 2028370 . - 0 ID=cds1943;Parent=gene2004;Dbxref=ASAP:ABE-0006498,UniProtKB/Swiss-Prot:P64517,Genbank:NP_416466.1,EcoGene:EG14307,GeneID:946466;Name=NP_416466.1;gbkey=CDS;gene=yodC;product=uncharacterized protein;protein_id=NP_416466.1;transl_table=11 NC_000913.3 RefSeq gene 2028449 2029366 . - . ID=gene2005;Dbxref=EcoGene:EG12709,GeneID:946465;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;gene_synonym=ECK1956,JW1941;locus_tag=b1958 NC_000913.3 RefSeq CDS 2028449 2029366 . - 0 ID=cds1944;Parent=gene2005;Dbxref=ASAP:ABE-0006500,UniProtKB/Swiss-Prot:P46125,Genbank:NP_416467.1,EcoGene:EG12709,GeneID:946465;Name=NP_416467.1;gbkey=CDS;gene=yedI;product=DUF808 family inner membrane protein;protein_id=NP_416467.1;transl_table=11 NC_000913.3 RefSeq gene 2029539 2030459 . + . ID=gene2006;Dbxref=EcoGene:EG11141,GeneID:946461;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;gene_synonym=ECK1957,JW1942;locus_tag=b1959 NC_000913.3 RefSeq CDS 2029539 2030459 . + 0 ID=cds1945;Parent=gene2006;Dbxref=ASAP:ABE-0006505,UniProtKB/Swiss-Prot:P0AA70,Genbank:NP_416468.1,EcoGene:EG11141,GeneID:946461;Name=NP_416468.1;Note=putative transmembrane subunit;gbkey=CDS;gene=yedA;product=amino acid exporter for phenylalanine%2C threonine;protein_id=NP_416468.1;transl_table=11 NC_000913.3 RefSeq gene 2030448 2030918 . - . ID=gene2007;Dbxref=EcoGene:EG11068,GeneID:946476;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;gene_synonym=ECK1958,JW1943;locus_tag=b1960 NC_000913.3 RefSeq CDS 2030448 2030918 . - 0 ID=cds1946;Parent=gene2007;Dbxref=ASAP:ABE-0006507,UniProtKB/Swiss-Prot:P09184,Genbank:NP_416469.1,EcoGene:EG11068,GeneID:946476;Name=NP_416469.1;Note=DNA mismatch endonuclease%2C patch repair protein;gbkey=CDS;gene=vsr;product=DNA mismatch endonuclease of very short patch repair;protein_id=NP_416469.1;transl_table=11 NC_000913.3 RefSeq gene 2030899 2032317 . - . ID=gene2008;Dbxref=EcoGene:EG10211,GeneID:946479;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;gene_synonym=ECK1959,JW1944,mec;locus_tag=b1961 NC_000913.3 RefSeq CDS 2030899 2032317 . - 0 ID=cds1947;Parent=gene2008;Dbxref=ASAP:ABE-0006509,UniProtKB/Swiss-Prot:P0AED9,Genbank:NP_416470.1,EcoGene:EG10211,GeneID:946479;Name=NP_416470.1;gbkey=CDS;gene=dcm;product=DNA cytosine methyltransferase;protein_id=NP_416470.1;transl_table=11 NC_000913.3 RefSeq gene 2032384 2033079 . - . ID=gene2009;Dbxref=EcoGene:EG12710,GeneID:946478;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;gene_synonym=ECK1960,JW1945;locus_tag=b1962 NC_000913.3 RefSeq CDS 2032384 2033079 . - 0 ID=cds1948;Parent=gene2009;Dbxref=ASAP:ABE-0006512,UniProtKB/Swiss-Prot:P46144,Genbank:NP_416471.1,EcoGene:EG12710,GeneID:946478;Name=NP_416471.1;gbkey=CDS;gene=yedJ;product=putative HD superfamily phosphohydrolase;protein_id=NP_416471.1;transl_table=11 NC_000913.3 RefSeq gene 2033119 2033484 . - . ID=gene2010;Dbxref=EcoGene:EG14041,GeneID:946477;Name=yedR;gbkey=Gene;gene=yedR;gene_biotype=protein_coding;gene_synonym=ECK1961,JW1946;locus_tag=b1963 NC_000913.3 RefSeq CDS 2033119 2033484 . - 0 ID=cds1949;Parent=gene2010;Dbxref=ASAP:ABE-0006514,UniProtKB/Swiss-Prot:P76334,Genbank:NP_416472.2,EcoGene:EG14041,GeneID:946477;Name=NP_416472.2;gbkey=CDS;gene=yedR;product=inner membrane protein;protein_id=NP_416472.2;transl_table=11 NC_000913.3 RefSeq gene 2033649 2033739 . + . ID=gene2011;Dbxref=EcoGene:EG31170,GeneID:5061507;Name=rseX;gbkey=Gene;gene=rseX;gene_biotype=antisense_RNA;gene_synonym=ECK4412,IS96;locus_tag=b4603 NC_000913.3 RefSeq ncRNA 2033649 2033739 . + . ID=rna60;Parent=gene2011;Dbxref=EcoGene:EG31170,GeneID:5061507;gbkey=ncRNA;gene=rseX;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompA and ompC translation%2C Hfq-dependent NC_000913.3 RefSeq exon 2033649 2033739 . + . ID=id236;Parent=rna60;Dbxref=EcoGene:EG31170,GeneID:5061507;gbkey=ncRNA;gene=rseX;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompA and ompC translation%2C Hfq-dependent NC_000913.3 RefSeq gene 2034051 2035243 . + . ID=gene2012;Dbxref=EcoGene:EG14042,GeneID:2847763;Name=yedS;gbkey=Gene;gene=yedS;gene_biotype=pseudogene;gene_synonym=ECK1962,JW1948,JW1949,JW5319,yedT;locus_tag=b4496;pseudo=true NC_000913.3 RefSeq CDS 2034051 2034713 . + 0 ID=cds1950;Parent=gene2012;Dbxref=ASAP:ABE-0006518,ASAP:ABE-0006521,ASAP:ABE-0006526,ASAP:ABE-0285097,UniProtKB/Swiss-Prot:P76335,EcoGene:EG14042,GeneID:2847763;Note=pseudogene%2C outer membrane protein homology~putative outer membrane protein;gbkey=CDS;gene=yedS;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2034713 2035243 . + 0 ID=cds1950;Parent=gene2012;Dbxref=ASAP:ABE-0006518,ASAP:ABE-0006521,ASAP:ABE-0006526,ASAP:ABE-0285097,UniProtKB/Swiss-Prot:P76335,EcoGene:EG14042,GeneID:2847763;Note=pseudogene%2C outer membrane protein homology~putative outer membrane protein;gbkey=CDS;gene=yedS;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2035835 2036686 . + . ID=gene2013;Dbxref=EcoGene:EG11755,GeneID:946481;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;gene_synonym=ECK1963,gloC,JW1950,yedU,yzzC;locus_tag=b1967 NC_000913.3 RefSeq CDS 2035835 2036686 . + 0 ID=cds1951;Parent=gene2013;Dbxref=ASAP:ABE-0006529,UniProtKB/Swiss-Prot:P31658,Genbank:NP_416476.1,EcoGene:EG11755,GeneID:946481;Name=NP_416476.1;gbkey=CDS;gene=hchA;product=glyoxalase III and Hsp31 molecular chaperone;protein_id=NP_416476.1;transl_table=11 NC_000913.3 RefSeq gene 2036794 2038152 . - . ID=gene2014;Dbxref=EcoGene:EG14044,GeneID:946487;Name=yedV;gbkey=Gene;gene=yedV;gene_biotype=protein_coding;gene_synonym=ECK1964,JW1951;locus_tag=b1968 NC_000913.3 RefSeq CDS 2036794 2038152 . - 0 ID=cds1952;Parent=gene2014;Dbxref=ASAP:ABE-0006531,UniProtKB/Swiss-Prot:P76339,Genbank:NP_416477.1,EcoGene:EG14044,GeneID:946487;Name=NP_416477.1;Note=putative 2-component sensor protein;gbkey=CDS;gene=yedV;product=putative sensory kinase in two-component regulatory system with YedW;protein_id=NP_416477.1;transl_table=11 NC_000913.3 RefSeq gene 2038152 2038823 . - . ID=gene2015;Dbxref=EcoGene:EG14045,GeneID:946486;Name=yedW;gbkey=Gene;gene=yedW;gene_biotype=protein_coding;gene_synonym=ECK1965,JW5322;locus_tag=b1969 NC_000913.3 RefSeq CDS 2038152 2038823 . - 0 ID=cds1953;Parent=gene2015;Dbxref=ASAP:ABE-0006533,UniProtKB/Swiss-Prot:P76340,Genbank:NP_416478.2,EcoGene:EG14045,GeneID:946486;Name=NP_416478.2;Note=putative 2-component transcriptional regulator;gbkey=CDS;gene=yedW;product=response regulator family protein;protein_id=NP_416478.2;transl_table=11 NC_000913.3 RefSeq gene 2038956 2039369 . + . ID=gene2016;Dbxref=EcoGene:EG14046,GeneID:946485;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;gene_synonym=ECK1966,JW1953,yedX;locus_tag=b1970 NC_000913.3 RefSeq CDS 2038956 2039369 . + 0 ID=cds1954;Parent=gene2016;Dbxref=ASAP:ABE-0006537,UniProtKB/Swiss-Prot:P76341,Genbank:NP_416479.1,EcoGene:EG14046,GeneID:946485;Name=NP_416479.1;gbkey=CDS;gene=hiuH;product=hydroxyisourate hydrolase;protein_id=NP_416479.1;transl_table=11 NC_000913.3 RefSeq gene 2039478 2040482 . + . ID=gene2017;Dbxref=EcoGene:EG14047,GeneID:946484;Name=yedY;gbkey=Gene;gene=yedY;gene_biotype=protein_coding;gene_synonym=ECK1967,JW1954;locus_tag=b1971 NC_000913.3 RefSeq CDS 2039478 2040482 . + 0 ID=cds1955;Parent=gene2017;Dbxref=ASAP:ABE-0006540,UniProtKB/Swiss-Prot:P76342,Genbank:NP_416480.1,EcoGene:EG14047,GeneID:946484;Name=NP_416480.1;Note=putative reductase;gbkey=CDS;gene=yedY;product=membrane-anchored%2C periplasmic TMAO%2C DMSO reductase;protein_id=NP_416480.1;transl_table=11 NC_000913.3 RefSeq gene 2040483 2041118 . + . ID=gene2018;Dbxref=EcoGene:EG14048,GeneID:946483;Name=yedZ;gbkey=Gene;gene=yedZ;gene_biotype=protein_coding;gene_synonym=ECK1968,JW1955;locus_tag=b1972 NC_000913.3 RefSeq CDS 2040483 2041118 . + 0 ID=cds1956;Parent=gene2018;Dbxref=ASAP:ABE-0006542,UniProtKB/Swiss-Prot:P76343,Genbank:NP_416481.1,EcoGene:EG14048,GeneID:946483;Name=NP_416481.1;gbkey=CDS;gene=yedZ;product=inner membrane heme subunit for periplasmic YedYZ reductase;protein_id=NP_416481.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2041152 2041185 . + . ID=id237;Note=REP142 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2041375 2042025 . + . ID=gene2019;Dbxref=EcoGene:EG14049,GeneID:946480;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;gene_synonym=ECK1969,JW1956,yodA;locus_tag=b1973 NC_000913.3 RefSeq CDS 2041375 2042025 . + 0 ID=cds1957;Parent=gene2019;Dbxref=ASAP:ABE-0006546,UniProtKB/Swiss-Prot:P76344,Genbank:NP_416482.1,EcoGene:EG14049,GeneID:946480;Name=NP_416482.1;gbkey=CDS;gene=zinT;product=zinc and cadmium binding protein%2C periplasmic;protein_id=NP_416482.1;transl_table=11 NC_000913.3 RefSeq gene 2042368 2042898 . + . ID=gene2020;Dbxref=EcoGene:EG14050,GeneID:946491;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;gene_synonym=ECK1970,JW5323;locus_tag=b1974 NC_000913.3 RefSeq CDS 2042368 2042898 . + 0 ID=cds1958;Parent=gene2020;Dbxref=ASAP:ABE-0006552,UniProtKB/Swiss-Prot:P76345,Genbank:NP_416483.4,EcoGene:EG14050,GeneID:946491;Name=NP_416483.4;Note=cytochrome b561 homolog 1;gbkey=CDS;gene=yodB;product=cytochrome b561 homolog;protein_id=NP_416483.4;transl_table=11 NC_000913.3 RefSeq gene 2043468 2043557 . - . ID=gene2021;Dbxref=EcoGene:EG30094,GeneID:946492;Name=serU;gbkey=Gene;gene=serU;gene_biotype=tRNA;gene_synonym=ECK1971,ftsM,JWR0037,Su-1,su1,supD,supH;locus_tag=b1975 NC_000913.3 RefSeq tRNA 2043468 2043557 . - . ID=rna61;Parent=gene2021;Dbxref=ASAP:ABE-0006554,EcoGene:EG30094,GeneID:946492;Note=anticodon: CGA;gbkey=tRNA;gene=serU;product=tRNA-Ser NC_000913.3 RefSeq exon 2043468 2043557 . - . ID=id238;Parent=rna61;Dbxref=ASAP:ABE-0006554,EcoGene:EG30094,GeneID:946492;Note=anticodon: CGA;gbkey=tRNA;gene=serU;product=tRNA-Ser NC_000913.3 RefSeq gene 2043651 2044448 . + . ID=gene2022;Dbxref=EcoGene:EG13377,GeneID:946489;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;gene_synonym=ECK1972,JW1958,yeeI;locus_tag=b1976 NC_000913.3 RefSeq CDS 2043651 2044448 . + 0 ID=cds1959;Parent=gene2022;Dbxref=ASAP:ABE-0006558,UniProtKB/Swiss-Prot:P76346,Genbank:NP_416484.2,EcoGene:EG13377,GeneID:946489;Name=NP_416484.2;gbkey=CDS;gene=mtfA;product=anti-repressor for DgsA(Mlc);protein_id=NP_416484.2;transl_table=11 NC_000913.3 RefSeq gene 2044549 2044624 . + . ID=gene2023;Dbxref=EcoGene:EG30020,GeneID:946488;Name=asnT;gbkey=Gene;gene=asnT;gene_biotype=tRNA;gene_synonym=ECK1973,JWR0038;locus_tag=b1977 NC_000913.3 RefSeq tRNA 2044549 2044624 . + . ID=rna62;Parent=gene2023;Dbxref=ASAP:ABE-0006560,EcoGene:EG30020,GeneID:946488;Note=anticodon: GUU;gbkey=tRNA;gene=asnT;product=tRNA-Asn NC_000913.3 RefSeq exon 2044549 2044624 . + . ID=id239;Parent=rna62;Dbxref=ASAP:ABE-0006560,EcoGene:EG30020,GeneID:946488;Note=anticodon: GUU;gbkey=tRNA;gene=asnT;product=tRNA-Asn NC_000913.3 RefSeq gene 2044938 2052014 . + . ID=gene2024;Dbxref=EcoGene:EG13378,GeneID:946498;Name=yeeJ;gbkey=Gene;gene=yeeJ;gene_biotype=protein_coding;gene_synonym=ECK1974,JW5833;locus_tag=b1978 NC_000913.3 RefSeq CDS 2044938 2052014 . + 0 ID=cds1960;Parent=gene2024;Dbxref=ASAP:ABE-0006563,UniProtKB/Swiss-Prot:P76347,Genbank:NP_416485.4,EcoGene:EG13378,GeneID:946498;Name=NP_416485.4;Note=putative factor;gbkey=CDS;gene=yeeJ;product=putative adhesin;protein_id=NP_416485.4;transl_table=11 NC_000913.3 RefSeq gene 2052276 2053328 . - . ID=gene2025;Dbxref=EcoGene:EG13380,GeneID:2847764;Name=yeeL;gbkey=Gene;gene=yeeL;gene_biotype=pseudogene;gene_synonym=ECK1975,JW1961,JW5325,yeeK;locus_tag=b4497;pseudo=true NC_000913.3 RefSeq CDS 2052276 2053328 . - 0 ID=cds1961;Parent=gene2025;Dbxref=ASAP:ABE-0006565,ASAP:ABE-0006568,ASAP:ABE-0285098,UniProtKB/Swiss-Prot:P76349,EcoGene:EG13380,GeneID:2847764;Note=pseudogene%2C glycosyltransferase homology;gbkey=CDS;gene=yeeL;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2053643 2054959 . + . ID=gene2026;Dbxref=EcoGene:EG20205,GeneID:946495;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;gene_synonym=ECK1976,JW1962,yeeM;locus_tag=b1981 NC_000913.3 RefSeq CDS 2053643 2054959 . + 0 ID=cds1962;Parent=gene2026;Dbxref=ASAP:ABE-0006572,UniProtKB/Swiss-Prot:P76350,Genbank:NP_416488.1,EcoGene:EG20205,GeneID:946495;Name=NP_416488.1;gbkey=CDS;gene=shiA;product=shikimate transporter;protein_id=NP_416488.1;transl_table=11 NC_000913.3 RefSeq gene 2055061 2056515 . + . ID=gene2027;Dbxref=EcoGene:EG10039,GeneID:946508;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;gene_synonym=ECK1977,JW1963;locus_tag=b1982 NC_000913.3 RefSeq CDS 2055061 2056515 . + 0 ID=cds1963;Parent=gene2027;Dbxref=ASAP:ABE-0006579,UniProtKB/Swiss-Prot:P0AE12,Genbank:NP_416489.1,EcoGene:EG10039,GeneID:946508;Name=NP_416489.1;gbkey=CDS;gene=amn;product=AMP nucleosidase;protein_id=NP_416489.1;transl_table=11 NC_000913.3 RefSeq gene 2056858 2057574 . + . ID=gene2028;Dbxref=EcoGene:EG13382,GeneID:946493;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;gene_synonym=ECK1978,JW1964;locus_tag=b1983 NC_000913.3 RefSeq CDS 2056858 2057574 . + 0 ID=cds1964;Parent=gene2028;Dbxref=ASAP:ABE-0006582,UniProtKB/Swiss-Prot:P0A8A2,Genbank:NP_416490.1,EcoGene:EG13382,GeneID:946493;Name=NP_416490.1;gbkey=CDS;gene=yeeN;product=UPF0082 family protein;protein_id=NP_416490.1;transl_table=11 NC_000913.3 RefSeq gene 2058027 2058102 . - . ID=gene2029;Dbxref=EcoGene:EG31120,GeneID:946494;Name=asnW;gbkey=Gene;gene=asnW;gene_biotype=tRNA;gene_synonym=ECK1979,JWR0039;locus_tag=b1984 NC_000913.3 RefSeq tRNA 2058027 2058102 . - . ID=rna63;Parent=gene2029;Dbxref=ASAP:ABE-0006584,EcoGene:EG31120,GeneID:946494;Note=anticodon: GUU;gbkey=tRNA;gene=asnW;product=tRNA-Asn NC_000913.3 RefSeq exon 2058027 2058102 . - . ID=id240;Parent=rna63;Dbxref=ASAP:ABE-0006584,EcoGene:EG31120,GeneID:946494;Note=anticodon: GUU;gbkey=tRNA;gene=asnW;product=tRNA-Asn NC_000913.3 RefSeq gene 2058203 2059690 . - . ID=gene2030;Dbxref=EcoGene:EG13383,GeneID:946506;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;gene_synonym=ECK1980,JW1965;locus_tag=b1985 NC_000913.3 RefSeq CDS 2058203 2059690 . - 0 ID=cds1965;Parent=gene2030;Dbxref=ASAP:ABE-0006586,UniProtKB/Swiss-Prot:P76352,Genbank:NP_416491.2,EcoGene:EG13383,GeneID:946506;Name=NP_416491.2;gbkey=CDS;gene=yeeO;product=putative multdrug exporter%2C MATE family;protein_id=NP_416491.2;transl_table=11 NC_000913.3 RefSeq gene 2059851 2059926 . + . ID=gene2031;Dbxref=EcoGene:EG30021,GeneID:946503;Name=asnU;gbkey=Gene;gene=asnU;gene_biotype=tRNA;gene_synonym=ECK1981,JWR0040;locus_tag=b1986 NC_000913.3 RefSeq tRNA 2059851 2059926 . + . ID=rna64;Parent=gene2031;Dbxref=ASAP:ABE-0006588,EcoGene:EG30021,GeneID:946503;Note=anticodon: GUU;gbkey=tRNA;gene=asnU;product=tRNA-Asn NC_000913.3 RefSeq exon 2059851 2059926 . + . ID=id241;Parent=rna64;Dbxref=ASAP:ABE-0006588,EcoGene:EG30021,GeneID:946503;Note=anticodon: GUU;gbkey=tRNA;gene=asnU;product=tRNA-Asn NC_000913.3 RefSeq gene 2059964 2060914 . - . ID=gene2032;Dbxref=EcoGene:EG14264,GeneID:946502;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;gene_synonym=ECK1982,JW1966;locus_tag=b1987 NC_000913.3 RefSeq CDS 2059964 2060914 . - 0 ID=cds1966;Parent=gene2032;Dbxref=ASAP:ABE-0006590,UniProtKB/Swiss-Prot:Q47083,Genbank:NP_416492.1,EcoGene:EG14264,GeneID:946502;Name=NP_416492.1;Note=transcriptional regulator cys regulon%3B accessory regulatory circuit affecting cysM;gbkey=CDS;gene=cbl;product=ssuEADCB/tauABCD operon transcriptional activator;protein_id=NP_416492.1;transl_table=11 NC_000913.3 RefSeq gene 2061016 2061933 . - . ID=gene2033;Dbxref=EcoGene:EG14265,GeneID:946501;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;gene_synonym=ECK1983,JW1967;locus_tag=b1988 NC_000913.3 RefSeq CDS 2061016 2061933 . - 0 ID=cds1967;Parent=gene2033;Dbxref=ASAP:ABE-0006594,UniProtKB/Swiss-Prot:Q47005,Genbank:NP_416493.1,EcoGene:EG14265,GeneID:946501;Name=NP_416493.1;Note=nitrogen assimilation control protein;gbkey=CDS;gene=nac;product=nitrogen assimilation regulon transcriptional regulator%3B autorepressor;protein_id=NP_416493.1;transl_table=11 NC_000913.3 RefSeq gene 2062260 2062335 . + . ID=gene2034;Dbxref=EcoGene:EG30022,GeneID:946509;Name=asnV;gbkey=Gene;gene=asnV;gene_biotype=tRNA;gene_synonym=ECK1984,JWR0041;locus_tag=b1989 NC_000913.3 RefSeq tRNA 2062260 2062335 . + . ID=rna65;Parent=gene2034;Dbxref=ASAP:ABE-0006605,EcoGene:EG30022,GeneID:946509;Note=anticodon: GUU;gbkey=tRNA;gene=asnV;product=tRNA-Asn NC_000913.3 RefSeq exon 2062260 2062335 . + . ID=id242;Parent=rna65;Dbxref=ASAP:ABE-0006605,EcoGene:EG30022,GeneID:946509;Note=anticodon: GUU;gbkey=tRNA;gene=asnV;product=tRNA-Asn NC_000913.3 RefSeq gene 2062391 2063323 . - . ID=gene2035;Dbxref=EcoGene:EG12682,GeneID:945273;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;gene_synonym=ECK1985,erfK,JW1968,srfK,yeeG,yzzT;locus_tag=b1990 NC_000913.3 RefSeq CDS 2062391 2063323 . - 0 ID=cds1968;Parent=gene2035;Dbxref=ASAP:ABE-0006607,UniProtKB/Swiss-Prot:P39176,Genbank:NP_416494.1,EcoGene:EG12682,GeneID:945273;Name=NP_416494.1;gbkey=CDS;gene=ldtA;product=L%2CD-transpeptidase linking Lpp to murein;protein_id=NP_416494.1;transl_table=11 NC_000913.3 RefSeq gene 2063388 2064467 . - . ID=gene2036;Dbxref=EcoGene:EG12151,GeneID:946517;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;gene_synonym=ECK1986,JW1969;locus_tag=b1991 NC_000913.3 RefSeq CDS 2063388 2064467 . - 0 ID=cds1969;Parent=gene2036;Dbxref=ASAP:ABE-0006611,UniProtKB/Swiss-Prot:P36562,Genbank:NP_416495.1,EcoGene:EG12151,GeneID:946517;Name=NP_416495.1;gbkey=CDS;gene=cobT;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=NP_416495.1;transl_table=11 NC_000913.3 RefSeq gene 2064479 2065222 . - . ID=gene2037;Dbxref=EcoGene:EG12150,GeneID:946520;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;gene_synonym=ECK1987,JW1970;locus_tag=b1992 NC_000913.3 RefSeq CDS 2064479 2065222 . - 0 ID=cds1970;Parent=gene2037;Dbxref=ASAP:ABE-0006613,UniProtKB/Swiss-Prot:P36561,Genbank:NP_416496.1,EcoGene:EG12150,GeneID:946520;Name=NP_416496.1;gbkey=CDS;gene=cobS;product=cobalamin synthase;protein_id=NP_416496.1;transl_table=11 NC_000913.3 RefSeq gene 2065219 2065764 . - . ID=gene2038;Dbxref=EcoGene:EG13238,GeneID:946519;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;gene_synonym=ECK1988,JW1971;locus_tag=b1993 NC_000913.3 RefSeq CDS 2065219 2065764 . - 0 ID=cds1971;Parent=gene2038;Dbxref=ASAP:ABE-0006616,UniProtKB/Swiss-Prot:P0AE76,Genbank:NP_416497.1,EcoGene:EG13238,GeneID:946519;Name=NP_416497.1;Note=cobinamide kinase/cobinamide phosphate guanylyltransferase;gbkey=CDS;gene=cobU;product=cobinamide kinase and cobinamide phosphate guanylyltransferase;protein_id=NP_416497.1;transl_table=11 NC_000913.3 RefSeq gene 2066068 2066154 . - . ID=gene2039;Dbxref=EcoGene:EG13239,GeneID:5625565;Name=yeeH;gbkey=Gene;gene=yeeH;gene_biotype=pseudogene;gene_synonym=ECK4437;locus_tag=b4639;pseudo=true NC_000913.3 RefSeq CDS 2066068 2066154 . - 0 ID=cds1972;Parent=gene2039;Dbxref=EcoGene:EG13239,GeneID:5625565;Note=pseudogene;gbkey=CDS;gene=yeeH;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 2066159 2067353 . - . ID=id243;gbkey=mobile_element NC_000913.3 RefSeq gene 2066305 2067321 . - . ID=gene2040;Dbxref=EcoGene:EG40008,GeneID:946507;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b1994 NC_000913.3 RefSeq CDS 2066305 2067321 . - 0 ID=cds1973;Parent=gene2040;Dbxref=ASAP:ABE-0006619,UniProtKB/Swiss-Prot:P0CE53,Genbank:NP_416498.1,EcoGene:EG40008,GeneID:946507;Name=NP_416498.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_416498.1;transl_table=11 NC_000913.3 RefSeq region 2067354 2079031 . + . ID=id244;Note=cryptic prophage CP4-44;gbkey=misc_feature NC_000913.3 RefSeq gene 2067360 2067892 . - . ID=gene2041;Dbxref=EcoGene:EG14440,GeneID:5625566;Name=yoeG;gbkey=Gene;gene=yoeG;gene_biotype=pseudogene;gene_synonym=ECK4451;locus_tag=b4640;pseudo=true NC_000913.3 RefSeq CDS 2067458 2067892 . - 0 ID=cds1974;Parent=gene2041;Dbxref=EcoGene:EG14440,GeneID:5625566;Note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=yoeG;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2067360 2067458 . - 0 ID=cds1974;Parent=gene2041;Dbxref=EcoGene:EG14440,GeneID:5625566;Note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=yoeG;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2068261 2068419 . - . ID=gene2042;Dbxref=EcoGene:EG14441,GeneID:5625567;Name=yoeH;gbkey=Gene;gene=yoeH;gene_biotype=pseudogene;gene_synonym=ECK4452;locus_tag=b4641;pseudo=true NC_000913.3 RefSeq CDS 2068261 2068419 . - 0 ID=cds1975;Parent=gene2042;Dbxref=EcoGene:EG14441,GeneID:5625567;Note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=yoeH;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2068635 2068940 . + . ID=gene2043;Dbxref=EcoGene:EG14308,GeneID:4056042;Name=yoeA;gbkey=Gene;gene=yoeA;gene_biotype=pseudogene;gene_synonym=ECK1989,JW5326,yoeE;locus_tag=b4582;part=1/2;pseudo=true NC_000913.3 RefSeq gene 2070277 2070474 . + . ID=gene2043;Dbxref=EcoGene:EG14308,GeneID:4056042;Name=yoeA;gbkey=Gene;gene=yoeA;gene_biotype=pseudogene;gene_synonym=ECK1989,JW5326,yoeE;locus_tag=b4582;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 2068635 2068940 . + 0 ID=cds1976;Parent=gene2043;Dbxref=ASAP:ABE-0006626,ASAP:ABE-0006636,ASAP:ABE-0285114,UniProtKB/Swiss-Prot:P76356,EcoGene:EG14308,GeneID:4056042;Note=CP4-44 prophage%3B putative disrupted hemin or colicin receptor%3BPhage or Prophage Related~interrupted by IS2 and C-terminal deletion;gbkey=CDS;gene=yoeA;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2070277 2070474 . + 0 ID=cds1976;Parent=gene2043;Dbxref=ASAP:ABE-0006626,ASAP:ABE-0006636,ASAP:ABE-0285114,UniProtKB/Swiss-Prot:P76356,EcoGene:EG14308,GeneID:4056042;Note=CP4-44 prophage%3B putative disrupted hemin or colicin receptor%3BPhage or Prophage Related~interrupted by IS2 and C-terminal deletion;gbkey=CDS;gene=yoeA;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 2068941 2070271 . - . ID=id245;gbkey=mobile_element NC_000913.3 RefSeq gene 2068952 2069857 . - . ID=gene2044;Dbxref=EcoGene:EG40004,GeneID:946403;Name=insD1;gbkey=Gene;gene=insD1;gene_biotype=protein_coding;gene_synonym=ECK0358;locus_tag=b1996 NC_000913.3 RefSeq CDS 2068952 2069857 . - 0 ID=cds1977;Parent=gene2044;Dbxref=ASAP:ABE-0006629,UniProtKB/Swiss-Prot:P0CF55,Genbank:NP_416500.1,EcoGene:EG40004,GeneID:946403;Name=NP_416500.1;gbkey=CDS;gene=insD1;product=IS2 transposase TnpB;protein_id=NP_416500.1;transl_table=11 NC_000913.3 RefSeq gene 2069815 2070180 . - . ID=gene2045;Dbxref=EcoGene:EG40003,GeneID:946455;Name=insC1;gbkey=Gene;gene=insC1;gene_biotype=protein_coding;gene_synonym=ECK0357;locus_tag=b1997 NC_000913.3 RefSeq CDS 2069815 2070180 . - 0 ID=cds1978;Parent=gene2045;Dbxref=ASAP:ABE-0006631,UniProtKB/Swiss-Prot:P0CF42,Genbank:YP_026163.2,EcoGene:EG40003,GeneID:946455;Name=YP_026163.2;gbkey=CDS;gene=insC1;product=IS2 repressor TnpA;protein_id=YP_026163.2;transl_table=11 NC_000913.3 RefSeq gene 2070660 2071211 . + . ID=gene2046;Dbxref=EcoGene:EG13384,GeneID:946524;Name=yeeP;gbkey=Gene;gene=yeeP;gene_biotype=pseudogene;gene_synonym=ECK1991,JW5327;locus_tag=b1999;pseudo=true NC_000913.3 RefSeq CDS 2070660 2071211 . + 0 ID=cds1979;Parent=gene2046;Dbxref=ASAP:ABE-0006639,UniProtKB/Swiss-Prot:P76359,EcoGene:EG13384,GeneID:946524;Note=pseudogene%2C CP4-44 prophage%3B 50S ribosome-binding GTPase family%3BPhage or Prophage Related~putative histone;gbkey=CDS;gene=yeeP;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2071317 2071511 . + . ID=gene2047;Dbxref=EcoGene:EG31150,GeneID:2847691;Name=isrC;gbkey=Gene;gene=isrC;gene_biotype=ncRNA;gene_synonym=ECK1992,IS102,JWR0240;locus_tag=b4435 NC_000913.3 RefSeq ncRNA 2071317 2071511 . + . ID=rna66;Parent=gene2047;Dbxref=ASAP:ABE-0047255,EcoGene:EG31150,GeneID:2847691;Note=identified in a large scale screen;gbkey=ncRNA;gene=isrC;ncrna_class=other;product=novel sRNA%2C CP4-44%3B putative prophage remnant NC_000913.3 RefSeq exon 2071317 2071511 . + . ID=id246;Parent=rna66;Dbxref=ASAP:ABE-0047255,EcoGene:EG31150,GeneID:2847691;Note=identified in a large scale screen;gbkey=ncRNA;gene=isrC;ncrna_class=other;product=novel sRNA%2C CP4-44%3B putative prophage remnant NC_000913.3 RefSeq gene 2071539 2074658 . + . ID=gene2048;Dbxref=EcoGene:EG12686,GeneID:946540;Name=flu;gbkey=Gene;gene=flu;gene_biotype=protein_coding;gene_synonym=agn,agn43,ECK1993,JW1982,yeeQ,yzzX;locus_tag=b2000 NC_000913.3 RefSeq CDS 2071539 2074658 . + 0 ID=cds1980;Parent=gene2048;Dbxref=ASAP:ABE-0006642,UniProtKB/Swiss-Prot:P39180,Genbank:YP_026164.1,EcoGene:EG12686,GeneID:946540;Name=YP_026164.1;Note=antigen 43%2C phase-variable bipartite outer membrane fluffing protein;gbkey=CDS;gene=flu;product=CP4-44 prophage%3B antigen 43 (Ag43) phase-variable biofilm formation autotransporter;protein_id=YP_026164.1;transl_table=11 NC_000913.3 RefSeq gene 2074779 2076311 . + . ID=gene2049;Dbxref=EcoGene:EG13385,GeneID:946512;Name=yeeR;gbkey=Gene;gene=yeeR;gene_biotype=protein_coding;gene_synonym=ECK1994,JW1983;locus_tag=b2001 NC_000913.3 RefSeq CDS 2074779 2076311 . + 0 ID=cds1981;Parent=gene2049;Dbxref=ASAP:ABE-0006648,UniProtKB/Swiss-Prot:P76361,Genbank:NP_416505.2,EcoGene:EG13385,GeneID:946512;Name=NP_416505.2;gbkey=CDS;gene=yeeR;product=CP4-44 prophage%3B putative membrane protein;protein_id=NP_416505.2;transl_table=11 NC_000913.3 RefSeq gene 2076308 2076754 . + . ID=gene2050;Dbxref=EcoGene:EG13386,GeneID:946514;Name=yeeS;gbkey=Gene;gene=yeeS;gene_biotype=protein_coding;gene_synonym=ECK1995,JW1984;locus_tag=b2002 NC_000913.3 RefSeq CDS 2076308 2076754 . + 0 ID=cds1982;Parent=gene2050;Dbxref=ASAP:ABE-0006650,UniProtKB/Swiss-Prot:P76362,Genbank:NP_416506.1,EcoGene:EG13386,GeneID:946514;Name=NP_416506.1;Note=putative DNA repair protein%2C RADC family;gbkey=CDS;gene=yeeS;product=CP4-44 prophage%3B putative DNA repair protein;protein_id=NP_416506.1;transl_table=11 NC_000913.3 RefSeq gene 2076817 2077038 . + . ID=gene2051;Dbxref=EcoGene:EG13387,GeneID:946513;Name=yeeT;gbkey=Gene;gene=yeeT;gene_biotype=protein_coding;gene_synonym=ECK1996,JW1985;locus_tag=b2003 NC_000913.3 RefSeq CDS 2076817 2077038 . + 0 ID=cds1983;Parent=gene2051;Dbxref=ASAP:ABE-0006653,UniProtKB/Swiss-Prot:P64521,Genbank:NP_416507.1,EcoGene:EG13387,GeneID:946513;Name=NP_416507.1;gbkey=CDS;gene=yeeT;product=CP4-44 prophage%3B uncharacterized protein;protein_id=NP_416507.1;transl_table=11 NC_000913.3 RefSeq gene 2077112 2077480 . + . ID=gene2052;Dbxref=EcoGene:EG13388,GeneID:946510;Name=cbeA;gbkey=Gene;gene=cbeA;gene_biotype=protein_coding;gene_synonym=ECK1997,JW1986,yeeU;locus_tag=b2004 NC_000913.3 RefSeq CDS 2077112 2077480 . + 0 ID=cds1984;Parent=gene2052;Dbxref=ASAP:ABE-0006656,UniProtKB/Swiss-Prot:P76364,Genbank:NP_416508.1,EcoGene:EG13388,GeneID:946510;Name=NP_416508.1;Note=putative structural protein;gbkey=CDS;gene=cbeA;product=CP4-44 prophage%3B cytoskeleton bundling-enhancing factor A%3B CbtA antitoxin;protein_id=NP_416508.1;transl_table=11 NC_000913.3 RefSeq gene 2077569 2077943 . + . ID=gene2053;Dbxref=EcoGene:EG13389,GeneID:946534;Name=cbtA;gbkey=Gene;gene=cbtA;gene_biotype=protein_coding;gene_synonym=ECK1998,JW1987,yeeV;locus_tag=b2005 NC_000913.3 RefSeq CDS 2077569 2077943 . + 0 ID=cds1985;Parent=gene2053;Dbxref=ASAP:ABE-0006659,UniProtKB/Swiss-Prot:P64524,Genbank:NP_416509.1,EcoGene:EG13389,GeneID:946534;Name=NP_416509.1;gbkey=CDS;gene=cbtA;product=CP4-44 prophage%3B toxin of the YeeV-YeeU toxin-antitoxin system;protein_id=NP_416509.1;transl_table=11 NC_000913.3 RefSeq gene 2077940 2078107 . + . ID=gene2054;Dbxref=EcoGene:EG13390,GeneID:946535;Name=yeeW;gbkey=Gene;gene=yeeW;gene_biotype=pseudogene;gene_synonym=ECK1999,JW1988;locus_tag=b2006;pseudo=true NC_000913.3 RefSeq CDS 2077940 2078107 . + 0 ID=cds1986;Parent=gene2054;Dbxref=ASAP:ABE-0006661,UniProtKB/Swiss-Prot:P64526,EcoGene:EG13390,GeneID:946535;Note=CP4-44 prophage%3B uncharacterized protein%3BPhage or Prophage Related;gbkey=CDS;gene=yeeW;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2078549 2078677 . - . ID=gene2055;Dbxref=EcoGene:EG14362,GeneID:5625568;Name=yoeD;gbkey=Gene;gene=yoeD;gene_biotype=pseudogene;gene_synonym=ECK4443;locus_tag=b4642;pseudo=true NC_000913.3 RefSeq CDS 2078549 2078677 . - 0 ID=cds1987;Parent=gene2055;Dbxref=EcoGene:EG14362,GeneID:5625568;Note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=yoeD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2078746 2078931 . + . ID=gene2056;Dbxref=EcoGene:EG14425,GeneID:1450273;Name=yoeF;gbkey=Gene;gene=yoeF;gene_biotype=pseudogene;gene_synonym=ECK2000,JW5328;locus_tag=b4538;pseudo=true NC_000913.3 RefSeq CDS 2078746 2078931 . + 0 ID=cds1988;Parent=gene2056;Dbxref=ASAP:ABE-0285059,UniProtKB/Swiss-Prot:Q2EES3,EcoGene:EG14425,GeneID:1450273;Note=pseudogene%2C CP4-44 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=yoeF;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2079032 2079361 . - . ID=gene2057;Dbxref=EcoGene:EG13391,GeneID:946541;Name=yeeX;gbkey=Gene;gene=yeeX;gene_biotype=protein_coding;gene_synonym=ECK2001,JW1989;locus_tag=b2007 NC_000913.3 RefSeq CDS 2079032 2079361 . - 0 ID=cds1989;Parent=gene2057;Dbxref=ASAP:ABE-0006663,UniProtKB/Swiss-Prot:P0A8M6,Genbank:NP_416511.4,EcoGene:EG13391,GeneID:946541;Name=NP_416511.4;Note=putative alpha helix protein;gbkey=CDS;gene=yeeX;product=UPF0265 family protein;protein_id=NP_416511.4;transl_table=11 NC_000913.3 RefSeq gene 2079533 2080591 . - . ID=gene2058;Dbxref=EcoGene:EG11891,GeneID:946545;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;gene_synonym=ECK2002,JW1990;locus_tag=b2008 NC_000913.3 RefSeq CDS 2079533 2080591 . - 0 ID=cds1990;Parent=gene2058;Dbxref=ASAP:ABE-0006667,UniProtKB/Swiss-Prot:P33011,Genbank:NP_416512.1,EcoGene:EG11891,GeneID:946545;Name=NP_416512.1;gbkey=CDS;gene=yeeA;product=putative transporter%2C FUSC family inner membrane protein;protein_id=NP_416512.1;transl_table=11 NC_000913.3 RefSeq gene 2080789 2081262 . - . ID=gene2059;Dbxref=EcoGene:EG11892,GeneID:946546;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;gene_synonym=dgi,ECK2003,gyrI,JW1991,yeeB;locus_tag=b2009 NC_000913.3 RefSeq CDS 2080789 2081262 . - 0 ID=cds1991;Parent=gene2059;Dbxref=ASAP:ABE-0006670,UniProtKB/Swiss-Prot:P33012,Genbank:NP_416513.1,EcoGene:EG11892,GeneID:946546;Name=NP_416513.1;Note=SbmC protein;gbkey=CDS;gene=sbmC;product=DNA gyrase inhibitor;protein_id=NP_416513.1;transl_table=11 NC_000913.3 RefSeq gene 2081381 2082547 . - . ID=gene2060;Dbxref=EcoGene:EG11893,GeneID:946518;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;gene_synonym=ECK2004,JW5329,phsE,phsF,yeeC;locus_tag=b2010 NC_000913.3 RefSeq CDS 2081381 2082547 . - 0 ID=cds1992;Parent=gene2060;Dbxref=ASAP:ABE-0006680,UniProtKB/Swiss-Prot:P33013,Genbank:NP_416514.4,EcoGene:EG11893,GeneID:946518;Name=NP_416514.4;Note=penicillin binding protein 6b;gbkey=CDS;gene=dacD;product=D-alanyl-D-alanine carboxypeptidase%3B penicillin-binding protein 6b;protein_id=NP_416514.4;transl_table=11 NC_000913.3 RefSeq gene 2082756 2084183 . + . ID=gene2061;Dbxref=EcoGene:EG10926,GeneID:946529;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;gene_synonym=cpeA,ECK2005,JW1993,xonA;locus_tag=b2011 NC_000913.3 RefSeq CDS 2082756 2084183 . + 0 ID=cds1993;Parent=gene2061;Dbxref=ASAP:ABE-0006686,UniProtKB/Swiss-Prot:P04995,Genbank:NP_416515.1,EcoGene:EG10926,GeneID:946529;Name=NP_416515.1;Note=exonuclease I%2C 3' --> 5' specific%3B deoxyribophosphodiesterase;gbkey=CDS;gene=sbcB;product=exodeoxyribonuclease I%3B exonuclease I;protein_id=NP_416515.1;transl_table=11 NC_000913.3 RefSeq gene 2084226 2084453 . - . ID=gene2062;Dbxref=EcoGene:EG11894,GeneID:946539;Name=yeeD;gbkey=Gene;gene=yeeD;gene_biotype=protein_coding;gene_synonym=ECK2006,JW1994;locus_tag=b2012 NC_000913.3 RefSeq CDS 2084226 2084453 . - 0 ID=cds1994;Parent=gene2062;Dbxref=ASAP:ABE-0006688,UniProtKB/Swiss-Prot:P33014,Genbank:NP_416516.1,EcoGene:EG11894,GeneID:946539;Name=NP_416516.1;gbkey=CDS;gene=yeeD;product=putative TusA family sulfurtransferase;protein_id=NP_416516.1;transl_table=11 NC_000913.3 RefSeq gene 2084467 2085525 . - . ID=gene2063;Dbxref=EcoGene:EG11895,GeneID:946526;Name=yeeE;gbkey=Gene;gene=yeeE;gene_biotype=protein_coding;gene_synonym=ECK2007,JW1995;locus_tag=b2013 NC_000913.3 RefSeq CDS 2084467 2085525 . - 0 ID=cds1995;Parent=gene2063;Dbxref=ASAP:ABE-0006691,UniProtKB/Swiss-Prot:P33015,Genbank:NP_416517.1,EcoGene:EG11895,GeneID:946526;Name=NP_416517.1;Note=putative transport system permease protein;gbkey=CDS;gene=yeeE;product=UPF0394 family inner membrane protein;protein_id=NP_416517.1;transl_table=11 NC_000913.3 RefSeq gene 2085704 2087062 . - . ID=gene2064;Dbxref=EcoGene:EG11896,GeneID:946533;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;gene_synonym=ECK2008,JW5330,yeeF;locus_tag=b2014 NC_000913.3 RefSeq CDS 2085704 2087062 . - 0 ID=cds1996;Parent=gene2064;Dbxref=ASAP:ABE-0006696,UniProtKB/Swiss-Prot:P0AA47,Genbank:NP_416518.2,EcoGene:EG11896,GeneID:946533;Name=NP_416518.2;Note=putative amino acid/amine transport protein;gbkey=CDS;gene=plaP;product=putrescine importer%2C low affinity;protein_id=NP_416518.2;transl_table=11 NC_000913.3 RefSeq gene 2087052 2087114 . - . ID=gene2065;Dbxref=EcoGene:EG14483,GeneID:7751643;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;gene_synonym=ECK4493;locus_tag=b4678 NC_000913.3 RefSeq CDS 2087052 2087114 . - 0 ID=cds1997;Parent=gene2065;Dbxref=UniProtKB/Swiss-Prot:C1P606,Genbank:YP_002791246.1,EcoGene:EG14483,GeneID:7751643;Name=YP_002791246.1;gbkey=CDS;gene=yoeI;product=uncharacterized protein;protein_id=YP_002791246.1;transl_table=11 NC_000913.3 RefSeq gene 2087329 2088258 . - . ID=gene2066;Dbxref=EcoGene:EG13392,GeneID:946532;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;gene_synonym=ECK2009,JW5834;locus_tag=b2015 NC_000913.3 RefSeq CDS 2087329 2088258 . - 0 ID=cds1998;Parent=gene2066;Dbxref=ASAP:ABE-0006700,UniProtKB/Swiss-Prot:P76369,Genbank:NP_416519.4,EcoGene:EG13392,GeneID:946532;Name=NP_416519.4;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yeeY;product=LysR family putative transcriptional regulator;protein_id=NP_416519.4;transl_table=11 NC_000913.3 RefSeq gene 2088304 2089128 . - . ID=gene2067;Dbxref=EcoGene:EG13393,GeneID:946538;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;gene_synonym=ECK2010,JW1998;locus_tag=b2016 NC_000913.3 RefSeq CDS 2088304 2089128 . - 0 ID=cds1999;Parent=gene2067;Dbxref=ASAP:ABE-0006702,UniProtKB/Swiss-Prot:P0AD12,Genbank:NP_416520.1,EcoGene:EG13393,GeneID:946538;Name=NP_416520.1;Note=putative enzyme of sugar metabolism;gbkey=CDS;gene=yeeZ;product=putative epimerase;protein_id=NP_416520.1;transl_table=11 NC_000913.3 RefSeq gene 2089211 2089465 . - . ID=gene2068;Dbxref=EcoGene:EG14356,GeneID:1450274;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;gene_synonym=ECK2011,JW5331;locus_tag=b4539 NC_000913.3 RefSeq CDS 2089211 2089465 . - 0 ID=cds2000;Parent=gene2068;Dbxref=ASAP:ABE-0285060,UniProtKB/Swiss-Prot:P69348,Genbank:YP_588458.1,EcoGene:EG14356,GeneID:1450274;Name=YP_588458.1;gbkey=CDS;gene=yoeB;product=toxin of the YoeB-YefM toxin-antitoxin system;protein_id=YP_588458.1;transl_table=11 NC_000913.3 RefSeq gene 2089462 2089713 . - . ID=gene2069;Dbxref=EcoGene:EG12844,GeneID:946542;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;gene_synonym=ECK2012,JW5835;locus_tag=b2017 NC_000913.3 RefSeq CDS 2089462 2089713 . - 0 ID=cds2001;Parent=gene2069;Dbxref=ASAP:ABE-0006705,UniProtKB/Swiss-Prot:P69346,Genbank:NP_416521.2,EcoGene:EG12844,GeneID:946542;Name=NP_416521.2;gbkey=CDS;gene=yefM;product=antitoxin of the YoeB-YefM toxin-antitoxin system;protein_id=NP_416521.2;transl_table=11 NC_000913.3 RefSeq gene 2089996 2090046 . + . ID=gene2070;Dbxref=EcoGene:EG11269,GeneID:946547;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;gene_synonym=ECK2013,JW2000;locus_tag=b2018 NC_000913.3 RefSeq CDS 2089996 2090046 . + 0 ID=cds2002;Parent=gene2070;Dbxref=ASAP:ABE-0006710,UniProtKB/Swiss-Prot:P60995,Genbank:NP_416522.1,EcoGene:EG11269,GeneID:946547;Name=NP_416522.1;gbkey=CDS;gene=hisL;product=his operon leader peptide;protein_id=NP_416522.1;transl_table=11 NC_000913.3 RefSeq gene 2090192 2091091 . + . ID=gene2071;Dbxref=EcoGene:EG10449,GeneID:946549;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;gene_synonym=ECK2014,JW2001;locus_tag=b2019 NC_000913.3 RefSeq CDS 2090192 2091091 . + 0 ID=cds2003;Parent=gene2071;Dbxref=ASAP:ABE-0006713,UniProtKB/Swiss-Prot:P60757,Genbank:NP_416523.1,EcoGene:EG10449,GeneID:946549;Name=NP_416523.1;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=NP_416523.1;transl_table=11 NC_000913.3 RefSeq gene 2091097 2092401 . + . ID=gene2072;Dbxref=EcoGene:EG10447,GeneID:946531;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;gene_synonym=ECK2015,JW2002;locus_tag=b2020 NC_000913.3 RefSeq CDS 2091097 2092401 . + 0 ID=cds2004;Parent=gene2072;Dbxref=ASAP:ABE-0006715,UniProtKB/Swiss-Prot:P06988,Genbank:NP_416524.1,EcoGene:EG10447,GeneID:946531;Name=NP_416524.1;Note=L-histidinal:NAD+ oxidoreductase%3B L-histidinol:NAD+ oxidoreductase;gbkey=CDS;gene=hisD;product=bifunctional histidinal dehydrogenase/ histidinol dehydrogenase;protein_id=NP_416524.1;transl_table=11 NC_000913.3 RefSeq gene 2092398 2093468 . + . ID=gene2073;Dbxref=EcoGene:EG10446,GeneID:946551;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;gene_synonym=ECK2016,JW2003;locus_tag=b2021 NC_000913.3 RefSeq CDS 2092398 2093468 . + 0 ID=cds2005;Parent=gene2073;Dbxref=ASAP:ABE-0006717,UniProtKB/Swiss-Prot:P06986,Genbank:NP_416525.1,EcoGene:EG10446,GeneID:946551;Name=NP_416525.1;gbkey=CDS;gene=hisC;product=histidinol-phosphate aminotransferase;protein_id=NP_416525.1;transl_table=11 NC_000913.3 RefSeq gene 2093468 2094535 . + . ID=gene2074;Dbxref=EcoGene:EG10445,GeneID:946552;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;gene_synonym=ECK2017,JW2004;locus_tag=b2022 NC_000913.3 RefSeq CDS 2093468 2094535 . + 0 ID=cds2006;Parent=gene2074;Dbxref=ASAP:ABE-0006720,UniProtKB/Swiss-Prot:P06987,Genbank:NP_416526.4,EcoGene:EG10445,GeneID:946552;Name=NP_416526.4;Note=imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase;gbkey=CDS;gene=hisB;product=histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase;protein_id=NP_416526.4;transl_table=11 NC_000913.3 RefSeq gene 2094535 2095125 . + . ID=gene2075;Dbxref=EcoGene:EG10450,GeneID:946544;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;gene_synonym=ECK2018,JW2005;locus_tag=b2023 NC_000913.3 RefSeq CDS 2094535 2095125 . + 0 ID=cds2007;Parent=gene2075;Dbxref=ASAP:ABE-0006722,UniProtKB/Swiss-Prot:P60595,Genbank:NP_416527.1,EcoGene:EG10450,GeneID:946544;Name=NP_416527.1;Note=glutamine amidotransferase subunit of heterodimer with HisF %3D imidazole glycerol phosphate synthase holoenzyme;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit;protein_id=NP_416527.1;transl_table=11 NC_000913.3 RefSeq gene 2095125 2095862 . + . ID=gene2076;Dbxref=EcoGene:EG10444,GeneID:946521;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;gene_synonym=ECK2019,JW2006;locus_tag=b2024 NC_000913.3 RefSeq CDS 2095125 2095862 . + 0 ID=cds2008;Parent=gene2076;Dbxref=ASAP:ABE-0006725,UniProtKB/Swiss-Prot:P10371,Genbank:NP_416528.2,EcoGene:EG10444,GeneID:946521;Name=NP_416528.2;gbkey=CDS;gene=hisA;product=N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase;protein_id=NP_416528.2;transl_table=11 NC_000913.3 RefSeq gene 2095844 2096620 . + . ID=gene2077;Dbxref=EcoGene:EG10448,GeneID:946516;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;gene_synonym=ECK2020,JW2007;locus_tag=b2025 NC_000913.3 RefSeq CDS 2095844 2096620 . + 0 ID=cds2009;Parent=gene2077;Dbxref=ASAP:ABE-0006727,UniProtKB/Swiss-Prot:P60664,Genbank:NP_416529.1,EcoGene:EG10448,GeneID:946516;Name=NP_416529.1;Note=imidazole glycerol phosphate synthase subunit in heterodimer with HisH %3D imidazole glycerol phsphate synthase holoenzyme;gbkey=CDS;gene=hisF;product=imidazole glycerol phosphate synthase%2C catalytic subunit with HisH;protein_id=NP_416529.1;transl_table=11 NC_000913.3 RefSeq gene 2096614 2097225 . + . ID=gene2078;Dbxref=EcoGene:EG10451,GeneID:946515;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;gene_synonym=ECK2021,hisE,hisIE,JW2008;locus_tag=b2026 NC_000913.3 RefSeq CDS 2096614 2097225 . + 0 ID=cds2010;Parent=gene2078;Dbxref=ASAP:ABE-0006729,UniProtKB/Swiss-Prot:P06989,Genbank:NP_416530.1,EcoGene:EG10451,GeneID:946515;Name=NP_416530.1;Note=phosphoribosyl-amp cyclohydrolase%3B phosphoribosyl-ATP pyrophosphatase;gbkey=CDS;gene=hisI;product=phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase;protein_id=NP_416530.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2097237 2097266 . + . ID=id247;Note=REP143 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2097321 2098301 . - . ID=gene2079;Dbxref=EcoGene:EG13406,GeneID:946553;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;gene_synonym=cld,ECK2022,JW5836,rol,wzz;locus_tag=b2027 NC_000913.3 RefSeq CDS 2097321 2098301 . - 0 ID=cds2011;Parent=gene2079;Dbxref=ASAP:ABE-0006731,UniProtKB/Swiss-Prot:P76372,Genbank:NP_416531.4,EcoGene:EG13406,GeneID:946553;Name=NP_416531.4;gbkey=CDS;gene=wzzB;product=regulator of length of O-antigen component of lipopolysaccharide chains;protein_id=NP_416531.4;transl_table=11 NC_000913.3 RefSeq gene 2098447 2099613 . - . ID=gene2080;Dbxref=EcoGene:EG13407,GeneID:946571;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;gene_synonym=ECK2023,JW2010,pagA,pmrE,udg,yefA;locus_tag=b2028 NC_000913.3 RefSeq CDS 2098447 2099613 . - 0 ID=cds2012;Parent=gene2080;Dbxref=ASAP:ABE-0006734,UniProtKB/Swiss-Prot:P76373,Genbank:NP_416532.1,EcoGene:EG13407,GeneID:946571;Name=NP_416532.1;gbkey=CDS;gene=ugd;product=UDP-glucose 6-dehydrogenase;protein_id=NP_416532.1;transl_table=11 NC_000913.3 RefSeq gene 2099862 2101268 . - . ID=gene2081;Dbxref=EcoGene:EG10411,GeneID:946554;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;gene_synonym=ECK2024,JW2011;locus_tag=b2029 NC_000913.3 RefSeq CDS 2099862 2101268 . - 0 ID=cds2013;Parent=gene2081;Dbxref=ASAP:ABE-0006737,UniProtKB/Swiss-Prot:P00350,Genbank:NP_416533.1,EcoGene:EG10411,GeneID:946554;Name=NP_416533.1;gbkey=CDS;gene=gnd;product=6-phosphogluconate dehydrogenase%2C decarboxylating;protein_id=NP_416533.1;transl_table=11 NC_000913.3 RefSeq gene 2102944 2103389 . - . ID=gene2082;Dbxref=EcoGene:EG11986,GeneID:4056030;Name=wbbL;gbkey=Gene;gene=wbbL;gene_biotype=pseudogene;gene_synonym=ECK2025,JW2012,JW2016,yefJ;locus_tag=b4571;part=1/2;pseudo=true NC_000913.3 RefSeq gene 2101396 2101744 . - . ID=gene2082;Dbxref=EcoGene:EG11986,GeneID:4056030;Name=wbbL;gbkey=Gene;gene=wbbL;gene_biotype=pseudogene;gene_synonym=ECK2025,JW2012,JW2016,yefJ;locus_tag=b4571;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 2102944 2103389 . - 0 ID=cds2014;Parent=gene2082;Dbxref=ASAP:ABE-0006744,ASAP:ABE-0285061,ASAP:ABE-0285104,UniProtKB/Swiss-Prot:P36667,EcoGene:EG11986,GeneID:4056030;Note=pseudogene%2C lipopolysaccharide biosynthesis protein;gbkey=CDS;gene=wbbL;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2101396 2101744 . - 1 ID=cds2014;Parent=gene2082;Dbxref=ASAP:ABE-0006744,ASAP:ABE-0285061,ASAP:ABE-0285104,UniProtKB/Swiss-Prot:P36667,EcoGene:EG11986,GeneID:4056030;Note=pseudogene%2C lipopolysaccharide biosynthesis protein;gbkey=CDS;gene=wbbL;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 2101749 2102943 . - . ID=id248;gbkey=mobile_element NC_000913.3 RefSeq gene 2101895 2102911 . - . ID=gene2083;Dbxref=EcoGene:EG40008,GeneID:946577;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b2030 NC_000913.3 RefSeq CDS 2101895 2102911 . - 0 ID=cds2015;Parent=gene2083;Dbxref=ASAP:ABE-0006742,UniProtKB/Swiss-Prot:P0CE54,Genbank:NP_416535.1,EcoGene:EG40008,GeneID:946577;Name=NP_416535.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_416535.1;transl_table=11 NC_000913.3 RefSeq gene 2103391 2104509 . - . ID=gene2084;Dbxref=EcoGene:EG11985,GeneID:946555;Name=wbbK;gbkey=Gene;gene=wbbK;gene_biotype=protein_coding;gene_synonym=ECK2026,JW2017,yefI;locus_tag=b2032 NC_000913.3 RefSeq CDS 2103391 2104509 . - 0 ID=cds2016;Parent=gene2084;Dbxref=ASAP:ABE-0006747,UniProtKB/Swiss-Prot:P37751,Genbank:NP_416536.1,EcoGene:EG11985,GeneID:946555;Name=NP_416536.1;Note=putative glucose transferase;gbkey=CDS;gene=wbbK;product=lipopolysaccharide biosynthesis protein;protein_id=NP_416536.1;transl_table=11 NC_000913.3 RefSeq gene 2104494 2105084 . - . ID=gene2085;Dbxref=EcoGene:EG11984,GeneID:946556;Name=wbbJ;gbkey=Gene;gene=wbbJ;gene_biotype=protein_coding;gene_synonym=ECK2027,JW2018,yefH;locus_tag=b2033 NC_000913.3 RefSeq CDS 2104494 2105084 . - 0 ID=cds2017;Parent=gene2085;Dbxref=ASAP:ABE-0006749,UniProtKB/Swiss-Prot:P37750,Genbank:NP_416537.1,EcoGene:EG11984,GeneID:946556;Name=NP_416537.1;Note=putative O-acetyl transferase;gbkey=CDS;gene=wbbJ;product=putative lipopolysaccharide biosynthesis O-acetyl transferase;protein_id=NP_416537.1;transl_table=11 NC_000913.3 RefSeq gene 2105065 2106057 . - . ID=gene2086;Dbxref=EcoGene:EG11983,GeneID:947041;Name=wbbI;gbkey=Gene;gene=wbbI;gene_biotype=protein_coding;gene_synonym=ECK2028,JW2019,yefG;locus_tag=b2034 NC_000913.3 RefSeq CDS 2105065 2106057 . - 0 ID=cds2018;Parent=gene2086;Dbxref=ASAP:ABE-0006751,UniProtKB/Swiss-Prot:P37749,Genbank:NP_416538.1,EcoGene:EG11983,GeneID:947041;Name=NP_416538.1;Note=putative Galf transferase;gbkey=CDS;gene=wbbI;product=d-Galf:alpha-d-Glc beta-1%2C6-galactofuranosyltransferase;protein_id=NP_416538.1;transl_table=11 NC_000913.3 RefSeq gene 2106060 2107226 . - . ID=gene2087;Dbxref=EcoGene:EG11982,GeneID:945179;Name=wbbH;gbkey=Gene;gene=wbbH;gene_biotype=protein_coding;gene_synonym=ECK2029,JW2020,rfc,yefF;locus_tag=b2035 NC_000913.3 RefSeq CDS 2106060 2107226 . - 0 ID=cds2019;Parent=gene2087;Dbxref=ASAP:ABE-0006753,UniProtKB/Swiss-Prot:P37748,Genbank:NP_416539.1,EcoGene:EG11982,GeneID:945179;Name=NP_416539.1;gbkey=CDS;gene=wbbH;product=O-antigen polymerase;protein_id=NP_416539.1;transl_table=11 NC_000913.3 RefSeq gene 2107226 2108329 . - . ID=gene2088;Dbxref=EcoGene:EG11981,GeneID:945235;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;gene_synonym=ECK2030,JW2021,yefE;locus_tag=b2036 NC_000913.3 RefSeq CDS 2107226 2108329 . - 0 ID=cds2020;Parent=gene2088;Dbxref=ASAP:ABE-0006755,UniProtKB/Swiss-Prot:P37747,Genbank:NP_416540.1,EcoGene:EG11981,GeneID:945235;Name=NP_416540.1;Note=UDP-galactopyranose mutase;gbkey=CDS;gene=glf;product=UDP-galactopyranose mutase%2C FAD/NAD(P)-binding;protein_id=NP_416540.1;transl_table=11 NC_000913.3 RefSeq gene 2108337 2109584 . - . ID=gene2089;Dbxref=EcoGene:EG11980,GeneID:946557;Name=wzxB;gbkey=Gene;gene=wzxB;gene_biotype=protein_coding;gene_synonym=ECK2031,JW2022,rfbX,wzx;locus_tag=b2037 NC_000913.3 RefSeq CDS 2108337 2109584 . - 0 ID=cds2021;Parent=gene2089;Dbxref=ASAP:ABE-0006757,UniProtKB/Swiss-Prot:P37746,Genbank:NP_416541.1,EcoGene:EG11980,GeneID:946557;Name=NP_416541.1;Note=putative O-antigen transporter;gbkey=CDS;gene=wzxB;product=putative polisoprenol-linked O-antigen transporter;protein_id=NP_416541.1;transl_table=11 NC_000913.3 RefSeq gene 2109581 2110138 . - . ID=gene2090;Dbxref=EcoGene:EG11979,GeneID:947482;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;gene_synonym=ECK2032,JW2023,rfbD,rmlC;locus_tag=b2038 NC_000913.3 RefSeq CDS 2109581 2110138 . - 0 ID=cds2022;Parent=gene2090;Dbxref=ASAP:ABE-0006759,UniProtKB/Swiss-Prot:P37745,Genbank:NP_416542.1,EcoGene:EG11979,GeneID:947482;Name=NP_416542.1;Note=dTDP-6-deoxy-D-glucose-3%2C5 epimerase;gbkey=CDS;gene=rfbC;product=dTDP-4-deoxyrhamnose-3%2C5-epimerase;protein_id=NP_416542.1;transl_table=11 NC_000913.3 RefSeq gene 2110138 2111019 . - . ID=gene2091;Dbxref=EcoGene:EG11978,GeneID:945154;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;gene_synonym=ECK2033,JW2024,rmlA,som;locus_tag=b2039 NC_000913.3 RefSeq CDS 2110138 2111019 . - 0 ID=cds2023;Parent=gene2091;Dbxref=ASAP:ABE-0006762,UniProtKB/Swiss-Prot:P37744,Genbank:NP_416543.1,EcoGene:EG11978,GeneID:945154;Name=NP_416543.1;Note=dTDP-glucose pyrophosphorylase;gbkey=CDS;gene=rfbA;product=glucose-1-phosphate thymidylyltransferase;protein_id=NP_416543.1;transl_table=11 NC_000913.3 RefSeq gene 2111077 2111976 . - . ID=gene2092;Dbxref=EcoGene:EG12411,GeneID:947117;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;gene_synonym=ECK2034,JW2025,rmlD;locus_tag=b2040 NC_000913.3 RefSeq CDS 2111077 2111976 . - 0 ID=cds2024;Parent=gene2092;Dbxref=ASAP:ABE-0006764,UniProtKB/Swiss-Prot:P37760,Genbank:NP_416544.1,EcoGene:EG12411,GeneID:947117;Name=NP_416544.1;Note=dTDP-6-deoxy-L-mannose-dehydrogenase;gbkey=CDS;gene=rfbD;product=dTDP-L-rhamnose synthase%2C NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit;protein_id=NP_416544.1;transl_table=11 NC_000913.3 RefSeq gene 2111976 2113061 . - . ID=gene2093;Dbxref=EcoGene:EG12412,GeneID:945276;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;gene_synonym=ECK2035,JW2026,rmlB,som;locus_tag=b2041 NC_000913.3 RefSeq CDS 2111976 2113061 . - 0 ID=cds2025;Parent=gene2093;Dbxref=ASAP:ABE-0006766,UniProtKB/Swiss-Prot:P37759,Genbank:NP_416545.1,EcoGene:EG12412,GeneID:945276;Name=NP_416545.1;Note=dTDP-glucose 4%2C6 dehydratase;gbkey=CDS;gene=rfbB;product=dTDP-glucose 4%2C6 dehydratase%2C NAD(P)-binding;protein_id=NP_416545.1;transl_table=11 NC_000913.3 RefSeq gene 2113434 2114327 . - . ID=gene2094;Dbxref=EcoGene:EG13578,GeneID:946560;Name=wcaN;gbkey=Gene;gene=wcaN;gene_biotype=protein_coding;gene_synonym=ECK2036,galF,JW2027;locus_tag=b2042 NC_000913.3 RefSeq CDS 2113434 2114327 . - 0 ID=cds2026;Parent=gene2094;Dbxref=ASAP:ABE-0006771,UniProtKB/Swiss-Prot:P0AAB6,Genbank:NP_416546.1,EcoGene:EG13578,GeneID:946560;Name=NP_416546.1;gbkey=CDS;gene=wcaN;product=putative regulatory subunit for GalU;protein_id=NP_416546.1;transl_table=11 NC_000913.3 RefSeq gene 2114502 2115896 . - . ID=gene2095;Dbxref=EcoGene:EG12651,GeneID:946561;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;gene_synonym=ECK2037,JW2028,yefK;locus_tag=b2043 NC_000913.3 RefSeq CDS 2114502 2115896 . - 0 ID=cds2027;Parent=gene2095;Dbxref=ASAP:ABE-0006774,UniProtKB/Swiss-Prot:P71244,Genbank:NP_416547.1,EcoGene:EG12651,GeneID:946561;Name=NP_416547.1;Note=putative colanic acid biosynthesis protein;gbkey=CDS;gene=wcaM;product=colanic acid biosynthesis protein;protein_id=NP_416547.1;transl_table=11 NC_000913.3 RefSeq gene 2115907 2117127 . - . ID=gene2096;Dbxref=EcoGene:EG12652,GeneID:946565;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;gene_synonym=ECK2038,JW2029,yefL;locus_tag=b2044 NC_000913.3 RefSeq CDS 2115907 2117127 . - 0 ID=cds2028;Parent=gene2096;Dbxref=ASAP:ABE-0006777,UniProtKB/Swiss-Prot:P71243,Genbank:NP_416548.1,EcoGene:EG12652,GeneID:946565;Name=NP_416548.1;Note=putative colanic acid biosynthesis glycosyl transferase;gbkey=CDS;gene=wcaL;product=putative glycosyl transferase;protein_id=NP_416548.1;transl_table=11 NC_000913.3 RefSeq gene 2117124 2118404 . - . ID=gene2097;Dbxref=EcoGene:EG13577,GeneID:946569;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;gene_synonym=ECK2039,JW2030;locus_tag=b2045 NC_000913.3 RefSeq CDS 2117124 2118404 . - 0 ID=cds2029;Parent=gene2097;Dbxref=ASAP:ABE-0006780,UniProtKB/Swiss-Prot:P71242,Genbank:NP_416549.1,EcoGene:EG13577,GeneID:946569;Name=NP_416549.1;Note=putative galactokinase;gbkey=CDS;gene=wcaK;product=colanic acid biosynthesis protein;protein_id=NP_416549.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2118466 2118651 . + . ID=id249;Note=REP144 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2118680 2120158 . - . ID=gene2098;Dbxref=EcoGene:EG13576,GeneID:946581;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;gene_synonym=ECK2040,JW2031,wzx;locus_tag=b2046 NC_000913.3 RefSeq CDS 2118680 2120158 . - 0 ID=cds2030;Parent=gene2098;Dbxref=ASAP:ABE-0006783,UniProtKB/Swiss-Prot:P77377,Genbank:NP_416550.1,EcoGene:EG13576,GeneID:946581;Name=NP_416550.1;Note=probable export protein;gbkey=CDS;gene=wzxC;product=putative colanic acid exporter;protein_id=NP_416550.1;transl_table=11 NC_000913.3 RefSeq gene 2120160 2121554 . - . ID=gene2099;Dbxref=EcoGene:EG13575,GeneID:946583;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;gene_synonym=ECK2041,JW2032;locus_tag=b2047 NC_000913.3 RefSeq CDS 2120160 2121554 . - 0 ID=cds2031;Parent=gene2099;Dbxref=ASAP:ABE-0006785,UniProtKB/Swiss-Prot:P71241,Genbank:NP_416551.1,EcoGene:EG13575,GeneID:946583;Name=NP_416551.1;Note=putative UDP-glucose lipid carrier transferase;gbkey=CDS;gene=wcaJ;product=colanic biosynthesis UDP-glucose lipid carrier transferase;protein_id=NP_416551.1;transl_table=11 NC_000913.3 RefSeq gene 2121609 2122979 . - . ID=gene2100;Dbxref=EcoGene:EG10162,GeneID:946574;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=ECK2042,JW2033,manB,rfbK;locus_tag=b2048 NC_000913.3 RefSeq CDS 2121609 2122979 . - 0 ID=cds2032;Parent=gene2100;Dbxref=ASAP:ABE-0006788,UniProtKB/Swiss-Prot:P24175,Genbank:NP_416552.1,EcoGene:EG10162,GeneID:946574;Name=NP_416552.1;gbkey=CDS;gene=cpsG;product=phosphomannomutase;protein_id=NP_416552.1;transl_table=11 NC_000913.3 RefSeq gene 2123084 2124520 . - . ID=gene2101;Dbxref=EcoGene:EG10161,GeneID:946580;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;gene_synonym=ECK2043,JW2034,manC,mni,rfbM;locus_tag=b2049 NC_000913.3 RefSeq CDS 2123084 2124520 . - 0 ID=cds2033;Parent=gene2101;Dbxref=ASAP:ABE-0006791,UniProtKB/Swiss-Prot:P24174,Genbank:NP_416553.1,EcoGene:EG10161,GeneID:946580;Name=NP_416553.1;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;protein_id=NP_416553.1;transl_table=11 NC_000913.3 RefSeq gene 2124523 2125746 . - . ID=gene2102;Dbxref=EcoGene:EG11790,GeneID:946588;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;gene_synonym=ECK2044,JW2035,yefD;locus_tag=b2050 NC_000913.3 RefSeq CDS 2124523 2125746 . - 0 ID=cds2034;Parent=gene2102;Dbxref=ASAP:ABE-0006794,UniProtKB/Swiss-Prot:P32057,Genbank:NP_416554.1,EcoGene:EG11790,GeneID:946588;Name=NP_416554.1;Note=putative colanic biosynthesis glycosyl transferase;gbkey=CDS;gene=wcaI;product=putative glycosyl transferase;protein_id=NP_416554.1;transl_table=11 NC_000913.3 RefSeq gene 2125743 2126222 . - . ID=gene2103;Dbxref=EcoGene:EG11789,GeneID:946559;Name=wcaH;gbkey=Gene;gene=wcaH;gene_biotype=protein_coding;gene_synonym=ECK2045,gmm,JW5335,nudD,yefC;locus_tag=b2051 NC_000913.3 RefSeq CDS 2125743 2126222 . - 0 ID=cds2035;Parent=gene2103;Dbxref=ASAP:ABE-0006796,UniProtKB/Swiss-Prot:P32056,Genbank:NP_416555.2,EcoGene:EG11789,GeneID:946559;Name=NP_416555.2;gbkey=CDS;gene=wcaH;product=GDP-mannose mannosyl hydrolase;protein_id=NP_416555.2;transl_table=11 NC_000913.3 RefSeq gene 2126225 2127190 . - . ID=gene2104;Dbxref=EcoGene:EG11788,GeneID:946563;Name=wcaG;gbkey=Gene;gene=wcaG;gene_biotype=protein_coding;gene_synonym=ECK2046,fcl,JW2037,yefB;locus_tag=b2052 NC_000913.3 RefSeq CDS 2126225 2127190 . - 0 ID=cds2036;Parent=gene2104;Dbxref=ASAP:ABE-0006801,UniProtKB/Swiss-Prot:P32055,Genbank:NP_416556.1,EcoGene:EG11788,GeneID:946563;Name=NP_416556.1;gbkey=CDS;gene=wcaG;product=bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase;protein_id=NP_416556.1;transl_table=11 NC_000913.3 RefSeq gene 2127193 2128314 . - . ID=gene2105;Dbxref=EcoGene:EG11787,GeneID:946562;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;gene_synonym=ECK2047,JW2038,yefA,yefN;locus_tag=b2053 NC_000913.3 RefSeq CDS 2127193 2128314 . - 0 ID=cds2037;Parent=gene2105;Dbxref=ASAP:ABE-0006803,UniProtKB/Swiss-Prot:P0AC88,Genbank:NP_416557.1,EcoGene:EG11787,GeneID:946562;Name=NP_416557.1;gbkey=CDS;gene=gmd;product=GDP-D-mannose dehydratase%2C NAD(P)-binding;protein_id=NP_416557.1;transl_table=11 NC_000913.3 RefSeq gene 2128340 2128888 . - . ID=gene2106;Dbxref=EcoGene:EG13574,GeneID:946578;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;gene_synonym=ECK2048,JW2039;locus_tag=b2054 NC_000913.3 RefSeq CDS 2128340 2128888 . - 0 ID=cds2038;Parent=gene2106;Dbxref=ASAP:ABE-0006805,UniProtKB/Swiss-Prot:P0ACD2,Genbank:NP_416558.1,EcoGene:EG13574,GeneID:946578;Name=NP_416558.1;Note=putative transferase;gbkey=CDS;gene=wcaF;product=putative acyl transferase;protein_id=NP_416558.1;transl_table=11 NC_000913.3 RefSeq gene 2128904 2129650 . - . ID=gene2107;Dbxref=EcoGene:EG13573,GeneID:946543;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;gene_synonym=ECK2049,JW2040;locus_tag=b2055 NC_000913.3 RefSeq CDS 2128904 2129650 . - 0 ID=cds2039;Parent=gene2107;Dbxref=ASAP:ABE-0006807,UniProtKB/Swiss-Prot:P71239,Genbank:NP_416559.1,EcoGene:EG13573,GeneID:946543;Name=NP_416559.1;Note=putative colanic acid biosynthesis glycosyl transferase;gbkey=CDS;gene=wcaE;product=putative glycosyl transferase;protein_id=NP_416559.1;transl_table=11 NC_000913.3 RefSeq gene 2129661 2130878 . - . ID=gene2108;Dbxref=EcoGene:EG13572,GeneID:946550;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;gene_synonym=ECK2050,JW2041;locus_tag=b2056 NC_000913.3 RefSeq CDS 2129661 2130878 . - 0 ID=cds2040;Parent=gene2108;Dbxref=ASAP:ABE-0006809,UniProtKB/Swiss-Prot:P71238,Genbank:NP_416560.1,EcoGene:EG13572,GeneID:946550;Name=NP_416560.1;Note=putative colanic acid polymerase;gbkey=CDS;gene=wcaD;product=putative colanic acid polymerase;protein_id=NP_416560.1;transl_table=11 NC_000913.3 RefSeq gene 2130853 2132070 . - . ID=gene2109;Dbxref=EcoGene:EG13571,GeneID:946579;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;gene_synonym=ECK2051,JW2042;locus_tag=b2057 NC_000913.3 RefSeq CDS 2130853 2132070 . - 0 ID=cds2041;Parent=gene2109;Dbxref=ASAP:ABE-0006811,UniProtKB/Swiss-Prot:P71237,Genbank:NP_416561.1,EcoGene:EG13571,GeneID:946579;Name=NP_416561.1;Note=putative glycosyl transferase;gbkey=CDS;gene=wcaC;product=putative glycosyl transferase;protein_id=NP_416561.1;transl_table=11 NC_000913.3 RefSeq gene 2132067 2132555 . - . ID=gene2110;Dbxref=EcoGene:EG13570,GeneID:946573;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;gene_synonym=ECK2052,JW2043;locus_tag=b2058 NC_000913.3 RefSeq CDS 2132067 2132555 . - 0 ID=cds2042;Parent=gene2110;Dbxref=ASAP:ABE-0006813,UniProtKB/Swiss-Prot:P0ACC9,Genbank:NP_416562.1,EcoGene:EG13570,GeneID:946573;Name=NP_416562.1;Note=putative transferase;gbkey=CDS;gene=wcaB;product=putative acyl transferase;protein_id=NP_416562.1;transl_table=11 NC_000913.3 RefSeq gene 2132558 2133397 . - . ID=gene2111;Dbxref=EcoGene:EG13569,GeneID:946570;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;gene_synonym=ECK2053,JW2044;locus_tag=b2059 NC_000913.3 RefSeq CDS 2132558 2133397 . - 0 ID=cds2043;Parent=gene2111;Dbxref=ASAP:ABE-0006816,UniProtKB/Swiss-Prot:P77414,Genbank:NP_416563.1,EcoGene:EG13569,GeneID:946570;Name=NP_416563.1;Note=putative regulator;gbkey=CDS;gene=wcaA;product=putative glycosyl transferase;protein_id=NP_416563.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2133432 2133465 . + . ID=id250;Note=REP145 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2133490 2135652 . - . ID=gene2112;Dbxref=EcoGene:EG13568,GeneID:946567;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;gene_synonym=ECK2054,JW2045;locus_tag=b2060 NC_000913.3 RefSeq CDS 2133490 2135652 . - 0 ID=cds2044;Parent=gene2112;Dbxref=ASAP:ABE-0006819,UniProtKB/Swiss-Prot:P76387,Genbank:NP_416564.4,EcoGene:EG13568,GeneID:946567;Name=NP_416564.4;gbkey=CDS;gene=wzc;product=colanic acid production tyrosine-protein kinase%3B autokinase%3B Ugd phosphorylase;protein_id=NP_416564.4;transl_table=11 NC_000913.3 RefSeq gene 2135655 2136098 . - . ID=gene2113;Dbxref=EcoGene:EG13567,GeneID:946564;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;gene_synonym=ECK2055,JW2046;locus_tag=b2061 NC_000913.3 RefSeq CDS 2135655 2136098 . - 0 ID=cds2045;Parent=gene2113;Dbxref=ASAP:ABE-0006822,UniProtKB/Swiss-Prot:P0AAB2,Genbank:NP_416565.1,EcoGene:EG13567,GeneID:946564;Name=NP_416565.1;Note=low molecular weight protein-tyrosine-phosphatase;gbkey=CDS;gene=wzb;product=colanic acid production protein-tyrosine-phosphatase%3B Wzc-P dephosphorylase;protein_id=NP_416565.1;transl_table=11 NC_000913.3 RefSeq gene 2136104 2137243 . - . ID=gene2114;Dbxref=EcoGene:EG13566,GeneID:946558;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;gene_synonym=ECK2056,JW2047;locus_tag=b2062 NC_000913.3 RefSeq CDS 2136104 2137243 . - 0 ID=cds2046;Parent=gene2114;Dbxref=ASAP:ABE-0006825,UniProtKB/Swiss-Prot:P0A930,Genbank:NP_416566.1,EcoGene:EG13566,GeneID:946558;Name=NP_416566.1;Note=putative polysaccharide export protein;gbkey=CDS;gene=wza;product=colanic acid export protein%3B outer membrane auxillary lipoprotein;protein_id=NP_416566.1;transl_table=11 NC_000913.3 RefSeq gene 2137902 2139485 . + . ID=gene2115;Dbxref=EcoGene:EG14051,GeneID:946566;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;gene_synonym=ECK2057,JW5336;locus_tag=b2063 NC_000913.3 RefSeq CDS 2137902 2139485 . + 0 ID=cds2047;Parent=gene2115;Dbxref=ASAP:ABE-0006830,UniProtKB/Swiss-Prot:P76389,Genbank:NP_416567.4,EcoGene:EG14051,GeneID:946566;Name=NP_416567.4;Note=putative transport protein;gbkey=CDS;gene=yegH;product=inner membrane protein;protein_id=NP_416567.4;transl_table=11 NC_000913.3 RefSeq repeat_region 2139702 2139738 . + . ID=id251;Note=REP146 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2139759 2141612 . - . ID=gene2116;Dbxref=EcoGene:EG11361,GeneID:946582;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;gene_synonym=ECK2058,JW2049,yegA;locus_tag=b2064 NC_000913.3 RefSeq CDS 2139759 2141612 . - 0 ID=cds2048;Parent=gene2116;Dbxref=ASAP:ABE-0006833,UniProtKB/Swiss-Prot:P28249,Genbank:NP_416568.1,EcoGene:EG11361,GeneID:946582;Name=NP_416568.1;Note=suppressor of ompF assembly mutants;gbkey=CDS;gene=asmA;product=suppressor of OmpF assembly mutants%3B putative outer membrane protein assembly factor%3B inner membrane-anchored periplasmic protein;protein_id=NP_416568.1;transl_table=11 NC_000913.3 RefSeq gene 2141634 2142215 . - . ID=gene2117;Dbxref=EcoGene:EG11418,GeneID:946593;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;gene_synonym=dus,ECK2059,JW2050,paxA;locus_tag=b2065 NC_000913.3 RefSeq CDS 2141634 2142215 . - 0 ID=cds2049;Parent=gene2117;Dbxref=ASAP:ABE-0006835,UniProtKB/Swiss-Prot:P28248,Genbank:NP_416569.1,EcoGene:EG11418,GeneID:946593;Name=NP_416569.1;gbkey=CDS;gene=dcd;product=deoxycytidine triphosphate deaminase%3B dCTP deaminase;protein_id=NP_416569.1;transl_table=11 NC_000913.3 RefSeq gene 2142307 2142948 . - . ID=gene2118;Dbxref=EcoGene:EG11701,GeneID:946597;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;gene_synonym=ECK2060,JW2051;locus_tag=b2066 NC_000913.3 RefSeq CDS 2142307 2142948 . - 0 ID=cds2050;Parent=gene2118;Dbxref=ASAP:ABE-0006840,UniProtKB/Swiss-Prot:P0A8F4,Genbank:NP_416570.2,EcoGene:EG11701,GeneID:946597;Name=NP_416570.2;gbkey=CDS;gene=udk;product=uridine/cytidine kinase;protein_id=NP_416570.2;transl_table=11 NC_000913.3 RefSeq gene 2143266 2146583 . + . ID=gene2119;Dbxref=EcoGene:EG12396,GeneID:946600;Name=yegE;gbkey=Gene;gene=yegE;gene_biotype=protein_coding;gene_synonym=ECK2061,JW2052;locus_tag=b2067 NC_000913.3 RefSeq CDS 2143266 2146583 . + 0 ID=cds2051;Parent=gene2119;Dbxref=ASAP:ABE-0006845,UniProtKB/Swiss-Prot:P38097,Genbank:NP_416571.1,EcoGene:EG12396,GeneID:946600;Name=NP_416571.1;Note=putative sensor-type protein;gbkey=CDS;gene=yegE;product=putative diguanylate cyclase;protein_id=NP_416571.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2146600 2146683 . + . ID=id252;Note=REP147 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2146692 2147540 . - . ID=gene2120;Dbxref=EcoGene:EG11222,GeneID:947371;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;gene_synonym=aidA,ECK2062,JW2053;locus_tag=b2068 NC_000913.3 RefSeq CDS 2146692 2147540 . - 0 ID=cds2052;Parent=gene2120;Dbxref=ASAP:ABE-0006848,UniProtKB/Swiss-Prot:P04395,Genbank:NP_416572.1,EcoGene:EG11222,GeneID:947371;Name=NP_416572.1;Note=3-methyl-adenine DNA glycosylase II%2C inducible;gbkey=CDS;gene=alkA;product=3-methyl-adenine DNA glycosylase II;protein_id=NP_416572.1;transl_table=11 NC_000913.3 RefSeq gene 2147674 2149026 . + . ID=gene2121;Dbxref=EcoGene:EG12200,GeneID:947234;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;gene_synonym=ECK2063,JW2054;locus_tag=b2069 NC_000913.3 RefSeq CDS 2147674 2149026 . + 0 ID=cds2053;Parent=gene2121;Dbxref=ASAP:ABE-0006856,UniProtKB/Swiss-Prot:P36928,Genbank:NP_416573.4,EcoGene:EG12200,GeneID:947234;Name=NP_416573.4;Note=putative heat shock protein;gbkey=CDS;gene=yegD;product=Hsp70 chaperone family protein;protein_id=NP_416573.4;transl_table=11 NC_000913.3 RefSeq gene 2149039 2150985 . - . ID=gene2122;Dbxref=EcoGene:EG14052,GeneID:947159;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;gene_synonym=ECK2064,JW2055;locus_tag=b2070 NC_000913.3 RefSeq CDS 2149039 2150985 . - 0 ID=cds2054;Parent=gene2122;Dbxref=ASAP:ABE-0006858,UniProtKB/Swiss-Prot:P76393,Genbank:NP_416574.1,EcoGene:EG14052,GeneID:947159;Name=NP_416574.1;Note=putative chaperonin;gbkey=CDS;gene=yegI;product=protein kinase-related putative non-specific DNA-binding protein;protein_id=NP_416574.1;transl_table=11 NC_000913.3 RefSeq gene 2151185 2151646 . + . ID=gene2123;Dbxref=EcoGene:EG14053,GeneID:947201;Name=yegJ;gbkey=Gene;gene=yegJ;gene_biotype=protein_coding;gene_synonym=ECK2065,JW2056;locus_tag=b2071 NC_000913.3 RefSeq CDS 2151185 2151646 . + 0 ID=cds2055;Parent=gene2123;Dbxref=ASAP:ABE-0006863,UniProtKB/Swiss-Prot:P76394,Genbank:NP_416575.1,EcoGene:EG14053,GeneID:947201;Name=NP_416575.1;gbkey=CDS;gene=yegJ;product=uncharacterized protein;protein_id=NP_416575.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2151674 2151701 . + . ID=id253;Note=REP148 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2151711 2152472 . - . ID=gene2124;Dbxref=EcoGene:EG14054,GeneID:947269;Name=yegK;gbkey=Gene;gene=yegK;gene_biotype=protein_coding;gene_synonym=ECK2066,JW2057;locus_tag=b2072 NC_000913.3 RefSeq CDS 2151711 2152472 . - 0 ID=cds2056;Parent=gene2124;Dbxref=ASAP:ABE-0006865,UniProtKB/Swiss-Prot:P76395,Genbank:NP_416576.1,EcoGene:EG14054,GeneID:947269;Name=NP_416576.1;gbkey=CDS;gene=yegK;product=ser/thr phosphatase-related protein;protein_id=NP_416576.1;transl_table=11 NC_000913.3 RefSeq gene 2152469 2153128 . - . ID=gene2125;Dbxref=EcoGene:EG14055,GeneID:946602;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;gene_synonym=ECK2067,JW2058;locus_tag=b2073 NC_000913.3 RefSeq CDS 2152469 2153128 . - 0 ID=cds2057;Parent=gene2125;Dbxref=ASAP:ABE-0006867,UniProtKB/Swiss-Prot:P76396,Genbank:NP_416577.1,EcoGene:EG14055,GeneID:946602;Name=NP_416577.1;gbkey=CDS;gene=yegL;product=VMA domain protein;protein_id=NP_416577.1;transl_table=11 NC_000913.3 RefSeq gene 2153309 2153451 . + . ID=gene2126;Dbxref=EcoGene:EG31151,GeneID:2847673;Name=sibA;gbkey=Gene;gene=sibA;gene_biotype=antisense_RNA;gene_synonym=ECK2068,JWR0241,QUAD1a,ryeC,tp11;locus_tag=b4436 NC_000913.3 RefSeq ncRNA 2153309 2153451 . + . ID=rna67;Parent=gene2126;Dbxref=ASAP:ABE-0047256,EcoGene:EG31151,GeneID:2847673;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibA;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsA protein NC_000913.3 RefSeq exon 2153309 2153451 . + . ID=id254;Parent=rna67;Dbxref=ASAP:ABE-0047256,EcoGene:EG31151,GeneID:2847673;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibA;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsA protein NC_000913.3 RefSeq gene 2153349 2153408 . - . ID=gene2127;Dbxref=EcoGene:EG14472,GeneID:7751625;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;gene_synonym=ECK4482;locus_tag=b4667 NC_000913.3 RefSeq CDS 2153349 2153408 . - 0 ID=cds2058;Parent=gene2127;Dbxref=UniProtKB/Swiss-Prot:C1P607,Genbank:YP_002791247.1,EcoGene:EG14472,GeneID:7751625;Name=YP_002791247.1;gbkey=CDS;gene=ibsA;product=toxic membrane protein;protein_id=YP_002791247.1;transl_table=11 NC_000913.3 RefSeq gene 2153644 2153779 . + . ID=gene2128;Dbxref=EcoGene:EG31152,GeneID:2847674;Name=sibB;gbkey=Gene;gene=sibB;gene_biotype=antisense_RNA;gene_synonym=ECK2069,JWR0242,QUAD1b,ryeD,tpe60;locus_tag=b4437 NC_000913.3 RefSeq ncRNA 2153644 2153779 . + . ID=rna68;Parent=gene2128;Dbxref=ASAP:ABE-0047257,EcoGene:EG31152,GeneID:2847674;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibB;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsB protein NC_000913.3 RefSeq exon 2153644 2153779 . + . ID=id255;Parent=rna68;Dbxref=ASAP:ABE-0047257,EcoGene:EG31152,GeneID:2847674;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibB;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsB protein NC_000913.3 RefSeq gene 2153681 2153737 . - . ID=gene2129;Dbxref=EcoGene:EG14473,GeneID:7751626;Name=ibsB;gbkey=Gene;gene=ibsB;gene_biotype=protein_coding;gene_synonym=ECK4483;locus_tag=b4668 NC_000913.3 RefSeq CDS 2153681 2153737 . - 0 ID=cds2059;Parent=gene2129;Dbxref=UniProtKB/Swiss-Prot:C1P608,Genbank:YP_002791248.1,EcoGene:EG14473,GeneID:7751626;Name=YP_002791248.1;gbkey=CDS;gene=ibsB;product=toxic membrane protein;protein_id=YP_002791248.1;transl_table=11 NC_000913.3 RefSeq gene 2154016 2155263 . + . ID=gene2130;Dbxref=EcoGene:EG14056,GeneID:946604;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;gene_synonym=ECK2070,JW5338,yegM;locus_tag=b2074 NC_000913.3 RefSeq CDS 2154016 2155263 . + 0 ID=cds2060;Parent=gene2130;Dbxref=ASAP:ABE-0006872,UniProtKB/Swiss-Prot:P76397,Genbank:NP_416578.2,EcoGene:EG14056,GeneID:946604;Name=NP_416578.2;Note=putative membrane protein;gbkey=CDS;gene=mdtA;product=multidrug efflux system%2C subunit A;protein_id=NP_416578.2;transl_table=11 NC_000913.3 RefSeq gene 2155263 2158385 . + . ID=gene2131;Dbxref=EcoGene:EG14057,GeneID:946606;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;gene_synonym=ECK2071,JW2060,yegN;locus_tag=b2075 NC_000913.3 RefSeq CDS 2155263 2158385 . + 0 ID=cds2061;Parent=gene2131;Dbxref=ASAP:ABE-0006874,UniProtKB/Swiss-Prot:P76398,Genbank:NP_416579.1,EcoGene:EG14057,GeneID:946606;Name=NP_416579.1;gbkey=CDS;gene=mdtB;product=multidrug efflux system%2C subunit B;protein_id=NP_416579.1;transl_table=11 NC_000913.3 RefSeq gene 2158386 2161463 . + . ID=gene2132;Dbxref=EcoGene:EG14058,GeneID:946608;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;gene_synonym=ECK2072,JW2061,yegO;locus_tag=b2076 NC_000913.3 RefSeq CDS 2158386 2161463 . + 0 ID=cds2062;Parent=gene2132;Dbxref=ASAP:ABE-0006877,UniProtKB/Swiss-Prot:P76399,Genbank:NP_416580.1,EcoGene:EG14058,GeneID:946608;Name=NP_416580.1;gbkey=CDS;gene=mdtC;product=multidrug efflux system%2C subunit C;protein_id=NP_416580.1;transl_table=11 NC_000913.3 RefSeq gene 2161464 2162879 . + . ID=gene2133;Dbxref=EcoGene:EG12136,GeneID:946601;Name=iceT;gbkey=Gene;gene=iceT;gene_biotype=protein_coding;gene_synonym=ECK2073,JW2062,mdtD,yegB;locus_tag=b2077 NC_000913.3 RefSeq CDS 2161464 2162879 . + 0 ID=cds2063;Parent=gene2133;Dbxref=ASAP:ABE-0006879,UniProtKB/Swiss-Prot:P36554,Genbank:NP_416581.1,EcoGene:EG12136,GeneID:946601;Name=NP_416581.1;Note=putative transport protein;gbkey=CDS;gene=iceT;product=putative citrate/iron-citrate/zinc-citrate efflux transporter;protein_id=NP_416581.1;transl_table=11 NC_000913.3 RefSeq gene 2162876 2164279 . + . ID=gene2134;Dbxref=EcoGene:EG11617,GeneID:946611;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;gene_synonym=ECK2074,JW2063;locus_tag=b2078 NC_000913.3 RefSeq CDS 2162876 2164279 . + 0 ID=cds2064;Parent=gene2134;Dbxref=ASAP:ABE-0006882,UniProtKB/Swiss-Prot:P30847,Genbank:NP_416582.1,EcoGene:EG11617,GeneID:946611;Name=NP_416582.1;Note=sensor protein (for BaeR);gbkey=CDS;gene=baeS;product=sensory histidine kinase in two-component regulatory system with BaeR;protein_id=NP_416582.1;transl_table=11 NC_000913.3 RefSeq gene 2164276 2164998 . + . ID=gene2135;Dbxref=EcoGene:EG11618,GeneID:946605;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;gene_synonym=ECK2075,JW2064;locus_tag=b2079 NC_000913.3 RefSeq CDS 2164276 2164998 . + 0 ID=cds2065;Parent=gene2135;Dbxref=ASAP:ABE-0006884,UniProtKB/Swiss-Prot:P69228,Genbank:NP_416583.1,EcoGene:EG11618,GeneID:946605;Name=NP_416583.1;Note=transcriptional response regulatory protein (sensor BaeS);gbkey=CDS;gene=baeR;product=response regulator in two-component regulatory system with BaeS;protein_id=NP_416583.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2165017 2165096 . + . ID=id256;Note=REP149 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2165189 2165521 . + . ID=gene2136;Dbxref=EcoGene:EG14059,GeneID:947095;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;gene_synonym=ECK2076,JW5339;locus_tag=b2080 NC_000913.3 RefSeq CDS 2165189 2165521 . + 0 ID=cds2066;Parent=gene2136;Dbxref=ASAP:ABE-0006888,UniProtKB/Swiss-Prot:P76402,Genbank:NP_416584.4,EcoGene:EG14059,GeneID:947095;Name=NP_416584.4;gbkey=CDS;gene=yegP;product=UPF0339 family protein;protein_id=NP_416584.4;transl_table=11 NC_000913.3 RefSeq gene 2165668 2167029 . + . ID=gene2137;Dbxref=EcoGene:EG14060,GeneID:946609;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;gene_synonym=ECK2077,JW2066;locus_tag=b2081 NC_000913.3 RefSeq CDS 2165668 2167029 . + 0 ID=cds2067;Parent=gene2137;Dbxref=ASAP:ABE-0006891,UniProtKB/Swiss-Prot:P76403,Genbank:NP_416585.1,EcoGene:EG14060,GeneID:946609;Name=NP_416585.1;gbkey=CDS;gene=yegQ;product=putative peptidase;protein_id=NP_416585.1;transl_table=11 NC_000913.3 RefSeq gene 2167114 2167200 . + . ID=gene2138;Dbxref=EcoGene:EG31153,GeneID:2847769;Name=cyaR;gbkey=Gene;gene=cyaR;gene_biotype=antisense_RNA;gene_synonym=ECK2078,JWR0243,ryeE;locus_tag=b4438 NC_000913.3 RefSeq ncRNA 2167114 2167200 . + . ID=rna69;Parent=gene2138;Dbxref=ASAP:ABE-0047258,EcoGene:EG31153,GeneID:2847769;Note=identified in a large scale screen;gbkey=ncRNA;gene=cyaR;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompX mRNA instability%2C Hfq-dependent%2C cAMP-induced NC_000913.3 RefSeq exon 2167114 2167200 . + . ID=id257;Parent=rna69;Dbxref=ASAP:ABE-0047258,EcoGene:EG31153,GeneID:2847769;Note=identified in a large scale screen;gbkey=ncRNA;gene=cyaR;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompX mRNA instability%2C Hfq-dependent%2C cAMP-induced NC_000913.3 RefSeq region 2167198 2167826 . - . ID=id258;Note=cryptic prophage PR-X;gbkey=misc_feature;gene=cyaR NC_000913.3 RefSeq gene 2167302 2167520 . - . ID=gene2139;Dbxref=EcoGene:EG12425,GeneID:945404;Name=ogrK;gbkey=Gene;gene=ogrK;gene_biotype=protein_coding;gene_synonym=ECK2079,JW2067;locus_tag=b2082 NC_000913.3 RefSeq CDS 2167302 2167520 . - 0 ID=cds2068;Parent=gene2139;Dbxref=ASAP:ABE-0006893,UniProtKB/Swiss-Prot:P37057,Genbank:NP_416586.1,EcoGene:EG12425,GeneID:945404;Name=NP_416586.1;Note=prophage P2 ogr protein;gbkey=CDS;gene=ogrK;product=orphan Ogr protein%2C positive regulator of P2 growth;protein_id=NP_416586.1;transl_table=11 NC_000913.3 RefSeq gene 2167602 2167814 . - . ID=gene2140;Dbxref=EcoGene:EG14309,GeneID:949050;Name=yegZ;gbkey=Gene;gene=yegZ;gene_biotype=pseudogene;gene_synonym=ECK2080,JW5886;locus_tag=b2083;pseudo=true NC_000913.3 RefSeq CDS 2167602 2167814 . - 0 ID=cds2069;Parent=gene2140;Dbxref=ASAP:ABE-0006896,EcoGene:EG14309,GeneID:949050;Note=pseudogene%2C gpD phage P2-like protein D;gbkey=CDS;gene=yegZ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2167989 2168306 . - . ID=gene2141;Dbxref=EcoGene:EG14061,GeneID:946613;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;gene_synonym=ECK2081,JW5837;locus_tag=b2085 NC_000913.3 RefSeq CDS 2167989 2168306 . - 0 ID=cds2070;Parent=gene2141;Dbxref=ASAP:ABE-0006907,UniProtKB/Swiss-Prot:P76406,Genbank:NP_416589.2,EcoGene:EG14061,GeneID:946613;Name=NP_416589.2;gbkey=CDS;gene=yegR;product=uncharacterized protein;protein_id=NP_416589.2;transl_table=11 NC_000913.3 RefSeq gene 2168712 2169611 . + . ID=gene2142;Dbxref=EcoGene:EG14367,GeneID:946626;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;gene_synonym=ECK2082,JW2070;locus_tag=b2086 NC_000913.3 RefSeq CDS 2168712 2169611 . + 0 ID=cds2071;Parent=gene2142;Dbxref=ASAP:ABE-0006911,UniProtKB/Swiss-Prot:P76407,Genbank:NP_416590.1,EcoGene:EG14367,GeneID:946626;Name=NP_416590.1;gbkey=CDS;gene=yegS;product=phosphatidylglycerol kinase%2C metal-dependent;protein_id=NP_416590.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2169650 2169683 . + . ID=id259;Note=REP150 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2171429 2171727 . - . ID=gene2143;Dbxref=EcoGene:EG12162,GeneID:2847672;Name=gatR;gbkey=Gene;gene=gatR;gene_biotype=pseudogene;gene_synonym=ECK2083,JW2074,JW5340;locus_tag=b4498;part=1/2;pseudo=true NC_000913.3 RefSeq gene 2169693 2170167 . - . ID=gene2143;Dbxref=EcoGene:EG12162,GeneID:2847672;Name=gatR;gbkey=Gene;gene=gatR;gene_biotype=pseudogene;gene_synonym=ECK2083,JW2074,JW5340;locus_tag=b4498;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 2171429 2171727 . - 0 ID=cds2072;Parent=gene2143;Dbxref=ASAP:ABE-0006914,ASAP:ABE-0006921,ASAP:ABE-0285099,UniProtKB/Swiss-Prot:P36930,EcoGene:EG12162,GeneID:2847672;Note=pseudogene%2C repressor for gat operon~interrupted by IS3~split galactitol utilization operon repressor%2C fragment 2~split galactitol utilization operon repressor%2C interrupted;gbkey=CDS;gene=gatR;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2169693 2170167 . - 1 ID=cds2072;Parent=gene2143;Dbxref=ASAP:ABE-0006914,ASAP:ABE-0006921,ASAP:ABE-0285099,UniProtKB/Swiss-Prot:P36930,EcoGene:EG12162,GeneID:2847672;Note=pseudogene%2C repressor for gat operon~interrupted by IS3~split galactitol utilization operon repressor%2C fragment 2~split galactitol utilization operon repressor%2C interrupted;gbkey=CDS;gene=gatR;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 2170171 2171428 . + . ID=id260;gbkey=mobile_element NC_000913.3 RefSeq gene 2170236 2170535 . + . ID=gene2144;Dbxref=EcoGene:EG40005,GeneID:946616;Name=insE1;gbkey=Gene;gene=insE1;gene_biotype=protein_coding;gene_synonym=ECK0298;locus_tag=b2088 NC_000913.3 RefSeq CDS 2170236 2170535 . + 0 ID=cds2073;Parent=gene2144;Dbxref=ASAP:ABE-0006917,UniProtKB/Swiss-Prot:P0CF70,Genbank:NP_416592.2,EcoGene:EG40005,GeneID:946616;Name=NP_416592.2;gbkey=CDS;gene=insE1;product=IS3 transposase A;protein_id=NP_416592.2;transl_table=11 NC_000913.3 RefSeq gene 2170532 2171398 . + . ID=gene2145;Dbxref=EcoGene:EG40006,GeneID:946629;Name=insF1;gbkey=Gene;gene=insF1;gene_biotype=protein_coding;gene_synonym=ECK0299;locus_tag=b2089 NC_000913.3 RefSeq CDS 2170532 2171398 . + 0 ID=cds2074;Parent=gene2145;Dbxref=ASAP:ABE-0006919,UniProtKB/Swiss-Prot:P0CF83,Genbank:NP_416593.1,EcoGene:EG40006,GeneID:946629;Name=NP_416593.1;gbkey=CDS;gene=insF1;product=IS3 transposase B;protein_id=NP_416593.1;transl_table=11 NC_000913.3 RefSeq gene 2171833 2172873 . - . ID=gene2146;Dbxref=EcoGene:EG12417,GeneID:946598;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;gene_synonym=ECK2084,JW2075;locus_tag=b2091 NC_000913.3 RefSeq CDS 2171833 2172873 . - 0 ID=cds2075;Parent=gene2146;Dbxref=ASAP:ABE-0006924,UniProtKB/Swiss-Prot:P0A9S3,Genbank:NP_416594.1,EcoGene:EG12417,GeneID:946598;Name=NP_416594.1;Note=galactitol-1-phosphate dehydrogenase;gbkey=CDS;gene=gatD;product=galactitol-1-phosphate dehydrogenase%2C Zn-dependent and NAD(P)-binding;protein_id=NP_416594.1;transl_table=11 NC_000913.3 RefSeq gene 2172921 2174278 . - . ID=gene2147;Dbxref=EcoGene:EG12416,GeneID:946603;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=pseudogene;gene_synonym=ECK2085,JW2076;locus_tag=b2092;pseudo=true NC_000913.3 RefSeq CDS 2173365 2174278 . - 0 ID=cds2076;Parent=gene2147;Dbxref=ASAP:ABE-0006928,UniProtKB/Swiss-Prot:P69831,EcoGene:EG12416,GeneID:946603;Note=pseudogene%2C galactitol-specific enzyme IIC component of PTS%3Btransport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols~PTS system galactitol-specific enzyme IIC;gbkey=CDS;gene=gatC;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2172921 2173362 . - 1 ID=cds2076;Parent=gene2147;Dbxref=ASAP:ABE-0006928,UniProtKB/Swiss-Prot:P69831,EcoGene:EG12416,GeneID:946603;Note=pseudogene%2C galactitol-specific enzyme IIC component of PTS%3Btransport%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols~PTS system galactitol-specific enzyme IIC;gbkey=CDS;gene=gatC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2174282 2174566 . - . ID=gene2148;Dbxref=EcoGene:EG12415,GeneID:946610;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;gene_synonym=ECK2086,JW2077;locus_tag=b2093 NC_000913.3 RefSeq CDS 2174282 2174566 . - 0 ID=cds2077;Parent=gene2148;Dbxref=ASAP:ABE-0006930,UniProtKB/Swiss-Prot:P37188,Genbank:NP_416596.1,EcoGene:EG12415,GeneID:946610;Name=NP_416596.1;Note=galactitol-specific enzyme IIB of phosphotransferase system;gbkey=CDS;gene=gatB;product=galactitol-specific enzyme IIB component of PTS;protein_id=NP_416596.1;transl_table=11 NC_000913.3 RefSeq gene 2174597 2175049 . - . ID=gene2149;Dbxref=EcoGene:EG12414,GeneID:946633;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;gene_synonym=ECK2087,JW2078,JW2081;locus_tag=b2094 NC_000913.3 RefSeq CDS 2174597 2175049 . - 0 ID=cds2078;Parent=gene2149;Dbxref=ASAP:ABE-0006932,UniProtKB/Swiss-Prot:P69828,Genbank:NP_416597.1,EcoGene:EG12414,GeneID:946633;Name=NP_416597.1;Note=galactitol-specific enzyme IIA of phosphotransferase system;gbkey=CDS;gene=gatA;product=galactitol-specific enzyme IIA component of PTS;protein_id=NP_416597.1;transl_table=11 NC_000913.3 RefSeq gene 2175059 2176321 . - . ID=gene2150;Dbxref=EcoGene:EG12418,GeneID:946641;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;gene_synonym=ECK2088,JW2082;locus_tag=b2095 NC_000913.3 RefSeq CDS 2175059 2176321 . - 0 ID=cds2079;Parent=gene2150;Dbxref=ASAP:ABE-0006934,UniProtKB/Swiss-Prot:P0C8J8,Genbank:NP_416598.1,EcoGene:EG12418,GeneID:946641;Name=NP_416598.1;Note=putative tagatose 6-phosphate kinase 1;gbkey=CDS;gene=gatZ;product=D-tagatose 1%2C6-bisphosphate aldolase 2%2C subunit;protein_id=NP_416598.1;transl_table=11 NC_000913.3 RefSeq gene 2176350 2177204 . - . ID=gene2151;Dbxref=EcoGene:EG12419,GeneID:946636;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;gene_synonym=ECK2089,JW5343,yegF;locus_tag=b2096 NC_000913.3 RefSeq CDS 2176350 2177204 . - 0 ID=cds2080;Parent=gene2151;Dbxref=ASAP:ABE-0006938,UniProtKB/Swiss-Prot:P0C8J6,Genbank:NP_416599.2,EcoGene:EG12419,GeneID:946636;Name=NP_416599.2;Note=tagatose-bisphosphate aldolase 1;gbkey=CDS;gene=gatY;product=D-tagatose 1%2C6-bisphosphate aldolase 2%2C catalytic subunit;protein_id=NP_416599.2;transl_table=11 NC_000913.3 RefSeq repeat_region 2177408 2177484 . + . ID=id261;Note=REP151 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2177512 2178564 . - . ID=gene2152;Dbxref=EcoGene:EG14062,GeneID:946632;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;gene_synonym=dhnA,ECK2090,JW5344;locus_tag=b2097 NC_000913.3 RefSeq CDS 2177512 2178564 . - 0 ID=cds2081;Parent=gene2152;Dbxref=ASAP:ABE-0006941,UniProtKB/Swiss-Prot:P0A991,Genbank:NP_416600.4,EcoGene:EG14062,GeneID:946632;Name=NP_416600.4;gbkey=CDS;gene=fbaB;product=fructose-bisphosphate aldolase class I;protein_id=NP_416600.4;transl_table=11 NC_000913.3 RefSeq gene 2178821 2180098 . + . ID=gene2153;Dbxref=EcoGene:EG14063,GeneID:946638;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;gene_synonym=ECK2091,JW2085;locus_tag=b2098 NC_000913.3 RefSeq CDS 2178821 2180098 . + 0 ID=cds2082;Parent=gene2153;Dbxref=ASAP:ABE-0006946,UniProtKB/Swiss-Prot:P76417,Genbank:NP_416601.1,EcoGene:EG14063,GeneID:946638;Name=NP_416601.1;Note=putative nucleoside permease protein;gbkey=CDS;gene=yegT;product=nucleoside transporter%2C low affinity;protein_id=NP_416601.1;transl_table=11 NC_000913.3 RefSeq gene 2180095 2181099 . + . ID=gene2154;Dbxref=EcoGene:EG14064,GeneID:946630;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;gene_synonym=ECK2092,JW2086;locus_tag=b2099 NC_000913.3 RefSeq CDS 2180095 2181099 . + 0 ID=cds2083;Parent=gene2154;Dbxref=ASAP:ABE-0006948,UniProtKB/Swiss-Prot:P76418,Genbank:NP_416602.1,EcoGene:EG14064,GeneID:946630;Name=NP_416602.1;gbkey=CDS;gene=yegU;product=ADP-ribosylglycohydrolase family protein;protein_id=NP_416602.1;transl_table=11 NC_000913.3 RefSeq gene 2181096 2182061 . + . ID=gene2155;Dbxref=EcoGene:EG14065,GeneID:946637;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;gene_synonym=ECK2093,JW2087;locus_tag=b2100 NC_000913.3 RefSeq CDS 2181096 2182061 . + 0 ID=cds2084;Parent=gene2155;Dbxref=ASAP:ABE-0006950,UniProtKB/Swiss-Prot:P76419,Genbank:NP_416603.1,EcoGene:EG14065,GeneID:946637;Name=NP_416603.1;Note=putative kinase;gbkey=CDS;gene=yegV;product=putative kinase;protein_id=NP_416603.1;transl_table=11 NC_000913.3 RefSeq gene 2182035 2182781 . - . ID=gene2156;Dbxref=EcoGene:EG14066,GeneID:946639;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;gene_synonym=ECK2094,JW2088;locus_tag=b2101 NC_000913.3 RefSeq CDS 2182035 2182781 . - 0 ID=cds2085;Parent=gene2156;Dbxref=ASAP:ABE-0006952,UniProtKB/Swiss-Prot:P0ACM5,Genbank:NP_416604.1,EcoGene:EG14066,GeneID:946639;Name=NP_416604.1;Note=putative transcriptional regulator;gbkey=CDS;gene=yegW;product=putative DNA-binding transcriptional regulator;protein_id=NP_416604.1;transl_table=11 NC_000913.3 RefSeq gene 2182833 2183651 . - . ID=gene2157;Dbxref=EcoGene:EG14067,GeneID:945543;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=protein_coding;gene_synonym=ECK2095,JW5345;locus_tag=b2102 NC_000913.3 RefSeq CDS 2182833 2183651 . - 0 ID=cds2086;Parent=gene2157;Dbxref=ASAP:ABE-0006955,UniProtKB/Swiss-Prot:P76421,Genbank:NP_416605.2,EcoGene:EG14067,GeneID:945543;Name=NP_416605.2;gbkey=CDS;gene=yegX;product=putative family 25 glycosyl hydrolase;protein_id=NP_416605.2;transl_table=11 NC_000913.3 RefSeq gene 2183716 2184516 . - . ID=gene2158;Dbxref=EcoGene:EG14068,GeneID:946459;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;gene_synonym=ECK2096,JW2090,thiA,thiJ,thiN;locus_tag=b2103 NC_000913.3 RefSeq CDS 2183716 2184516 . - 0 ID=cds2087;Parent=gene2158;Dbxref=ASAP:ABE-0006958,UniProtKB/Swiss-Prot:P76422,Genbank:NP_416606.1,EcoGene:EG14068,GeneID:946459;Name=NP_416606.1;Note=phosphomethylpyrimidine kinase;gbkey=CDS;gene=thiD;product=hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase;protein_id=NP_416606.1;transl_table=11 NC_000913.3 RefSeq gene 2184513 2185301 . - . ID=gene2159;Dbxref=EcoGene:EG14069,GeneID:945142;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;gene_synonym=ECK2097,JW2091;locus_tag=b2104 NC_000913.3 RefSeq CDS 2184513 2185301 . - 0 ID=cds2088;Parent=gene2159;Dbxref=ASAP:ABE-0006960,UniProtKB/Swiss-Prot:P76423,Genbank:NP_416607.1,EcoGene:EG14069,GeneID:945142;Name=NP_416607.1;gbkey=CDS;gene=thiM;product=hydoxyethylthiazole kinase;protein_id=NP_416607.1;transl_table=11 NC_000913.3 RefSeq gene 2185524 2185796 . - . ID=gene2160;Dbxref=EcoGene:EG14070,GeneID:947114;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;gene_synonym=ECK2098,JW2092,yohL;locus_tag=b2105 NC_000913.3 RefSeq CDS 2185524 2185796 . - 0 ID=cds2089;Parent=gene2160;Dbxref=ASAP:ABE-0006964,UniProtKB/Swiss-Prot:P64530,Genbank:NP_416608.1,EcoGene:EG14070,GeneID:947114;Name=NP_416608.1;gbkey=CDS;gene=rcnR;product=transcriptional repressor of rcnA;protein_id=NP_416608.1;transl_table=11 NC_000913.3 RefSeq gene 2185917 2186741 . + . ID=gene2161;Dbxref=EcoGene:EG14071,GeneID:949078;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;gene_synonym=ECK2099,JW2093,yohM;locus_tag=b2106 NC_000913.3 RefSeq CDS 2185917 2186741 . + 0 ID=cds2090;Parent=gene2161;Dbxref=ASAP:ABE-0006968,UniProtKB/Swiss-Prot:P76425,Genbank:NP_416609.1,EcoGene:EG14071,GeneID:949078;Name=NP_416609.1;gbkey=CDS;gene=rcnA;product=membrane protein conferring nickel and cobalt resistance;protein_id=NP_416609.1;transl_table=11 NC_000913.3 RefSeq gene 2186960 2187298 . + . ID=gene2162;Dbxref=EcoGene:EG14072,GeneID:949080;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;gene_synonym=ECK2100,JW5346,yohN;locus_tag=b2107 NC_000913.3 RefSeq CDS 2186960 2187298 . + 0 ID=cds2091;Parent=gene2162;Dbxref=ASAP:ABE-0006970,UniProtKB/Swiss-Prot:P64534,Genbank:NP_416610.4,EcoGene:EG14072,GeneID:949080;Name=NP_416610.4;gbkey=CDS;gene=rcnB;product=periplasmic modulator of Ni and Co efflux;protein_id=NP_416610.4;transl_table=11 NC_000913.3 RefSeq gene 2187380 2188414 . - . ID=gene2163;Dbxref=EcoGene:EG11987,GeneID:946642;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;gene_synonym=ECK2101,JW2095;locus_tag=b2108 NC_000913.3 RefSeq CDS 2187380 2188414 . - 0 ID=cds2092;Parent=gene2163;Dbxref=ASAP:ABE-0006972,UniProtKB/Swiss-Prot:P33340,Genbank:NP_416611.1,EcoGene:EG11987,GeneID:946642;Name=NP_416611.1;Note=putative type-1 fimbrial protein;gbkey=CDS;gene=yehA;product=putative fimbrial-like adhesin protein;protein_id=NP_416611.1;transl_table=11 NC_000913.3 RefSeq gene 2188430 2190910 . - . ID=gene2164;Dbxref=EcoGene:EG11988,GeneID:946617;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;gene_synonym=ECK2102,JW2096;locus_tag=b2109 NC_000913.3 RefSeq CDS 2188430 2190910 . - 0 ID=cds2093;Parent=gene2164;Dbxref=ASAP:ABE-0006974,UniProtKB/Swiss-Prot:P33341,Genbank:NP_416612.1,EcoGene:EG11988,GeneID:946617;Name=NP_416612.1;Note=putative outer membrane protein;gbkey=CDS;gene=yehB;product=putative outer membrane protein;protein_id=NP_416612.1;transl_table=11 NC_000913.3 RefSeq gene 2190926 2191645 . - . ID=gene2165;Dbxref=EcoGene:EG11989,GeneID:946621;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;gene_synonym=ECK2103,JW2097;locus_tag=b2110 NC_000913.3 RefSeq CDS 2190926 2191645 . - 0 ID=cds2094;Parent=gene2165;Dbxref=ASAP:ABE-0006978,UniProtKB/Swiss-Prot:P33342,Genbank:NP_416613.1,EcoGene:EG11989,GeneID:946621;Name=NP_416613.1;Note=putative chaperone;gbkey=CDS;gene=yehC;product=putative periplasmic pilin chaperone;protein_id=NP_416613.1;transl_table=11 NC_000913.3 RefSeq gene 2191680 2192222 . - . ID=gene2166;Dbxref=EcoGene:EG11990,GeneID:946619;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;gene_synonym=ECK2104,JW2098;locus_tag=b2111 NC_000913.3 RefSeq CDS 2191680 2192222 . - 0 ID=cds2095;Parent=gene2166;Dbxref=ASAP:ABE-0006980,UniProtKB/Swiss-Prot:P33343,Genbank:NP_416614.1,EcoGene:EG11990,GeneID:946619;Name=NP_416614.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=yehD;product=putative fimbrial-like adhesin protein;protein_id=NP_416614.1;transl_table=11 NC_000913.3 RefSeq gene 2192515 2192796 . - . ID=gene2167;Dbxref=EcoGene:EG11991,GeneID:946615;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;gene_synonym=ECK2105,JW2099;locus_tag=b2112 NC_000913.3 RefSeq CDS 2192515 2192796 . - 0 ID=cds2096;Parent=gene2167;Dbxref=ASAP:ABE-0006984,UniProtKB/Swiss-Prot:P33344,Genbank:NP_416615.1,EcoGene:EG11991,GeneID:946615;Name=NP_416615.1;gbkey=CDS;gene=yehE;product=DUF2574 family protein;protein_id=NP_416615.1;transl_table=11 NC_000913.3 RefSeq gene 2193059 2194168 . - . ID=gene2168;Dbxref=EcoGene:EG10611,GeneID:946627;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;gene_synonym=apbC,ECK2106,JW2100;locus_tag=b2113 NC_000913.3 RefSeq CDS 2193059 2194168 . - 0 ID=cds2097;Parent=gene2168;Dbxref=ASAP:ABE-0006987,UniProtKB/Swiss-Prot:P0AF08,Genbank:NP_416616.4,EcoGene:EG10611,GeneID:946627;Name=NP_416616.4;Note=putative ATPase;gbkey=CDS;gene=mrp;product=antiporter inner membrane protein;protein_id=NP_416616.4;transl_table=11 NC_000913.3 RefSeq gene 2194300 2196333 . + . ID=gene2169;Dbxref=EcoGene:EG10586,GeneID:946643;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;gene_synonym=ECK2107,JW2101;locus_tag=b2114 NC_000913.3 RefSeq CDS 2194300 2196333 . + 0 ID=cds2098;Parent=gene2169;Dbxref=ASAP:ABE-0006991,UniProtKB/Swiss-Prot:P00959,Genbank:NP_416617.1,EcoGene:EG10586,GeneID:946643;Name=NP_416617.1;Note=methionine tRNA synthetase;gbkey=CDS;gene=metG;product=methionyl-tRNA synthetase;protein_id=NP_416617.1;transl_table=11 NC_000913.3 RefSeq gene 2196474 2200269 . + . ID=gene2170;Dbxref=EcoGene:EG11992,GeneID:2847726;Name=yehH;gbkey=Gene;gene=yehH;gene_biotype=pseudogene;gene_synonym=dinO,ECK2108,JW2102,JW5915,JW5916,molR,sosF,yehF,yehG;locus_tag=b4499;pseudo=true NC_000913.3 RefSeq CDS 2196474 2199320 . + 0 ID=cds2099;Parent=gene2170;Dbxref=ASAP:ABE-0006997,ASAP:ABE-0006999,ASAP:ABE-0007001,ASAP:ABE-0285100,UniProtKB/Swiss-Prot:P33345,EcoGene:EG11992,GeneID:2847726;Note=DUF4132 family pseudogene%3B defective yehI paralog~molybdate metabolism regulator%2C first fragment~molybdate metabolism regulator%2C second fragment 2~yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function;gbkey=CDS;gene=yehH;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2199322 2200269 . + 0 ID=cds2099;Parent=gene2170;Dbxref=ASAP:ABE-0006997,ASAP:ABE-0006999,ASAP:ABE-0007001,ASAP:ABE-0285100,UniProtKB/Swiss-Prot:P33345,EcoGene:EG11992,GeneID:2847726;Note=DUF4132 family pseudogene%3B defective yehI paralog~molybdate metabolism regulator%2C first fragment~molybdate metabolism regulator%2C second fragment 2~yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function;gbkey=CDS;gene=yehH;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2200279 2203911 . + . ID=gene2171;Dbxref=EcoGene:EG11995,GeneID:946649;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=protein_coding;gene_synonym=ECK2109,JW2105;locus_tag=b2118 NC_000913.3 RefSeq CDS 2200279 2203911 . + 0 ID=cds2100;Parent=gene2171;Dbxref=ASAP:ABE-0007003,UniProtKB/Swiss-Prot:P33346,Genbank:NP_416621.1,EcoGene:EG11995,GeneID:946649;Name=NP_416621.1;Note=putative regulator;gbkey=CDS;gene=yehI;product=DUF4132 domain-containing protein;protein_id=NP_416621.1;transl_table=11 NC_000913.3 RefSeq gene 2203972 2204289 . + . ID=gene2172;Dbxref=EcoGene:EG11997,GeneID:4056035;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;gene_synonym=ECK2110,JW2106;locus_tag=b4541 NC_000913.3 RefSeq CDS 2203972 2204289 . + 0 ID=cds2101;Parent=gene2172;Dbxref=ASAP:ABE-0285062,UniProtKB/Swiss-Prot:P33347,Genbank:YP_588459.1,EcoGene:EG11997,GeneID:4056035;Name=YP_588459.1;gbkey=CDS;gene=yehK;product=uncharacterized protein;protein_id=YP_588459.1;transl_table=11 NC_000913.3 RefSeq gene 2204596 2205684 . + . ID=gene2173;Dbxref=EcoGene:EG11998,GeneID:946656;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;gene_synonym=ECK2111,JW5349;locus_tag=b2119 NC_000913.3 RefSeq CDS 2204596 2205684 . + 0 ID=cds2102;Parent=gene2173;Dbxref=ASAP:ABE-0007006,UniProtKB/Swiss-Prot:P33348,Genbank:NP_416623.2,EcoGene:EG11998,GeneID:946656;Name=NP_416623.2;gbkey=CDS;gene=yehL;product=putative hexameric AAA+ MoxR family ATPase;protein_id=NP_416623.2;transl_table=11 NC_000913.3 RefSeq gene 2205695 2207974 . + . ID=gene2174;Dbxref=EcoGene:EG11999,GeneID:946651;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;gene_synonym=ECK2112,JW2108,yehN,yehO;locus_tag=b2120 NC_000913.3 RefSeq CDS 2205695 2207974 . + 0 ID=cds2103;Parent=gene2174;Dbxref=ASAP:ABE-0007008,UniProtKB/Swiss-Prot:P33349,Genbank:NP_416624.1,EcoGene:EG11999,GeneID:946651;Name=NP_416624.1;gbkey=CDS;gene=yehM;product=uncharacterized protein;protein_id=NP_416624.1;transl_table=11 NC_000913.3 RefSeq gene 2207967 2209103 . + . ID=gene2175;Dbxref=EcoGene:EG12002,GeneID:946652;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;gene_synonym=ECK2113,JW5350;locus_tag=b2121 NC_000913.3 RefSeq CDS 2207967 2209103 . + 0 ID=cds2104;Parent=gene2175;Dbxref=ASAP:ABE-0007013,UniProtKB/Swiss-Prot:P33352,Genbank:NP_416625.1,EcoGene:EG12002,GeneID:946652;Name=NP_416625.1;gbkey=CDS;gene=yehP;product=VMA domain putative YehL ATPase stimulator;protein_id=NP_416625.1;transl_table=11 NC_000913.3 RefSeq gene 2209100 2211100 . + . ID=gene2176;Dbxref=EcoGene:EG12003,GeneID:946654;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=pseudogene;gene_synonym=ECK2114,JW2110;locus_tag=b2122;pseudo=true NC_000913.3 RefSeq CDS 2209100 2211100 . + 0 ID=cds2105;Parent=gene2176;Dbxref=ASAP:ABE-0007015,UniProtKB/Swiss-Prot:P33353,EcoGene:EG12003,GeneID:946654;Note=pseudogene;gbkey=CDS;gene=yehQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2211225 2211686 . + . ID=gene2177;Dbxref=EcoGene:EG12004,GeneID:949023;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;gene_synonym=ECK2115,JW5351;locus_tag=b2123 NC_000913.3 RefSeq CDS 2211225 2211686 . + 0 ID=cds2106;Parent=gene2177;Dbxref=ASAP:ABE-0007018,UniProtKB/Swiss-Prot:P33354,Genbank:NP_416627.2,EcoGene:EG12004,GeneID:949023;Name=NP_416627.2;gbkey=CDS;gene=yehR;product=lipoprotein%2C DUF1307 family;protein_id=NP_416627.2;transl_table=11 NC_000913.3 RefSeq gene 2211726 2212196 . - . ID=gene2178;Dbxref=EcoGene:EG12005,GeneID:949026;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;gene_synonym=ECK2116,JW2112;locus_tag=b2124 NC_000913.3 RefSeq CDS 2211726 2212196 . - 0 ID=cds2107;Parent=gene2178;Dbxref=ASAP:ABE-0007021,UniProtKB/Swiss-Prot:P33355,Genbank:NP_416628.1,EcoGene:EG12005,GeneID:949026;Name=NP_416628.1;gbkey=CDS;gene=yehS;product=DUF1456 family protein;protein_id=NP_416628.1;transl_table=11 NC_000913.3 RefSeq gene 2212243 2212962 . - . ID=gene2179;Dbxref=EcoGene:EG12006,GeneID:949024;Name=yehT;gbkey=Gene;gene=yehT;gene_biotype=protein_coding;gene_synonym=ECK2117,JW5352;locus_tag=b2125 NC_000913.3 RefSeq CDS 2212243 2212962 . - 0 ID=cds2108;Parent=gene2179;Dbxref=ASAP:ABE-0007023,UniProtKB/Swiss-Prot:P0AFT5,Genbank:NP_416629.4,EcoGene:EG12006,GeneID:949024;Name=NP_416629.4;gbkey=CDS;gene=yehT;product=putative response regulator in two-component system withYehU;protein_id=NP_416629.4;transl_table=11 NC_000913.3 RefSeq gene 2212959 2214644 . - . ID=gene2180;Dbxref=EcoGene:EG12007,GeneID:949027;Name=yehU;gbkey=Gene;gene=yehU;gene_biotype=protein_coding;gene_synonym=ECK2118,JW5353;locus_tag=b2126 NC_000913.3 RefSeq CDS 2212959 2214644 . - 0 ID=cds2109;Parent=gene2180;Dbxref=ASAP:ABE-0007027,UniProtKB/Swiss-Prot:P0AD14,Genbank:NP_416630.1,EcoGene:EG12007,GeneID:949027;Name=NP_416630.1;Note=putative 2-component sensor protein;gbkey=CDS;gene=yehU;product=inner membrane putative sensory kinase in two-component system with YehT;protein_id=NP_416630.1;transl_table=11 NC_000913.3 RefSeq gene 2214866 2215597 . + . ID=gene2181;Dbxref=EcoGene:EG12008,GeneID:949029;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;gene_synonym=ECK2119,JW2115,yehV;locus_tag=b2127 NC_000913.3 RefSeq CDS 2214866 2215597 . + 0 ID=cds2110;Parent=gene2181;Dbxref=ASAP:ABE-0007030,UniProtKB/Swiss-Prot:P33358,Genbank:NP_416631.1,EcoGene:EG12008,GeneID:949029;Name=NP_416631.1;Note=putative transcriptional regulator;gbkey=CDS;gene=mlrA;product=transcriptional activator of csgD and csgBA;protein_id=NP_416631.1;transl_table=11 NC_000913.3 RefSeq gene 2215657 2215764 . + . ID=gene2182;Dbxref=EcoGene:EG14426,GeneID:1450279;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;gene_synonym=ECK2120,JW5354;locus_tag=b4542 NC_000913.3 RefSeq CDS 2215657 2215764 . + 0 ID=cds2111;Parent=gene2182;Dbxref=ASAP:ABE-0285063,UniProtKB/Swiss-Prot:Q2EES6,Genbank:YP_588460.1,EcoGene:EG14426,GeneID:1450279;Name=YP_588460.1;gbkey=CDS;gene=yohO;product=putative membrane protein;protein_id=YP_588460.1;transl_table=11 NC_000913.3 RefSeq gene 2215745 2216476 . - . ID=gene2183;Dbxref=EcoGene:EG12009,GeneID:949028;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;gene_synonym=ECK2121,JW2116;locus_tag=b2128 NC_000913.3 RefSeq CDS 2215745 2216476 . - 0 ID=cds2112;Parent=gene2183;Dbxref=ASAP:ABE-0007032,UniProtKB/Swiss-Prot:P33359,Genbank:NP_416632.1,EcoGene:EG12009,GeneID:949028;Name=NP_416632.1;Note=putative transport system permease protein;gbkey=CDS;gene=yehW;product=putative ABC transporter permease;protein_id=NP_416632.1;transl_table=11 NC_000913.3 RefSeq gene 2216481 2217407 . - . ID=gene2184;Dbxref=EcoGene:EG12010,GeneID:946659;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;gene_synonym=ECK2122,JW2117;locus_tag=b2129 NC_000913.3 RefSeq CDS 2216481 2217407 . - 0 ID=cds2113;Parent=gene2184;Dbxref=ASAP:ABE-0007034,UniProtKB/Swiss-Prot:P33360,Genbank:NP_416633.1,EcoGene:EG12010,GeneID:946659;Name=NP_416633.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yehX;product=putative ABC transporter ATPase;protein_id=NP_416633.1;transl_table=11 NC_000913.3 RefSeq gene 2217400 2218557 . - . ID=gene2185;Dbxref=EcoGene:EG12011,GeneID:946660;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;gene_synonym=ECK2123,JW2118;locus_tag=b2130 NC_000913.3 RefSeq CDS 2217400 2218557 . - 0 ID=cds2114;Parent=gene2185;Dbxref=ASAP:ABE-0007038,UniProtKB/Swiss-Prot:P33361,Genbank:NP_416634.1,EcoGene:EG12011,GeneID:946660;Name=NP_416634.1;Note=putative transport system permease protein;gbkey=CDS;gene=yehY;product=putative ABC transporter permease;protein_id=NP_416634.1;transl_table=11 NC_000913.3 RefSeq gene 2218564 2219481 . - . ID=gene2186;Dbxref=EcoGene:EG12012,GeneID:946681;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;gene_synonym=ECK2124,JW2119,yehZ;locus_tag=b2131 NC_000913.3 RefSeq CDS 2218564 2219481 . - 0 ID=cds2115;Parent=gene2186;Dbxref=ASAP:ABE-0007040,UniProtKB/Swiss-Prot:P33362,Genbank:NP_416635.1,EcoGene:EG12012,GeneID:946681;Name=NP_416635.1;Note=putative transport system permease protein;gbkey=CDS;gene=osmF;product=putative ABC transporter periplasmic binding protein;protein_id=NP_416635.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2219625 2219658 . + . ID=id262;Note=REP152 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2219692 2221989 . - . ID=gene2187;Dbxref=EcoGene:EG12013,GeneID:946682;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;gene_synonym=ECK2125,glh,JW2120,yohA;locus_tag=b2132 NC_000913.3 RefSeq CDS 2219692 2221989 . - 0 ID=cds2116;Parent=gene2187;Dbxref=ASAP:ABE-0007043,UniProtKB/Swiss-Prot:P33363,Genbank:NP_416636.1,EcoGene:EG12013,GeneID:946682;Name=NP_416636.1;gbkey=CDS;gene=bglX;product=beta-D-glucoside glucohydrolase%2C periplasmic;protein_id=NP_416636.1;transl_table=11 NC_000913.3 RefSeq gene 2222185 2223900 . + . ID=gene2188;Dbxref=EcoGene:EG10231,GeneID:946653;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;gene_synonym=ECK2126,JW2121;locus_tag=b2133 NC_000913.3 RefSeq CDS 2222185 2223900 . + 0 ID=cds2117;Parent=gene2188;Dbxref=ASAP:ABE-0007048,UniProtKB/Swiss-Prot:P06149,Genbank:NP_416637.1,EcoGene:EG10231,GeneID:946653;Name=NP_416637.1;Note=D-lactate dehydrogenase%2C FAD protein%2C NADH independent;gbkey=CDS;gene=dld;product=D-lactate dehydrogenase%2C FAD-binding%2C NADH independent;protein_id=NP_416637.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2223905 2223932 . + . ID=id263;Note=REP153 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2223938 2224870 . - . ID=gene2189;Dbxref=EcoGene:EG12015,GeneID:946662;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;gene_synonym=ECK2127,JW5355,psv,yohB;locus_tag=b2134 NC_000913.3 RefSeq CDS 2223938 2224870 . - 0 ID=cds2118;Parent=gene2189;Dbxref=ASAP:ABE-0007050,UniProtKB/Swiss-Prot:P0AFI5,Genbank:NP_416638.4,EcoGene:EG12015,GeneID:946662;Name=NP_416638.4;Note=penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=NP_416638.4;transl_table=11 NC_000913.3 RefSeq gene 2225044 2225631 . - . ID=gene2190;Dbxref=EcoGene:EG12016,GeneID:946666;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;gene_synonym=ECK2128,JW5356;locus_tag=b2135 NC_000913.3 RefSeq CDS 2225044 2225631 . - 0 ID=cds2119;Parent=gene2190;Dbxref=ASAP:ABE-0007053,UniProtKB/Swiss-Prot:P0AD17,Genbank:NP_416639.2,EcoGene:EG12016,GeneID:946666;Name=NP_416639.2;gbkey=CDS;gene=yohC;product=Yip1 family inner membrane protein;protein_id=NP_416639.2;transl_table=11 NC_000913.3 RefSeq gene 2225801 2226379 . + . ID=gene2191;Dbxref=EcoGene:EG12017,GeneID:946661;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;gene_synonym=ECK2129,JW2124;locus_tag=b2136 NC_000913.3 RefSeq CDS 2225801 2226379 . + 0 ID=cds2120;Parent=gene2191;Dbxref=ASAP:ABE-0007059,UniProtKB/Swiss-Prot:P33366,Genbank:NP_416640.2,EcoGene:EG12017,GeneID:946661;Name=NP_416640.2;gbkey=CDS;gene=yohD;product=DedA family inner membrane protein;protein_id=NP_416640.2;transl_table=11 NC_000913.3 RefSeq repeat_region 2226385 2226468 . + . ID=id264;Note=REP154 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2226509 2227270 . - . ID=gene2192;Dbxref=EcoGene:EG12019,GeneID:949126;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;gene_synonym=ECK2130,JW2125,yohE;locus_tag=b2137 NC_000913.3 RefSeq CDS 2226509 2227270 . - 0 ID=cds2121;Parent=gene2192;Dbxref=ASAP:ABE-0007062,UniProtKB/Swiss-Prot:P33368,Genbank:NP_416641.1,EcoGene:EG12019,GeneID:949126;Name=NP_416641.1;Note=putative oxidoreductase;gbkey=CDS;gene=yohF;product=putative oxidoreductase;protein_id=NP_416641.1;transl_table=11 NC_000913.3 RefSeq gene 2227323 2228758 . - . ID=gene2193;Dbxref=EcoGene:EG12020,GeneID:949123;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=pseudogene;gene_synonym=ECK2131,JW5838,yohG,yohH;locus_tag=b2139;pseudo=true NC_000913.3 RefSeq CDS 2228609 2228758 . - 0 ID=cds2122;Parent=gene2193;Dbxref=ASAP:ABE-0007067,ASAP:ABE-0007071,UniProtKB/Swiss-Prot:P33369,EcoGene:EG12020,GeneID:949123;Note=pseudogene~putative channel/filament proteins;gbkey=CDS;gene=mdtQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2227323 2228609 . - 0 ID=cds2122;Parent=gene2193;Dbxref=ASAP:ABE-0007067,ASAP:ABE-0007071,UniProtKB/Swiss-Prot:P33369,EcoGene:EG12020,GeneID:949123;Note=pseudogene~putative channel/filament proteins;gbkey=CDS;gene=mdtQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2228982 2229065 . + . ID=gene2194;Dbxref=EcoGene:EG14484,GeneID:7751636;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;gene_synonym=ECK4494;locus_tag=b4679 NC_000913.3 RefSeq CDS 2228982 2229065 . + 0 ID=cds2123;Parent=gene2194;Dbxref=UniProtKB/Swiss-Prot:C1P609,Genbank:YP_002791249.1,EcoGene:EG14484,GeneID:7751636;Name=YP_002791249.1;gbkey=CDS;gene=yohP;product=uncharacterized protein;protein_id=YP_002791249.1;transl_table=11 NC_000913.3 RefSeq gene 2229438 2230385 . - . ID=gene2195;Dbxref=EcoGene:EG12022,GeneID:945458;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;gene_synonym=ECK2133,JW2128,yohI;locus_tag=b2140 NC_000913.3 RefSeq CDS 2229438 2230385 . - 0 ID=cds2124;Parent=gene2195;Dbxref=ASAP:ABE-0007074,UniProtKB/Swiss-Prot:P33371,Genbank:NP_416645.1,EcoGene:EG12022,GeneID:945458;Name=NP_416645.1;Note=putative regulator protein;gbkey=CDS;gene=dusC;product=tRNA-dihydrouridine synthase C;protein_id=NP_416645.1;transl_table=11 NC_000913.3 RefSeq gene 2230624 2231022 . + . ID=gene2196;Dbxref=EcoGene:EG12023,GeneID:949127;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;gene_synonym=ECK2134,JW2129;locus_tag=b2141 NC_000913.3 RefSeq CDS 2230624 2231022 . + 0 ID=cds2125;Parent=gene2196;Dbxref=ASAP:ABE-0007078,UniProtKB/Swiss-Prot:P60632,Genbank:NP_416646.1,EcoGene:EG12023,GeneID:949127;Name=NP_416646.1;gbkey=CDS;gene=yohJ;product=UPF0299 family inner membrane protein;protein_id=NP_416646.1;transl_table=11 NC_000913.3 RefSeq gene 2231019 2231714 . + . ID=gene2197;Dbxref=EcoGene:EG12024,GeneID:949125;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;gene_synonym=ECK2135,JW2130;locus_tag=b2142 NC_000913.3 RefSeq CDS 2231019 2231714 . + 0 ID=cds2126;Parent=gene2197;Dbxref=ASAP:ABE-0007080,UniProtKB/Swiss-Prot:P0AD19,Genbank:NP_416647.1,EcoGene:EG12024,GeneID:949125;Name=NP_416647.1;Note=putative seritonin transporter;gbkey=CDS;gene=yohK;product=LrgB family inner membrane protein;protein_id=NP_416647.1;transl_table=11 NC_000913.3 RefSeq gene 2231844 2232728 . + . ID=gene2198;Dbxref=EcoGene:EG10137,GeneID:946663;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;gene_synonym=ECK2136,JW2131;locus_tag=b2143 NC_000913.3 RefSeq CDS 2231844 2232728 . + 0 ID=cds2127;Parent=gene2198;Dbxref=ASAP:ABE-0007086,UniProtKB/Swiss-Prot:P0ABF6,Genbank:NP_416648.1,EcoGene:EG10137,GeneID:946663;Name=NP_416648.1;gbkey=CDS;gene=cdd;product=cytidine/deoxycytidine deaminase;protein_id=NP_416648.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2232736 2232769 . + . ID=id265;Note=REP155 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2232878 2233597 . + . ID=gene2199;Dbxref=EcoGene:EG12025,GeneID:949003;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;gene_synonym=ECK2137,JW2132,sfiX,yeiF;locus_tag=b2144 NC_000913.3 RefSeq CDS 2232878 2233597 . + 0 ID=cds2128;Parent=gene2199;Dbxref=ASAP:ABE-0007091,UniProtKB/Swiss-Prot:P0AFY2,Genbank:NP_416649.1,EcoGene:EG12025,GeneID:949003;Name=NP_416649.1;Note=vancomycin sensitivity%3B sanA mutant has a defective envelope more permeable to vancomycin at 42 degrees;gbkey=CDS;gene=sanA;product=DUF218 superfamily vancomycin high temperature exclusion protein;protein_id=NP_416649.1;transl_table=11 NC_000913.3 RefSeq gene 2233600 2233839 . + . ID=gene2200;Dbxref=EcoGene:EG14073,GeneID:948983;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;gene_synonym=ECK2138,JW5359;locus_tag=b2145 NC_000913.3 RefSeq CDS 2233600 2233839 . + 0 ID=cds2129;Parent=gene2200;Dbxref=ASAP:ABE-0007093,UniProtKB/Swiss-Prot:P64536,Genbank:NP_416650.1,EcoGene:EG14073,GeneID:948983;Name=NP_416650.1;gbkey=CDS;gene=yeiS;product=DUF2542 family protein;protein_id=NP_416650.1;transl_table=11 NC_000913.3 RefSeq gene 2234033 2235271 . + . ID=gene2201;Dbxref=EcoGene:EG14074,GeneID:949049;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;gene_synonym=dpdA,ECK2139,JW2133,preB,yeiT;locus_tag=b2146 NC_000913.3 RefSeq CDS 2234033 2235271 . + 0 ID=cds2130;Parent=gene2201;Dbxref=ASAP:ABE-0007096,UniProtKB/Swiss-Prot:P76440,Genbank:NP_416651.1,EcoGene:EG14074,GeneID:949049;Name=NP_416651.1;Note=putative oxidoreductase;gbkey=CDS;gene=preT;product=dihydropyrimidine dehydrogenase%2C NADH-dependent%2C subunit N;protein_id=NP_416651.1;transl_table=11 NC_000913.3 RefSeq gene 2235265 2236500 . + . ID=gene2202;Dbxref=EcoGene:EG11289,GeneID:949037;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;gene_synonym=ECK2140,JW2134,yeiA;locus_tag=b2147 NC_000913.3 RefSeq CDS 2235265 2236500 . + 0 ID=cds2131;Parent=gene2202;Dbxref=ASAP:ABE-0007098,UniProtKB/Swiss-Prot:P25889,Genbank:NP_416652.4,EcoGene:EG11289,GeneID:949037;Name=NP_416652.4;Note=putative oxidoreductase;gbkey=CDS;gene=preA;product=dihydropyrimidine dehydrogenase%2C NADH-dependent%2C subunit C;protein_id=NP_416652.4;transl_table=11 NC_000913.3 RefSeq repeat_region 2236534 2236683 . + . ID=id266;Note=REP156 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2236743 2237753 . - . ID=gene2203;Dbxref=EcoGene:EG10594,GeneID:949039;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;gene_synonym=ECK2141,JW2135,mglP;locus_tag=b2148 NC_000913.3 RefSeq CDS 2236743 2237753 . - 0 ID=cds2132;Parent=gene2203;Dbxref=ASAP:ABE-0007101,UniProtKB/Swiss-Prot:P23200,Genbank:NP_416653.1,EcoGene:EG10594,GeneID:949039;Name=NP_416653.1;Note=methyl-galactoside transport and galactose taxis%3B membrane component of ABC superfamily;gbkey=CDS;gene=mglC;product=methyl-galactoside transporter subunit;protein_id=NP_416653.1;transl_table=11 NC_000913.3 RefSeq gene 2237769 2239289 . - . ID=gene2204;Dbxref=EcoGene:EG10592,GeneID:949036;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;gene_synonym=ECK2142,JW2136,mglP;locus_tag=b2149 NC_000913.3 RefSeq CDS 2237769 2239289 . - 0 ID=cds2133;Parent=gene2204;Dbxref=ASAP:ABE-0007103,UniProtKB/Swiss-Prot:P0AAG8,Genbank:NP_416654.1,EcoGene:EG10592,GeneID:949036;Name=NP_416654.1;Note=ATP-binding component of methyl-galactoside transport and galactose taxis;gbkey=CDS;gene=mglA;product=methyl-galactoside ABC transporter ATPase;protein_id=NP_416654.1;transl_table=11 NC_000913.3 RefSeq gene 2239350 2240348 . - . ID=gene2205;Dbxref=EcoGene:EG10593,GeneID:949041;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;gene_synonym=ECK2143,JW2137;locus_tag=b2150 NC_000913.3 RefSeq CDS 2239350 2240348 . - 0 ID=cds2134;Parent=gene2205;Dbxref=ASAP:ABE-0007108,UniProtKB/Swiss-Prot:P0AEE5,Genbank:NP_416655.1,EcoGene:EG10593,GeneID:949041;Name=NP_416655.1;Note=galactose-binding transport protein%3B receptor for galactose taxis%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=mglB;product=methyl-galactoside transporter subunit;protein_id=NP_416655.1;transl_table=11 NC_000913.3 RefSeq gene 2240628 2241668 . - . ID=gene2206;Dbxref=EcoGene:EG10365,GeneID:949043;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;gene_synonym=ECK2144,JW2138,mglD;locus_tag=b2151 NC_000913.3 RefSeq CDS 2240628 2241668 . - 0 ID=cds2135;Parent=gene2206;Dbxref=ASAP:ABE-0007110,UniProtKB/Swiss-Prot:P25748,Genbank:NP_416656.1,EcoGene:EG10365,GeneID:949043;Name=NP_416656.1;Note=mgl repressor%2C galactose operon inducer;gbkey=CDS;gene=galS;product=galactose- and fucose-inducible galactose regulon transcriptional isorepressor%3B mgl operon transcriptional repressor%3B autorepressor;protein_id=NP_416656.1;transl_table=11 NC_000913.3 RefSeq gene 2241810 2242967 . - . ID=gene2207;Dbxref=EcoGene:EG11290,GeneID:949044;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;gene_synonym=ECK2145,JW2139;locus_tag=b2152 NC_000913.3 RefSeq CDS 2241810 2242967 . - 0 ID=cds2136;Parent=gene2207;Dbxref=ASAP:ABE-0007115,UniProtKB/Swiss-Prot:P25747,Genbank:NP_416657.1,EcoGene:EG11290,GeneID:949044;Name=NP_416657.1;gbkey=CDS;gene=yeiB;product=DUF418 family putative inner membrane protein;protein_id=NP_416657.1;transl_table=11 NC_000913.3 RefSeq gene 2242984 2243652 . - . ID=gene2208;Dbxref=EcoGene:EG11375,GeneID:949040;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;gene_synonym=ECK2146,JW2140;locus_tag=b2153 NC_000913.3 RefSeq CDS 2242984 2243652 . - 0 ID=cds2137;Parent=gene2208;Dbxref=ASAP:ABE-0007117,UniProtKB/Swiss-Prot:P0A6T5,Genbank:NP_416658.1,EcoGene:EG11375,GeneID:949040;Name=NP_416658.1;gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=NP_416658.1;transl_table=11 NC_000913.3 RefSeq gene 2243910 2244746 . + . ID=gene2209;Dbxref=EcoGene:EG12026,GeneID:949045;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;gene_synonym=ECK2147,JW2141;locus_tag=b2154 NC_000913.3 RefSeq CDS 2243910 2244746 . + 0 ID=cds2138;Parent=gene2209;Dbxref=ASAP:ABE-0007124,UniProtKB/Swiss-Prot:P33018,Genbank:NP_416659.1,EcoGene:EG12026,GeneID:949045;Name=NP_416659.1;Note=putative esterase;gbkey=CDS;gene=yeiG;product=S-formylglutathione hydrolase;protein_id=NP_416659.1;transl_table=11 NC_000913.3 RefSeq gene 2244778 2246769 . - . ID=gene2210;Dbxref=EcoGene:EG10155,GeneID:949042;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;gene_synonym=cir,ECK2148,feuA,JW2142;locus_tag=b2155 NC_000913.3 RefSeq CDS 2244778 2246769 . - 0 ID=cds2139;Parent=gene2210;Dbxref=ASAP:ABE-0007126,UniProtKB/Swiss-Prot:P17315,Genbank:NP_416660.1,EcoGene:EG10155,GeneID:949042;Name=NP_416660.1;Note=ferric iron outer membrane transporter%2C TonB-dependent%3B surface receptor and translocator for colicin I;gbkey=CDS;gene=cirA;product=colicin IA outer membrane receptor and translocator%3B ferric iron-catecholate transporter;protein_id=NP_416660.1;transl_table=11 NC_000913.3 RefSeq gene 2247063 2248532 . - . ID=gene2211;Dbxref=EcoGene:EG11337,GeneID:946667;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;gene_synonym=cadR,ECK2149,JW2143;locus_tag=b2156 NC_000913.3 RefSeq CDS 2247063 2248532 . - 0 ID=cds2140;Parent=gene2211;Dbxref=ASAP:ABE-0007131,UniProtKB/Swiss-Prot:P25737,Genbank:NP_416661.1,EcoGene:EG11337,GeneID:946667;Name=NP_416661.1;Note=lysine-specific permease;gbkey=CDS;gene=lysP;product=lysine transporter;protein_id=NP_416661.1;transl_table=11 NC_000913.3 RefSeq gene 2248737 2249618 . - . ID=gene2212;Dbxref=EcoGene:EG12105,GeneID:946657;Name=yeiE;gbkey=Gene;gene=yeiE;gene_biotype=protein_coding;gene_synonym=ECK2150,JW2144;locus_tag=b2157 NC_000913.3 RefSeq CDS 2248737 2249618 . - 0 ID=cds2141;Parent=gene2212;Dbxref=ASAP:ABE-0007138,UniProtKB/Swiss-Prot:P0ACR4,Genbank:NP_416662.1,EcoGene:EG12105,GeneID:946657;Name=NP_416662.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yeiE;product=putative DNA-binding transcriptional regulator;protein_id=NP_416662.1;transl_table=11 NC_000913.3 RefSeq gene 2249717 2250766 . + . ID=gene2213;Dbxref=EcoGene:EG12027,GeneID:946668;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;gene_synonym=ECK2151,JW2145;locus_tag=b2158 NC_000913.3 RefSeq CDS 2249717 2250766 . + 0 ID=cds2142;Parent=gene2213;Dbxref=ASAP:ABE-0007142,UniProtKB/Swiss-Prot:P62723,Genbank:NP_416663.1,EcoGene:EG12027,GeneID:946668;Name=NP_416663.1;gbkey=CDS;gene=yeiH;product=UPF0324 family inner membrane protein;protein_id=NP_416663.1;transl_table=11 NC_000913.3 RefSeq gene 2250840 2251697 . + . ID=gene2214;Dbxref=EcoGene:EG10651,GeneID:946669;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;gene_synonym=ECK2152,JW2146;locus_tag=b2159 NC_000913.3 RefSeq CDS 2250840 2251697 . + 0 ID=cds2143;Parent=gene2214;Dbxref=ASAP:ABE-0007146,UniProtKB/Swiss-Prot:P0A6C1,Genbank:NP_416664.1,EcoGene:EG10651,GeneID:946669;Name=NP_416664.1;Note=endonuclease IV;gbkey=CDS;gene=nfo;product=endonuclease IV with intrinsic 3'-5' exonuclease activity;protein_id=NP_416664.1;transl_table=11 NC_000913.3 RefSeq gene 2251700 2252788 . + . ID=gene2215;Dbxref=EcoGene:EG12028,GeneID:946640;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;gene_synonym=ECK2153,JW2147;locus_tag=b2160 NC_000913.3 RefSeq CDS 2251700 2252788 . + 0 ID=cds2144;Parent=gene2215;Dbxref=ASAP:ABE-0007149,UniProtKB/Swiss-Prot:P33020,Genbank:NP_416665.1,EcoGene:EG12028,GeneID:946640;Name=NP_416665.1;Note=putative kinase;gbkey=CDS;gene=yeiI;product=putative kinase;protein_id=NP_416665.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2252796 2252886 . + . ID=id267;Note=RIP157 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2252895 2254145 . - . ID=gene2216;Dbxref=EcoGene:EG12029,GeneID:946655;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;gene_synonym=ECK2154,JW2148,yeiJ;locus_tag=b2161 NC_000913.3 RefSeq CDS 2252895 2254145 . - 0 ID=cds2145;Parent=gene2216;Dbxref=ASAP:ABE-0007152,UniProtKB/Swiss-Prot:P33021,Genbank:NP_416666.1,EcoGene:EG12029,GeneID:946655;Name=NP_416666.1;Note=putative pyrimidine nucleoside transporter;gbkey=CDS;gene=nupX;product=nucleoside permease;protein_id=NP_416666.1;transl_table=11 NC_000913.3 RefSeq gene 2254245 2255186 . - . ID=gene2217;Dbxref=EcoGene:EG12030,GeneID:946646;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;gene_synonym=ECK2155,JW2149,yeiK;locus_tag=b2162 NC_000913.3 RefSeq CDS 2254245 2255186 . - 0 ID=cds2146;Parent=gene2217;Dbxref=ASAP:ABE-0007156,UniProtKB/Swiss-Prot:P33022,Genbank:NP_416667.1,EcoGene:EG12030,GeneID:946646;Name=NP_416667.1;gbkey=CDS;gene=rihB;product=ribonucleoside hydrolase 2;protein_id=NP_416667.1;transl_table=11 NC_000913.3 RefSeq gene 2255355 2256014 . + . ID=gene2218;Dbxref=EcoGene:EG12031,GeneID:946670;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;gene_synonym=ECK2156,JW2150;locus_tag=b2163 NC_000913.3 RefSeq CDS 2255355 2256014 . + 0 ID=cds2147;Parent=gene2218;Dbxref=ASAP:ABE-0007160,UniProtKB/Swiss-Prot:P0A9E9,Genbank:NP_416668.3,EcoGene:EG12031,GeneID:946670;Name=NP_416668.3;Note=stationary phase nitrogen starvation regulator;gbkey=CDS;gene=yeiL;product=putative transcriptional regulator;protein_id=NP_416668.3;transl_table=11 NC_000913.3 RefSeq repeat_region 2256038 2256074 . + . ID=id268;Note=REP158 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2256085 2257335 . - . ID=gene2219;Dbxref=EcoGene:EG12032,GeneID:946671;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;gene_synonym=ECK2157,JW2151,pscT,yeiM;locus_tag=b2164 NC_000913.3 RefSeq CDS 2256085 2257335 . - 0 ID=cds2148;Parent=gene2219;Dbxref=ASAP:ABE-0007163,UniProtKB/Swiss-Prot:P33024,Genbank:NP_416669.1,EcoGene:EG12032,GeneID:946671;Name=NP_416669.1;Note=putative transport system permease protein;gbkey=CDS;gene=psuT;product=putative nucleoside transporter;protein_id=NP_416669.1;transl_table=11 NC_000913.3 RefSeq gene 2257429 2258367 . - . ID=gene2220;Dbxref=EcoGene:EG12033,GeneID:946699;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;gene_synonym=ECK2158,JW2152,pscG,yeiN;locus_tag=b2165 NC_000913.3 RefSeq CDS 2257429 2258367 . - 0 ID=cds2149;Parent=gene2220;Dbxref=ASAP:ABE-0007165,UniProtKB/Swiss-Prot:P33025,Genbank:NP_416670.1,EcoGene:EG12033,GeneID:946699;Name=NP_416670.1;gbkey=CDS;gene=psuG;product=pseudouridine 5'-phosphate glycosidase;protein_id=NP_416670.1;transl_table=11 NC_000913.3 RefSeq gene 2258355 2259296 . - . ID=gene2221;Dbxref=EcoGene:EG11646,GeneID:946664;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;gene_synonym=ECK2159,JW2153,pscK,yeiC;locus_tag=b2166 NC_000913.3 RefSeq CDS 2258355 2259296 . - 0 ID=cds2150;Parent=gene2221;Dbxref=ASAP:ABE-0007168,UniProtKB/Swiss-Prot:P30235,Genbank:NP_416671.1,EcoGene:EG11646,GeneID:946664;Name=NP_416671.1;Note=putative kinase;gbkey=CDS;gene=psuK;product=pseudouridine kinase;protein_id=NP_416671.1;transl_table=11 NC_000913.3 RefSeq gene 2259719 2261410 . - . ID=gene2222;Dbxref=EcoGene:EG10336,GeneID:946672;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;gene_synonym=ECK2160,JW2154,ptsF;locus_tag=b2167 NC_000913.3 RefSeq CDS 2259719 2261410 . - 0 ID=cds2151;Parent=gene2222;Dbxref=ASAP:ABE-0007172,UniProtKB/Swiss-Prot:P20966,Genbank:NP_416672.1,EcoGene:EG10336,GeneID:946672;Name=NP_416672.1;Note=PTS system%2C fructose-specific transport protein;gbkey=CDS;gene=fruA;product=fused fructose-specific PTS enzymes: IIBcomponent/IIC components;protein_id=NP_416672.1;transl_table=11 NC_000913.3 RefSeq gene 2261427 2262365 . - . ID=gene2223;Dbxref=EcoGene:EG10337,GeneID:946676;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;gene_synonym=ECK2161,fpk,JW2155;locus_tag=b2168 NC_000913.3 RefSeq CDS 2261427 2262365 . - 0 ID=cds2152;Parent=gene2223;Dbxref=ASAP:ABE-0007174,UniProtKB/Swiss-Prot:P0AEW9,Genbank:NP_416673.1,EcoGene:EG10337,GeneID:946676;Name=NP_416673.1;gbkey=CDS;gene=fruK;product=fructose-1-phosphate kinase;protein_id=NP_416673.1;transl_table=11 NC_000913.3 RefSeq gene 2262365 2263495 . - . ID=gene2224;Dbxref=EcoGene:EG10005,GeneID:946677;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;gene_synonym=ECK2162,fpr,fruF,JW2156;locus_tag=b2169 NC_000913.3 RefSeq CDS 2262365 2263495 . - 0 ID=cds2153;Parent=gene2224;Dbxref=ASAP:ABE-0007180,UniProtKB/Swiss-Prot:P69811,Genbank:NP_416674.1,EcoGene:EG10005,GeneID:946677;Name=NP_416674.1;Note=PTS system%2C fructose-specific IIA/fpr component;gbkey=CDS;gene=fruB;product=fused fructose-specific PTS enzymes: IIA component/HPr component;protein_id=NP_416674.1;transl_table=11 NC_000913.3 RefSeq gene 2263863 2265044 . + . ID=gene2225;Dbxref=EcoGene:EG12034,GeneID:946673;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;gene_synonym=ECK2163,JW2157,yeiO;locus_tag=b2170 NC_000913.3 RefSeq CDS 2263863 2265044 . + 0 ID=cds2154;Parent=gene2225;Dbxref=ASAP:ABE-0007184,UniProtKB/Swiss-Prot:P33026,Genbank:NP_416675.1,EcoGene:EG12034,GeneID:946673;Name=NP_416675.1;gbkey=CDS;gene=setB;product=lactose/glucose efflux system;protein_id=NP_416675.1;transl_table=11 NC_000913.3 RefSeq gene 2265041 2265295 . - . ID=gene2226;Dbxref=EcoGene:EG14375,GeneID:4056031;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;gene_synonym=ECK2164,JW5361;locus_tag=b4502 NC_000913.3 RefSeq CDS 2265041 2265295 . - 0 ID=cds2155;Parent=gene2226;Dbxref=ASAP:ABE-0285016,UniProtKB/Swiss-Prot:P0AFT8,Genbank:YP_588461.1,EcoGene:EG14375,GeneID:4056031;Name=YP_588461.1;gbkey=CDS;gene=yeiW;product=UPF0153 cysteine cluster protein;protein_id=YP_588461.1;transl_table=11 NC_000913.3 RefSeq gene 2265450 2266022 . + . ID=gene2227;Dbxref=EcoGene:EG12035,GeneID:946674;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;gene_synonym=ECK2165,JW5362;locus_tag=b2171 NC_000913.3 RefSeq CDS 2265450 2266022 . + 0 ID=cds2156;Parent=gene2227;Dbxref=ASAP:ABE-0007187,UniProtKB/Swiss-Prot:P0A6N8,Genbank:NP_416676.4,EcoGene:EG12035,GeneID:946674;Name=NP_416676.4;Note=putative elongation factor;gbkey=CDS;gene=yeiP;product=elongation factor P-like protein;protein_id=NP_416676.4;transl_table=11 NC_000913.3 RefSeq gene 2266245 2267711 . + . ID=gene2228;Dbxref=EcoGene:EG12036,GeneID:946688;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;gene_synonym=ECK2166,JW2160;locus_tag=b2172 NC_000913.3 RefSeq CDS 2266245 2267711 . + 0 ID=cds2157;Parent=gene2228;Dbxref=ASAP:ABE-0007191,UniProtKB/Swiss-Prot:P33029,Genbank:NP_416677.1,EcoGene:EG12036,GeneID:946688;Name=NP_416677.1;Note=putative oxidoreductase;gbkey=CDS;gene=yeiQ;product=putative NAD-dependent D-mannonate oxidoreductase;protein_id=NP_416677.1;transl_table=11 NC_000913.3 RefSeq gene 2267829 2268815 . + . ID=gene2229;Dbxref=EcoGene:EG12104,GeneID:946701;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;gene_synonym=ECK2167,JW2161;locus_tag=b2173 NC_000913.3 RefSeq CDS 2267829 2268815 . + 0 ID=cds2158;Parent=gene2229;Dbxref=ASAP:ABE-0007194,UniProtKB/Swiss-Prot:P33030,Genbank:NP_416678.1,EcoGene:EG12104,GeneID:946701;Name=NP_416678.1;gbkey=CDS;gene=yeiR;product=Zn-stimulated GTPase involved in zinc homeostasis%3B mutants are cadmium and EDTA sensitive%3B Zn(2+) binding protein;protein_id=NP_416678.1;transl_table=11 NC_000913.3 RefSeq gene 2268854 2269567 . + . ID=gene2230;Dbxref=EcoGene:EG14075,GeneID:946693;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;gene_synonym=ECK2168,JW2162,yeiU;locus_tag=b2174 NC_000913.3 RefSeq CDS 2268854 2269567 . + 0 ID=cds2159;Parent=gene2230;Dbxref=ASAP:ABE-0007196,UniProtKB/Swiss-Prot:P76445,Genbank:NP_416679.4,EcoGene:EG14075,GeneID:946693;Name=NP_416679.4;gbkey=CDS;gene=lpxT;product=lipid A 1-diphosphate synthase%3B undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase;protein_id=NP_416679.4;transl_table=11 NC_000913.3 RefSeq gene 2269979 2270545 . + . ID=gene2231;Dbxref=EcoGene:EG14076,GeneID:946686;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;gene_synonym=ECK2169,JW2163,spr,yeiV;locus_tag=b2175 NC_000913.3 RefSeq CDS 2269979 2270545 . + 0 ID=cds2160;Parent=gene2231;Dbxref=ASAP:ABE-0007200,UniProtKB/Swiss-Prot:P0AFV4,Genbank:NP_416680.1,EcoGene:EG14076,GeneID:946686;Name=NP_416680.1;Note=putative lipoprotein;gbkey=CDS;gene=mepS;product=murein DD-endopeptidase%2C space-maker hydrolase%2C mutational suppressor of prc thermosensitivity%2C outer membrane lipoprotein%2C weak murein LD-carboxypeptidase;protein_id=NP_416680.1;transl_table=11 NC_000913.3 RefSeq gene 2270726 2272282 . + . ID=gene2232;Dbxref=EcoGene:EG14077,GeneID:946695;Name=rtn;gbkey=Gene;gene=rtn;gene_biotype=protein_coding;gene_synonym=ECK2170,JW2164;locus_tag=b2176 NC_000913.3 RefSeq CDS 2270726 2272282 . + 0 ID=cds2161;Parent=gene2232;Dbxref=ASAP:ABE-0007203,UniProtKB/Swiss-Prot:P76446,Genbank:NP_416681.1,EcoGene:EG14077,GeneID:946695;Name=NP_416681.1;gbkey=CDS;gene=rtn;product=resistance protein for phages lambda and N4%2C putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=NP_416681.1;transl_table=11 NC_000913.3 RefSeq gene 2272364 2274178 . + . ID=gene2233;Dbxref=EcoGene:EG12037,GeneID:946675;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;gene_synonym=ECK2171,JW2165;locus_tag=b2177 NC_000913.3 RefSeq CDS 2272364 2274178 . + 0 ID=cds2162;Parent=gene2233;Dbxref=ASAP:ABE-0007206,UniProtKB/Swiss-Prot:P33913,Genbank:NP_416682.4,EcoGene:EG12037,GeneID:946675;Name=NP_416682.4;Note=periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=yejA;product=microcin C ABC transporter periplasmic binding protein;protein_id=NP_416682.4;transl_table=11 NC_000913.3 RefSeq gene 2274179 2275273 . + . ID=gene2234;Dbxref=EcoGene:EG12038,GeneID:946679;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;gene_synonym=ECK2172,JW2166;locus_tag=b2178 NC_000913.3 RefSeq CDS 2274179 2275273 . + 0 ID=cds2163;Parent=gene2234;Dbxref=ASAP:ABE-0007208,UniProtKB/Swiss-Prot:P0AFU0,Genbank:NP_416683.1,EcoGene:EG12038,GeneID:946679;Name=NP_416683.1;Note=putative transport system permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=yejB;product=microcin C ABC transporter permease;protein_id=NP_416683.1;transl_table=11 NC_000913.3 RefSeq gene 2275273 2276298 . + . ID=gene2235;Dbxref=EcoGene:EG12040,GeneID:946683;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;gene_synonym=ECK2173,JW2167;locus_tag=b2179 NC_000913.3 RefSeq CDS 2275273 2276298 . + 0 ID=cds2164;Parent=gene2235;Dbxref=ASAP:ABE-0007210,UniProtKB/Swiss-Prot:P33915,Genbank:NP_416684.1,EcoGene:EG12040,GeneID:946683;Name=NP_416684.1;Note=putative transport system permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=yejE;product=microcin C ABC transporter permease;protein_id=NP_416684.1;transl_table=11 NC_000913.3 RefSeq gene 2276300 2277889 . + . ID=gene2236;Dbxref=EcoGene:EG12041,GeneID:946689;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;gene_synonym=ECK2174,JW2168;locus_tag=b2180 NC_000913.3 RefSeq CDS 2276300 2277889 . + 0 ID=cds2165;Parent=gene2236;Dbxref=ASAP:ABE-0007212,UniProtKB/Swiss-Prot:P33916,Genbank:NP_416685.1,EcoGene:EG12041,GeneID:946689;Name=NP_416685.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yejF;product=microcin C ABC transporter ATPase;protein_id=NP_416685.1;transl_table=11 NC_000913.3 RefSeq gene 2277893 2278237 . - . ID=gene2237;Dbxref=EcoGene:EG12042,GeneID:945319;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;gene_synonym=ECK2175,JW2169;locus_tag=b2181 NC_000913.3 RefSeq CDS 2277893 2278237 . - 0 ID=cds2166;Parent=gene2237;Dbxref=ASAP:ABE-0007214,UniProtKB/Swiss-Prot:P0AD21,Genbank:NP_416686.1,EcoGene:EG12042,GeneID:945319;Name=NP_416686.1;gbkey=CDS;gene=yejG;product=uncharacterized protein;protein_id=NP_416686.1;transl_table=11 NC_000913.3 RefSeq gene 2278570 2279760 . - . ID=gene2238;Dbxref=EcoGene:EG11419,GeneID:944808;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;gene_synonym=bicA,bicR,ECK2176,JW5363,sur,suxA;locus_tag=b2182 NC_000913.3 RefSeq CDS 2278570 2279760 . - 0 ID=cds2167;Parent=gene2238;Dbxref=ASAP:ABE-0007221,UniProtKB/Swiss-Prot:P28246,Genbank:NP_416687.1,EcoGene:EG11419,GeneID:944808;Name=NP_416687.1;Note=bicyclomycin resistance protein%3B transmembrane protein;gbkey=CDS;gene=bcr;product=bicyclomycin/cysteine/sulfonamide efflux transporter;protein_id=NP_416687.1;transl_table=11 NC_000913.3 RefSeq gene 2279788 2280483 . - . ID=gene2239;Dbxref=EcoGene:EG12044,GeneID:945378;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;gene_synonym=ECK2177,JW2171,yejD;locus_tag=b2183 NC_000913.3 RefSeq CDS 2279788 2280483 . - 0 ID=cds2168;Parent=gene2239;Dbxref=ASAP:ABE-0007223,UniProtKB/Swiss-Prot:P0AA43,Genbank:NP_416688.1,EcoGene:EG12044,GeneID:945378;Name=NP_416688.1;Note=16S pseudouridylate 516 synthase;gbkey=CDS;gene=rsuA;product=16S rRNA pseudouridine(516) synthase;protein_id=NP_416688.1;transl_table=11 NC_000913.3 RefSeq gene 2280632 2282392 . + . ID=gene2240;Dbxref=EcoGene:EG12045,GeneID:945529;Name=yejH;gbkey=Gene;gene=yejH;gene_biotype=protein_coding;gene_synonym=ECK2178,JW2172,yejI,yejJ;locus_tag=b2184 NC_000913.3 RefSeq CDS 2280632 2282392 . + 0 ID=cds2169;Parent=gene2240;Dbxref=ASAP:ABE-0007228,UniProtKB/Swiss-Prot:P33919,Genbank:NP_416689.1,EcoGene:EG12045,GeneID:945529;Name=NP_416689.1;Note=putative ATP-dependent helicase;gbkey=CDS;gene=yejH;product=putative ATP-dependent DNA or RNA helicase;protein_id=NP_416689.1;transl_table=11 NC_000913.3 RefSeq gene 2282517 2282801 . + . ID=gene2241;Dbxref=EcoGene:EG10885,GeneID:945618;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;gene_synonym=ECK2179,JW2173;locus_tag=b2185 NC_000913.3 RefSeq CDS 2282517 2282801 . + 0 ID=cds2170;Parent=gene2241;Dbxref=ASAP:ABE-0007231,UniProtKB/Swiss-Prot:P68919,Genbank:NP_416690.1,EcoGene:EG10885,GeneID:945618;Name=NP_416690.1;gbkey=CDS;gene=rplY;product=50S ribosomal subunit protein L25;protein_id=NP_416690.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2282887 2282920 . + . ID=id269;Note=REP159 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2282940 2283947 . - . ID=gene2242;Dbxref=EcoGene:EG12048,GeneID:946690;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;gene_synonym=ECK2180,JW2174,ndpA;locus_tag=b2186 NC_000913.3 RefSeq CDS 2282940 2283947 . - 0 ID=cds2171;Parent=gene2242;Dbxref=ASAP:ABE-0007234,UniProtKB/Swiss-Prot:P33920,Genbank:NP_416691.1,EcoGene:EG12048,GeneID:946690;Name=NP_416691.1;Note=protein present in spermidine nucleoids;gbkey=CDS;gene=yejK;product=spermidine nucleoid-associated protein;protein_id=NP_416691.1;transl_table=11 NC_000913.3 RefSeq gene 2284129 2284356 . + . ID=gene2243;Dbxref=EcoGene:EG12043,GeneID:946694;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;gene_synonym=ECK2181,JW2175;locus_tag=b2187 NC_000913.3 RefSeq CDS 2284129 2284356 . + 0 ID=cds2172;Parent=gene2243;Dbxref=ASAP:ABE-0007238,UniProtKB/Swiss-Prot:P0AD24,Genbank:NP_416692.1,EcoGene:EG12043,GeneID:946694;Name=NP_416692.1;gbkey=CDS;gene=yejL;product=UPF0352 family protein;protein_id=NP_416692.1;transl_table=11 NC_000913.3 RefSeq gene 2284376 2286136 . + . ID=gene2244;Dbxref=EcoGene:EG12049,GeneID:946685;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;gene_synonym=ECK2182,JW2176,yejN;locus_tag=b2188 NC_000913.3 RefSeq CDS 2284376 2286136 . + 0 ID=cds2173;Parent=gene2244;Dbxref=ASAP:ABE-0007240,UniProtKB/Swiss-Prot:P0AD27,Genbank:NP_416693.1,EcoGene:EG12049,GeneID:946685;Name=NP_416693.1;Note=putative sulfatase;gbkey=CDS;gene=yejM;product=essential inner membrane DUF3413 domain-containing protein%3B lipid A production and membrane permeability factor;protein_id=NP_416693.1;transl_table=11 NC_000913.3 RefSeq gene 2286211 2286287 . + . ID=gene2245;Dbxref=EcoGene:EG30067,GeneID:946320;Name=proL;gbkey=Gene;gene=proL;gene_biotype=tRNA;gene_synonym=ECK2183,JWR0042,proW;locus_tag=b2189 NC_000913.3 RefSeq tRNA 2286211 2286287 . + . ID=rna70;Parent=gene2245;Dbxref=ASAP:ABE-0007242,EcoGene:EG30067,GeneID:946320;Note=anticodon: GGG;gbkey=tRNA;gene=proL;product=tRNA-Pro NC_000913.3 RefSeq exon 2286211 2286287 . + . ID=id270;Parent=rna70;Dbxref=ASAP:ABE-0007242,EcoGene:EG30067,GeneID:946320;Note=anticodon: GGG;gbkey=tRNA;gene=proL;product=tRNA-Pro NC_000913.3 RefSeq gene 2290114 2290180 . - . ID=gene2246;Dbxref=EcoGene:EG12051,GeneID:946867;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=pseudogene;gene_synonym=ECK2184,JW5839;locus_tag=b2190;part=1/2;pseudo=true NC_000913.3 RefSeq gene 2286390 2288914 . - . ID=gene2246;Dbxref=EcoGene:EG12051,GeneID:946867;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=pseudogene;gene_synonym=ECK2184,JW5839;locus_tag=b2190;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 2290114 2290180 . - 0 ID=cds2174;Parent=gene2246;Dbxref=ASAP:ABE-0007244,UniProtKB/Swiss-Prot:P33924,EcoGene:EG12051,GeneID:946867;Note=pseudogene%2C autotransporter outer membrane homology%3Bputative transport%3B Not classified~putative ATP-binding component of a transport system;gbkey=CDS;gene=yejO;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2286390 2288914 . - 2 ID=cds2174;Parent=gene2246;Dbxref=ASAP:ABE-0007244,UniProtKB/Swiss-Prot:P33924,EcoGene:EG12051,GeneID:946867;Note=pseudogene%2C autotransporter outer membrane homology%3Bputative transport%3B Not classified~putative ATP-binding component of a transport system;gbkey=CDS;gene=yejO;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 2288919 2290113 . - . ID=id271;gbkey=mobile_element NC_000913.3 RefSeq gene 2289065 2290081 . - . ID=gene2247;Dbxref=EcoGene:EG40008,GeneID:949121;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b2192 NC_000913.3 RefSeq CDS 2289065 2290081 . - 0 ID=cds2175;Parent=gene2247;Dbxref=ASAP:ABE-0007252,UniProtKB/Swiss-Prot:P0CE55,Genbank:NP_416696.1,EcoGene:EG40008,GeneID:949121;Name=NP_416696.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_416696.1;transl_table=11 NC_000913.3 RefSeq gene 2290500 2291147 . + . ID=gene2248;Dbxref=EcoGene:EG11527,GeneID:949081;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;gene_synonym=ECK2185,JW2181;locus_tag=b2193 NC_000913.3 RefSeq CDS 2290500 2291147 . + 0 ID=cds2176;Parent=gene2248;Dbxref=ASAP:ABE-0007259,UniProtKB/Swiss-Prot:P31802,Genbank:NP_416697.1,EcoGene:EG11527,GeneID:949081;Name=NP_416697.1;Note=nitrate/nitrite response regulator (sensor NarQ);gbkey=CDS;gene=narP;product=response regulator in two-component regulatory system with NarQ;protein_id=NP_416697.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2291153 2291351 . + . ID=id272;Note=RIP160 (repetitive extragenic palindromic) element%3B contains 4 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2291358 2292410 . - . ID=gene2249;Dbxref=EcoGene:EG12052,GeneID:946623;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;gene_synonym=ECK2186,JW2182,yejP;locus_tag=b2194 NC_000913.3 RefSeq CDS 2291358 2292410 . - 0 ID=cds2177;Parent=gene2249;Dbxref=ASAP:ABE-0007262,UniProtKB/Swiss-Prot:P0ABM9,Genbank:NP_416698.1,EcoGene:EG12052,GeneID:946623;Name=NP_416698.1;Note=possible subunit of heme lyase;gbkey=CDS;gene=ccmH;product=heme lyase%2C CcmH subunit;protein_id=NP_416698.1;transl_table=11 NC_000913.3 RefSeq gene 2292407 2292964 . - . ID=gene2250;Dbxref=EcoGene:EG12053,GeneID:949073;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;gene_synonym=ccmG,ECK2187,JW2183,yejQ;locus_tag=b2195 NC_000913.3 RefSeq CDS 2292407 2292964 . - 0 ID=cds2178;Parent=gene2250;Dbxref=ASAP:ABE-0007264,UniProtKB/Swiss-Prot:P0AA86,Genbank:NP_416699.1,EcoGene:EG12053,GeneID:949073;Name=NP_416699.1;gbkey=CDS;gene=dsbE;product=periplasmic thioredoxin of cytochrome c-type biogenesis;protein_id=NP_416699.1;transl_table=11 NC_000913.3 RefSeq gene 2292961 2294904 . - . ID=gene2251;Dbxref=EcoGene:EG12054,GeneID:948783;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;gene_synonym=ECK2188,JW2184,yejR;locus_tag=b2196 NC_000913.3 RefSeq CDS 2292961 2294904 . - 0 ID=cds2179;Parent=gene2251;Dbxref=ASAP:ABE-0007269,UniProtKB/Swiss-Prot:P33927,Genbank:NP_416700.1,EcoGene:EG12054,GeneID:948783;Name=NP_416700.1;Note=cytochrome c-type biogenesis protein;gbkey=CDS;gene=ccmF;product=heme lyase%2C CcmF subunit;protein_id=NP_416700.1;transl_table=11 NC_000913.3 RefSeq gene 2294901 2295380 . - . ID=gene2252;Dbxref=EcoGene:EG12055,GeneID:946697;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;gene_synonym=ECK2189,JW2185,yejS;locus_tag=b2197 NC_000913.3 RefSeq CDS 2294901 2295380 . - 0 ID=cds2180;Parent=gene2252;Dbxref=ASAP:ABE-0007271,UniProtKB/Swiss-Prot:P69490,Genbank:NP_416701.1,EcoGene:EG12055,GeneID:946697;Name=NP_416701.1;Note=cytochrome c biogenesis%2C possible subunit of a heme lyase;gbkey=CDS;gene=ccmE;product=periplasmic heme chaperone;protein_id=NP_416701.1;transl_table=11 NC_000913.3 RefSeq gene 2295377 2295586 . - . ID=gene2253;Dbxref=EcoGene:EG12169,GeneID:946709;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;gene_synonym=ECK2190,JW2186,yojM;locus_tag=b2198 NC_000913.3 RefSeq CDS 2295377 2295586 . - 0 ID=cds2181;Parent=gene2253;Dbxref=ASAP:ABE-0007273,UniProtKB/Swiss-Prot:P0ABM5,Genbank:NP_416702.1,EcoGene:EG12169,GeneID:946709;Name=NP_416702.1;Note=heme exporter protein C;gbkey=CDS;gene=ccmD;product=cytochrome c biogenesis protein%3B heme export ABC transporter holo-CcmE release factor;protein_id=NP_416702.1;transl_table=11 NC_000913.3 RefSeq gene 2295583 2296320 . - . ID=gene2254;Dbxref=EcoGene:EG12057,GeneID:946703;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;gene_synonym=ECK2191,JW2187,yejT,yejU;locus_tag=b2199 NC_000913.3 RefSeq CDS 2295583 2296320 . - 0 ID=cds2182;Parent=gene2254;Dbxref=ASAP:ABE-0007275,UniProtKB/Swiss-Prot:P0ABM1,Genbank:NP_416703.1,EcoGene:EG12057,GeneID:946703;Name=NP_416703.1;Note=heme exporter protein C%3B membrane component of ABC superfamily;gbkey=CDS;gene=ccmC;product=heme export ABC transporter permease%3B CcmE-interacting protein;protein_id=NP_416703.1;transl_table=11 NC_000913.3 RefSeq gene 2296362 2297024 . - . ID=gene2255;Dbxref=EcoGene:EG12058,GeneID:946692;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;gene_synonym=ECK2192,JW2188,yejV;locus_tag=b2200 NC_000913.3 RefSeq CDS 2296362 2297024 . - 0 ID=cds2183;Parent=gene2255;Dbxref=ASAP:ABE-0007277,UniProtKB/Swiss-Prot:P0ABL8,Genbank:NP_416704.1,EcoGene:EG12058,GeneID:946692;Name=NP_416704.1;Note=heme exporter protein B%2C cytochrome c-type biogenesis protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=ccmB;product=heme export ABC transporter permease;protein_id=NP_416704.1;transl_table=11 NC_000913.3 RefSeq gene 2297021 2297644 . - . ID=gene2256;Dbxref=EcoGene:EG12059,GeneID:946714;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;gene_synonym=ECK2193,JW5366,yejW;locus_tag=b2201 NC_000913.3 RefSeq CDS 2297021 2297644 . - 0 ID=cds2184;Parent=gene2256;Dbxref=ASAP:ABE-0007279,UniProtKB/Swiss-Prot:P33931,Genbank:NP_416705.2,EcoGene:EG12059,GeneID:946714;Name=NP_416705.2;Note=ATP binding protein of heme exporter A%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=ccmA;product=heme export ABC transporter ATPase;protein_id=NP_416705.2;transl_table=11 NC_000913.3 RefSeq gene 2297657 2298259 . - . ID=gene2257;Dbxref=EcoGene:EG12060,GeneID:946706;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;gene_synonym=ECK2194,JW2190,yejX;locus_tag=b2202 NC_000913.3 RefSeq CDS 2297657 2298259 . - 0 ID=cds2185;Parent=gene2257;Dbxref=ASAP:ABE-0007281,UniProtKB/Swiss-Prot:P0ABL5,Genbank:NP_416706.1,EcoGene:EG12060,GeneID:946706;Name=NP_416706.1;Note=cytochrome c-type protein;gbkey=CDS;gene=napC;product=quinol dehydrogenase%2C electron source for NapAB;protein_id=NP_416706.1;transl_table=11 NC_000913.3 RefSeq gene 2298269 2298718 . - . ID=gene2258;Dbxref=EcoGene:EG12061,GeneID:946698;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;gene_synonym=ECK2195,JW5367,yejY;locus_tag=b2203 NC_000913.3 RefSeq CDS 2298269 2298718 . - 0 ID=cds2186;Parent=gene2258;Dbxref=ASAP:ABE-0007283,UniProtKB/Swiss-Prot:P0ABL3,Genbank:NP_416707.4,EcoGene:EG12061,GeneID:946698;Name=NP_416707.4;Note=cytochrome c-type protein;gbkey=CDS;gene=napB;product=nitrate reductase%2C small%2C cytochrome C550 subunit%2C periplasmic;protein_id=NP_416707.4;transl_table=11 NC_000913.3 RefSeq gene 2298715 2299578 . - . ID=gene2259;Dbxref=EcoGene:EG12062,GeneID:945984;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;gene_synonym=ECK2196,JW2192,yejZ;locus_tag=b2204 NC_000913.3 RefSeq CDS 2298715 2299578 . - 0 ID=cds2187;Parent=gene2259;Dbxref=ASAP:ABE-0007285,UniProtKB/Swiss-Prot:P33934,Genbank:NP_416708.1,EcoGene:EG12062,GeneID:945984;Name=NP_416708.1;Note=ferredoxin-type protein: electron transfer;gbkey=CDS;gene=napH;product=ferredoxin-type protein;protein_id=NP_416708.1;transl_table=11 NC_000913.3 RefSeq gene 2299565 2300260 . - . ID=gene2260;Dbxref=EcoGene:EG12064,GeneID:945544;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;gene_synonym=ECK2197,JW2193,yojA,yojB;locus_tag=b2205 NC_000913.3 RefSeq CDS 2299565 2300260 . - 0 ID=cds2188;Parent=gene2260;Dbxref=ASAP:ABE-0007287,UniProtKB/Swiss-Prot:P0AAL3,Genbank:NP_416709.1,EcoGene:EG12064,GeneID:945544;Name=NP_416709.1;Note=ferredoxin-type protein: electron transfer;gbkey=CDS;gene=napG;product=ferredoxin-type protein;protein_id=NP_416709.1;transl_table=11 NC_000913.3 RefSeq gene 2300267 2302753 . - . ID=gene2261;Dbxref=EcoGene:EG12067,GeneID:947093;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;gene_synonym=ECK2198,JW2194,yojC,yojD,yojE;locus_tag=b2206 NC_000913.3 RefSeq CDS 2300267 2302753 . - 0 ID=cds2189;Parent=gene2261;Dbxref=ASAP:ABE-0007289,UniProtKB/Swiss-Prot:P33937,Genbank:NP_416710.1,EcoGene:EG12067,GeneID:947093;Name=NP_416710.1;Note=probable nitrate reductase 3;gbkey=CDS;gene=napA;product=nitrate reductase%2C periplasmic%2C large subunit;protein_id=NP_416710.1;transl_table=11 NC_000913.3 RefSeq gene 2302750 2303013 . - . ID=gene2262;Dbxref=EcoGene:EG12143,GeneID:945187;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;gene_synonym=ECK2199,JW2195,yojF;locus_tag=b2207 NC_000913.3 RefSeq CDS 2302750 2303013 . - 0 ID=cds2190;Parent=gene2262;Dbxref=ASAP:ABE-0007291,UniProtKB/Swiss-Prot:P0A9I5,Genbank:NP_416711.1,EcoGene:EG12143,GeneID:945187;Name=NP_416711.1;gbkey=CDS;gene=napD;product=assembly protein for periplasmic nitrate reductase;protein_id=NP_416711.1;transl_table=11 NC_000913.3 RefSeq gene 2303003 2303497 . - . ID=gene2263;Dbxref=EcoGene:EG12068,GeneID:946813;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;gene_synonym=ECK2200,JW2196,yojG;locus_tag=b2208 NC_000913.3 RefSeq CDS 2303003 2303497 . - 0 ID=cds2191;Parent=gene2263;Dbxref=ASAP:ABE-0007293,UniProtKB/Swiss-Prot:P0AAL0,Genbank:NP_416712.1,EcoGene:EG12068,GeneID:946813;Name=NP_416712.1;Note=ferredoxin-type protein: electron transfer;gbkey=CDS;gene=napF;product=ferredoxin-type protein%2C role in electron transfer to periplasmic nitrate reductase NapA;protein_id=NP_416712.1;transl_table=11 NC_000913.3 RefSeq gene 2303905 2304393 . + . ID=gene2264;Dbxref=EcoGene:EG10255,GeneID:946700;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;gene_synonym=ECK2201,eti,JW2197;locus_tag=b2209 NC_000913.3 RefSeq CDS 2303905 2304393 . + 0 ID=cds2192;Parent=gene2264;Dbxref=ASAP:ABE-0007297,UniProtKB/Swiss-Prot:P23827,Genbank:NP_416713.1,EcoGene:EG10255,GeneID:946700;Name=NP_416713.1;gbkey=CDS;gene=eco;product=ecotin%2C a serine protease inhibitor;protein_id=NP_416713.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2304417 2305071 . + . ID=id273;Note=REP161 (repetitive extragenic palindromic) element%3B contains 12 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2305108 2306754 . - . ID=gene2265;Dbxref=EcoGene:EG12069,GeneID:946702;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;gene_synonym=ECK2202,JW2198,yojH;locus_tag=b2210 NC_000913.3 RefSeq CDS 2305108 2306754 . - 0 ID=cds2193;Parent=gene2265;Dbxref=ASAP:ABE-0007300,UniProtKB/Swiss-Prot:P33940,Genbank:NP_416714.1,EcoGene:EG12069,GeneID:946702;Name=NP_416714.1;gbkey=CDS;gene=mqo;product=malate dehydrogenase%2C FAD/NAD(P)-binding domain;protein_id=NP_416714.1;transl_table=11 NC_000913.3 RefSeq gene 2306972 2308615 . - . ID=gene2266;Dbxref=EcoGene:EG12070,GeneID:946705;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;gene_synonym=ECK2203,JW2199,yojJ;locus_tag=b2211 NC_000913.3 RefSeq CDS 2306972 2308615 . - 0 ID=cds2194;Parent=gene2266;Dbxref=ASAP:ABE-0007303,UniProtKB/Swiss-Prot:P33941,Genbank:NP_416715.1,EcoGene:EG12070,GeneID:946705;Name=NP_416715.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yojI;product=microcin J25 efflux ABC transporter permease/ATPase;protein_id=NP_416715.1;transl_table=11 NC_000913.3 RefSeq gene 2308691 2309341 . - . ID=gene2267;Dbxref=EcoGene:EG10037,GeneID:946708;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;gene_synonym=aidD,ECK2204,JW2200;locus_tag=b2212 NC_000913.3 RefSeq CDS 2308691 2309341 . - 0 ID=cds2195;Parent=gene2267;Dbxref=ASAP:ABE-0007308,UniProtKB/Swiss-Prot:P05050,Genbank:NP_416716.1,EcoGene:EG10037,GeneID:946708;Name=NP_416716.1;Note=DNA repair system specific for alkylated DNA;gbkey=CDS;gene=alkB;product=oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions;protein_id=NP_416716.1;transl_table=11 NC_000913.3 RefSeq gene 2309341 2310405 . - . ID=gene2268;Dbxref=EcoGene:EG10029,GeneID:946710;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;gene_synonym=ECK2205,JW2201;locus_tag=b2213 NC_000913.3 RefSeq CDS 2309341 2310405 . - 0 ID=cds2196;Parent=gene2268;Dbxref=ASAP:ABE-0007311,UniProtKB/Swiss-Prot:P06134,Genbank:NP_416717.1,EcoGene:EG10029,GeneID:946710;Name=NP_416717.1;Note=O6-methylguanine-DNA methyltransferase%3B transcription activator/repressor;gbkey=CDS;gene=ada;product=fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase;protein_id=NP_416717.1;transl_table=11 NC_000913.3 RefSeq gene 2310479 2311534 . - . ID=gene2269;Dbxref=EcoGene:EG12073,GeneID:946711;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;gene_synonym=ECK2206,JW5368,yojK,yojL;locus_tag=b2214 NC_000913.3 RefSeq CDS 2310479 2311534 . - 0 ID=cds2197;Parent=gene2269;Dbxref=ASAP:ABE-0007317,UniProtKB/Swiss-Prot:P0AB85,Genbank:NP_416718.1,EcoGene:EG12073,GeneID:946711;Name=NP_416718.1;gbkey=CDS;gene=apbE;product=putative thiamine-synthetic flavin transferase lipoprotein;protein_id=NP_416718.1;transl_table=11 NC_000913.3 RefSeq gene 2311646 2312749 . - . ID=gene2270;Dbxref=EcoGene:EG10670,GeneID:946716;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;gene_synonym=butR,ECK2207,JW2203,meoA,par;locus_tag=b2215 NC_000913.3 RefSeq CDS 2311646 2312749 . - 0 ID=cds2198;Parent=gene2270;Dbxref=ASAP:ABE-0007321,UniProtKB/Swiss-Prot:P06996,Genbank:NP_416719.1,EcoGene:EG10670,GeneID:946716;Name=NP_416719.1;Note=outer membrane protein 1b (Ib%3Bc);gbkey=CDS;gene=ompC;product=outer membrane porin protein C;protein_id=NP_416719.1;transl_table=11 NC_000913.3 RefSeq gene 2313084 2313176 . + . ID=gene2271;Dbxref=EcoGene:EG30063,GeneID:2847742;Name=micF;gbkey=Gene;gene=micF;gene_biotype=antisense_RNA;gene_synonym=ECK2208,IS113,JWR0043,stc;locus_tag=b4439 NC_000913.3 RefSeq ncRNA 2313084 2313176 . + . ID=rna71;Parent=gene2271;Dbxref=ASAP:ABE-0047259,EcoGene:EG30063,GeneID:2847742;Note=regulatory antisense RNA affecting ompF expression%3B member of soxRS regulon;gbkey=ncRNA;gene=micF;ncrna_class=antisense_RNA;product=sRNA antisense regulator affecting ompF expression%2C Hfq-dependent NC_000913.3 RefSeq exon 2313084 2313176 . + . ID=id274;Parent=rna71;Dbxref=ASAP:ABE-0047259,EcoGene:EG30063,GeneID:2847742;Note=regulatory antisense RNA affecting ompF expression%3B member of soxRS regulon;gbkey=ncRNA;gene=micF;ncrna_class=antisense_RNA;product=sRNA antisense regulator affecting ompF expression%2C Hfq-dependent NC_000913.3 RefSeq gene 2313488 2316160 . + . ID=gene2272;Dbxref=EcoGene:EG12385,GeneID:946717;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;gene_synonym=ECK2209,JW2204,yojN,yojP,yojQ;locus_tag=b2216 NC_000913.3 RefSeq CDS 2313488 2316160 . + 0 ID=cds2199;Parent=gene2272;Dbxref=ASAP:ABE-0007330,UniProtKB/Swiss-Prot:P39838,Genbank:NP_416720.1,EcoGene:EG12385,GeneID:946717;Name=NP_416720.1;Note=putative 2-component sensor protein;gbkey=CDS;gene=rcsD;product=phosphotransfer intermediate protein in two-component regulatory system with RcsBC;protein_id=NP_416720.1;transl_table=11 NC_000913.3 RefSeq gene 2316177 2316827 . + . ID=gene2273;Dbxref=EcoGene:EG10821,GeneID:947441;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;gene_synonym=ECK2210,JW2205,viaA;locus_tag=b2217 NC_000913.3 RefSeq CDS 2316177 2316827 . + 0 ID=cds2200;Parent=gene2273;Dbxref=ASAP:ABE-0007333,UniProtKB/Swiss-Prot:P69407,Genbank:NP_416721.1,EcoGene:EG10821,GeneID:947441;Name=NP_416721.1;Note=positive response regulator for colanic capsule biosynthesis%2C (sensor%2C RcsC);gbkey=CDS;gene=rcsB;product=response regulator in two-component regulatory system with RcsC and YojN;protein_id=NP_416721.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2316834 2317030 . + . ID=id275;Note=RIP162 (repetitive extragenic palindromic) element%3B contains 5 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2317027 2319876 . - . ID=gene2274;Dbxref=EcoGene:EG10822,GeneID:948993;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;gene_synonym=ECK2211,JW5917,JW5920;locus_tag=b2218 NC_000913.3 RefSeq CDS 2317027 2319876 . - 0 ID=cds2201;Parent=gene2274;Dbxref=ASAP:ABE-0007336,UniProtKB/Swiss-Prot:P14376,Genbank:NP_416722.2,EcoGene:EG10822,GeneID:948993;Name=NP_416722.2;Note=sensor for ctr capsule biosynthesis%2C probable histidine kinase acting on RcsB;gbkey=CDS;gene=rcsC;product=hybrid sensory kinase in two-component regulatory system with RcsB and YojN;protein_id=NP_416722.2;transl_table=11 NC_000913.3 RefSeq gene 2320043 2321869 . + . ID=gene2275;Dbxref=EcoGene:EG11667,GeneID:949011;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;gene_synonym=ECK2212,JW2213;locus_tag=b2219 NC_000913.3 RefSeq CDS 2320043 2321869 . + 0 ID=cds2202;Parent=gene2275;Dbxref=ASAP:ABE-0007341,UniProtKB/Swiss-Prot:Q06067,Genbank:NP_416723.1,EcoGene:EG11667,GeneID:949011;Name=NP_416723.1;Note=sensor protein AtoS for response regulator AtoC;gbkey=CDS;gene=atoS;product=sensory histidine kinase in two-component regulatory system with AtoC;protein_id=NP_416723.1;transl_table=11 NC_000913.3 RefSeq gene 2321866 2323251 . + . ID=gene2276;Dbxref=EcoGene:EG11668,GeneID:947444;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;gene_synonym=Az,ECK2213,JW2214;locus_tag=b2220 NC_000913.3 RefSeq CDS 2321866 2323251 . + 0 ID=cds2203;Parent=gene2276;Dbxref=ASAP:ABE-0007343,UniProtKB/Swiss-Prot:Q06065,Genbank:NP_416724.1,EcoGene:EG11668,GeneID:947444;Name=NP_416724.1;Note=response regulator of ato%2C ornithine decarboxylase antizyme (sensor ATOS);gbkey=CDS;gene=atoC;product=fused response regulator of ato operon%2C in two-component system with AtoS: response regulator/sigma54 interaction protein;protein_id=NP_416724.1;transl_table=11 NC_000913.3 RefSeq gene 2323447 2324109 . + . ID=gene2277;Dbxref=EcoGene:EG11669,GeneID:947525;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;gene_synonym=ECK2214,JW2215;locus_tag=b2221 NC_000913.3 RefSeq CDS 2323447 2324109 . + 0 ID=cds2204;Parent=gene2277;Dbxref=ASAP:ABE-0007347,UniProtKB/Swiss-Prot:P76458,Genbank:NP_416725.1,EcoGene:EG11669,GeneID:947525;Name=NP_416725.1;Note=acetyl-CoA:acetoacetyl-CoA transferase alpha subunit;gbkey=CDS;gene=atoD;product=acetyl-CoA:acetoacetyl-CoA transferase%2C alpha subunit;protein_id=NP_416725.1;transl_table=11 NC_000913.3 RefSeq gene 2324109 2324759 . + . ID=gene2278;Dbxref=EcoGene:EG11670,GeneID:946719;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;gene_synonym=ECK2215,JW2216;locus_tag=b2222 NC_000913.3 RefSeq CDS 2324109 2324759 . + 0 ID=cds2205;Parent=gene2278;Dbxref=ASAP:ABE-0007349,UniProtKB/Swiss-Prot:P76459,Genbank:NP_416726.1,EcoGene:EG11670,GeneID:946719;Name=NP_416726.1;Note=acetyl-CoA:acetoacetyl-CoA transferase beta subunit;gbkey=CDS;gene=atoA;product=acetyl-CoA:acetoacetyl-CoA transferase%2C beta subunit;protein_id=NP_416726.1;transl_table=11 NC_000913.3 RefSeq gene 2324756 2326078 . + . ID=gene2279;Dbxref=EcoGene:EG11671,GeneID:946721;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;gene_synonym=ECK2216,JW2217;locus_tag=b2223 NC_000913.3 RefSeq CDS 2324756 2326078 . + 0 ID=cds2206;Parent=gene2279;Dbxref=ASAP:ABE-0007353,UniProtKB/Swiss-Prot:P76460,Genbank:NP_416727.1,EcoGene:EG11671,GeneID:946721;Name=NP_416727.1;gbkey=CDS;gene=atoE;product=short chain fatty acid transporter;protein_id=NP_416727.1;transl_table=11 NC_000913.3 RefSeq gene 2326109 2327293 . + . ID=gene2280;Dbxref=EcoGene:EG11672,GeneID:946727;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;gene_synonym=ECK2217,JW2218;locus_tag=b2224 NC_000913.3 RefSeq CDS 2326109 2327293 . + 0 ID=cds2207;Parent=gene2280;Dbxref=ASAP:ABE-0007355,UniProtKB/Swiss-Prot:P76461,Genbank:NP_416728.1,EcoGene:EG11672,GeneID:946727;Name=NP_416728.1;gbkey=CDS;gene=atoB;product=acetyl-CoA acetyltransferase;protein_id=NP_416728.1;transl_table=11 NC_000913.3 RefSeq gene 2327367 2328143 . - . ID=gene2281;Dbxref=EcoGene:EG14078,GeneID:946728;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;gene_synonym=ECK2218,JW2219;locus_tag=b2225 NC_000913.3 RefSeq CDS 2327367 2328143 . - 0 ID=cds2208;Parent=gene2281;Dbxref=ASAP:ABE-0007357,UniProtKB/Swiss-Prot:P76462,Genbank:NP_416729.1,EcoGene:EG14078,GeneID:946728;Name=NP_416729.1;gbkey=CDS;gene=yfaP;product=DUF2135 family protein%2C putative host defense protein;protein_id=NP_416729.1;transl_table=11 NC_000913.3 RefSeq gene 2328148 2329797 . - . ID=gene2282;Dbxref=EcoGene:EG14079,GeneID:946730;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;gene_synonym=ECK2219,JW2220;locus_tag=b2226 NC_000913.3 RefSeq CDS 2328148 2329797 . - 0 ID=cds2209;Parent=gene2282;Dbxref=ASAP:ABE-0007359,UniProtKB/Swiss-Prot:P76463,Genbank:NP_416730.1,EcoGene:EG14079,GeneID:946730;Name=NP_416730.1;gbkey=CDS;gene=yfaQ;product=tandem DUF2300 domain protein%2C putative host defense protein;protein_id=NP_416730.1;transl_table=11 NC_000913.3 RefSeq gene 2329798 2334402 . - . ID=gene2283;Dbxref=EcoGene:EG14081,GeneID:1450231;Name=yfaS;gbkey=Gene;gene=yfaS;gene_biotype=pseudogene;gene_synonym=ECK2220,JW2221,JW2222,yfaR;locus_tag=b4500;pseudo=true NC_000913.3 RefSeq CDS 2329798 2334402 . - 0 ID=cds2210;Parent=gene2283;Dbxref=ASAP:ABE-0007362,ASAP:ABE-0007364,ASAP:ABE-0285101,UniProtKB/Swiss-Prot:P76464,EcoGene:EG14081,GeneID:1450231;Note=pseudogene%2C bacterial alpha2-macroglobulin YfaS variant family~putative membrane protein;gbkey=CDS;gene=yfaS;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2334336 2334959 . - . ID=gene2284;Dbxref=EcoGene:EG14082,GeneID:946622;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=protein_coding;gene_synonym=ECK2221,JW2223;locus_tag=b2229 NC_000913.3 RefSeq CDS 2334336 2334959 . - 0 ID=cds2211;Parent=gene2284;Dbxref=ASAP:ABE-0007366,UniProtKB/Swiss-Prot:P76466,Genbank:NP_416732.4,EcoGene:EG14082,GeneID:946622;Name=NP_416732.4;gbkey=CDS;gene=yfaT;product=DUF1175 family protein%2C putative host defense protein;protein_id=NP_416732.4;transl_table=11 NC_000913.3 RefSeq gene 2334956 2336644 . - . ID=gene2285;Dbxref=EcoGene:EG11142,GeneID:946618;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;gene_synonym=ECK2222,JW2224,pufY;locus_tag=b2230 NC_000913.3 RefSeq CDS 2334956 2336644 . - 0 ID=cds2212;Parent=gene2285;Dbxref=ASAP:ABE-0007368,UniProtKB/Swiss-Prot:P17994,Genbank:NP_416733.4,EcoGene:EG11142,GeneID:946618;Name=NP_416733.4;gbkey=CDS;gene=yfaA;product=DUF2138 family protein%2C putative host defense protein;protein_id=NP_416733.4;transl_table=11 NC_000913.3 RefSeq gene 2336793 2339420 . - . ID=gene2286;Dbxref=EcoGene:EG10423,GeneID:946614;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;gene_synonym=ECK2223,hisW,JW2225,nalA,nfxA,norA,parD;locus_tag=b2231 NC_000913.3 RefSeq CDS 2336793 2339420 . - 0 ID=cds2213;Parent=gene2286;Dbxref=ASAP:ABE-0007370,UniProtKB/Swiss-Prot:P0AES4,Genbank:NP_416734.1,EcoGene:EG10423,GeneID:946614;Name=NP_416734.1;Note=DNA gyrase%2C subunit A%2C type II topoisomerase;gbkey=CDS;gene=gyrA;product=DNA gyrase (type II topoisomerase)%2C subunit A;protein_id=NP_416734.1;transl_table=11 NC_000913.3 RefSeq gene 2339567 2340289 . + . ID=gene2287;Dbxref=EcoGene:EG11143,GeneID:946607;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;gene_synonym=ECK2224,JW2226,pufX,yfaB;locus_tag=b2232 NC_000913.3 RefSeq CDS 2339567 2340289 . + 0 ID=cds2214;Parent=gene2287;Dbxref=ASAP:ABE-0007374,UniProtKB/Swiss-Prot:P17993,Genbank:NP_416735.1,EcoGene:EG11143,GeneID:946607;Name=NP_416735.1;Note=3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase;gbkey=CDS;gene=ubiG;product=bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase;protein_id=NP_416735.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2340313 2340394 . + . ID=id276;Note=REP163 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2340417 2344169 . - . ID=gene2288;Dbxref=EcoGene:EG12850,GeneID:946595;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;gene_synonym=ECK2225,JW2227,yfaF,yfaJ,yfaK;locus_tag=b2233 NC_000913.3 RefSeq CDS 2340417 2344169 . - 0 ID=cds2215;Parent=gene2288;Dbxref=ASAP:ABE-0007377,UniProtKB/Swiss-Prot:P45508,Genbank:NP_416736.1,EcoGene:EG12850,GeneID:946595;Name=NP_416736.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yfaL;product=adhesin;protein_id=NP_416736.1;transl_table=11 NC_000913.3 RefSeq gene 2344865 2347150 . + . ID=gene2289;Dbxref=EcoGene:EG10660,GeneID:946612;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;gene_synonym=dnaF,ECK2226,JW2228;locus_tag=b2234 NC_000913.3 RefSeq CDS 2344865 2347150 . + 0 ID=cds2216;Parent=gene2289;Dbxref=ASAP:ABE-0007383,UniProtKB/Swiss-Prot:P00452,Genbank:NP_416737.1,EcoGene:EG10660,GeneID:946612;Name=NP_416737.1;Note=ribonucleoside diphosphate reductase 1%2C alpha subunit%2C B1;gbkey=CDS;gene=nrdA;product=ribonucleoside-diphosphate reductase 1%2C alpha subunit;protein_id=NP_416737.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2347160 2347362 . + . ID=id277;Note=REP164 (repetitive extragenic palindromic) element%3B contains 5 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2347384 2348514 . + . ID=gene2290;Dbxref=EcoGene:EG10661,GeneID:946732;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;gene_synonym=ECK2227,ftsB,JW2229;locus_tag=b2235 NC_000913.3 RefSeq CDS 2347384 2348514 . + 0 ID=cds2217;Parent=gene2290;Dbxref=ASAP:ABE-0007386,UniProtKB/Swiss-Prot:P69924,Genbank:NP_416738.1,EcoGene:EG10661,GeneID:946732;Name=NP_416738.1;Note=ribonucleoside-diphosphate reductase 1%2C beta subunit%2C B2;gbkey=CDS;gene=nrdB;product=ribonucleoside-diphosphate reductase 1%2C beta subunit%2C ferritin-like protein;protein_id=NP_416738.1;transl_table=11 NC_000913.3 RefSeq gene 2348514 2348768 . + . ID=gene2291;Dbxref=EcoGene:EG12360,GeneID:946729;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;gene_synonym=ECK2228,JW2230;locus_tag=b2236 NC_000913.3 RefSeq CDS 2348514 2348768 . + 0 ID=cds2218;Parent=gene2291;Dbxref=ASAP:ABE-0007390,UniProtKB/Swiss-Prot:P0ABW3,Genbank:NP_416739.1,EcoGene:EG12360,GeneID:946729;Name=NP_416739.1;gbkey=CDS;gene=yfaE;product=ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance;protein_id=NP_416739.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2348781 2348816 . + . ID=id278;Note=REP165 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2348822 2349472 . - . ID=gene2292;Dbxref=EcoGene:EG11422,GeneID:946731;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;gene_synonym=ECK2229,JW2231,yfaG;locus_tag=b2237 NC_000913.3 RefSeq CDS 2348822 2349472 . - 0 ID=cds2219;Parent=gene2292;Dbxref=ASAP:ABE-0007393,UniProtKB/Swiss-Prot:P27294,Genbank:NP_416740.1,EcoGene:EG11422,GeneID:946731;Name=NP_416740.1;Note=pH-inducible protein involved in stress response;gbkey=CDS;gene=inaA;product=acid-inducible Kdo/WaaP family putative kinase;protein_id=NP_416740.1;transl_table=11 NC_000913.3 RefSeq gene 2349651 2349893 . + . ID=gene2293;Dbxref=EcoGene:EG12881,GeneID:946718;Name=yfaH;gbkey=Gene;gene=yfaH;gene_biotype=pseudogene;gene_synonym=ECK2230,JW2232;locus_tag=b2238;pseudo=true NC_000913.3 RefSeq CDS 2349651 2349893 . + 0 ID=cds2220;Parent=gene2293;Dbxref=ASAP:ABE-0007397,UniProtKB/Swiss-Prot:P45505,EcoGene:EG12881,GeneID:946718;Note=pseudogene;gbkey=CDS;gene=yfaH;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2349935 2351011 . - . ID=gene2294;Dbxref=EcoGene:EG10399,GeneID:946725;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;gene_synonym=ECK2231,JW2233;locus_tag=b2239 NC_000913.3 RefSeq CDS 2349935 2351011 . - 0 ID=cds2221;Parent=gene2294;Dbxref=ASAP:ABE-0007399,UniProtKB/Swiss-Prot:P09394,Genbank:NP_416742.1,EcoGene:EG10399,GeneID:946725;Name=NP_416742.1;Note=glycerophosphodiester phosphodiesterase%2C periplasmic;gbkey=CDS;gene=glpQ;product=periplasmic glycerophosphodiester phosphodiesterase;protein_id=NP_416742.1;transl_table=11 NC_000913.3 RefSeq gene 2351016 2352374 . - . ID=gene2295;Dbxref=EcoGene:EG10401,GeneID:946704;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;gene_synonym=ECK2232,JW2234;locus_tag=b2240 NC_000913.3 RefSeq CDS 2351016 2352374 . - 0 ID=cds2222;Parent=gene2295;Dbxref=ASAP:ABE-0007401,UniProtKB/Swiss-Prot:P08194,Genbank:NP_416743.1,EcoGene:EG10401,GeneID:946704;Name=NP_416743.1;Note=sn-glycerol-3-phosphate permease;gbkey=CDS;gene=glpT;product=sn-glycerol-3-phosphate transporter;protein_id=NP_416743.1;transl_table=11 NC_000913.3 RefSeq gene 2352647 2354275 . + . ID=gene2296;Dbxref=EcoGene:EG10391,GeneID:946713;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;gene_synonym=ECK2233,JW2235;locus_tag=b2241 NC_000913.3 RefSeq CDS 2352647 2354275 . + 0 ID=cds2223;Parent=gene2296;Dbxref=ASAP:ABE-0007422,UniProtKB/Swiss-Prot:P0A9C0,Genbank:NP_416744.1,EcoGene:EG10391,GeneID:946713;Name=NP_416744.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%2C large subunit;gbkey=CDS;gene=glpA;product=anaerobic sn-glycerol-3-phosphate dehydrogenase%2C large FAD/NAD(P)-binding subunit;protein_id=NP_416744.1;transl_table=11 NC_000913.3 RefSeq gene 2354265 2355524 . + . ID=gene2297;Dbxref=EcoGene:EG10392,GeneID:946733;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;gene_synonym=ECK2234,glpC,JW2236,psi-51;locus_tag=b2242 NC_000913.3 RefSeq CDS 2354265 2355524 . + 0 ID=cds2224;Parent=gene2297;Dbxref=ASAP:ABE-0007424,UniProtKB/Swiss-Prot:P13033,Genbank:NP_416745.1,EcoGene:EG10392,GeneID:946733;Name=NP_416745.1;gbkey=CDS;gene=glpB;product=anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit;protein_id=NP_416745.1;transl_table=11 NC_000913.3 RefSeq gene 2355521 2356711 . + . ID=gene2298;Dbxref=EcoGene:EG10393,GeneID:946735;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;gene_synonym=ECK2235,glpB,JW2237;locus_tag=b2243 NC_000913.3 RefSeq CDS 2355521 2356711 . + 0 ID=cds2225;Parent=gene2298;Dbxref=ASAP:ABE-0007426,UniProtKB/Swiss-Prot:P0A996,Genbank:NP_416746.1,EcoGene:EG10393,GeneID:946735;Name=NP_416746.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%2C K-small subunit;gbkey=CDS;gene=glpC;product=anaerobic sn-glycerol-3-phosphate dehydrogenase%2C C subunit%2C 4Fe-4S iron-sulfur cluster;protein_id=NP_416746.1;transl_table=11 NC_000913.3 RefSeq gene 2356904 2357803 . + . ID=gene2299;Dbxref=EcoGene:EG12323,GeneID:946737;Name=yfaD;gbkey=Gene;gene=yfaD;gene_biotype=protein_coding;gene_synonym=ECK2236,JW2238;locus_tag=b2244 NC_000913.3 RefSeq CDS 2356904 2357803 . + 0 ID=cds2226;Parent=gene2299;Dbxref=ASAP:ABE-0007429,UniProtKB/Swiss-Prot:P37014,Genbank:NP_416747.1,EcoGene:EG12323,GeneID:946737;Name=NP_416747.1;gbkey=CDS;gene=yfaD;product=transposase_31 family protein;protein_id=NP_416747.1;transl_table=11 NC_000913.3 RefSeq gene 2357804 2358001 . + . ID=gene2300;Dbxref=EcoGene:EG14427,GeneID:1450280;Name=ypaA;gbkey=Gene;gene=ypaA;gene_biotype=pseudogene;gene_synonym=ECK2237,JW5964;locus_tag=b4543;pseudo=true NC_000913.3 RefSeq CDS 2357804 2358001 . + 0 ID=cds2227;Parent=gene2300;Dbxref=ASAP:ABE-0285064,EcoGene:EG14427,GeneID:1450280;Note=pseudogene%2C C-terminal fragment%2C Transposase_31 family;gbkey=CDS;gene=ypaA;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2358042 2358845 . - . ID=gene2301;Dbxref=EcoGene:EG14083,GeneID:948054;Name=rhmA;gbkey=Gene;gene=rhmA;gene_biotype=protein_coding;gene_synonym=ECK2238,JW2239,yfaU;locus_tag=b2245 NC_000913.3 RefSeq CDS 2358042 2358845 . - 0 ID=cds2228;Parent=gene2301;Dbxref=ASAP:ABE-0007431,UniProtKB/Swiss-Prot:P76469,Genbank:NP_416748.1,EcoGene:EG14083,GeneID:948054;Name=NP_416748.1;gbkey=CDS;gene=rhmA;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=NP_416748.1;transl_table=11 NC_000913.3 RefSeq gene 2358863 2360152 . - . ID=gene2302;Dbxref=EcoGene:EG14084,GeneID:945796;Name=rhmT;gbkey=Gene;gene=rhmT;gene_biotype=protein_coding;gene_synonym=ECK2239,JW2240,yfaV;locus_tag=b2246 NC_000913.3 RefSeq CDS 2358863 2360152 . - 0 ID=cds2229;Parent=gene2302;Dbxref=ASAP:ABE-0007433,UniProtKB/Swiss-Prot:P76470,Genbank:NP_416749.4,EcoGene:EG14084,GeneID:945796;Name=NP_416749.4;Note=putative transport protein;gbkey=CDS;gene=rhmT;product=putative L-rhamnonate transporter;protein_id=NP_416749.4;transl_table=11 NC_000913.3 RefSeq gene 2360209 2361414 . - . ID=gene2303;Dbxref=EcoGene:EG14085,GeneID:945881;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;gene_synonym=ECK2240,JW2241,yfaW;locus_tag=b2247 NC_000913.3 RefSeq CDS 2360209 2361414 . - 0 ID=cds2230;Parent=gene2303;Dbxref=ASAP:ABE-0007436,UniProtKB/Swiss-Prot:P77215,Genbank:NP_416750.2,EcoGene:EG14085,GeneID:945881;Name=NP_416750.2;Note=putative racemase;gbkey=CDS;gene=rhmD;product=L-rhamnonate dehydratase;protein_id=NP_416750.2;transl_table=11 NC_000913.3 RefSeq gene 2361429 2362211 . - . ID=gene2304;Dbxref=EcoGene:EG14086,GeneID:944752;Name=rhmR;gbkey=Gene;gene=rhmR;gene_biotype=protein_coding;gene_synonym=ECK2241,JW2242,yfaX;locus_tag=b2248 NC_000913.3 RefSeq CDS 2361429 2362211 . - 0 ID=cds2231;Parent=gene2304;Dbxref=ASAP:ABE-0007438,UniProtKB/Swiss-Prot:P77732,Genbank:NP_416751.1,EcoGene:EG14086,GeneID:944752;Name=NP_416751.1;Note=putative regulator;gbkey=CDS;gene=rhmR;product=putative DNA-binding transcriptional regulator for the rhm operon;protein_id=NP_416751.1;transl_table=11 NC_000913.3 RefSeq gene 2362431 2363633 . - . ID=gene2305;Dbxref=EcoGene:EG14087,GeneID:945478;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;gene_synonym=cinA,ECK2242,JW2243;locus_tag=b2249 NC_000913.3 RefSeq CDS 2362431 2363633 . - 0 ID=cds2232;Parent=gene2305;Dbxref=ASAP:ABE-0007441,UniProtKB/Swiss-Prot:P77808,Genbank:NP_416752.1,EcoGene:EG14087,GeneID:945478;Name=NP_416752.1;gbkey=CDS;gene=yfaY;product=inactive PncC family protein;protein_id=NP_416752.1;transl_table=11 NC_000913.3 RefSeq gene 2363733 2364275 . - . ID=gene2306;Dbxref=EcoGene:EG14088,GeneID:946739;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;gene_synonym=ECK2243,JW5371;locus_tag=b2250 NC_000913.3 RefSeq CDS 2363733 2364275 . - 0 ID=cds2233;Parent=gene2306;Dbxref=ASAP:ABE-0007445,UniProtKB/Swiss-Prot:P76471,Genbank:NP_416753.4,EcoGene:EG14088,GeneID:946739;Name=NP_416753.4;gbkey=CDS;gene=yfaZ;product=outer membrane protein%2C putative porin;protein_id=NP_416753.4;transl_table=11 NC_000913.3 RefSeq gene 2364554 2364979 . + . ID=gene2307;Dbxref=EcoGene:EG13275,GeneID:946740;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;gene_synonym=ECK2244,JW2245,yfaO;locus_tag=b2251 NC_000913.3 RefSeq CDS 2364554 2364979 . + 0 ID=cds2234;Parent=gene2307;Dbxref=ASAP:ABE-0007449,UniProtKB/Swiss-Prot:P52006,Genbank:NP_416754.1,EcoGene:EG13275,GeneID:946740;Name=NP_416754.1;gbkey=CDS;gene=nudI;product=nucleoside triphosphatase;protein_id=NP_416754.1;transl_table=11 NC_000913.3 RefSeq gene 2365018 2365620 . - . ID=gene2308;Dbxref=EcoGene:EG13155,GeneID:944945;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;gene_synonym=ECK2245,JW2246,pagH,pmrG;locus_tag=b2252 NC_000913.3 RefSeq CDS 2365018 2365620 . - 0 ID=cds2235;Parent=gene2308;Dbxref=ASAP:ABE-0007451,UniProtKB/Swiss-Prot:P45565,Genbank:NP_416755.1,EcoGene:EG13155,GeneID:944945;Name=NP_416755.1;Note=protein induced by aluminum;gbkey=CDS;gene=ais;product=putative LPS core heptose(II)-phosphate phosphatase;protein_id=NP_416755.1;transl_table=11 NC_000913.3 RefSeq gene 2365928 2367067 . + . ID=gene2309;Dbxref=EcoGene:EG14089,GeneID:947375;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;gene_synonym=ECK2246,JW5372,pgbP1,pmrH,yfbE;locus_tag=b2253 NC_000913.3 RefSeq CDS 2365928 2367067 . + 0 ID=cds2236;Parent=gene2309;Dbxref=ASAP:ABE-0007456,UniProtKB/Swiss-Prot:P77690,Genbank:NP_416756.5,EcoGene:EG14089,GeneID:947375;Name=NP_416756.5;Note=putative enzyme;gbkey=CDS;gene=arnB;product=uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase%2C PLP-dependent;protein_id=NP_416756.5;transl_table=11 NC_000913.3 RefSeq gene 2367071 2368039 . + . ID=gene2310;Dbxref=EcoGene:EG14090,GeneID:945275;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;gene_synonym=ECK2247,JW2248,ORF2,pmrF,yfbF;locus_tag=b2254 NC_000913.3 RefSeq CDS 2367071 2368039 . + 0 ID=cds2237;Parent=gene2310;Dbxref=ASAP:ABE-0007458,UniProtKB/Swiss-Prot:P77757,Genbank:NP_416757.1,EcoGene:EG14090,GeneID:945275;Name=NP_416757.1;Note=putative sugar transferase;gbkey=CDS;gene=arnC;product=undecaprenyl phosphate-L-Ara4FN transferase;protein_id=NP_416757.1;transl_table=11 NC_000913.3 RefSeq gene 2368039 2370021 . + . ID=gene2311;Dbxref=EcoGene:EG14091,GeneID:947683;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;gene_synonym=ECK2248,JW2249,pbgP3,pmrI,SAF,yfbG;locus_tag=b2255 NC_000913.3 RefSeq CDS 2368039 2370021 . + 0 ID=cds2238;Parent=gene2311;Dbxref=ASAP:ABE-0007460,UniProtKB/Swiss-Prot:P77398,Genbank:NP_416758.1,EcoGene:EG14091,GeneID:947683;Name=NP_416758.1;Note=putative transformylase;gbkey=CDS;gene=arnA;product=fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase;protein_id=NP_416758.1;transl_table=11 NC_000913.3 RefSeq gene 2370018 2370908 . + . ID=gene2312;Dbxref=EcoGene:EG14092,GeneID:945334;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;gene_synonym=ECK2249,JW2250,pbgP4,pmrJ,yfbH;locus_tag=b2256 NC_000913.3 RefSeq CDS 2370018 2370908 . + 0 ID=cds2239;Parent=gene2312;Dbxref=ASAP:ABE-0007462,UniProtKB/Swiss-Prot:P76472,Genbank:NP_416759.1,EcoGene:EG14092,GeneID:945334;Name=NP_416759.1;gbkey=CDS;gene=arnD;product=undecaprenyl phosphate-alpha-L-ara4FN deformylase;protein_id=NP_416759.1;transl_table=11 NC_000913.3 RefSeq gene 2370908 2372560 . + . ID=gene2313;Dbxref=EcoGene:EG14093,GeneID:947297;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;gene_synonym=ECK2250,JW2251,pbgE1,pmrK,pqaB,yfbI;locus_tag=b2257 NC_000913.3 RefSeq CDS 2370908 2372560 . + 0 ID=cds2240;Parent=gene2313;Dbxref=ASAP:ABE-0007464,UniProtKB/Swiss-Prot:P76473,Genbank:NP_416760.1,EcoGene:EG14093,GeneID:947297;Name=NP_416760.1;Note=4-amino-4-deoxy-L-arabinose transferase (lipid A modification);gbkey=CDS;gene=arnT;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=NP_416760.1;transl_table=11 NC_000913.3 RefSeq gene 2372557 2372892 . + . ID=gene2314;Dbxref=EcoGene:EG14344,GeneID:1450282;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;gene_synonym=ECK2251,JW2252,pbgE2,pmrL,yfbW;locus_tag=b4544 NC_000913.3 RefSeq CDS 2372557 2372892 . + 0 ID=cds2241;Parent=gene2314;Dbxref=ASAP:ABE-0285065,UniProtKB/Swiss-Prot:Q47377,Genbank:YP_588462.1,EcoGene:EG14344,GeneID:1450282;Name=YP_588462.1;gbkey=CDS;gene=arnE;product=undecaprenyl phosphate-alpha-L-ara4N exporter%3B flippase ArnEF subunit;protein_id=YP_588462.1;transl_table=11 NC_000913.3 RefSeq gene 2372892 2373278 . + . ID=gene2315;Dbxref=EcoGene:EG14094,GeneID:945344;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;gene_synonym=ECK2252,JW5373,pbgE3,pmrM,yfbJ;locus_tag=b2258 NC_000913.3 RefSeq CDS 2372892 2373278 . + 0 ID=cds2242;Parent=gene2315;Dbxref=ASAP:ABE-0007466,UniProtKB/Swiss-Prot:P76474,Genbank:NP_416761.4,EcoGene:EG14094,GeneID:945344;Name=NP_416761.4;Note=putative transport/receptor protein;gbkey=CDS;gene=arnF;product=undecaprenyl phosphate-alpha-L-ara4N exporter%3B flippase ArnEF subunit;protein_id=NP_416761.4;transl_table=11 NC_000913.3 RefSeq gene 2373272 2373538 . - . ID=gene2316;Dbxref=EcoGene:EG12671,GeneID:945130;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;gene_synonym=ECK2253,JW2254;locus_tag=b2259 NC_000913.3 RefSeq CDS 2373272 2373538 . - 0 ID=cds2243;Parent=gene2316;Dbxref=ASAP:ABE-0007468,UniProtKB/Swiss-Prot:P37590,Genbank:NP_416762.2,EcoGene:EG12671,GeneID:945130;Name=NP_416762.2;Note=an active Salmonella PmrD ortholog blocks dephosphorylation of PmrA(BasR) by PmrB(BasS);gbkey=CDS;gene=pmrD;product=inactive two-component system connector protein;protein_id=NP_416762.2;transl_table=11 NC_000913.3 RefSeq gene 2373648 2375003 . - . ID=gene2317;Dbxref=EcoGene:EG12437,GeneID:946741;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;gene_synonym=ECK2254,JW2255;locus_tag=b2260 NC_000913.3 RefSeq CDS 2373648 2375003 . - 0 ID=cds2244;Parent=gene2317;Dbxref=ASAP:ABE-0007471,UniProtKB/Swiss-Prot:P37353,Genbank:NP_416763.1,EcoGene:EG12437,GeneID:946741;Name=NP_416763.1;gbkey=CDS;gene=menE;product=O-succinylbenzoate-CoA ligase;protein_id=NP_416763.1;transl_table=11 NC_000913.3 RefSeq gene 2375000 2375962 . - . ID=gene2318;Dbxref=EcoGene:EG11532,GeneID:946734;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;gene_synonym=ECK2255,JW2256;locus_tag=b2261 NC_000913.3 RefSeq CDS 2375000 2375962 . - 0 ID=cds2245;Parent=gene2318;Dbxref=ASAP:ABE-0007473,UniProtKB/Swiss-Prot:P29208,Genbank:NP_416764.1,EcoGene:EG11532,GeneID:946734;Name=NP_416764.1;Note=o-succinylbenzoyl-CoA synthase%3B conversion of chorismate to 2-o-succinylbenzoyl-CoA;gbkey=CDS;gene=menC;product=O-succinylbenzoyl-CoA synthase;protein_id=NP_416764.1;transl_table=11 NC_000913.3 RefSeq gene 2375962 2376819 . - . ID=gene2319;Dbxref=EcoGene:EG11368,GeneID:946747;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;gene_synonym=ECK2256,JW2257;locus_tag=b2262 NC_000913.3 RefSeq CDS 2375962 2376819 . - 0 ID=cds2246;Parent=gene2319;Dbxref=ASAP:ABE-0007476,UniProtKB/Swiss-Prot:P0ABU0,Genbank:NP_416765.1,EcoGene:EG11368,GeneID:946747;Name=NP_416765.1;Note=dihydroxynaphtoic acid synthetase;gbkey=CDS;gene=menB;product=dihydroxynaphthoic acid synthetase;protein_id=NP_416765.1;transl_table=11 NC_000913.3 RefSeq gene 2376834 2377592 . - . ID=gene2320;Dbxref=EcoGene:EG12438,GeneID:946736;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;gene_synonym=ECK2257,JW2258,yfbB;locus_tag=b2263 NC_000913.3 RefSeq CDS 2376834 2377592 . - 0 ID=cds2247;Parent=gene2320;Dbxref=ASAP:ABE-0007478,UniProtKB/Swiss-Prot:P37355,Genbank:NP_416766.1,EcoGene:EG12438,GeneID:946736;Name=NP_416766.1;Note=putative enzyme;gbkey=CDS;gene=menH;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=NP_416766.1;transl_table=11 NC_000913.3 RefSeq gene 2377589 2379259 . - . ID=gene2321;Dbxref=EcoGene:EG10579,GeneID:946720;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;gene_synonym=ECK2258,JW5374;locus_tag=b2264 NC_000913.3 RefSeq CDS 2377589 2379259 . - 0 ID=cds2248;Parent=gene2321;Dbxref=ASAP:ABE-0007482,UniProtKB/Swiss-Prot:P17109,Genbank:NP_416767.1,EcoGene:EG10579,GeneID:946720;Name=NP_416767.1;Note=2-oxoglutarate decarboxylase%3B SHCHC synthase;gbkey=CDS;gene=menD;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase%3B SEPHCHC synthase;protein_id=NP_416767.1;transl_table=11 NC_000913.3 RefSeq gene 2379348 2380643 . - . ID=gene2322;Dbxref=EcoGene:EG12362,GeneID:946712;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;gene_synonym=ECK2259,JW2260,yfbA;locus_tag=b2265 NC_000913.3 RefSeq CDS 2379348 2380643 . - 0 ID=cds2249;Parent=gene2322;Dbxref=ASAP:ABE-0007485,UniProtKB/Swiss-Prot:P38051,Genbank:NP_416768.4,EcoGene:EG12362,GeneID:946712;Name=NP_416768.4;Note=isochorismate hydroxymutase 2%2C menaquinone biosynthesis;gbkey=CDS;gene=menF;product=isochorismate synthase 2;protein_id=NP_416768.4;transl_table=11 NC_000913.3 RefSeq gene 2380722 2381027 . - . ID=gene2323;Dbxref=EcoGene:EG13185,GeneID:946751;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;gene_synonym=ECK2260,JW2261,yfbD;locus_tag=b2266 NC_000913.3 RefSeq CDS 2380722 2381027 . - 0 ID=cds2250;Parent=gene2323;Dbxref=ASAP:ABE-0007487,UniProtKB/Swiss-Prot:P0AEH5,Genbank:NP_416769.1,EcoGene:EG13185,GeneID:946751;Name=NP_416769.1;gbkey=CDS;gene=elaB;product=putative membrane-anchored DUF883 family ribosome-binding protein;protein_id=NP_416769.1;transl_table=11 NC_000913.3 RefSeq gene 2381082 2381543 . - . ID=gene2324;Dbxref=EcoGene:EG13184,GeneID:946750;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;gene_synonym=ECK2261,JW2262,yfbC;locus_tag=b2267 NC_000913.3 RefSeq CDS 2381082 2381543 . - 0 ID=cds2251;Parent=gene2324;Dbxref=ASAP:ABE-0007489,UniProtKB/Swiss-Prot:P0AEH3,Genbank:NP_416770.1,EcoGene:EG13184,GeneID:946750;Name=NP_416770.1;gbkey=CDS;gene=elaA;product=GNAT family putative N-acetyltransferase;protein_id=NP_416770.1;transl_table=11 NC_000913.3 RefSeq gene 2381608 2382525 . + . ID=gene2325;Dbxref=EcoGene:EG14260,GeneID:946760;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;gene_synonym=ECK2262,ecoZ,elaC,JW2263,rnz,zipD;locus_tag=b2268 NC_000913.3 RefSeq CDS 2381608 2382525 . + 0 ID=cds2252;Parent=gene2325;Dbxref=ASAP:ABE-0007496,UniProtKB/Swiss-Prot:P0A8V0,Genbank:NP_416771.4,EcoGene:EG14260,GeneID:946760;Name=NP_416771.4;gbkey=CDS;gene=rbn;product=RNase BN%2C tRNA processing enzyme;protein_id=NP_416771.4;transl_table=11 NC_000913.3 RefSeq gene 2382713 2383924 . + . ID=gene2326;Dbxref=EcoGene:EG14261,GeneID:946742;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=protein_coding;gene_synonym=ECK2263,JW5840;locus_tag=b2269 NC_000913.3 RefSeq CDS 2382713 2383924 . + 0 ID=cds2253;Parent=gene2326;Dbxref=ASAP:ABE-0007499,UniProtKB/Swiss-Prot:Q47013,Genbank:NP_416772.1,EcoGene:EG14261,GeneID:946742;Name=NP_416772.1;Note=putative sulfatase / phosphatase;gbkey=CDS;gene=elaD;product=protease%2C capable of cleaving an AMC-ubiquitin model substrate;protein_id=NP_416772.1;transl_table=11 NC_000913.3 RefSeq gene 2383995 2385722 . - . ID=gene2327;Dbxref=EcoGene:EG14095,GeneID:946743;Name=yfbK;gbkey=Gene;gene=yfbK;gene_biotype=protein_coding;gene_synonym=ECK2264,JW2265;locus_tag=b2270 NC_000913.3 RefSeq CDS 2383995 2385722 . - 0 ID=cds2254;Parent=gene2327;Dbxref=ASAP:ABE-0007501,UniProtKB/Swiss-Prot:P76481,Genbank:NP_416773.1,EcoGene:EG14095,GeneID:946743;Name=NP_416773.1;gbkey=CDS;gene=yfbK;product=Von Willebrand factor domain putative lipoprotein;protein_id=NP_416773.1;transl_table=11 NC_000913.3 RefSeq gene 2385860 2386831 . + . ID=gene2328;Dbxref=EcoGene:EG14096,GeneID:945832;Name=yfbL;gbkey=Gene;gene=yfbL;gene_biotype=protein_coding;gene_synonym=ECK2265,JW2266;locus_tag=b2271 NC_000913.3 RefSeq CDS 2385860 2386831 . + 0 ID=cds2255;Parent=gene2328;Dbxref=ASAP:ABE-0007506,UniProtKB/Swiss-Prot:P76482,Genbank:NP_416774.2,EcoGene:EG14096,GeneID:945832;Name=NP_416774.2;Note=putative aminopeptidase;gbkey=CDS;gene=yfbL;product=putative M28A family peptidase;protein_id=NP_416774.2;transl_table=11 NC_000913.3 RefSeq gene 2386934 2387437 . + . ID=gene2329;Dbxref=EcoGene:EG14097,GeneID:946745;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;gene_synonym=ECK2266,JW2267;locus_tag=b2272 NC_000913.3 RefSeq CDS 2386934 2387437 . + 0 ID=cds2256;Parent=gene2329;Dbxref=ASAP:ABE-0007509,UniProtKB/Swiss-Prot:P76483,Genbank:NP_416775.1,EcoGene:EG14097,GeneID:946745;Name=NP_416775.1;gbkey=CDS;gene=yfbM;product=DUF1877 family protein;protein_id=NP_416775.1;transl_table=11 NC_000913.3 RefSeq gene 2387710 2388426 . - . ID=gene2330;Dbxref=EcoGene:EG14098,GeneID:946748;Name=yfbN;gbkey=Gene;gene=yfbN;gene_biotype=protein_coding;gene_synonym=ECK2267,JW2268;locus_tag=b2273 NC_000913.3 RefSeq CDS 2387710 2388426 . - 0 ID=cds2257;Parent=gene2330;Dbxref=ASAP:ABE-0007511,UniProtKB/Swiss-Prot:P76484,Genbank:NP_416776.1,EcoGene:EG14098,GeneID:946748;Name=NP_416776.1;gbkey=CDS;gene=yfbN;product=uncharacterized protein;protein_id=NP_416776.1;transl_table=11 NC_000913.3 RefSeq gene 2388635 2389057 . + . ID=gene2331;Dbxref=EcoGene:EG14099,GeneID:946752;Name=yfbO;gbkey=Gene;gene=yfbO;gene_biotype=protein_coding;gene_synonym=ECK2268,JW2269;locus_tag=b2274 NC_000913.3 RefSeq CDS 2388635 2389057 . + 0 ID=cds2258;Parent=gene2331;Dbxref=ASAP:ABE-0007518,UniProtKB/Swiss-Prot:P76485,Genbank:NP_416777.2,EcoGene:EG14099,GeneID:946752;Name=NP_416777.2;gbkey=CDS;gene=yfbO;product=uncharacterized protein;protein_id=NP_416777.2;transl_table=11 NC_000913.3 RefSeq gene 2389116 2389964 . + . ID=gene2332;Dbxref=EcoGene:EG14100,GeneID:946754;Name=yfbP;gbkey=Gene;gene=yfbP;gene_biotype=protein_coding;gene_synonym=ECK2269,JW2270;locus_tag=b2275 NC_000913.3 RefSeq CDS 2389116 2389964 . + 0 ID=cds2259;Parent=gene2332;Dbxref=ASAP:ABE-0007524,UniProtKB/Swiss-Prot:P76486,Genbank:NP_416778.2,EcoGene:EG14100,GeneID:946754;Name=NP_416778.2;gbkey=CDS;gene=yfbP;product=TPR-like repeats-containing protein;protein_id=NP_416778.2;transl_table=11 NC_000913.3 RefSeq gene 2390048 2391505 . - . ID=gene2333;Dbxref=EcoGene:EG12093,GeneID:945136;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;gene_synonym=ECK2270,JW2271;locus_tag=b2276 NC_000913.3 RefSeq CDS 2390048 2391505 . - 0 ID=cds2260;Parent=gene2333;Dbxref=ASAP:ABE-0007526,UniProtKB/Swiss-Prot:P0AFF0,Genbank:NP_416779.2,EcoGene:EG12093,GeneID:945136;Name=NP_416779.2;Note=NADH dehydrogenase I chain N;gbkey=CDS;gene=nuoN;product=NADH:ubiquinone oxidoreductase%2C membrane subunit N;protein_id=NP_416779.2;transl_table=11 NC_000913.3 RefSeq gene 2391512 2393041 . - . ID=gene2334;Dbxref=EcoGene:EG11773,GeneID:947731;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;gene_synonym=ECK2271,JW2272,nuoA;locus_tag=b2277 NC_000913.3 RefSeq CDS 2391512 2393041 . - 0 ID=cds2261;Parent=gene2334;Dbxref=ASAP:ABE-0007529,UniProtKB/Swiss-Prot:P0AFE8,Genbank:NP_416780.1,EcoGene:EG11773,GeneID:947731;Name=NP_416780.1;Note=NADH dehydrogenase I chain M;gbkey=CDS;gene=nuoM;product=NADH:ubiquinone oxidoreductase%2C membrane subunit M;protein_id=NP_416780.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2393131 2393166 . + . ID=id279;Note=REP166 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2393205 2395046 . - . ID=gene2335;Dbxref=EcoGene:EG12092,GeneID:945540;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;gene_synonym=ECK2272,JW2273;locus_tag=b2278 NC_000913.3 RefSeq CDS 2393205 2395046 . - 0 ID=cds2262;Parent=gene2335;Dbxref=ASAP:ABE-0007532,UniProtKB/Swiss-Prot:P33607,Genbank:NP_416781.1,EcoGene:EG12092,GeneID:945540;Name=NP_416781.1;Note=NADH dehydrogenase I chain L;gbkey=CDS;gene=nuoL;product=NADH:ubiquinone oxidoreductase%2C membrane subunit L;protein_id=NP_416781.1;transl_table=11 NC_000913.3 RefSeq gene 2395043 2395345 . - . ID=gene2336;Dbxref=EcoGene:EG12091,GeneID:947580;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;gene_synonym=ECK2273,JW2274;locus_tag=b2279 NC_000913.3 RefSeq CDS 2395043 2395345 . - 0 ID=cds2263;Parent=gene2336;Dbxref=ASAP:ABE-0007534,UniProtKB/Swiss-Prot:P0AFE4,Genbank:NP_416782.1,EcoGene:EG12091,GeneID:947580;Name=NP_416782.1;Note=NADH dehydrogenase I chain K;gbkey=CDS;gene=nuoK;product=NADH:ubiquinone oxidoreductase%2C membrane subunit K;protein_id=NP_416782.1;transl_table=11 NC_000913.3 RefSeq gene 2395342 2395896 . - . ID=gene2337;Dbxref=EcoGene:EG12090,GeneID:946756;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;gene_synonym=ECK2274,JW2275;locus_tag=b2280 NC_000913.3 RefSeq CDS 2395342 2395896 . - 0 ID=cds2264;Parent=gene2337;Dbxref=ASAP:ABE-0007536,UniProtKB/Swiss-Prot:P0AFE0,Genbank:NP_416783.1,EcoGene:EG12090,GeneID:946756;Name=NP_416783.1;Note=NADH dehydrogenase I chain J;gbkey=CDS;gene=nuoJ;product=NADH:ubiquinone oxidoreductase%2C membrane subunit J;protein_id=NP_416783.1;transl_table=11 NC_000913.3 RefSeq gene 2395908 2396450 . - . ID=gene2338;Dbxref=EcoGene:EG12089,GeneID:946757;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;gene_synonym=ECK2275,JW2276;locus_tag=b2281 NC_000913.3 RefSeq CDS 2395908 2396450 . - 0 ID=cds2265;Parent=gene2338;Dbxref=ASAP:ABE-0007539,UniProtKB/Swiss-Prot:P0AFD6,Genbank:NP_416784.1,EcoGene:EG12089,GeneID:946757;Name=NP_416784.1;Note=NADH dehydrogenase I chain I;gbkey=CDS;gene=nuoI;product=NADH:ubiquinone oxidoreductase%2C chain I;protein_id=NP_416784.1;transl_table=11 NC_000913.3 RefSeq gene 2396465 2397442 . - . ID=gene2339;Dbxref=EcoGene:EG12088,GeneID:946761;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;gene_synonym=ECK2276,JW2277;locus_tag=b2282 NC_000913.3 RefSeq CDS 2396465 2397442 . - 0 ID=cds2266;Parent=gene2339;Dbxref=ASAP:ABE-0007541,UniProtKB/Swiss-Prot:P0AFD4,Genbank:NP_416785.1,EcoGene:EG12088,GeneID:946761;Name=NP_416785.1;Note=NADH dehydrogenase I chain H;gbkey=CDS;gene=nuoH;product=NADH:ubiquinone oxidoreductase%2C membrane subunit H;protein_id=NP_416785.1;transl_table=11 NC_000913.3 RefSeq gene 2397439 2400165 . - . ID=gene2340;Dbxref=EcoGene:EG12087,GeneID:946762;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;gene_synonym=ECK2277,JW2278;locus_tag=b2283 NC_000913.3 RefSeq CDS 2397439 2400165 . - 0 ID=cds2267;Parent=gene2340;Dbxref=ASAP:ABE-0007543,UniProtKB/Swiss-Prot:P33602,Genbank:NP_416786.4,EcoGene:EG12087,GeneID:946762;Name=NP_416786.4;Note=NADH dehydrogenase I chain G;gbkey=CDS;gene=nuoG;product=NADH:ubiquinone oxidoreductase%2C chain G;protein_id=NP_416786.4;transl_table=11 NC_000913.3 RefSeq gene 2400218 2401555 . - . ID=gene2341;Dbxref=EcoGene:EG11774,GeneID:946753;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;gene_synonym=ECK2278,JW2279,nuoB;locus_tag=b2284 NC_000913.3 RefSeq CDS 2400218 2401555 . - 0 ID=cds2268;Parent=gene2341;Dbxref=ASAP:ABE-0007545,UniProtKB/Swiss-Prot:P31979,Genbank:NP_416787.1,EcoGene:EG11774,GeneID:946753;Name=NP_416787.1;Note=NADH dehydrogenase I chain F;gbkey=CDS;gene=nuoF;product=NADH:ubiquinone oxidoreductase%2C chain F;protein_id=NP_416787.1;transl_table=11 NC_000913.3 RefSeq gene 2401552 2402052 . - . ID=gene2342;Dbxref=EcoGene:EG12086,GeneID:946746;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;gene_synonym=ECK2279,JW2280;locus_tag=b2285 NC_000913.3 RefSeq CDS 2401552 2402052 . - 0 ID=cds2269;Parent=gene2342;Dbxref=ASAP:ABE-0007547,UniProtKB/Swiss-Prot:P0AFD1,Genbank:NP_416788.1,EcoGene:EG12086,GeneID:946746;Name=NP_416788.1;Note=NADH dehydrogenase I chain E;gbkey=CDS;gene=nuoE;product=NADH:ubiquinone oxidoreductase%2C chain E;protein_id=NP_416788.1;transl_table=11 NC_000913.3 RefSeq gene 2402055 2403845 . - . ID=gene2343;Dbxref=EcoGene:EG12084,GeneID:946759;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;gene_synonym=ECK2280,JW5375,nuoCD,nuoD;locus_tag=b2286 NC_000913.3 RefSeq CDS 2402055 2403845 . - 0 ID=cds2270;Parent=gene2343;Dbxref=ASAP:ABE-0007549,UniProtKB/Swiss-Prot:P33599,Genbank:NP_416789.2,EcoGene:EG12084,GeneID:946759;Name=NP_416789.2;Note=NADH dehydrogenase I chain C%2C D;gbkey=CDS;gene=nuoC;product=NADH:ubiquinone oxidoreductase%2C fused CD subunit;protein_id=NP_416789.2;transl_table=11 NC_000913.3 RefSeq gene 2403951 2404613 . - . ID=gene2344;Dbxref=EcoGene:EG12083,GeneID:946738;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;gene_synonym=ECK2281,JW5875;locus_tag=b2287 NC_000913.3 RefSeq CDS 2403951 2404613 . - 0 ID=cds2271;Parent=gene2344;Dbxref=ASAP:ABE-0007551,UniProtKB/Swiss-Prot:P0AFC7,Genbank:NP_416790.1,EcoGene:EG12083,GeneID:946738;Name=NP_416790.1;Note=NADH dehydrogenase I chain B;gbkey=CDS;gene=nuoB;product=NADH:ubiquinone oxidoreductase%2C chain B;protein_id=NP_416790.1;transl_table=11 NC_000913.3 RefSeq gene 2404629 2405072 . - . ID=gene2345;Dbxref=EcoGene:EG12082,GeneID:946764;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;gene_synonym=ECK2282,JW2283;locus_tag=b2288 NC_000913.3 RefSeq CDS 2404629 2405072 . - 0 ID=cds2272;Parent=gene2345;Dbxref=ASAP:ABE-0007553,UniProtKB/Swiss-Prot:P0AFC3,Genbank:NP_416791.3,EcoGene:EG12082,GeneID:946764;Name=NP_416791.3;Note=NADH dehydrogenase I chain A;gbkey=CDS;gene=nuoA;product=NADH:ubiquinone oxidoreductase%2C membrane subunit A;protein_id=NP_416791.3;transl_table=11 NC_000913.3 RefSeq gene 2405703 2406641 . - . ID=gene2346;Dbxref=EcoGene:EG12123,GeneID:946769;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;gene_synonym=ECK2283,genR,hexA,JW2284;locus_tag=b2289 NC_000913.3 RefSeq CDS 2405703 2406641 . - 0 ID=cds2273;Parent=gene2346;Dbxref=ASAP:ABE-0007555,UniProtKB/Swiss-Prot:P36771,Genbank:NP_416792.1,EcoGene:EG12123,GeneID:946769;Name=NP_416792.1;gbkey=CDS;gene=lrhA;product=transcriptional repressor of flagellar%2C motility and chemotaxis genes;protein_id=NP_416792.1;transl_table=11 NC_000913.3 RefSeq gene 2407561 2408778 . + . ID=gene2347;Dbxref=EcoGene:EG14101,GeneID:946772;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;gene_synonym=ECK2284,JW2287,yfbQ;locus_tag=b2290 NC_000913.3 RefSeq CDS 2407561 2408778 . + 0 ID=cds2274;Parent=gene2347;Dbxref=ASAP:ABE-0007560,UniProtKB/Swiss-Prot:P0A959,Genbank:NP_416793.1,EcoGene:EG14101,GeneID:946772;Name=NP_416793.1;Note=putative aminotransferase;gbkey=CDS;gene=alaA;product=glutamate-pyruvate aminotransferase%3B glutamic-pyruvic transaminase (GPT)%3B alanine transaminase;protein_id=NP_416793.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2408792 2408810 . + . ID=id280;Note=REP167 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2408862 2409461 . + . ID=gene2348;Dbxref=EcoGene:EG14102,GeneID:946771;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;gene_synonym=ECK2285,JW2288;locus_tag=b2291 NC_000913.3 RefSeq CDS 2408862 2409461 . + 0 ID=cds2275;Parent=gene2348;Dbxref=ASAP:ABE-0007563,UniProtKB/Swiss-Prot:P76491,Genbank:NP_416794.1,EcoGene:EG14102,GeneID:946771;Name=NP_416794.1;Note=putative alpha helix protein;gbkey=CDS;gene=yfbR;product=5'-nucleotidase;protein_id=NP_416794.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2409496 2409514 . + . ID=id281;Note=REP168 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2409520 2411352 . - . ID=gene2349;Dbxref=EcoGene:EG14103,GeneID:946766;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;gene_synonym=ECK2286,JW2289;locus_tag=b2292 NC_000913.3 RefSeq CDS 2409520 2411352 . - 0 ID=cds2276;Parent=gene2349;Dbxref=ASAP:ABE-0007565,UniProtKB/Swiss-Prot:P0AFU2,Genbank:NP_416795.1,EcoGene:EG14103,GeneID:946766;Name=NP_416795.1;Note=putative transport protein;gbkey=CDS;gene=yfbS;product=putative transporter;protein_id=NP_416795.1;transl_table=11 NC_000913.3 RefSeq gene 2411439 2412089 . - . ID=gene2350;Dbxref=EcoGene:EG14104,GeneID:946777;Name=yfbT;gbkey=Gene;gene=yfbT;gene_biotype=protein_coding;gene_synonym=ECK2287,JW5376;locus_tag=b2293 NC_000913.3 RefSeq CDS 2411439 2412089 . - 0 ID=cds2277;Parent=gene2350;Dbxref=ASAP:ABE-0007567,UniProtKB/Swiss-Prot:P77625,Genbank:NP_416796.2,EcoGene:EG14104,GeneID:946777;Name=NP_416796.2;Note=putative phosphatase;gbkey=CDS;gene=yfbT;product=sugar phosphatas;protein_id=NP_416796.2;transl_table=11 NC_000913.3 RefSeq gene 2412100 2412594 . - . ID=gene2351;Dbxref=EcoGene:EG14105,GeneID:946767;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;gene_synonym=ECK2288,JW2291;locus_tag=b2294 NC_000913.3 RefSeq CDS 2412100 2412594 . - 0 ID=cds2278;Parent=gene2351;Dbxref=ASAP:ABE-0007571,UniProtKB/Swiss-Prot:P0A8W8,Genbank:NP_416797.2,EcoGene:EG14105,GeneID:946767;Name=NP_416797.2;gbkey=CDS;gene=yfbU;product=UPF0304 family protein;protein_id=NP_416797.2;transl_table=11 NC_000913.3 RefSeq gene 2412677 2413132 . - . ID=gene2352;Dbxref=EcoGene:EG14106,GeneID:946774;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;gene_synonym=ECK2289,JW2292;locus_tag=b2295 NC_000913.3 RefSeq CDS 2412677 2413132 . - 0 ID=cds2279;Parent=gene2352;Dbxref=ASAP:ABE-0007575,UniProtKB/Swiss-Prot:P0A8D9,Genbank:NP_416798.1,EcoGene:EG14106,GeneID:946774;Name=NP_416798.1;gbkey=CDS;gene=yfbV;product=UPF0208 family inner membrane protein;protein_id=NP_416798.1;transl_table=11 NC_000913.3 RefSeq gene 2413470 2414672 . + . ID=gene2353;Dbxref=EcoGene:EG10027,GeneID:946775;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;gene_synonym=ECK2290,JW2293;locus_tag=b2296 NC_000913.3 RefSeq CDS 2413470 2414672 . + 0 ID=cds2280;Parent=gene2353;Dbxref=ASAP:ABE-0007579,UniProtKB/Swiss-Prot:P0A6A3,Genbank:NP_416799.1,EcoGene:EG10027,GeneID:946775;Name=NP_416799.1;Note=acetate kinase;gbkey=CDS;gene=ackA;product=acetate kinase A and propionate kinase 2;protein_id=NP_416799.1;transl_table=11 NC_000913.3 RefSeq gene 2414747 2416891 . + . ID=gene2354;Dbxref=EcoGene:EG20173,GeneID:946778;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;gene_synonym=ECK2291,JW2294;locus_tag=b2297 NC_000913.3 RefSeq CDS 2414747 2416891 . + 0 ID=cds2281;Parent=gene2354;Dbxref=ASAP:ABE-0007582,UniProtKB/Swiss-Prot:P0A9M8,Genbank:NP_416800.1,EcoGene:EG20173,GeneID:946778;Name=NP_416800.1;Note=phosphotransacetylase;gbkey=CDS;gene=pta;product=phosphate acetyltransferase;protein_id=NP_416800.1;transl_table=11 NC_000913.3 RefSeq gene 2417081 2418601 . + . ID=gene2355;Dbxref=EcoGene:EG12607,GeneID:946780;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;gene_synonym=ECK2292,JW2295;locus_tag=b2298 NC_000913.3 RefSeq CDS 2417081 2418601 . + 0 ID=cds2282;Parent=gene2355;Dbxref=ASAP:ABE-0007585,UniProtKB/Swiss-Prot:P39263,Genbank:NP_416801.2,EcoGene:EG12607,GeneID:946780;Name=NP_416801.2;Note=putative S-transferase;gbkey=CDS;gene=yfcC;product=putative inner membrane transporter%3B C4-dicarboxylate anaerobic carrier family protein;protein_id=NP_416801.2;transl_table=11 NC_000913.3 RefSeq gene 2418634 2419176 . - . ID=gene2356;Dbxref=EcoGene:EG14107,GeneID:946783;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;gene_synonym=ECK2293,JW2296;locus_tag=b2299 NC_000913.3 RefSeq CDS 2418634 2419176 . - 0 ID=cds2283;Parent=gene2356;Dbxref=ASAP:ABE-0007587,UniProtKB/Swiss-Prot:P65556,Genbank:NP_416802.1,EcoGene:EG14107,GeneID:946783;Name=NP_416802.1;Note=putative regulator;gbkey=CDS;gene=yfcD;product=putative NUDIX hydrolase;protein_id=NP_416802.1;transl_table=11 NC_000913.3 RefSeq gene 2419234 2419788 . - . ID=gene2357;Dbxref=EcoGene:EG14108,GeneID:946755;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;gene_synonym=ECK2294,JW5377;locus_tag=b2300 NC_000913.3 RefSeq CDS 2419234 2419788 . - 0 ID=cds2284;Parent=gene2357;Dbxref=ASAP:ABE-0007589,UniProtKB/Swiss-Prot:P67095,Genbank:NP_416803.3,EcoGene:EG14108,GeneID:946755;Name=NP_416803.3;gbkey=CDS;gene=yfcE;product=phosphodiesterase activity on bis-pNPP;protein_id=NP_416803.3;transl_table=11 NC_000913.3 RefSeq gene 2419841 2420485 . - . ID=gene2358;Dbxref=EcoGene:EG14109,GeneID:946749;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;gene_synonym=ECK2295,JW2298;locus_tag=b2301 NC_000913.3 RefSeq CDS 2419841 2420485 . - 0 ID=cds2285;Parent=gene2358;Dbxref=ASAP:ABE-0007593,UniProtKB/Swiss-Prot:P77544,Genbank:NP_416804.1,EcoGene:EG14109,GeneID:946749;Name=NP_416804.1;gbkey=CDS;gene=yfcF;product=glutathione S-transferase;protein_id=NP_416804.1;transl_table=11 NC_000913.3 RefSeq gene 2420621 2421268 . + . ID=gene2359;Dbxref=EcoGene:EG14110,GeneID:946763;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;gene_synonym=ECK2296,JW2299;locus_tag=b2302 NC_000913.3 RefSeq CDS 2420621 2421268 . + 0 ID=cds2286;Parent=gene2359;Dbxref=ASAP:ABE-0007600,UniProtKB/Swiss-Prot:P77526,Genbank:NP_416805.1,EcoGene:EG14110,GeneID:946763;Name=NP_416805.1;Note=putative S-transferase;gbkey=CDS;gene=yfcG;product=GSH-dependent disulfide bond oxidoreductase;protein_id=NP_416805.1;transl_table=11 NC_000913.3 RefSeq gene 2421325 2421687 . + . ID=gene2360;Dbxref=EcoGene:EG14263,GeneID:946781;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;gene_synonym=ECK2297,JW2300;locus_tag=b2303 NC_000913.3 RefSeq CDS 2421325 2421687 . + 0 ID=cds2287;Parent=gene2360;Dbxref=ASAP:ABE-0007603,UniProtKB/Swiss-Prot:P0AC19,Genbank:NP_416806.1,EcoGene:EG14263,GeneID:946781;Name=NP_416806.1;Note=D-erythro-7%2C8-dihydroneopterin tri P epimerase;gbkey=CDS;gene=folX;product=D-erythro-7%2C8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase;protein_id=NP_416806.1;transl_table=11 NC_000913.3 RefSeq gene 2421708 2422601 . + . ID=gene2361;Dbxref=EcoGene:EG14111,GeneID:946784;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;gene_synonym=ECK2298,JW2301;locus_tag=b2304 NC_000913.3 RefSeq CDS 2421708 2422601 . + 0 ID=cds2288;Parent=gene2361;Dbxref=ASAP:ABE-0007605,UniProtKB/Swiss-Prot:P77775,Genbank:NP_416807.1,EcoGene:EG14111,GeneID:946784;Name=NP_416807.1;Note=putative sugar nucleotide epimerase;gbkey=CDS;gene=yfcH;product=putative NAD-dependent nucleotide-sugar epimerase;protein_id=NP_416807.1;transl_table=11 NC_000913.3 RefSeq gene 2422649 2423539 . - . ID=gene2362;Dbxref=EcoGene:EG14112,GeneID:946787;Name=yfcI;gbkey=Gene;gene=yfcI;gene_biotype=protein_coding;gene_synonym=ECK2299,JW2302;locus_tag=b2305 NC_000913.3 RefSeq CDS 2422649 2423539 . - 0 ID=cds2289;Parent=gene2362;Dbxref=ASAP:ABE-0007607,UniProtKB/Swiss-Prot:P77768,Genbank:NP_416808.1,EcoGene:EG14112,GeneID:946787;Name=NP_416808.1;gbkey=CDS;gene=yfcI;product=transposase_31 family protein;protein_id=NP_416808.1;transl_table=11 NC_000913.3 RefSeq gene 2423736 2424509 . - . ID=gene2363;Dbxref=EcoGene:EG10452,GeneID:946789;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;gene_synonym=ECK2300,JW2303;locus_tag=b2306 NC_000913.3 RefSeq CDS 2423736 2424509 . - 0 ID=cds2290;Parent=gene2363;Dbxref=ASAP:ABE-0007610,UniProtKB/Swiss-Prot:P07109,Genbank:NP_416809.1,EcoGene:EG10452,GeneID:946789;Name=NP_416809.1;Note=ATP-binding component of histidine transport;gbkey=CDS;gene=hisP;product=histidine ABC transporter ATPase;protein_id=NP_416809.1;transl_table=11 NC_000913.3 RefSeq gene 2424517 2425233 . - . ID=gene2364;Dbxref=EcoGene:EG10007,GeneID:946790;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;gene_synonym=ECK2301,JW2304;locus_tag=b2307 NC_000913.3 RefSeq CDS 2424517 2425233 . - 0 ID=cds2291;Parent=gene2364;Dbxref=ASAP:ABE-0007613,UniProtKB/Swiss-Prot:P0AEU3,Genbank:NP_416810.1,EcoGene:EG10007,GeneID:946790;Name=NP_416810.1;Note=histidine transport%2C membrane protein M%3B membrane component of ABC superfamily;gbkey=CDS;gene=hisM;product=histidine ABC transporter permease;protein_id=NP_416810.1;transl_table=11 NC_000913.3 RefSeq gene 2425230 2425916 . - . ID=gene2365;Dbxref=EcoGene:EG12125,GeneID:947235;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;gene_synonym=ECK2302,JW2305;locus_tag=b2308 NC_000913.3 RefSeq CDS 2425230 2425916 . - 0 ID=cds2292;Parent=gene2365;Dbxref=ASAP:ABE-0007615,UniProtKB/Swiss-Prot:P52094,Genbank:NP_416811.1,EcoGene:EG12125,GeneID:947235;Name=NP_416811.1;Note=histidine transport system permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=hisQ;product=histidine ABC transporter permease;protein_id=NP_416811.1;transl_table=11 NC_000913.3 RefSeq gene 2426006 2426788 . - . ID=gene2366;Dbxref=EcoGene:EG12124,GeneID:945309;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;gene_synonym=ECK2303,JW2306;locus_tag=b2309 NC_000913.3 RefSeq CDS 2426006 2426788 . - 0 ID=cds2293;Parent=gene2366;Dbxref=ASAP:ABE-0007617,UniProtKB/Swiss-Prot:P0AEU0,Genbank:NP_416812.1,EcoGene:EG12124,GeneID:945309;Name=NP_416812.1;Note=histidine-binding periplasmic protein of high-affinity histidine transport system%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=hisJ;product=histidine ABC transporter periplasmic binding protein;protein_id=NP_416812.1;transl_table=11 NC_000913.3 RefSeq gene 2427009 2427791 . - . ID=gene2367;Dbxref=EcoGene:EG10072,GeneID:949030;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;gene_synonym=ECK2304,JW2307;locus_tag=b2310 NC_000913.3 RefSeq CDS 2427009 2427791 . - 0 ID=cds2294;Parent=gene2367;Dbxref=ASAP:ABE-0007621,UniProtKB/Swiss-Prot:P09551,Genbank:NP_416813.1,EcoGene:EG10072,GeneID:949030;Name=NP_416813.1;Note=lysine-%2C arginine-%2C ornithine-binding periplasmic protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=argT;product=lysine/arginine/ornithine transporter subunit;protein_id=NP_416813.1;transl_table=11 NC_000913.3 RefSeq gene 2428057 2428626 . - . ID=gene2368;Dbxref=EcoGene:EG11044,GeneID:949033;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;gene_synonym=dedF,ECK2305,JW2308;locus_tag=b2311 NC_000913.3 RefSeq CDS 2428057 2428626 . - 0 ID=cds2295;Parent=gene2368;Dbxref=ASAP:ABE-0007628,UniProtKB/Swiss-Prot:P0AG03,Genbank:NP_416814.1,EcoGene:EG11044,GeneID:949033;Name=NP_416814.1;gbkey=CDS;gene=ubiX;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=NP_416814.1;transl_table=11 NC_000913.3 RefSeq gene 2428721 2430238 . - . ID=gene2369;Dbxref=EcoGene:EG10794,GeneID:946794;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;gene_synonym=ade,ECK2306,JW2309,purC;locus_tag=b2312 NC_000913.3 RefSeq CDS 2428721 2430238 . - 0 ID=cds2296;Parent=gene2369;Dbxref=ASAP:ABE-0007631,UniProtKB/Swiss-Prot:P0AG16,Genbank:NP_416815.1,EcoGene:EG10794,GeneID:946794;Name=NP_416815.1;Note=amidophosphoribosyltransferase %3D PRPP amidotransferase;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=NP_416815.1;transl_table=11 NC_000913.3 RefSeq gene 2430275 2430763 . - . ID=gene2370;Dbxref=EcoGene:EG10169,GeneID:945055;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;gene_synonym=dedE,ECK2307,JW2310;locus_tag=b2313 NC_000913.3 RefSeq CDS 2430275 2430763 . - 0 ID=cds2297;Parent=gene2370;Dbxref=ASAP:ABE-0007633,UniProtKB/Swiss-Prot:P08550,Genbank:NP_416816.1,EcoGene:EG10169,GeneID:945055;Name=NP_416816.1;gbkey=CDS;gene=cvpA;product=colicin V production protein;protein_id=NP_416816.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2430929 2431012 . + . ID=id282;Note=REP169 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2431022 2431684 . - . ID=gene2371;Dbxref=EcoGene:EG10218,GeneID:944971;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;gene_synonym=ECK2308,JW5378;locus_tag=b2314 NC_000913.3 RefSeq CDS 2431022 2431684 . - 0 ID=cds2298;Parent=gene2371;Dbxref=ASAP:ABE-0007643,UniProtKB/Swiss-Prot:P09549,Genbank:NP_416817.2,EcoGene:EG10218,GeneID:944971;Name=NP_416817.2;Note=putative lipoprotein;gbkey=CDS;gene=dedD;product=membrane-anchored periplasmic protein involved in septation;protein_id=NP_416817.2;transl_table=11 NC_000913.3 RefSeq gene 2431674 2432942 . - . ID=gene2372;Dbxref=EcoGene:EG10327,GeneID:945451;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;gene_synonym=dedC,ECK2309,JW2312;locus_tag=b2315 NC_000913.3 RefSeq CDS 2431674 2432942 . - 0 ID=cds2299;Parent=gene2372;Dbxref=ASAP:ABE-0007645,UniProtKB/Swiss-Prot:P08192,Genbank:NP_416818.1,EcoGene:EG10327,GeneID:945451;Name=NP_416818.1;Note=dihydrofolate:folylpolyglutamate synthetase%3B dihydrofolate synthetase;gbkey=CDS;gene=folC;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=NP_416818.1;transl_table=11 NC_000913.3 RefSeq gene 2433012 2433926 . - . ID=gene2373;Dbxref=EcoGene:EG10217,GeneID:946796;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;gene_synonym=dedB,ECK2310,JW2313,usg;locus_tag=b2316 NC_000913.3 RefSeq CDS 2433012 2433926 . - 0 ID=cds2300;Parent=gene2373;Dbxref=ASAP:ABE-0007648,UniProtKB/Swiss-Prot:P0A9Q5,Genbank:NP_416819.1,EcoGene:EG10217,GeneID:946796;Name=NP_416819.1;Note=acetylCoA carboxylase%2C carboxytransferase component%2C beta subunit;gbkey=CDS;gene=accD;product=acetyl-CoA carboxylase%2C beta (carboxyltransferase) subunit;protein_id=NP_416819.1;transl_table=11 NC_000913.3 RefSeq gene 2434082 2434741 . - . ID=gene2374;Dbxref=EcoGene:EG10216,GeneID:946798;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;gene_synonym=ECK2311,JW2314;locus_tag=b2317 NC_000913.3 RefSeq CDS 2434082 2434741 . - 0 ID=cds2301;Parent=gene2374;Dbxref=ASAP:ABE-0007653,UniProtKB/Swiss-Prot:P0ABP6,Genbank:NP_416820.1,EcoGene:EG10216,GeneID:946798;Name=NP_416820.1;gbkey=CDS;gene=dedA;product=DedA family inner membrane protein;protein_id=NP_416820.1;transl_table=11 NC_000913.3 RefSeq gene 2434824 2435636 . - . ID=gene2375;Dbxref=EcoGene:EG10454,GeneID:946793;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=asuC,ECK2312,hisT,JW2315,leuK;locus_tag=b2318 NC_000913.3 RefSeq CDS 2434824 2435636 . - 0 ID=cds2302;Parent=gene2375;Dbxref=ASAP:ABE-0007657,UniProtKB/Swiss-Prot:P07649,Genbank:NP_416821.1,EcoGene:EG10454,GeneID:946793;Name=NP_416821.1;gbkey=CDS;gene=truA;product=tRNA pseudouridine(38-40) synthase;protein_id=NP_416821.1;transl_table=11 NC_000913.3 RefSeq gene 2435636 2436649 . - . ID=gene2376;Dbxref=EcoGene:EG11059,GeneID:946797;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;gene_synonym=ECK2313,JW2316;locus_tag=b2319 NC_000913.3 RefSeq CDS 2435636 2436649 . - 0 ID=cds2303;Parent=gene2376;Dbxref=ASAP:ABE-0007660,UniProtKB/Swiss-Prot:P08390,Genbank:NP_416822.1,EcoGene:EG11059,GeneID:946797;Name=NP_416822.1;Note=putative PTS system enzyme II A component;gbkey=CDS;gene=usg;product=putative semialdehyde dehydrogenase;protein_id=NP_416822.1;transl_table=11 NC_000913.3 RefSeq gene 2436715 2437851 . - . ID=gene2377;Dbxref=EcoGene:EG10692,GeneID:946785;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;gene_synonym=ECK2314,JW2317;locus_tag=b2320 NC_000913.3 RefSeq CDS 2436715 2437851 . - 0 ID=cds2304;Parent=gene2377;Dbxref=ASAP:ABE-0007663,UniProtKB/Swiss-Prot:P05459,Genbank:NP_416823.1,EcoGene:EG10692,GeneID:946785;Name=NP_416823.1;Note=erythronate-4-phosphate dehyrogenase;gbkey=CDS;gene=pdxB;product=erythronate-4-phosphate dehydrogenase;protein_id=NP_416823.1;transl_table=11 NC_000913.3 RefSeq gene 2437950 2438945 . + . ID=gene2378;Dbxref=EcoGene:EG10229,GeneID:946776;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;gene_synonym=div,ECK2315,JW2318,rflH;locus_tag=b2321 NC_000913.3 RefSeq CDS 2437950 2438945 . + 0 ID=cds2305;Parent=gene2378;Dbxref=ASAP:ABE-0007667,UniProtKB/Swiss-Prot:P15286,Genbank:NP_416824.1,EcoGene:EG10229,GeneID:946776;Name=NP_416824.1;Note=flagellar assembly protein;gbkey=CDS;gene=flk;product=putative flagella assembly protein;protein_id=NP_416824.1;transl_table=11 NC_000913.3 RefSeq gene 2438942 2440120 . - . ID=gene2379;Dbxref=EcoGene:EG14113,GeneID:946791;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;gene_synonym=ECK2316,JW2319;locus_tag=b2322 NC_000913.3 RefSeq CDS 2438942 2440120 . - 0 ID=cds2306;Parent=gene2379;Dbxref=ASAP:ABE-0007669,UniProtKB/Swiss-Prot:P77549,Genbank:NP_416825.1,EcoGene:EG14113,GeneID:946791;Name=NP_416825.1;Note=putative transport protein;gbkey=CDS;gene=yfcJ;product=putative arabinose efflux transporter;protein_id=NP_416825.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2440343 2440378 . + . ID=id283;Note=REP170 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2440385 2441605 . - . ID=gene2380;Dbxref=EcoGene:EG10274,GeneID:946799;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;gene_synonym=ECK2317,fabC,JW2320;locus_tag=b2323 NC_000913.3 RefSeq CDS 2440385 2441605 . - 0 ID=cds2307;Parent=gene2380;Dbxref=ASAP:ABE-0007675,UniProtKB/Swiss-Prot:P0A953,Genbank:NP_416826.1,EcoGene:EG10274,GeneID:946799;Name=NP_416826.1;gbkey=CDS;gene=fabB;product=3-oxoacyl-[acyl-carrier-protein] synthase I;protein_id=NP_416826.1;transl_table=11 NC_000913.3 RefSeq gene 2441764 2443770 . + . ID=gene2381;Dbxref=EcoGene:EG14114,GeneID:946800;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=ECK2318,JW5380,trmC,yfcK;locus_tag=b2324 NC_000913.3 RefSeq CDS 2441764 2443770 . + 0 ID=cds2308;Parent=gene2381;Dbxref=ASAP:ABE-0007681,UniProtKB/Swiss-Prot:P77182,Genbank:NP_416827.4,EcoGene:EG14114,GeneID:946800;Name=NP_416827.4;Note=putative peptidase;gbkey=CDS;gene=mnmC;product=fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme;protein_id=NP_416827.4;transl_table=11 NC_000913.3 RefSeq repeat_region 2443789 2443868 . + . ID=id284;Note=REP171 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2443891 2444169 . - . ID=gene2382;Dbxref=EcoGene:EG14115,GeneID:946804;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;gene_synonym=ECK2319,JW2322;locus_tag=b2325 NC_000913.3 RefSeq CDS 2443891 2444169 . - 0 ID=cds2309;Parent=gene2382;Dbxref=ASAP:ABE-0007684,UniProtKB/Swiss-Prot:P64540,Genbank:NP_416828.1,EcoGene:EG14115,GeneID:946804;Name=NP_416828.1;gbkey=CDS;gene=yfcL;product=uncharacterized protein;protein_id=NP_416828.1;transl_table=11 NC_000913.3 RefSeq gene 2444203 2444751 . - . ID=gene2383;Dbxref=EcoGene:EG14116,GeneID:946807;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;gene_synonym=ECK2320,JW5381,yfcM;locus_tag=b2326 NC_000913.3 RefSeq CDS 2444203 2444751 . - 0 ID=cds2310;Parent=gene2383;Dbxref=ASAP:ABE-0007686,UniProtKB/Swiss-Prot:P76938,Genbank:NP_416829.1,EcoGene:EG14116,GeneID:946807;Name=NP_416829.1;Note=putative transporting ATPase;gbkey=CDS;gene=epmC;product=Elongation Factor P Lys34 hydroxylase;protein_id=NP_416829.1;transl_table=11 NC_000913.3 RefSeq gene 2444751 2445560 . - . ID=gene2384;Dbxref=EcoGene:EG11144,GeneID:946808;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;gene_synonym=ECK2321,JW2324;locus_tag=b2327 NC_000913.3 RefSeq CDS 2444751 2445560 . - 0 ID=cds2311;Parent=gene2384;Dbxref=ASAP:ABE-0007689,UniProtKB/Swiss-Prot:P0AD30,Genbank:NP_416830.1,EcoGene:EG11144,GeneID:946808;Name=NP_416830.1;Note=putative structural protein;gbkey=CDS;gene=yfcA;product=TauE/TSUP family inner membrane protein;protein_id=NP_416830.1;transl_table=11 NC_000913.3 RefSeq gene 2445560 2446384 . - . ID=gene2385;Dbxref=EcoGene:EG10580,GeneID:946812;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;gene_synonym=ECK2322,JW2325;locus_tag=b2328 NC_000913.3 RefSeq CDS 2445560 2446384 . - 0 ID=cds2312;Parent=gene2385;Dbxref=ASAP:ABE-0007691,UniProtKB/Swiss-Prot:P0C0T5,Genbank:NP_416831.1,EcoGene:EG10580,GeneID:946812;Name=NP_416831.1;Note=murein DD-endopeptidase%2C penicillin-insensitive;gbkey=CDS;gene=mepA;product=murein DD-endopeptidase;protein_id=NP_416831.1;transl_table=11 NC_000913.3 RefSeq gene 2446388 2447473 . - . ID=gene2386;Dbxref=EcoGene:EG10075,GeneID:946814;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;gene_synonym=ECK2323,JW2326;locus_tag=b2329 NC_000913.3 RefSeq CDS 2446388 2447473 . - 0 ID=cds2313;Parent=gene2386;Dbxref=ASAP:ABE-0007693,UniProtKB/Swiss-Prot:P12008,Genbank:NP_416832.1,EcoGene:EG10075,GeneID:946814;Name=NP_416832.1;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=NP_416832.1;transl_table=11 NC_000913.3 RefSeq gene 2447508 2448440 . - . ID=gene2387;Dbxref=EcoGene:EG12449,GeneID:946805;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;gene_synonym=ECK2324,JW5841,yfcB;locus_tag=b2330 NC_000913.3 RefSeq CDS 2447508 2448440 . - 0 ID=cds2314;Parent=gene2387;Dbxref=ASAP:ABE-0007695,UniProtKB/Swiss-Prot:P39199,Genbank:NP_416833.4,EcoGene:EG12449,GeneID:946805;Name=NP_416833.4;Note=putative adenine-specific methylase;gbkey=CDS;gene=prmB;product=N5-glutamine methyltransferase;protein_id=NP_416833.4;transl_table=11 NC_000913.3 RefSeq gene 2448606 2449157 . + . ID=gene2388;Dbxref=EcoGene:EG14117,GeneID:944847;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;gene_synonym=ECK2325,JW2328,yfcN;locus_tag=b2331 NC_000913.3 RefSeq CDS 2448606 2449157 . + 0 ID=cds2315;Parent=gene2388;Dbxref=ASAP:ABE-0007698,UniProtKB/Swiss-Prot:P0A8B2,Genbank:NP_416834.1,EcoGene:EG14117,GeneID:944847;Name=NP_416834.1;gbkey=CDS;gene=smrB;product=putative DNA endonuclease;protein_id=NP_416834.1;transl_table=11 NC_000913.3 RefSeq gene 2449228 2450049 . - . ID=gene2389;Dbxref=EcoGene:EG14118,GeneID:946620;Name=yfcO;gbkey=Gene;gene=yfcO;gene_biotype=protein_coding;gene_synonym=ECK2326,JW2329;locus_tag=b2332 NC_000913.3 RefSeq CDS 2449228 2450049 . - 0 ID=cds2316;Parent=gene2389;Dbxref=ASAP:ABE-0007700,UniProtKB/Swiss-Prot:P76498,Genbank:NP_416835.2,EcoGene:EG14118,GeneID:946620;Name=NP_416835.2;gbkey=CDS;gene=yfcO;product=DUF2544 family putative outer membrane protein;protein_id=NP_416835.2;transl_table=11 NC_000913.3 RefSeq gene 2450051 2450590 . - . ID=gene2390;Dbxref=EcoGene:EG14119,GeneID:946788;Name=yfcP;gbkey=Gene;gene=yfcP;gene_biotype=protein_coding;gene_synonym=ECK2327,JW2330;locus_tag=b2333 NC_000913.3 RefSeq CDS 2450051 2450590 . - 0 ID=cds2317;Parent=gene2390;Dbxref=ASAP:ABE-0007702,UniProtKB/Swiss-Prot:P76499,Genbank:NP_416836.1,EcoGene:EG14119,GeneID:946788;Name=NP_416836.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=yfcP;product=putative fimbrial-like adhesin protein;protein_id=NP_416836.1;transl_table=11 NC_000913.3 RefSeq gene 2450587 2451075 . - . ID=gene2391;Dbxref=EcoGene:EG14120,GeneID:946779;Name=yfcQ;gbkey=Gene;gene=yfcQ;gene_biotype=protein_coding;gene_synonym=ECK2328,JW2331;locus_tag=b2334 NC_000913.3 RefSeq CDS 2450587 2451075 . - 0 ID=cds2318;Parent=gene2391;Dbxref=ASAP:ABE-0007705,UniProtKB/Swiss-Prot:P76500,Genbank:NP_416837.1,EcoGene:EG14120,GeneID:946779;Name=NP_416837.1;gbkey=CDS;gene=yfcQ;product=putative fimbrial-like adhesin protein;protein_id=NP_416837.1;transl_table=11 NC_000913.3 RefSeq gene 2451072 2451584 . - . ID=gene2392;Dbxref=EcoGene:EG14121,GeneID:946818;Name=yfcR;gbkey=Gene;gene=yfcR;gene_biotype=protein_coding;gene_synonym=ECK2329,JW2332;locus_tag=b2335 NC_000913.3 RefSeq CDS 2451072 2451584 . - 0 ID=cds2319;Parent=gene2392;Dbxref=ASAP:ABE-0007707,UniProtKB/Swiss-Prot:P76501,Genbank:NP_416838.1,EcoGene:EG14121,GeneID:946818;Name=NP_416838.1;Note=putative fimbrial protein;gbkey=CDS;gene=yfcR;product=putative fimbrial-like adhesin protein;protein_id=NP_416838.1;transl_table=11 NC_000913.3 RefSeq gene 2451584 2452336 . - . ID=gene2393;Dbxref=EcoGene:EG14122,GeneID:946418;Name=yfcS;gbkey=Gene;gene=yfcS;gene_biotype=protein_coding;gene_synonym=ECK2330,JW2333;locus_tag=b2336 NC_000913.3 RefSeq CDS 2451584 2452336 . - 0 ID=cds2320;Parent=gene2393;Dbxref=ASAP:ABE-0007709,UniProtKB/Swiss-Prot:P77599,Genbank:NP_416839.1,EcoGene:EG14122,GeneID:946418;Name=NP_416839.1;Note=putative chaperone;gbkey=CDS;gene=yfcS;product=putative periplasmic pilin chaperone;protein_id=NP_416839.1;transl_table=11 NC_000913.3 RefSeq gene 2452356 2455001 . - . ID=gene2394;Dbxref=EcoGene:EG14124,GeneID:1450268;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=pseudogene;gene_synonym=ECK2332,JW2334,yfcT;locus_tag=b4661;pseudo=true NC_000913.3 RefSeq CDS 2452356 2455001 . - 0 ID=cds2321;Parent=gene2394;Dbxref=ASAP:ABE-0007711,ASAP:ABE-0007713,UniProtKB/Swiss-Prot:P77196,EcoGene:EG14124,GeneID:1450268;Note=pseudogene%2C FimD fimbrial export usher family%3Bputative membrane%3B Not classified~putative outer membrane protein;gbkey=CDS;gene=yfcU;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2455083 2455646 . - . ID=gene2395;Dbxref=EcoGene:EG14125,GeneID:949109;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;gene_synonym=ECK2333,JW2336;locus_tag=b2339 NC_000913.3 RefSeq CDS 2455083 2455646 . - 0 ID=cds2322;Parent=gene2395;Dbxref=ASAP:ABE-0007715,UniProtKB/Swiss-Prot:P77288,Genbank:NP_416841.1,EcoGene:EG14125,GeneID:949109;Name=NP_416841.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=yfcV;product=putative fimbrial-like adhesin protein;protein_id=NP_416841.1;transl_table=11 NC_000913.3 RefSeq gene 2456327 2456812 . - . ID=gene2396;Dbxref=EcoGene:EG14126,GeneID:946815;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;gene_synonym=ECK2334,JW2337,yfcW;locus_tag=b2340 NC_000913.3 RefSeq CDS 2456327 2456812 . - 0 ID=cds2323;Parent=gene2396;Dbxref=ASAP:ABE-0007720,UniProtKB/Swiss-Prot:P76502,Genbank:NP_416842.1,EcoGene:EG14126,GeneID:946815;Name=NP_416842.1;gbkey=CDS;gene=sixA;product=phosphohistidine phosphatase;protein_id=NP_416842.1;transl_table=11 NC_000913.3 RefSeq gene 2457015 2459159 . - . ID=gene2397;Dbxref=EcoGene:EG14127,GeneID:949097;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;gene_synonym=ECK2335,JW2338,yfcX;locus_tag=b2341 NC_000913.3 RefSeq CDS 2457015 2459159 . - 0 ID=cds2324;Parent=gene2397;Dbxref=ASAP:ABE-0007723,UniProtKB/Swiss-Prot:P77399,Genbank:NP_416843.1,EcoGene:EG14127,GeneID:949097;Name=NP_416843.1;Note=putative enzyme;gbkey=CDS;gene=fadJ;product=enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase;protein_id=NP_416843.1;transl_table=11 NC_000913.3 RefSeq gene 2459159 2460469 . - . ID=gene2398;Dbxref=EcoGene:EG14128,GeneID:948823;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;gene_synonym=ECK2336,JW2339,yfcY;locus_tag=b2342 NC_000913.3 RefSeq CDS 2459159 2460469 . - 0 ID=cds2325;Parent=gene2398;Dbxref=ASAP:ABE-0007725,UniProtKB/Swiss-Prot:P76503,Genbank:NP_416844.1,EcoGene:EG14128,GeneID:948823;Name=NP_416844.1;Note=putative acyltransferase;gbkey=CDS;gene=fadI;product=beta-ketoacyl-CoA thiolase%2C anaerobic%2C subunit;protein_id=NP_416844.1;transl_table=11 NC_000913.3 RefSeq gene 2460650 2460934 . - . ID=gene2399;Dbxref=EcoGene:EG14129,GeneID:948817;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;gene_synonym=ECK2337,JW2340;locus_tag=b2343 NC_000913.3 RefSeq CDS 2460650 2460934 . - 0 ID=cds2326;Parent=gene2399;Dbxref=ASAP:ABE-0007731,UniProtKB/Swiss-Prot:P0AD33,Genbank:NP_416845.2,EcoGene:EG14129,GeneID:948817;Name=NP_416845.2;gbkey=CDS;gene=yfcZ;product=UPF0381 family protein;protein_id=NP_416845.2;transl_table=11 NC_000913.3 RefSeq gene 2461306 2462646 . + . ID=gene2400;Dbxref=EcoGene:EG10280,GeneID:946820;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;gene_synonym=ECK2338,JW2341,ttr;locus_tag=b2344 NC_000913.3 RefSeq CDS 2461306 2462646 . + 0 ID=cds2327;Parent=gene2400;Dbxref=ASAP:ABE-0007740,UniProtKB/Swiss-Prot:P10384,Genbank:NP_416846.2,EcoGene:EG10280,GeneID:946820;Name=NP_416846.2;Note=long-chain fatty acid transport protein (outer membrane flp protein);gbkey=CDS;gene=fadL;product=long-chain fatty acid outer membrane transporter;protein_id=NP_416846.2;transl_table=11 NC_000913.3 RefSeq gene 2463012 2464070 . + . ID=gene2401;Dbxref=EcoGene:EG14130,GeneID:946819;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;gene_synonym=ECK2339,JW2342;locus_tag=b2345 NC_000913.3 RefSeq CDS 2463012 2464070 . + 0 ID=cds2328;Parent=gene2401;Dbxref=ASAP:ABE-0007743,UniProtKB/Swiss-Prot:P76505,Genbank:NP_416847.1,EcoGene:EG14130,GeneID:946819;Name=NP_416847.1;gbkey=CDS;gene=yfdF;product=uncharacterized protein;protein_id=NP_416847.1;transl_table=11 NC_000913.3 RefSeq gene 2464252 2465007 . - . ID=gene2402;Dbxref=EcoGene:EG14276,GeneID:945582;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;gene_synonym=ECK2340,JW2343,vacJ;locus_tag=b2346 NC_000913.3 RefSeq CDS 2464252 2465007 . - 0 ID=cds2329;Parent=gene2402;Dbxref=ASAP:ABE-0007745,UniProtKB/Swiss-Prot:P76506,Genbank:NP_416848.1,EcoGene:EG14276,GeneID:945582;Name=NP_416848.1;Note=lipoprotein precursor;gbkey=CDS;gene=mlaA;product=ABC transporter maintaining OM lipid asymmetry%2C OM lipoprotein component;protein_id=NP_416848.1;transl_table=11 NC_000913.3 RefSeq gene 2465301 2466233 . + . ID=gene2403;Dbxref=EcoGene:EG12420,GeneID:944801;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;gene_synonym=ECK2341,JW2344;locus_tag=b2347 NC_000913.3 RefSeq CDS 2465301 2466233 . + 0 ID=cds2330;Parent=gene2403;Dbxref=ASAP:ABE-0007751,UniProtKB/Swiss-Prot:P37327,Genbank:NP_416849.1,EcoGene:EG12420,GeneID:944801;Name=NP_416849.1;Note=putative transport protein;gbkey=CDS;gene=yfdC;product=putative inner membrane protein;protein_id=NP_416849.1;transl_table=11 NC_000913.3 RefSeq gene 2466309 2466383 . + . ID=gene2404;Dbxref=EcoGene:EG30016,GeneID:945486;Name=argW;gbkey=Gene;gene=argW;gene_biotype=tRNA;gene_synonym=ECK2342,JWR0044;locus_tag=b2348 NC_000913.3 RefSeq tRNA 2466309 2466383 . + . ID=rna72;Parent=gene2404;Dbxref=ASAP:ABE-0007753,EcoGene:EG30016,GeneID:945486;Note=anticodon: CCU;gbkey=tRNA;gene=argW;product=tRNA-Arg NC_000913.3 RefSeq exon 2466309 2466383 . + . ID=id285;Parent=rna72;Dbxref=ASAP:ABE-0007753,EcoGene:EG30016,GeneID:945486;Note=anticodon: CCU;gbkey=tRNA;gene=argW;product=tRNA-Arg NC_000913.3 RefSeq region 2466385 2476599 . + . ID=id286;Note=cryptic prophage CPS-53;gbkey=misc_feature NC_000913.3 RefSeq gene 2466545 2467702 . + . ID=gene2405;Dbxref=EcoGene:EG12413,GeneID:946821;Name=intS;gbkey=Gene;gene=intS;gene_biotype=protein_coding;gene_synonym=ECK2343,intC,JW2345,yfdB;locus_tag=b2349 NC_000913.3 RefSeq CDS 2466545 2467702 . + 0 ID=cds2331;Parent=gene2405;Dbxref=ASAP:ABE-0007756,UniProtKB/Swiss-Prot:P37326,Genbank:NP_416850.1,EcoGene:EG12413,GeneID:946821;Name=NP_416850.1;gbkey=CDS;gene=intS;product=CPS-53 (KpLE1) prophage%3B putative prophage CPS-53 integrase;protein_id=NP_416850.1;transl_table=11 NC_000913.3 RefSeq gene 2467855 2468217 . + . ID=gene2406;Dbxref=EcoGene:EG14131,GeneID:948821;Name=gtrA;gbkey=Gene;gene=gtrA;gene_biotype=protein_coding;gene_synonym=ECK2344,JW2346,yfdG;locus_tag=b2350 NC_000913.3 RefSeq CDS 2467855 2468217 . + 0 ID=cds2332;Parent=gene2406;Dbxref=ASAP:ABE-0007761,UniProtKB/Swiss-Prot:P77682,Genbank:NP_416851.1,EcoGene:EG14131,GeneID:948821;Name=NP_416851.1;gbkey=CDS;gene=gtrA;product=CPS-53 (KpLE1) prophage%3B bactoprenol-linked glucose translocase/flippase;protein_id=NP_416851.1;transl_table=11 NC_000913.3 RefSeq gene 2468214 2469134 . + . ID=gene2407;Dbxref=EcoGene:EG14132,GeneID:949098;Name=gtrB;gbkey=Gene;gene=gtrB;gene_biotype=protein_coding;gene_synonym=ECK2345,JW2347,yfdH;locus_tag=b2351 NC_000913.3 RefSeq CDS 2468214 2469134 . + 0 ID=cds2333;Parent=gene2407;Dbxref=ASAP:ABE-0007763,UniProtKB/Swiss-Prot:P77293,Genbank:NP_416852.1,EcoGene:EG14132,GeneID:949098;Name=NP_416852.1;gbkey=CDS;gene=gtrB;product=CPS-53 (KpLE1) prophage%3B bactoprenol glucosyl transferase;protein_id=NP_416852.1;transl_table=11 NC_000913.3 RefSeq gene 2469131 2470462 . + . ID=gene2408;Dbxref=EcoGene:EG14133,GeneID:946822;Name=gtrS;gbkey=Gene;gene=gtrS;gene_biotype=protein_coding;gene_synonym=ECK2346,gtrIV,JW5382,yfdI;locus_tag=b2352 NC_000913.3 RefSeq CDS 2469131 2470462 . + 0 ID=cds2334;Parent=gene2408;Dbxref=ASAP:ABE-0007765,UniProtKB/Swiss-Prot:P76507,Genbank:NP_416853.1,EcoGene:EG14133,GeneID:946822;Name=NP_416853.1;Note=putative ligase;gbkey=CDS;gene=gtrS;product=serotype-specific glucosyl transferase%2C CPS-53 (KpLE1) prophage;protein_id=NP_416853.1;transl_table=11 NC_000913.3 RefSeq gene 2470815 2471105 . + . ID=gene2409;Dbxref=EcoGene:EG14134,GeneID:946825;Name=tfaS;gbkey=Gene;gene=tfaS;gene_biotype=pseudogene;gene_synonym=ECK2347,JW5383,yfdJ;locus_tag=b2353;pseudo=true NC_000913.3 RefSeq CDS 2470815 2471105 . + 0 ID=cds2335;Parent=gene2409;Dbxref=ASAP:ABE-0007768,UniProtKB/Swiss-Prot:P77326,EcoGene:EG14134,GeneID:946825;Note=pseudogene%2C CPS-53 (KpLE1) prophage%3B tail fiber assembly protein fragment%3BPhage or Prophage Related;gbkey=CDS;gene=tfaS;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2471077 2471517 . - . ID=gene2410;Dbxref=EcoGene:EG14135,GeneID:948822;Name=yfdK;gbkey=Gene;gene=yfdK;gene_biotype=protein_coding;gene_synonym=ECK2348,JW2350;locus_tag=b2354 NC_000913.3 RefSeq CDS 2471077 2471517 . - 0 ID=cds2336;Parent=gene2410;Dbxref=ASAP:ABE-0007770,UniProtKB/Swiss-Prot:P77656,Genbank:NP_416855.1,EcoGene:EG14135,GeneID:948822;Name=NP_416855.1;gbkey=CDS;gene=yfdK;product=CPS-53 (KpLE1) prophage%3B conserved protein;protein_id=NP_416855.1;transl_table=11 NC_000913.3 RefSeq gene 2471544 2472122 . - . ID=gene2411;Dbxref=EcoGene:EG14136,GeneID:949099;Name=yfdL;gbkey=Gene;gene=yfdL;gene_biotype=pseudogene;gene_synonym=ECK2349,JW5384;locus_tag=b2355;pseudo=true NC_000913.3 RefSeq CDS 2471544 2472122 . - 0 ID=cds2337;Parent=gene2411;Dbxref=ASAP:ABE-0007773,UniProtKB/Swiss-Prot:P76508,EcoGene:EG14136,GeneID:949099;Note=pseudogene%2C CPS-53 (KpLE1) prophage%3BPhage or Prophage Related;gbkey=CDS;gene=yfdL;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2472118 2472387 . - . ID=gene2412;Dbxref=EcoGene:EG12950,GeneID:945416;Name=yfdM;gbkey=Gene;gene=yfdM;gene_biotype=pseudogene;gene_synonym=ECK2350,JW2352,yzyB;locus_tag=b2356;pseudo=true NC_000913.3 RefSeq CDS 2472118 2472387 . - 0 ID=cds2338;Parent=gene2412;Dbxref=ASAP:ABE-0007775,UniProtKB/Swiss-Prot:P76509,EcoGene:EG12950,GeneID:945416;Note=CPS-53 (KpLE1) prophage%3B putative methyltransferase%3BPhage or Prophage Related;gbkey=CDS;gene=yfdM;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2472387 2472881 . - . ID=gene2413;Dbxref=EcoGene:EG12949,GeneID:946419;Name=yfdN;gbkey=Gene;gene=yfdN;gene_biotype=protein_coding;gene_synonym=ECK2351,JW5385,yzyA;locus_tag=b2357 NC_000913.3 RefSeq CDS 2472387 2472881 . - 0 ID=cds2339;Parent=gene2413;Dbxref=ASAP:ABE-0007777,UniProtKB/Swiss-Prot:P76510,Genbank:NP_416858.1,EcoGene:EG12949,GeneID:946419;Name=NP_416858.1;gbkey=CDS;gene=yfdN;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=NP_416858.1;transl_table=11 NC_000913.3 RefSeq gene 2472878 2473585 . - . ID=gene2414;Dbxref=EcoGene:EG14137,GeneID:947403;Name=oweS;gbkey=Gene;gene=oweS;gene_biotype=pseudogene;gene_synonym=ECK2352,JW2355,yfdO;locus_tag=b2358;pseudo=true NC_000913.3 RefSeq CDS 2472878 2473585 . - 0 ID=cds2340;Parent=gene2414;Dbxref=ASAP:ABE-0007779,UniProtKB/Swiss-Prot:P0AD35,EcoGene:EG14137,GeneID:947403;Note=pseudogene%2C CPS-53 (KpLE1) prophage%3B bacteriophage replication protein O family%3BPhage or Prophage Related;gbkey=CDS;gene=oweS;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2473604 2473966 . + . ID=gene2415;Dbxref=EcoGene:EG14138,GeneID:945565;Name=yfdP;gbkey=Gene;gene=yfdP;gene_biotype=protein_coding;gene_synonym=ECK2353,JW2356;locus_tag=b2359 NC_000913.3 RefSeq CDS 2473604 2473966 . + 0 ID=cds2341;Parent=gene2415;Dbxref=ASAP:ABE-0007785,UniProtKB/Swiss-Prot:P76512,Genbank:NP_416860.4,EcoGene:EG14138,GeneID:945565;Name=NP_416860.4;gbkey=CDS;gene=yfdP;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=NP_416860.4;transl_table=11 NC_000913.3 RefSeq gene 2474032 2474856 . + . ID=gene2416;Dbxref=EcoGene:EG14139,GeneID:946827;Name=yfdQ;gbkey=Gene;gene=yfdQ;gene_biotype=protein_coding;gene_synonym=ECK2354,JW2357;locus_tag=b2360 NC_000913.3 RefSeq CDS 2474032 2474856 . + 0 ID=cds2342;Parent=gene2416;Dbxref=ASAP:ABE-0007788,UniProtKB/Swiss-Prot:P76513,Genbank:NP_416861.1,EcoGene:EG14139,GeneID:946827;Name=NP_416861.1;gbkey=CDS;gene=yfdQ;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=NP_416861.1;transl_table=11 NC_000913.3 RefSeq gene 2474984 2475520 . + . ID=gene2417;Dbxref=EcoGene:EG14140,GeneID:946834;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;gene_synonym=ECK2355,JW2358;locus_tag=b2361 NC_000913.3 RefSeq CDS 2474984 2475520 . + 0 ID=cds2343;Parent=gene2417;Dbxref=ASAP:ABE-0007791,UniProtKB/Swiss-Prot:P76514,Genbank:NP_416862.2,EcoGene:EG14140,GeneID:946834;Name=NP_416862.2;gbkey=CDS;gene=yfdR;product=CPS-53 (KpLE1) prophage%3B conserved protein;protein_id=NP_416862.2;transl_table=11 NC_000913.3 RefSeq gene 2475511 2475873 . + . ID=gene2418;Dbxref=EcoGene:EG14141,GeneID:946426;Name=yfdS;gbkey=Gene;gene=yfdS;gene_biotype=protein_coding;gene_synonym=ECK2356,JW2359;locus_tag=b2362 NC_000913.3 RefSeq CDS 2475511 2475873 . + 0 ID=cds2344;Parent=gene2418;Dbxref=ASAP:ABE-0007793,UniProtKB/Swiss-Prot:P76515,Genbank:NP_416863.1,EcoGene:EG14141,GeneID:946426;Name=NP_416863.1;gbkey=CDS;gene=yfdS;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=NP_416863.1;transl_table=11 NC_000913.3 RefSeq gene 2475873 2476178 . + . ID=gene2419;Dbxref=EcoGene:EG14142,GeneID:946836;Name=yfdT;gbkey=Gene;gene=yfdT;gene_biotype=protein_coding;gene_synonym=ECK2357,JW5887;locus_tag=b2363 NC_000913.3 RefSeq CDS 2475873 2476178 . + 0 ID=cds2345;Parent=gene2419;Dbxref=ASAP:ABE-0007795,UniProtKB/Swiss-Prot:P76516,Genbank:NP_416864.1,EcoGene:EG14142,GeneID:946836;Name=NP_416864.1;gbkey=CDS;gene=yfdT;product=CPS-53 (KpLE1) prophage%3B uncharacterized protein;protein_id=NP_416864.1;transl_table=11 NC_000913.3 RefSeq gene 2476181 2476231 . + . ID=gene2420;Dbxref=EcoGene:EG14428,GeneID:1450283;Name=ypdJ;gbkey=Gene;gene=ypdJ;gene_biotype=pseudogene;gene_synonym=ECK2358,JW5386;locus_tag=b4545;pseudo=true NC_000913.3 RefSeq CDS 2476181 2476231 . + 0 ID=cds2346;Parent=gene2420;Dbxref=ASAP:ABE-0285066,UniProtKB/Swiss-Prot:Q2EET0,EcoGene:EG14428,GeneID:1450283;Note=exisonase remnant;gbkey=CDS;gene=ypdJ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2476310 2476510 . + . ID=gene2421;Dbxref=EcoGene:EG14411,GeneID:1450232;Name=torI;gbkey=Gene;gene=torI;gene_biotype=protein_coding;gene_synonym=ECK2359,JW5387;locus_tag=b4501 NC_000913.3 RefSeq CDS 2476310 2476510 . + 0 ID=cds2347;Parent=gene2421;Dbxref=ASAP:ABE-0269710,UniProtKB/Swiss-Prot:Q2EES9,Genbank:YP_588463.1,EcoGene:EG14411,GeneID:1450232;Name=YP_588463.1;gbkey=CDS;gene=torI;product=response regulator inhibitor for tor operon;protein_id=YP_588463.1;transl_table=11 NC_000913.3 RefSeq gene 2476584 2476598 . + . ID=gene2422;Dbxref=EcoGene:EG31173,GeneID:5625569;Name=pawZ;gbkey=Gene;gene=pawZ;gene_biotype=tRNA_pseudogene;gene_synonym=ECK4464;locus_tag=b4643;pseudo=true NC_000913.3 RefSeq tRNA 2476584 2476598 . + . ID=rna73;Parent=gene2422;Dbxref=EcoGene:EG31173,GeneID:5625569;gbkey=tRNA;gene=pawZ;product=tRNA-OTHER;pseudo=true NC_000913.3 RefSeq exon 2476584 2476598 . + . ID=id287;Parent=rna73;Dbxref=EcoGene:EG31173,GeneID:5625569;gbkey=tRNA;gene=pawZ;product=tRNA-OTHER;pseudo=true NC_000913.3 RefSeq gene 2476694 2477629 . - . ID=gene2423;Dbxref=EcoGene:EG13161,GeneID:948828;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;gene_synonym=ECK2360,JW2361;locus_tag=b2364 NC_000913.3 RefSeq CDS 2476694 2477629 . - 0 ID=cds2348;Parent=gene2423;Dbxref=ASAP:ABE-0007797,UniProtKB/Swiss-Prot:P46068,Genbank:NP_416865.1,EcoGene:EG13161,GeneID:948828;Name=NP_416865.1;Note=D-serine dehydratase (deaminase) transcriptional activator;gbkey=CDS;gene=dsdC;product=dsd operon activator%3B autorepressor;protein_id=NP_416865.1;transl_table=11 NC_000913.3 RefSeq gene 2477847 2479184 . + . ID=gene2424;Dbxref=EcoGene:EG10250,GeneID:949103;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;gene_synonym=dsdC,ECK2361,JW2362,yfdA,yfdD;locus_tag=b2365 NC_000913.3 RefSeq CDS 2477847 2479184 . + 0 ID=cds2349;Parent=gene2424;Dbxref=ASAP:ABE-0007801,UniProtKB/Swiss-Prot:P08555,Genbank:NP_416866.1,EcoGene:EG10250,GeneID:949103;Name=NP_416866.1;gbkey=CDS;gene=dsdX;product=D-serine transporter;protein_id=NP_416866.1;transl_table=11 NC_000913.3 RefSeq gene 2479202 2480530 . + . ID=gene2425;Dbxref=EcoGene:EG10249,GeneID:946837;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;gene_synonym=ECK2362,JW2363;locus_tag=b2366 NC_000913.3 RefSeq CDS 2479202 2480530 . + 0 ID=cds2350;Parent=gene2425;Dbxref=ASAP:ABE-0007804,UniProtKB/Swiss-Prot:P00926,Genbank:NP_416867.1,EcoGene:EG10249,GeneID:946837;Name=NP_416867.1;Note=D-serine dehydratase (deaminase);gbkey=CDS;gene=dsdA;product=D-serine dehydratase;protein_id=NP_416867.1;transl_table=11 NC_000913.3 RefSeq gene 2480638 2482176 . - . ID=gene2426;Dbxref=EcoGene:EG13283,GeneID:946835;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;gene_synonym=ECK2363,JW2364;locus_tag=b2367 NC_000913.3 RefSeq CDS 2480638 2482176 . - 0 ID=cds2351;Parent=gene2426;Dbxref=ASAP:ABE-0007806,UniProtKB/Swiss-Prot:P52600,Genbank:NP_416868.1,EcoGene:EG13283,GeneID:946835;Name=NP_416868.1;Note=multidrug resistance protein Y;gbkey=CDS;gene=emrY;product=putative multidrug efflux system;protein_id=NP_416868.1;transl_table=11 NC_000913.3 RefSeq gene 2482176 2483339 . - . ID=gene2427;Dbxref=EcoGene:EG13282,GeneID:946840;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;gene_synonym=ECK2364,JW2365;locus_tag=b2368 NC_000913.3 RefSeq CDS 2482176 2483339 . - 0 ID=cds2352;Parent=gene2427;Dbxref=ASAP:ABE-0007808,UniProtKB/Swiss-Prot:P52599,Genbank:NP_416869.1,EcoGene:EG13282,GeneID:946840;Name=NP_416869.1;Note=multidrug resistance protein K;gbkey=CDS;gene=emrK;product=multidrug resistance efflux pump membrane fusion protein;protein_id=NP_416869.1;transl_table=11 NC_000913.3 RefSeq gene 2483755 2484369 . + . ID=gene2428;Dbxref=EcoGene:EG11609,GeneID:946841;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;gene_synonym=ECK2365,JW2366;locus_tag=b2369 NC_000913.3 RefSeq CDS 2483755 2484369 . + 0 ID=cds2353;Parent=gene2428;Dbxref=ASAP:ABE-0007817,UniProtKB/Swiss-Prot:P0ACZ4,Genbank:NP_416870.1,EcoGene:EG11609,GeneID:946841;Name=NP_416870.1;Note=putative positive transcription regulator (sensor EvgS);gbkey=CDS;gene=evgA;product=response regulator in two-component regulatory system with EvgS;protein_id=NP_416870.1;transl_table=11 NC_000913.3 RefSeq gene 2484374 2487967 . + . ID=gene2429;Dbxref=EcoGene:EG11610,GeneID:946844;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;gene_synonym=ECK2366,JW2367;locus_tag=b2370 NC_000913.3 RefSeq CDS 2484374 2487967 . + 0 ID=cds2354;Parent=gene2429;Dbxref=ASAP:ABE-0007819,UniProtKB/Swiss-Prot:P30855,Genbank:NP_416871.1,EcoGene:EG11610,GeneID:946844;Name=NP_416871.1;Note=putative sensor for regulator EvgA;gbkey=CDS;gene=evgS;product=hybrid sensory histidine kinase in two-component regulatory system with EvgA;protein_id=NP_416871.1;transl_table=11 NC_000913.3 RefSeq gene 2488023 2489168 . - . ID=gene2430;Dbxref=EcoGene:EG13284,GeneID:946432;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;gene_synonym=ECK2367,JW2368;locus_tag=b2371 NC_000913.3 RefSeq CDS 2488023 2489168 . - 0 ID=cds2355;Parent=gene2430;Dbxref=ASAP:ABE-0007821,UniProtKB/Swiss-Prot:P76518,Genbank:NP_416872.4,EcoGene:EG13284,GeneID:946432;Name=NP_416872.4;Note=putative enzyme;gbkey=CDS;gene=yfdE;product=acetyl-CoA:oxalate CoA-transferase;protein_id=NP_416872.4;transl_table=11 NC_000913.3 RefSeq gene 2489242 2490186 . - . ID=gene2431;Dbxref=EcoGene:EG14144,GeneID:949110;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;gene_synonym=ECK2368,JW2369;locus_tag=b2372 NC_000913.3 RefSeq CDS 2489242 2490186 . - 0 ID=cds2356;Parent=gene2431;Dbxref=ASAP:ABE-0007824,UniProtKB/Swiss-Prot:P0AA49,Genbank:NP_416873.1,EcoGene:EG14144,GeneID:949110;Name=NP_416873.1;Note=putative receptor protein;gbkey=CDS;gene=yfdV;product=putative transporter;protein_id=NP_416873.1;transl_table=11 NC_000913.3 RefSeq gene 2490256 2491950 . - . ID=gene2432;Dbxref=EcoGene:EG14143,GeneID:946845;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;gene_synonym=ECK2369,JW2370,yfdU;locus_tag=b2373 NC_000913.3 RefSeq CDS 2490256 2491950 . - 0 ID=cds2357;Parent=gene2432;Dbxref=ASAP:ABE-0007826,UniProtKB/Swiss-Prot:P0AFI0,Genbank:NP_416874.1,EcoGene:EG14143,GeneID:946845;Name=NP_416874.1;gbkey=CDS;gene=oxc;product=oxalyl CoA decarboxylase%2C ThDP-dependent;protein_id=NP_416874.1;transl_table=11 NC_000913.3 RefSeq gene 2492004 2493254 . - . ID=gene2433;Dbxref=EcoGene:EG14145,GeneID:946842;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;gene_synonym=ECK2370,JW2371,yfdW;locus_tag=b2374 NC_000913.3 RefSeq CDS 2492004 2493254 . - 0 ID=cds2358;Parent=gene2433;Dbxref=ASAP:ABE-0007828,UniProtKB/Swiss-Prot:P69902,Genbank:NP_416875.1,EcoGene:EG14145,GeneID:946842;Name=NP_416875.1;Note=putative enzyme;gbkey=CDS;gene=frc;product=formyl-CoA transferase%2C NAD(P)-binding;protein_id=NP_416875.1;transl_table=11 NC_000913.3 RefSeq gene 2493767 2494402 . - . ID=gene2434;Dbxref=EcoGene:EG14146,GeneID:949108;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;gene_synonym=ECK2371,JW2372;locus_tag=b2375 NC_000913.3 RefSeq CDS 2493767 2494402 . - 0 ID=cds2359;Parent=gene2434;Dbxref=ASAP:ABE-0007835,UniProtKB/Swiss-Prot:P76520,Genbank:NP_416876.1,EcoGene:EG14146,GeneID:949108;Name=NP_416876.1;gbkey=CDS;gene=yfdX;product=uncharacterized protein;protein_id=NP_416876.1;transl_table=11 NC_000913.3 RefSeq gene 2494698 2494973 . + . ID=gene2435;Dbxref=EcoGene:EG14376,GeneID:949107;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;gene_synonym=ECK2372,JW2373;locus_tag=b2376 NC_000913.3 RefSeq CDS 2494698 2494973 . + 0 ID=cds2360;Parent=gene2435;Dbxref=ASAP:ABE-0007839,UniProtKB/Swiss-Prot:O32528,Genbank:NP_416877.1,EcoGene:EG14376,GeneID:949107;Name=NP_416877.1;gbkey=CDS;gene=ypdI;product=putative lipoprotein involved in colanic acid biosynthesis;protein_id=NP_416877.1;transl_table=11 NC_000913.3 RefSeq gene 2495050 2495292 . - . ID=gene2436;Dbxref=EcoGene:EG14147,GeneID:948842;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;gene_synonym=ECK2373,JW2374;locus_tag=b2377 NC_000913.3 RefSeq CDS 2495050 2495292 . - 0 ID=cds2361;Parent=gene2436;Dbxref=ASAP:ABE-0007841,UniProtKB/Swiss-Prot:P76521,Genbank:NP_416878.1,EcoGene:EG14147,GeneID:948842;Name=NP_416878.1;gbkey=CDS;gene=yfdY;product=DUF2545 family putative inner membrane protein;protein_id=NP_416878.1;transl_table=11 NC_000913.3 RefSeq gene 2495645 2496565 . + . ID=gene2437;Dbxref=EcoGene:EG12901,GeneID:946847;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;gene_synonym=ddg,ECK2374,JW2375;locus_tag=b2378 NC_000913.3 RefSeq CDS 2495645 2496565 . + 0 ID=cds2362;Parent=gene2437;Dbxref=ASAP:ABE-0007848,UniProtKB/Swiss-Prot:P0ACV2,Genbank:NP_416879.4,EcoGene:EG12901,GeneID:946847;Name=NP_416879.4;Note=putative heat shock protein;gbkey=CDS;gene=lpxP;product=palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase;protein_id=NP_416879.4;transl_table=11 NC_000913.3 RefSeq gene 2496921 2496992 . + . ID=gene2438;Dbxref=EcoGene:EG14485,GeneID:7751622;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;gene_synonym=ECK4495;locus_tag=b4680 NC_000913.3 RefSeq CDS 2496921 2496992 . + 0 ID=cds2363;Parent=gene2438;Dbxref=UniProtKB/Swiss-Prot:C1P610,Genbank:YP_002791250.1,EcoGene:EG14485,GeneID:7751622;Name=YP_002791250.1;gbkey=CDS;gene=ypdK;product=inner membrane protein;protein_id=YP_002791250.1;transl_table=11 NC_000913.3 RefSeq gene 2497057 2498295 . - . ID=gene2439;Dbxref=EcoGene:EG14198,GeneID:946850;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;gene_synonym=ECK2375,JW2376,yfdZ;locus_tag=b2379 NC_000913.3 RefSeq CDS 2497057 2498295 . - 0 ID=cds2364;Parent=gene2439;Dbxref=ASAP:ABE-0007850,UniProtKB/Swiss-Prot:P77434,Genbank:NP_416880.1,EcoGene:EG14198,GeneID:946850;Name=NP_416880.1;Note=putative aminotransferase;gbkey=CDS;gene=alaC;product=glutamate-pyruvate aminotransferase%3B glutamic-pyruvic transaminase (GPT)%3B alanine transaminase;protein_id=NP_416880.1;transl_table=11 NC_000913.3 RefSeq gene 2498671 2500368 . + . ID=gene2440;Dbxref=EcoGene:EG14148,GeneID:946723;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;gene_synonym=ECK2376,JW5388;locus_tag=b2380 NC_000913.3 RefSeq CDS 2498671 2500368 . + 0 ID=cds2365;Parent=gene2440;Dbxref=ASAP:ABE-0007855,UniProtKB/Swiss-Prot:P0AA93,Genbank:NP_416881.1,EcoGene:EG14148,GeneID:946723;Name=NP_416881.1;Note=putative sensor protein;gbkey=CDS;gene=ypdA;product=sensor kinase regulating yhjX%3B pyruvate-responsive YpdAB two-component system;protein_id=NP_416881.1;transl_table=11 NC_000913.3 RefSeq gene 2500383 2501117 . + . ID=gene2441;Dbxref=EcoGene:EG14149,GeneID:947395;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;gene_synonym=ECK2377,JW2378;locus_tag=b2381 NC_000913.3 RefSeq CDS 2500383 2501117 . + 0 ID=cds2366;Parent=gene2441;Dbxref=ASAP:ABE-0007857,UniProtKB/Swiss-Prot:P0AE39,Genbank:NP_416882.1,EcoGene:EG14149,GeneID:947395;Name=NP_416882.1;Note=putative 2-component transcriptional regulator;gbkey=CDS;gene=ypdB;product=response regulator activating yhjX%3B pyruvate-responsive YpdAB two-component system;protein_id=NP_416882.1;transl_table=11 NC_000913.3 RefSeq gene 2501130 2501987 . + . ID=gene2442;Dbxref=EcoGene:EG14150,GeneID:946856;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;gene_synonym=ECK2378,JW2379;locus_tag=b2382 NC_000913.3 RefSeq CDS 2501130 2501987 . + 0 ID=cds2367;Parent=gene2442;Dbxref=ASAP:ABE-0007859,UniProtKB/Swiss-Prot:P77396,Genbank:NP_416883.1,EcoGene:EG14150,GeneID:946856;Name=NP_416883.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=ypdC;product=putative DNA-binding protein;protein_id=NP_416883.1;transl_table=11 NC_000913.3 RefSeq gene 2501990 2504485 . - . ID=gene2443;Dbxref=EcoGene:EG14151,GeneID:946852;Name=fryA;gbkey=Gene;gene=fryA;gene_biotype=protein_coding;gene_synonym=ECK2379,JW2380,ypdD;locus_tag=b2383 NC_000913.3 RefSeq CDS 2501990 2504485 . - 0 ID=cds2368;Parent=gene2443;Dbxref=ASAP:ABE-0007861,UniProtKB/Swiss-Prot:P77439,Genbank:NP_416884.1,EcoGene:EG14151,GeneID:946852;Name=NP_416884.1;Note=putative PTS system enzyme IIA component%2C enzyme I;gbkey=CDS;gene=fryA;product=putative PTS enzyme: Hpr%2C enzyme I and IIA components;protein_id=NP_416884.1;transl_table=11 NC_000913.3 RefSeq gene 2504510 2505547 . - . ID=gene2444;Dbxref=EcoGene:EG14152,GeneID:946848;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;gene_synonym=ECK2380,JW2381;locus_tag=b2384 NC_000913.3 RefSeq CDS 2504510 2505547 . - 0 ID=cds2369;Parent=gene2444;Dbxref=ASAP:ABE-0007864,UniProtKB/Swiss-Prot:P77585,Genbank:NP_416885.1,EcoGene:EG14152,GeneID:946848;Name=NP_416885.1;gbkey=CDS;gene=ypdE;product=aminopeptidase;protein_id=NP_416885.1;transl_table=11 NC_000913.3 RefSeq gene 2505547 2506632 . - . ID=gene2445;Dbxref=EcoGene:EG14153,GeneID:946853;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;gene_synonym=ECK2381,JW2382;locus_tag=b2385 NC_000913.3 RefSeq CDS 2505547 2506632 . - 0 ID=cds2370;Parent=gene2445;Dbxref=ASAP:ABE-0007869,UniProtKB/Swiss-Prot:P76524,Genbank:NP_416886.1,EcoGene:EG14153,GeneID:946853;Name=NP_416886.1;Note=putative peptidase;gbkey=CDS;gene=ypdF;product=Xaa-Pro aminopeptidase;protein_id=NP_416886.1;transl_table=11 NC_000913.3 RefSeq gene 2506647 2507894 . - . ID=gene2446;Dbxref=EcoGene:EG14154,GeneID:949111;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;gene_synonym=ECK2382,JW2383,ypdG;locus_tag=b2386 NC_000913.3 RefSeq CDS 2506647 2507894 . - 0 ID=cds2371;Parent=gene2446;Dbxref=ASAP:ABE-0007871,UniProtKB/Swiss-Prot:P77579,Genbank:NP_416887.1,EcoGene:EG14154,GeneID:949111;Name=NP_416887.1;gbkey=CDS;gene=fryC;product=putative enzyme IIC component of PTS;protein_id=NP_416887.1;transl_table=11 NC_000913.3 RefSeq gene 2507916 2508242 . - . ID=gene2447;Dbxref=EcoGene:EG14155,GeneID:949087;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;gene_synonym=ECK2383,JW5389,ypdH;locus_tag=b2387 NC_000913.3 RefSeq CDS 2507916 2508242 . - 0 ID=cds2372;Parent=gene2447;Dbxref=ASAP:ABE-0007873,UniProtKB/Swiss-Prot:P69808,Genbank:NP_416888.1,EcoGene:EG14155,GeneID:949087;Name=NP_416888.1;Note=putative PTS system enzyme IIB component;gbkey=CDS;gene=fryB;product=putative enzyme IIB component of PTS;protein_id=NP_416888.1;transl_table=11 NC_000913.3 RefSeq gene 2508461 2509426 . - . ID=gene2448;Dbxref=EcoGene:EG12957,GeneID:946858;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;gene_synonym=ECK2384,JW2385;locus_tag=b2388 NC_000913.3 RefSeq CDS 2508461 2509426 . - 0 ID=cds2373;Parent=gene2448;Dbxref=ASAP:ABE-0007875,UniProtKB/Swiss-Prot:P0A6V8,Genbank:NP_416889.1,EcoGene:EG12957,GeneID:946858;Name=NP_416889.1;gbkey=CDS;gene=glk;product=glucokinase;protein_id=NP_416889.1;transl_table=11 NC_000913.3 RefSeq gene 2509630 2510886 . + . ID=gene2449;Dbxref=EcoGene:EG14156,GeneID:946854;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;gene_synonym=ECK2385,JW2386;locus_tag=b2389 NC_000913.3 RefSeq CDS 2509630 2510886 . + 0 ID=cds2374;Parent=gene2449;Dbxref=ASAP:ABE-0007880,UniProtKB/Swiss-Prot:P67729,Genbank:NP_416890.1,EcoGene:EG14156,GeneID:946854;Name=NP_416890.1;gbkey=CDS;gene=yfeO;product=putative ion channel protein;protein_id=NP_416890.1;transl_table=11 NC_000913.3 RefSeq gene 2511001 2511327 . + . ID=gene2450;Dbxref=EcoGene:EG14385,GeneID:946855;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;gene_synonym=ECK2386,JW2387;locus_tag=b2390 NC_000913.3 RefSeq CDS 2511001 2511327 . + 0 ID=cds2375;Parent=gene2450;Dbxref=ASAP:ABE-0007883,UniProtKB/Swiss-Prot:P64542,Genbank:NP_416891.1,EcoGene:EG14385,GeneID:946855;Name=NP_416891.1;Note=the overlapping reading frame (b2391) is no longer thought to be an actual gene%2C and has been deaccessioned;gbkey=CDS;gene=ypeC;product=DUF2502 family putative periplasmic protein;protein_id=NP_416891.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2511352 2511439 . + . ID=id288;Note=REP172 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2511468 2512706 . - . ID=gene2451;Dbxref=EcoGene:EG14157,GeneID:946899;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;gene_synonym=ECK2387,JW2388,mntA,yfeP;locus_tag=b2392 NC_000913.3 RefSeq CDS 2511468 2512706 . - 0 ID=cds2376;Parent=gene2451;Dbxref=ASAP:ABE-0007889,UniProtKB/Swiss-Prot:P0A769,Genbank:NP_416893.1,EcoGene:EG14157,GeneID:946899;Name=NP_416893.1;gbkey=CDS;gene=mntH;product=manganese/divalent cation transporter;protein_id=NP_416893.1;transl_table=11 NC_000913.3 RefSeq gene 2513042 2514244 . + . ID=gene2452;Dbxref=EcoGene:EG11971,GeneID:946895;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;gene_synonym=cru,ECK2388,JW2389;locus_tag=b2393 NC_000913.3 RefSeq CDS 2513042 2514244 . + 0 ID=cds2377;Parent=gene2452;Dbxref=ASAP:ABE-0007893,UniProtKB/Swiss-Prot:P0AFF2,Genbank:NP_416894.1,EcoGene:EG11971,GeneID:946895;Name=NP_416894.1;Note=permease of transport system for 3 nucleosides;gbkey=CDS;gene=nupC;product=nucleoside (except guanosine) transporter;protein_id=NP_416894.1;transl_table=11 NC_000913.3 RefSeq region 2514273 2515617 . + . ID=id289;gbkey=mobile_element NC_000913.3 RefSeq gene 2514331 2515443 . + . ID=gene2453;Dbxref=EcoGene:EG40012,GeneID:946896;Name=insL1;gbkey=Gene;gene=insL1;gene_biotype=protein_coding;gene_synonym=ECK0016;locus_tag=b2394 NC_000913.3 RefSeq CDS 2514331 2515443 . + 0 ID=cds2378;Parent=gene2453;Dbxref=ASAP:ABE-0007897,UniProtKB/Swiss-Prot:P0CF93,Genbank:NP_416895.2,EcoGene:EG40012,GeneID:946896;Name=NP_416895.2;gbkey=CDS;gene=insL1;product=IS186 transposase;protein_id=NP_416895.2;transl_table=11 NC_000913.3 RefSeq gene 2515643 2517832 . - . ID=gene2454;Dbxref=EcoGene:EG11145,GeneID:946864;Name=yfeA;gbkey=Gene;gene=yfeA;gene_biotype=protein_coding;gene_synonym=ECK2389,JW5391;locus_tag=b2395 NC_000913.3 RefSeq CDS 2515643 2517832 . - 0 ID=cds2379;Parent=gene2454;Dbxref=ASAP:ABE-0007899,UniProtKB/Swiss-Prot:P23842,Genbank:NP_416896.4,EcoGene:EG11145,GeneID:946864;Name=NP_416896.4;gbkey=CDS;gene=yfeA;product=putative diguanylate cyclase;protein_id=NP_416896.4;transl_table=11 NC_000913.3 RefSeq gene 2518041 2518116 . - . ID=gene2455;Dbxref=EcoGene:EG30012,GeneID:946859;Name=alaX;gbkey=Gene;gene=alaX;gene_biotype=tRNA;gene_synonym=alaWbeta,ECK2390,JWR0046;locus_tag=b2396 NC_000913.3 RefSeq tRNA 2518041 2518116 . - . ID=rna74;Parent=gene2455;Dbxref=ASAP:ABE-0007902,EcoGene:EG30012,GeneID:946859;Note=anticodon: GGC;gbkey=tRNA;gene=alaX;product=tRNA-Ala NC_000913.3 RefSeq exon 2518041 2518116 . - . ID=id290;Parent=rna74;Dbxref=ASAP:ABE-0007902,EcoGene:EG30012,GeneID:946859;Note=anticodon: GGC;gbkey=tRNA;gene=alaX;product=tRNA-Ala NC_000913.3 RefSeq gene 2518156 2518231 . - . ID=gene2456;Dbxref=EcoGene:EG30011,GeneID:946860;Name=alaW;gbkey=Gene;gene=alaW;gene_biotype=tRNA;gene_synonym=alaWalpha,ECK2391,JWR0045;locus_tag=b2397 NC_000913.3 RefSeq tRNA 2518156 2518231 . - . ID=rna75;Parent=gene2456;Dbxref=ASAP:ABE-0007904,EcoGene:EG30011,GeneID:946860;Note=anticodon: GGC;gbkey=tRNA;gene=alaW;product=tRNA-Ala NC_000913.3 RefSeq exon 2518156 2518231 . - . ID=id291;Parent=rna75;Dbxref=ASAP:ABE-0007904,EcoGene:EG30011,GeneID:946860;Note=anticodon: GGC;gbkey=tRNA;gene=alaW;product=tRNA-Ala NC_000913.3 RefSeq gene 2518467 2518811 . + . ID=gene2457;Dbxref=EcoGene:EG11431,GeneID:946857;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;gene_synonym=ECK2392,JW2393;locus_tag=b2398 NC_000913.3 RefSeq CDS 2518467 2518811 . + 0 ID=cds2380;Parent=gene2457;Dbxref=ASAP:ABE-0007907,UniProtKB/Swiss-Prot:P0AD37,Genbank:NP_416897.2,EcoGene:EG11431,GeneID:946857;Name=NP_416897.2;gbkey=CDS;gene=yfeC;product=DUF1323 family putative DNA-binding protein;protein_id=NP_416897.2;transl_table=11 NC_000913.3 RefSeq gene 2518813 2519205 . + . ID=gene2458;Dbxref=EcoGene:EG11432,GeneID:946865;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;gene_synonym=ECK2393,JW2394;locus_tag=b2399 NC_000913.3 RefSeq CDS 2518813 2519205 . + 0 ID=cds2381;Parent=gene2458;Dbxref=ASAP:ABE-0007909,UniProtKB/Swiss-Prot:P27238,Genbank:NP_416898.3,EcoGene:EG11432,GeneID:946865;Name=NP_416898.3;gbkey=CDS;gene=yfeD;product=DUF1323 family putative DNA-binding protein;protein_id=NP_416898.3;transl_table=11 NC_000913.3 RefSeq gene 2519257 2520672 . - . ID=gene2459;Dbxref=EcoGene:EG10407,GeneID:946906;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;gene_synonym=ECK2394,JW2395;locus_tag=b2400 NC_000913.3 RefSeq CDS 2519257 2520672 . - 0 ID=cds2382;Parent=gene2459;Dbxref=ASAP:ABE-0007911,UniProtKB/Swiss-Prot:P04805,Genbank:NP_416899.1,EcoGene:EG10407,GeneID:946906;Name=NP_416899.1;Note=glutamate tRNA synthetase%2C catalytic subunit;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=NP_416899.1;transl_table=11 NC_000913.3 RefSeq gene 2520931 2521006 . + . ID=gene2460;Dbxref=EcoGene:EG30110,GeneID:946824;Name=valU;gbkey=Gene;gene=valU;gene_biotype=tRNA;gene_synonym=ECK2395,JWR0047,valUalpha;locus_tag=b2401 NC_000913.3 RefSeq tRNA 2520931 2521006 . + . ID=rna76;Parent=gene2460;Dbxref=ASAP:ABE-0007914,EcoGene:EG30110,GeneID:946824;Note=anticodon: UAC;gbkey=tRNA;gene=valU;product=tRNA-Val NC_000913.3 RefSeq exon 2520931 2521006 . + . ID=id292;Parent=rna76;Dbxref=ASAP:ABE-0007914,EcoGene:EG30110,GeneID:946824;Note=anticodon: UAC;gbkey=tRNA;gene=valU;product=tRNA-Val NC_000913.3 RefSeq gene 2521051 2521126 . + . ID=gene2461;Dbxref=EcoGene:EG30113,GeneID:946817;Name=valX;gbkey=Gene;gene=valX;gene_biotype=tRNA;gene_synonym=ECK2396,JWR0048,valUbeta;locus_tag=b2402 NC_000913.3 RefSeq tRNA 2521051 2521126 . + . ID=rna77;Parent=gene2461;Dbxref=ASAP:ABE-0007916,EcoGene:EG30113,GeneID:946817;Note=anticodon: UAC;gbkey=tRNA;gene=valX;product=tRNA-Val NC_000913.3 RefSeq exon 2521051 2521126 . + . ID=id293;Parent=rna77;Dbxref=ASAP:ABE-0007916,EcoGene:EG30113,GeneID:946817;Note=anticodon: UAC;gbkey=tRNA;gene=valX;product=tRNA-Val NC_000913.3 RefSeq gene 2521173 2521248 . + . ID=gene2462;Dbxref=EcoGene:EG30114,GeneID:946870;Name=valY;gbkey=Gene;gene=valY;gene_biotype=tRNA;gene_synonym=ECK2397,JWR0049,valUgamma;locus_tag=b2403 NC_000913.3 RefSeq tRNA 2521173 2521248 . + . ID=rna78;Parent=gene2462;Dbxref=ASAP:ABE-0007918,EcoGene:EG30114,GeneID:946870;Note=anticodon: UAC;gbkey=tRNA;gene=valY;product=tRNA-Val NC_000913.3 RefSeq exon 2521173 2521248 . + . ID=id294;Parent=rna78;Dbxref=ASAP:ABE-0007918,EcoGene:EG30114,GeneID:946870;Note=anticodon: UAC;gbkey=tRNA;gene=valY;product=tRNA-Val NC_000913.3 RefSeq gene 2521253 2521328 . + . ID=gene2463;Dbxref=EcoGene:EG30056,GeneID:946866;Name=lysV;gbkey=Gene;gene=lysV;gene_biotype=tRNA;gene_synonym=ECK2398,JWR0050,supN;locus_tag=b2404 NC_000913.3 RefSeq tRNA 2521253 2521328 . + . ID=rna79;Parent=gene2463;Dbxref=ASAP:ABE-0007920,EcoGene:EG30056,GeneID:946866;Note=anticodon: UUU;gbkey=tRNA;gene=lysV;product=tRNA-Lys NC_000913.3 RefSeq exon 2521253 2521328 . + . ID=id295;Parent=rna79;Dbxref=ASAP:ABE-0007920,EcoGene:EG30056,GeneID:946866;Note=anticodon: UUU;gbkey=tRNA;gene=lysV;product=tRNA-Lys NC_000913.3 RefSeq repeat_region 2521538 2521566 . + . ID=id296;Note=REP173 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2521593 2522477 . - . ID=gene2464;Dbxref=EcoGene:EG11146,GeneID:946862;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;gene_synonym=ECK2399,JW2396,pRndR,yfeB;locus_tag=b2405 NC_000913.3 RefSeq CDS 2521593 2522477 . - 0 ID=cds2383;Parent=gene2464;Dbxref=ASAP:ABE-0007922,UniProtKB/Swiss-Prot:P23841,Genbank:NP_416900.1,EcoGene:EG11146,GeneID:946862;Name=NP_416900.1;Note=regulator for xapA;gbkey=CDS;gene=xapR;product=transcriptional activator of xapAB;protein_id=NP_416900.1;transl_table=11 NC_000913.3 RefSeq gene 2522729 2523985 . - . ID=gene2465;Dbxref=EcoGene:EG13159,GeneID:946868;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;gene_synonym=ECK2400,JW2397;locus_tag=b2406 NC_000913.3 RefSeq CDS 2522729 2523985 . - 0 ID=cds2384;Parent=gene2465;Dbxref=ASAP:ABE-0007925,UniProtKB/Swiss-Prot:P45562,Genbank:NP_416901.1,EcoGene:EG13159,GeneID:946868;Name=NP_416901.1;Note=xanthosine permease;gbkey=CDS;gene=xapB;product=xanthosine transporter;protein_id=NP_416901.1;transl_table=11 NC_000913.3 RefSeq gene 2524045 2524878 . - . ID=gene2466;Dbxref=EcoGene:EG20250,GeneID:946878;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;gene_synonym=ECK2401,JW2398,pndA;locus_tag=b2407 NC_000913.3 RefSeq CDS 2524045 2524878 . - 0 ID=cds2385;Parent=gene2466;Dbxref=ASAP:ABE-0007927,UniProtKB/Swiss-Prot:P45563,Genbank:NP_416902.1,EcoGene:EG20250,GeneID:946878;Name=NP_416902.1;Note=xanthosine phosphorylase;gbkey=CDS;gene=xapA;product=purine nucleoside phosphorylase 2%3B nicotinamide 1-beta-D-riboside synthase;protein_id=NP_416902.1;transl_table=11 NC_000913.3 RefSeq gene 2525127 2525891 . + . ID=gene2467;Dbxref=EcoGene:EG13160,GeneID:946872;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;gene_synonym=ECK2402,JW2399;locus_tag=b2408 NC_000913.3 RefSeq CDS 2525127 2525891 . + 0 ID=cds2386;Parent=gene2467;Dbxref=ASAP:ABE-0007930,UniProtKB/Swiss-Prot:P45564,Genbank:NP_416903.1,EcoGene:EG13160,GeneID:946872;Name=NP_416903.1;Note=putative sugar hydrolase;gbkey=CDS;gene=yfeN;product=putative outer membrane protein;protein_id=NP_416903.1;transl_table=11 NC_000913.3 RefSeq gene 2525930 2526856 . - . ID=gene2468;Dbxref=EcoGene:EG14159,GeneID:946873;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;gene_synonym=ECK2403,JW2400,osmT;locus_tag=b2409 NC_000913.3 RefSeq CDS 2525930 2526856 . - 0 ID=cds2387;Parent=gene2468;Dbxref=ASAP:ABE-0007932,UniProtKB/Swiss-Prot:P0ACR7,Genbank:NP_416904.1,EcoGene:EG14159,GeneID:946873;Name=NP_416904.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yfeR;product=transcriptional regulator of yefH;protein_id=NP_416904.1;transl_table=11 NC_000913.3 RefSeq gene 2526946 2527944 . + . ID=gene2469;Dbxref=EcoGene:EG12376,GeneID:946874;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;gene_synonym=ECK2404,JW5876;locus_tag=b2410 NC_000913.3 RefSeq CDS 2526946 2527944 . + 0 ID=cds2388;Parent=gene2469;Dbxref=ASAP:ABE-0007936,UniProtKB/Swiss-Prot:P39836,Genbank:NP_416905.1,EcoGene:EG12376,GeneID:946874;Name=NP_416905.1;Note=putative cytochrome oxidase;gbkey=CDS;gene=yfeH;product=putative inorganic ion transporter;protein_id=NP_416905.1;transl_table=11 NC_000913.3 RefSeq gene 2527941 2528159 . - . ID=gene2470;Dbxref=EcoGene:EG14366,GeneID:1450285;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;gene_synonym=ECK2405,JW5877;locus_tag=b4546 NC_000913.3 RefSeq CDS 2527941 2528159 . - 0 ID=cds2389;Parent=gene2470;Dbxref=ASAP:ABE-0285067,UniProtKB/Swiss-Prot:P0AD40,Genbank:YP_588464.1,EcoGene:EG14366,GeneID:1450285;Name=YP_588464.1;gbkey=CDS;gene=ypeB;product=DUF3820 family protein;protein_id=YP_588464.1;transl_table=11 NC_000913.3 RefSeq gene 2528161 2530176 . - . ID=gene2471;Dbxref=EcoGene:EG10534,GeneID:946885;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;gene_synonym=dnaL,ECK2406,JW2403,lig,lop,pdeC;locus_tag=b2411 NC_000913.3 RefSeq CDS 2528161 2530176 . - 0 ID=cds2390;Parent=gene2471;Dbxref=ASAP:ABE-0007938,UniProtKB/Swiss-Prot:P15042,Genbank:NP_416906.1,EcoGene:EG10534,GeneID:946885;Name=NP_416906.1;Note=DNA ligase;gbkey=CDS;gene=ligA;product=DNA ligase%2C NAD(+)-dependent;protein_id=NP_416906.1;transl_table=11 NC_000913.3 RefSeq gene 2530247 2531233 . - . ID=gene2472;Dbxref=EcoGene:EG14169,GeneID:946869;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;gene_synonym=ECK2407,JW2404;locus_tag=b2412 NC_000913.3 RefSeq CDS 2530247 2531233 . - 0 ID=cds2391;Parent=gene2472;Dbxref=ASAP:ABE-0007942,UniProtKB/Swiss-Prot:P77173,Genbank:NP_416907.1,EcoGene:EG14169,GeneID:946869;Name=NP_416907.1;Note=cell division protein involved in FtsZ ring;gbkey=CDS;gene=zipA;product=FtsZ stabilizer;protein_id=NP_416907.1;transl_table=11 NC_000913.3 RefSeq gene 2531463 2532224 . + . ID=gene2473;Dbxref=EcoGene:EG10003,GeneID:946875;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;gene_synonym=ECK2408,JW2406;locus_tag=b2413 NC_000913.3 RefSeq CDS 2531463 2532224 . + 0 ID=cds2392;Parent=gene2473;Dbxref=ASAP:ABE-0007953,UniProtKB/Swiss-Prot:P0A6J3,Genbank:NP_416908.1,EcoGene:EG10003,GeneID:946875;Name=NP_416908.1;Note=required for sulfate transport;gbkey=CDS;gene=cysZ;product=sulfate transporter%2C sulfite inhibited;protein_id=NP_416908.1;transl_table=11 NC_000913.3 RefSeq gene 2532409 2533380 . + . ID=gene2474;Dbxref=EcoGene:EG10192,GeneID:946877;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;gene_synonym=cysZ,ECK2409,JW2407;locus_tag=b2414 NC_000913.3 RefSeq CDS 2532409 2533380 . + 0 ID=cds2393;Parent=gene2474;Dbxref=ASAP:ABE-0007957,UniProtKB/Swiss-Prot:P0ABK5,Genbank:NP_416909.1,EcoGene:EG10192,GeneID:946877;Name=NP_416909.1;Note=cysteine synthase A%2C O-acetylserine sulfhydrolase A;gbkey=CDS;gene=cysK;product=cysteine synthase A%2C O-acetylserine sulfhydrolase A subunit;protein_id=NP_416909.1;transl_table=11 NC_000913.3 RefSeq gene 2533764 2534021 . + . ID=gene2475;Dbxref=EcoGene:EG10788,GeneID:946886;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;gene_synonym=ctr,ECK2410,hpr,iex?,JW2408;locus_tag=b2415 NC_000913.3 RefSeq CDS 2533764 2534021 . + 0 ID=cds2394;Parent=gene2475;Dbxref=ASAP:ABE-0007962,UniProtKB/Swiss-Prot:P0AA04,Genbank:NP_416910.1,EcoGene:EG10788,GeneID:946886;Name=NP_416910.1;Note=PTS system protein HPr;gbkey=CDS;gene=ptsH;product=phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr);protein_id=NP_416910.1;transl_table=11 NC_000913.3 RefSeq gene 2534066 2535793 . + . ID=gene2476;Dbxref=EcoGene:EG10789,GeneID:946879;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;gene_synonym=ctr,ECK2411,JW2409;locus_tag=b2416 NC_000913.3 RefSeq CDS 2534066 2535793 . + 0 ID=cds2395;Parent=gene2476;Dbxref=ASAP:ABE-0007967,UniProtKB/Swiss-Prot:P08839,Genbank:NP_416911.1,EcoGene:EG10789,GeneID:946879;Name=NP_416911.1;Note=PEP-protein phosphotransferase system enzyme I;gbkey=CDS;gene=ptsI;product=PEP-protein phosphotransferase of PTS system (enzyme I);protein_id=NP_416911.1;transl_table=11 NC_000913.3 RefSeq gene 2535834 2536343 . + . ID=gene2477;Dbxref=EcoGene:EG10165,GeneID:946880;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;gene_synonym=ECK2412,gsr,iex,JW2410,tgs,treD;locus_tag=b2417 NC_000913.3 RefSeq CDS 2535834 2536343 . + 0 ID=cds2396;Parent=gene2477;Dbxref=ASAP:ABE-0007971,UniProtKB/Swiss-Prot:P69783,Genbank:NP_416912.1,EcoGene:EG10165,GeneID:946880;Name=NP_416912.1;Note=PTS system%2C glucose-specific IIA component;gbkey=CDS;gene=crr;product=glucose-specific enzyme IIA component of PTS;protein_id=NP_416912.1;transl_table=11 NC_000913.3 RefSeq gene 2536386 2537237 . - . ID=gene2478;Dbxref=EcoGene:EG12642,GeneID:946881;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=ECK2413,JW2411,pdxL,thiJ,yfeI;locus_tag=b2418 NC_000913.3 RefSeq CDS 2536386 2537237 . - 0 ID=cds2397;Parent=gene2478;Dbxref=ASAP:ABE-0007973,UniProtKB/Swiss-Prot:P40191,Genbank:NP_416913.1,EcoGene:EG12642,GeneID:946881;Name=NP_416913.1;Note=pyridoxal/pyridoxine/pyridoxamine kinase;gbkey=CDS;gene=pdxK;product=pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase;protein_id=NP_416913.1;transl_table=11 NC_000913.3 RefSeq gene 2537342 2537716 . + . ID=gene2479;Dbxref=EcoGene:EG12644,GeneID:946876;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;gene_synonym=ECK2414,JW2412;locus_tag=b2419 NC_000913.3 RefSeq CDS 2537342 2537716 . + 0 ID=cds2398;Parent=gene2479;Dbxref=ASAP:ABE-0007977,UniProtKB/Swiss-Prot:Q47702,Genbank:NP_416914.1,EcoGene:EG12644,GeneID:946876;Name=NP_416914.1;gbkey=CDS;gene=yfeK;product=uncharacterized protein;protein_id=NP_416914.1;transl_table=11 NC_000913.3 RefSeq gene 2537749 2538483 . + . ID=gene2480;Dbxref=EcoGene:EG14160,GeneID:946887;Name=yfeS;gbkey=Gene;gene=yfeS;gene_biotype=protein_coding;gene_synonym=ECK2415,JW2413;locus_tag=b2420 NC_000913.3 RefSeq CDS 2537749 2538483 . + 0 ID=cds2399;Parent=gene2480;Dbxref=ASAP:ABE-0007979,UniProtKB/Swiss-Prot:P78271,Genbank:NP_416915.1,EcoGene:EG14160,GeneID:946887;Name=NP_416915.1;gbkey=CDS;gene=yfeS;product=WGR domain protein;protein_id=NP_416915.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2538535 2538632 . + . ID=id297;Note=RIP174 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2538672 2539583 . - . ID=gene2481;Dbxref=EcoGene:EG10193,GeneID:946888;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;gene_synonym=ECK2416,JW2414;locus_tag=b2421 NC_000913.3 RefSeq CDS 2538672 2539583 . - 0 ID=cds2400;Parent=gene2481;Dbxref=ASAP:ABE-0007982,UniProtKB/Swiss-Prot:P16703,Genbank:NP_416916.1,EcoGene:EG10193,GeneID:946888;Name=NP_416916.1;Note=cysteine synthase B%2C O-acetylserine sulfhydrolase B;gbkey=CDS;gene=cysM;product=cysteine synthase B (O-acetylserine sulfhydrolase B);protein_id=NP_416916.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2539607 2539642 . + . ID=id298;Note=REP175 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2539717 2540814 . - . ID=gene2482;Dbxref=EcoGene:EG10183,GeneID:946889;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;gene_synonym=ECK2417,JW2415;locus_tag=b2422 NC_000913.3 RefSeq CDS 2539717 2540814 . - 0 ID=cds2401;Parent=gene2482;Dbxref=ASAP:ABE-0007986,UniProtKB/Swiss-Prot:P16676,Genbank:NP_416917.1,EcoGene:EG10183,GeneID:946889;Name=NP_416917.1;Note=ATP-binding component of sulfate permease A protein%3B chromate resistance%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=cysA;product=sulfate/thiosulfate transporter subunit;protein_id=NP_416917.1;transl_table=11 NC_000913.3 RefSeq gene 2540804 2541679 . - . ID=gene2483;Dbxref=EcoGene:EG10198,GeneID:2847743;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;gene_synonym=ECK2418,JW2416;locus_tag=b2423 NC_000913.3 RefSeq CDS 2540804 2541679 . - 0 ID=cds2402;Parent=gene2483;Dbxref=ASAP:ABE-0007988,UniProtKB/Swiss-Prot:P0AEB0,Genbank:YP_026168.2,EcoGene:EG10198,GeneID:2847743;Name=YP_026168.2;Note=sulfate transport system permease W protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate ABC transporter permease;protein_id=YP_026168.2;transl_table=11 NC_000913.3 RefSeq gene 2541679 2542512 . - . ID=gene2484;Dbxref=EcoGene:EG10197,GeneID:946882;Name=cysU;gbkey=Gene;gene=cysU;gene_biotype=protein_coding;gene_synonym=cysT,ECK2419,JW2417;locus_tag=b2424 NC_000913.3 RefSeq CDS 2541679 2542512 . - 0 ID=cds2403;Parent=gene2484;Dbxref=ASAP:ABE-0007990,UniProtKB/Swiss-Prot:P16701,Genbank:NP_416919.1,EcoGene:EG10197,GeneID:946882;Name=NP_416919.1;Note=sulfate%2C thiosulfate transport system permease T protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=cysU;product=sulfate/thiosulfate ABC transporter permease;protein_id=NP_416919.1;transl_table=11 NC_000913.3 RefSeq gene 2542512 2543528 . - . ID=gene2485;Dbxref=EcoGene:EG10195,GeneID:946883;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;gene_synonym=ECK2420,JW2418;locus_tag=b2425 NC_000913.3 RefSeq CDS 2542512 2543528 . - 0 ID=cds2404;Parent=gene2485;Dbxref=ASAP:ABE-0007992,UniProtKB/Swiss-Prot:P16700,Genbank:NP_416920.1,EcoGene:EG10195,GeneID:946883;Name=NP_416920.1;Note=thiosulfate binding protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=cysP;product=thiosulfate-binding protein;protein_id=NP_416920.1;transl_table=11 NC_000913.3 RefSeq gene 2543832 2544623 . - . ID=gene2486;Dbxref=EcoGene:EG12133,GeneID:946898;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;gene_synonym=ECK2421,JW5394,yfeF;locus_tag=b2426 NC_000913.3 RefSeq CDS 2543832 2544623 . - 0 ID=cds2405;Parent=gene2486;Dbxref=ASAP:ABE-0007996,UniProtKB/Swiss-Prot:P37440,Genbank:NP_416921.4,EcoGene:EG12133,GeneID:946898;Name=NP_416921.4;Note=putative oxidoreductase;gbkey=CDS;gene=ucpA;product=furfural resistance protein%2C putative short-chain oxidoreductase;protein_id=NP_416921.4;transl_table=11 NC_000913.3 RefSeq gene 2544752 2545609 . - . ID=gene2487;Dbxref=EcoGene:EG14161,GeneID:946568;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;gene_synonym=ECK2422,JW2420,yfeT;locus_tag=b2427 NC_000913.3 RefSeq CDS 2544752 2545609 . - 0 ID=cds2406;Parent=gene2487;Dbxref=ASAP:ABE-0008000,UniProtKB/Swiss-Prot:P77245,Genbank:NP_416922.1,EcoGene:EG14161,GeneID:946568;Name=NP_416922.1;gbkey=CDS;gene=murR;product=repressor for murPQ%2C MurNAc 6-P inducible;protein_id=NP_416922.1;transl_table=11 NC_000913.3 RefSeq gene 2545773 2546669 . + . ID=gene2488;Dbxref=EcoGene:EG14162,GeneID:946893;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=ECK2423,JW2421,yfeU;locus_tag=b2428 NC_000913.3 RefSeq CDS 2545773 2546669 . + 0 ID=cds2407;Parent=gene2488;Dbxref=ASAP:ABE-0008007,UniProtKB/Swiss-Prot:P76535,Genbank:NP_416923.1,EcoGene:EG14162,GeneID:946893;Name=NP_416923.1;Note=putative regulator;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase;protein_id=NP_416923.1;transl_table=11 NC_000913.3 RefSeq gene 2546673 2548097 . + . ID=gene2489;Dbxref=EcoGene:EG14163,GeneID:946894;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;gene_synonym=ECK2424,JW2422,yfeV;locus_tag=b2429 NC_000913.3 RefSeq CDS 2546673 2548097 . + 0 ID=cds2408;Parent=gene2489;Dbxref=ASAP:ABE-0008009,UniProtKB/Swiss-Prot:P77272,Genbank:NP_416924.1,EcoGene:EG14163,GeneID:946894;Name=NP_416924.1;gbkey=CDS;gene=murP;product=N-acetylmuramic acid permease%2C EIIBC component%2C PTS system;protein_id=NP_416924.1;transl_table=11 NC_000913.3 RefSeq gene 2548102 2549406 . + . ID=gene2490;Dbxref=EcoGene:EG14164,GeneID:946907;Name=yfeW;gbkey=Gene;gene=yfeW;gene_biotype=protein_coding;gene_synonym=ECK2425,JW5395,pbp4B;locus_tag=b2430 NC_000913.3 RefSeq CDS 2548102 2549406 . + 0 ID=cds2409;Parent=gene2490;Dbxref=ASAP:ABE-0008012,UniProtKB/Swiss-Prot:P77619,Genbank:NP_416925.2,EcoGene:EG14164,GeneID:946907;Name=NP_416925.2;Note=putative beta-lactamase;gbkey=CDS;gene=yfeW;product=penicillin binding protein PBP4B%3B weak DD-carboxypeptidase activity;protein_id=NP_416925.2;transl_table=11 NC_000913.3 RefSeq repeat_region 2549466 2549563 . + . ID=id299;Note=RIP176 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2549646 2550545 . - . ID=gene2491;Dbxref=EcoGene:EG14165,GeneID:946913;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;gene_synonym=ECK2426,JW2424;locus_tag=b2431 NC_000913.3 RefSeq CDS 2549646 2550545 . - 0 ID=cds2410;Parent=gene2491;Dbxref=ASAP:ABE-0008015,UniProtKB/Swiss-Prot:P76536,Genbank:NP_416926.4,EcoGene:EG14165,GeneID:946913;Name=NP_416926.4;gbkey=CDS;gene=yfeX;product=porphyrinogen oxidase%2C cytoplasmic;protein_id=NP_416926.4;transl_table=11 NC_000913.3 RefSeq gene 2550641 2551216 . - . ID=gene2492;Dbxref=EcoGene:EG14166,GeneID:946919;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;gene_synonym=ECK2427,JW2425;locus_tag=b2432 NC_000913.3 RefSeq CDS 2550641 2551216 . - 0 ID=cds2411;Parent=gene2492;Dbxref=ASAP:ABE-0008017,UniProtKB/Swiss-Prot:P76537,Genbank:NP_416927.1,EcoGene:EG14166,GeneID:946919;Name=NP_416927.1;gbkey=CDS;gene=yfeY;product=RpoE-regulated lipoprotein;protein_id=NP_416927.1;transl_table=11 NC_000913.3 RefSeq gene 2551277 2551726 . - . ID=gene2493;Dbxref=EcoGene:EG14167,GeneID:946918;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;gene_synonym=ECK2428,JW2426;locus_tag=b2433 NC_000913.3 RefSeq CDS 2551277 2551726 . - 0 ID=cds2412;Parent=gene2493;Dbxref=ASAP:ABE-0008023,UniProtKB/Swiss-Prot:P76538,Genbank:NP_416928.4,EcoGene:EG14167,GeneID:946918;Name=NP_416928.4;gbkey=CDS;gene=yfeZ;product=inner membrane protein;protein_id=NP_416928.4;transl_table=11 NC_000913.3 RefSeq gene 2551713 2552138 . - . ID=gene2494;Dbxref=EcoGene:EG14168,GeneID:946917;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;gene_synonym=ECK2429,JW2427;locus_tag=b2434 NC_000913.3 RefSeq CDS 2551713 2552138 . - 0 ID=cds2413;Parent=gene2494;Dbxref=ASAP:ABE-0008028,UniProtKB/Swiss-Prot:P76539,Genbank:NP_416929.4,EcoGene:EG14168,GeneID:946917;Name=NP_416929.4;gbkey=CDS;gene=ypeA;product=GNAT family putative N-acetyltransferase;protein_id=NP_416929.4;transl_table=11 NC_000913.3 RefSeq gene 2552352 2553221 . + . ID=gene2495;Dbxref=EcoGene:EG11823,GeneID:946916;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;gene_synonym=ECK2430,JW2428,yfeE;locus_tag=b2435 NC_000913.3 RefSeq CDS 2552352 2553221 . + 0 ID=cds2414;Parent=gene2495;Dbxref=ASAP:ABE-0008032,UniProtKB/Swiss-Prot:P36548,Genbank:NP_416930.1,EcoGene:EG11823,GeneID:946916;Name=NP_416930.1;gbkey=CDS;gene=amiA;product=N-acetylmuramoyl-l-alanine amidase I;protein_id=NP_416930.1;transl_table=11 NC_000913.3 RefSeq gene 2553225 2554124 . + . ID=gene2496;Dbxref=EcoGene:EG12189,GeneID:946908;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;gene_synonym=ECK2431,JW2429,popB,sec;locus_tag=b2436 NC_000913.3 RefSeq CDS 2553225 2554124 . + 0 ID=cds2415;Parent=gene2496;Dbxref=ASAP:ABE-0008034,UniProtKB/Swiss-Prot:P36553,Genbank:NP_416931.1,EcoGene:EG12189,GeneID:946908;Name=NP_416931.1;gbkey=CDS;gene=hemF;product=coproporphyrinogen III oxidase;protein_id=NP_416931.1;transl_table=11 NC_000913.3 RefSeq gene 2554130 2555182 . - . ID=gene2497;Dbxref=EcoGene:EG12190,GeneID:946911;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;gene_synonym=ECK2432,JW2430,yfeG;locus_tag=b2437 NC_000913.3 RefSeq CDS 2554130 2555182 . - 0 ID=cds2416;Parent=gene2497;Dbxref=ASAP:ABE-0008036,UniProtKB/Swiss-Prot:P36547,Genbank:NP_416932.1,EcoGene:EG12190,GeneID:946911;Name=NP_416932.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=eutR;product=eut operon transcriptional activator%2C AraC family;protein_id=NP_416932.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2555192 2555215 . + . ID=id300;Note=REP177 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2555228 2555728 . - . ID=gene2498;Dbxref=EcoGene:EG14170,GeneID:946912;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;gene_synonym=ECK2433,JW2431,yffI;locus_tag=b2438 NC_000913.3 RefSeq CDS 2555228 2555728 . - 0 ID=cds2417;Parent=gene2498;Dbxref=ASAP:ABE-0008039,UniProtKB/Swiss-Prot:P76540,Genbank:NP_416933.4,EcoGene:EG14170,GeneID:946912;Name=NP_416933.4;gbkey=CDS;gene=eutK;product=putative ethanol utilization carboxysome structural protein;protein_id=NP_416933.4;transl_table=11 NC_000913.3 RefSeq gene 2555741 2556400 . - . ID=gene2499;Dbxref=EcoGene:EG14171,GeneID:946914;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;gene_synonym=ECK2434,JW2432,yffJ;locus_tag=b2439 NC_000913.3 RefSeq CDS 2555741 2556400 . - 0 ID=cds2418;Parent=gene2499;Dbxref=ASAP:ABE-0008041,UniProtKB/Swiss-Prot:P76541,Genbank:NP_416934.1,EcoGene:EG14171,GeneID:946914;Name=NP_416934.1;gbkey=CDS;gene=eutL;product=putative ethanol utilization carboxysome structural protein;protein_id=NP_416934.1;transl_table=11 NC_000913.3 RefSeq gene 2556410 2557297 . - . ID=gene2500;Dbxref=EcoGene:EG50007,GeneID:946925;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;gene_synonym=ECK2435,JW2433;locus_tag=b2440 NC_000913.3 RefSeq CDS 2556410 2557297 . - 0 ID=cds2419;Parent=gene2500;Dbxref=ASAP:ABE-0008043,UniProtKB/Swiss-Prot:P19636,Genbank:NP_416935.1,EcoGene:EG50007,GeneID:946925;Name=NP_416935.1;Note=ethanolamine ammonia-lyase%2C light chain;gbkey=CDS;gene=eutC;product=ethanolamine ammonia-lyase%2C small subunit (light chain);protein_id=NP_416935.1;transl_table=11 NC_000913.3 RefSeq gene 2557318 2558679 . - . ID=gene2501;Dbxref=EcoGene:EG50006,GeneID:946924;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;gene_synonym=ECK2436,JW2434;locus_tag=b2441 NC_000913.3 RefSeq CDS 2557318 2558679 . - 0 ID=cds2420;Parent=gene2501;Dbxref=ASAP:ABE-0008046,UniProtKB/Swiss-Prot:P0AEJ6,Genbank:NP_416936.4,EcoGene:EG50006,GeneID:946924;Name=NP_416936.4;Note=ethanolamine ammonia-lyase%2C heavy chain;gbkey=CDS;gene=eutB;product=ethanolamine ammonia-lyase%2C large subunit%2C heavy chain;protein_id=NP_416936.4;transl_table=11 NC_000913.3 RefSeq region 2558699 2565461 . + . ID=id301;Note=cryptic prophage Eut/CPZ-55;gbkey=misc_feature NC_000913.3 RefSeq gene 2558858 2560066 . + . ID=gene2502;Dbxref=EcoGene:EG14172,GeneID:946923;Name=intZ;gbkey=Gene;gene=intZ;gene_biotype=protein_coding;gene_synonym=ECK2437;locus_tag=b2442 NC_000913.3 RefSeq CDS 2558858 2560066 . + 0 ID=cds2421;Parent=gene2502;Dbxref=ASAP:ABE-0008052,UniProtKB/Swiss-Prot:P76542,Genbank:NP_416937.2,EcoGene:EG14172,GeneID:946923;Name=NP_416937.2;Note=putative prophage integrase;gbkey=CDS;gene=intZ;product=CPZ-55 prophage%3B putative phage integrase;protein_id=NP_416937.2;transl_table=11 NC_000913.3 RefSeq gene 2560257 2560898 . + . ID=gene2503;Dbxref=EcoGene:EG14173,GeneID:946922;Name=yffL;gbkey=Gene;gene=yffL;gene_biotype=protein_coding;gene_synonym=ECK2438;locus_tag=b2443 NC_000913.3 RefSeq CDS 2560257 2560898 . + 0 ID=cds2422;Parent=gene2503;Dbxref=ASAP:ABE-0008055,UniProtKB/Swiss-Prot:P76543,Genbank:NP_416938.1,EcoGene:EG14173,GeneID:946922;Name=NP_416938.1;gbkey=CDS;gene=yffL;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416938.1;transl_table=11 NC_000913.3 RefSeq gene 2561368 2561613 . + . ID=gene2504;Dbxref=EcoGene:EG14174,GeneID:946921;Name=yffM;gbkey=Gene;gene=yffM;gene_biotype=protein_coding;gene_synonym=ECK2439;locus_tag=b2444 NC_000913.3 RefSeq CDS 2561368 2561613 . + 0 ID=cds2423;Parent=gene2504;Dbxref=ASAP:ABE-0008061,UniProtKB/Swiss-Prot:P76544,Genbank:NP_416939.1,EcoGene:EG14174,GeneID:946921;Name=NP_416939.1;gbkey=CDS;gene=yffM;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416939.1;transl_table=11 NC_000913.3 RefSeq gene 2561625 2561993 . + . ID=gene2505;Dbxref=EcoGene:EG14175,GeneID:946930;Name=yffN;gbkey=Gene;gene=yffN;gene_biotype=protein_coding;gene_synonym=ECK2440;locus_tag=b2445 NC_000913.3 RefSeq CDS 2561625 2561993 . + 0 ID=cds2424;Parent=gene2505;Dbxref=ASAP:ABE-0008063,UniProtKB/Swiss-Prot:P76545,Genbank:NP_416940.2,EcoGene:EG14175,GeneID:946930;Name=NP_416940.2;gbkey=CDS;gene=yffN;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416940.2;transl_table=11 NC_000913.3 RefSeq gene 2562111 2562527 . + . ID=gene2506;Dbxref=EcoGene:EG14176,GeneID:946929;Name=yffO;gbkey=Gene;gene=yffO;gene_biotype=protein_coding;gene_synonym=ECK2441;locus_tag=b2446 NC_000913.3 RefSeq CDS 2562111 2562527 . + 0 ID=cds2425;Parent=gene2506;Dbxref=ASAP:ABE-0008066,UniProtKB/Swiss-Prot:P76546,Genbank:NP_416941.1,EcoGene:EG14176,GeneID:946929;Name=NP_416941.1;gbkey=CDS;gene=yffO;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416941.1;transl_table=11 NC_000913.3 RefSeq gene 2562524 2563117 . + . ID=gene2507;Dbxref=EcoGene:EG14177,GeneID:946928;Name=yffP;gbkey=Gene;gene=yffP;gene_biotype=protein_coding;gene_synonym=ECK2442;locus_tag=b2447 NC_000913.3 RefSeq CDS 2562524 2563117 . + 0 ID=cds2426;Parent=gene2507;Dbxref=ASAP:ABE-0008069,UniProtKB/Swiss-Prot:P76547,Genbank:NP_416942.1,EcoGene:EG14177,GeneID:946928;Name=NP_416942.1;gbkey=CDS;gene=yffP;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416942.1;transl_table=11 NC_000913.3 RefSeq gene 2563592 2563969 . + . ID=gene2508;Dbxref=EcoGene:EG14178,GeneID:946927;Name=yffQ;gbkey=Gene;gene=yffQ;gene_biotype=protein_coding;gene_synonym=ECK2443;locus_tag=b2448 NC_000913.3 RefSeq CDS 2563592 2563969 . + 0 ID=cds2427;Parent=gene2508;Dbxref=ASAP:ABE-0008072,UniProtKB/Swiss-Prot:P76548,Genbank:NP_416943.2,EcoGene:EG14178,GeneID:946927;Name=NP_416943.2;gbkey=CDS;gene=yffQ;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416943.2;transl_table=11 NC_000913.3 RefSeq gene 2563980 2564372 . + . ID=gene2509;Dbxref=EcoGene:EG14179,GeneID:946931;Name=yffR;gbkey=Gene;gene=yffR;gene_biotype=protein_coding;gene_synonym=ECK2444;locus_tag=b2449 NC_000913.3 RefSeq CDS 2563980 2564372 . + 0 ID=cds2428;Parent=gene2509;Dbxref=ASAP:ABE-0008074,UniProtKB/Swiss-Prot:P76549,Genbank:NP_416944.1,EcoGene:EG14179,GeneID:946931;Name=NP_416944.1;gbkey=CDS;gene=yffR;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416944.1;transl_table=11 NC_000913.3 RefSeq gene 2564523 2565332 . + . ID=gene2510;Dbxref=EcoGene:EG14180,GeneID:946932;Name=yffS;gbkey=Gene;gene=yffS;gene_biotype=protein_coding;gene_synonym=ECK2445;locus_tag=b2450 NC_000913.3 RefSeq CDS 2564523 2565332 . + 0 ID=cds2429;Parent=gene2510;Dbxref=ASAP:ABE-0008077,UniProtKB/Swiss-Prot:P76550,Genbank:NP_416945.2,EcoGene:EG14180,GeneID:946932;Name=NP_416945.2;gbkey=CDS;gene=yffS;product=CPZ-55 prophage%3B uncharacterized protein;protein_id=NP_416945.2;transl_table=11 NC_000913.3 RefSeq gene 2565481 2566884 . - . ID=gene2511;Dbxref=EcoGene:EG14181,GeneID:946937;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;gene_synonym=ECK2446,JW2435,yffT;locus_tag=b2451 NC_000913.3 RefSeq CDS 2565481 2566884 . - 0 ID=cds2430;Parent=gene2511;Dbxref=ASAP:ABE-0008079,UniProtKB/Swiss-Prot:P76551,Genbank:NP_416946.1,EcoGene:EG14181,GeneID:946937;Name=NP_416946.1;gbkey=CDS;gene=eutA;product=reactivating factor for ethanolamine ammonia lyase;protein_id=NP_416946.1;transl_table=11 NC_000913.3 RefSeq gene 2566881 2568107 . - . ID=gene2512;Dbxref=EcoGene:EG14182,GeneID:944979;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;gene_synonym=ECK2447,JW2436,yffU;locus_tag=b2452 NC_000913.3 RefSeq CDS 2566881 2568107 . - 0 ID=cds2431;Parent=gene2512;Dbxref=ASAP:ABE-0008081,UniProtKB/Swiss-Prot:P76552,Genbank:NP_416947.1,EcoGene:EG14182,GeneID:944979;Name=NP_416947.1;Note=ethanolamine utilization%3B homolog of Salmonella putative transport protein;gbkey=CDS;gene=eutH;product=ethanolamine transporter;protein_id=NP_416947.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2568139 2568321 . + . ID=id302;Note=REP178 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2568324 2569511 . - . ID=gene2513;Dbxref=EcoGene:EG14183,GeneID:946233;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;gene_synonym=ECK2448,JW2437,yffV;locus_tag=b2453 NC_000913.3 RefSeq CDS 2568324 2569511 . - 0 ID=cds2432;Parent=gene2513;Dbxref=ASAP:ABE-0008087,UniProtKB/Swiss-Prot:P76553,Genbank:NP_416948.4,EcoGene:EG14183,GeneID:946233;Name=NP_416948.4;Note=ethanolamine utilization%3B homolog of Salmonella enzyme%2C similar to iron-containing alcohol dehydrogenase;gbkey=CDS;gene=eutG;product=ethanol dehydrogenase involved in ethanolamine utilization%3B aldehyde reductase;protein_id=NP_416948.4;transl_table=11 NC_000913.3 RefSeq gene 2569501 2570337 . - . ID=gene2514;Dbxref=EcoGene:EG14184,GeneID:947588;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;gene_synonym=ECK2449,JW2438,yffW;locus_tag=b2454 NC_000913.3 RefSeq CDS 2569501 2570337 . - 0 ID=cds2433;Parent=gene2514;Dbxref=ASAP:ABE-0008089,UniProtKB/Swiss-Prot:P77277,Genbank:NP_416949.1,EcoGene:EG14184,GeneID:947588;Name=NP_416949.1;Note=ethanolamine utilization%3B homolog of Salmonella gene;gbkey=CDS;gene=eutJ;product=ethanolamine utilization protein%2C HSP70/actin superfamily protein;protein_id=NP_416949.1;transl_table=11 NC_000913.3 RefSeq gene 2570348 2571751 . - . ID=gene2515;Dbxref=EcoGene:EG14185,GeneID:946943;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;gene_synonym=ECK2450,JW2439,yffX;locus_tag=b2455 NC_000913.3 RefSeq CDS 2570348 2571751 . - 0 ID=cds2434;Parent=gene2515;Dbxref=ASAP:ABE-0008091,UniProtKB/Swiss-Prot:P77445,Genbank:NP_416950.1,EcoGene:EG14185,GeneID:946943;Name=NP_416950.1;Note=ethanolamine utilization%3B similar to acetaldehyde dehydrogenase;gbkey=CDS;gene=eutE;product=aldehyde oxidoreductase%2C ethanolamine utilization protein;protein_id=NP_416950.1;transl_table=11 NC_000913.3 RefSeq gene 2571763 2572050 . - . ID=gene2516;Dbxref=EcoGene:EG14186,GeneID:946945;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;gene_synonym=cchB,ECK2451,JW2440,yffY;locus_tag=b2456 NC_000913.3 RefSeq CDS 2571763 2572050 . - 0 ID=cds2435;Parent=gene2516;Dbxref=ASAP:ABE-0008093,UniProtKB/Swiss-Prot:P0AEJ8,Genbank:NP_416951.1,EcoGene:EG14186,GeneID:946945;Name=NP_416951.1;Note=detox protein;gbkey=CDS;gene=eutN;product=Ethanolamine catabolic microcompartment shell protein;protein_id=NP_416951.1;transl_table=11 NC_000913.3 RefSeq gene 2572157 2572450 . - . ID=gene2517;Dbxref=EcoGene:EG14187,GeneID:946942;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;gene_synonym=cchA,ECK2452,JW2441,yffZ;locus_tag=b2457 NC_000913.3 RefSeq CDS 2572157 2572450 . - 0 ID=cds2436;Parent=gene2517;Dbxref=ASAP:ABE-0008095,UniProtKB/Swiss-Prot:P0ABF4,Genbank:NP_416952.2,EcoGene:EG14187,GeneID:946942;Name=NP_416952.2;Note=detox protein;gbkey=CDS;gene=eutM;product=ethanolamine utilization protein%2C putative carboxysome structural protein;protein_id=NP_416952.2;transl_table=11 NC_000913.3 RefSeq gene 2572489 2573505 . - . ID=gene2518;Dbxref=EcoGene:EG14188,GeneID:946940;Name=eutD;gbkey=Gene;gene=eutD;gene_biotype=protein_coding;gene_synonym=ECK2453,eutI,JW2442,ypfA;locus_tag=b2458 NC_000913.3 RefSeq CDS 2572489 2573505 . - 0 ID=cds2437;Parent=gene2518;Dbxref=ASAP:ABE-0008097,UniProtKB/Swiss-Prot:P77218,Genbank:NP_416953.1,EcoGene:EG14188,GeneID:946940;Name=NP_416953.1;Note=ethanolamine utilization%3B homolog of Salmonella acetyl/butyryl P transferase;gbkey=CDS;gene=eutD;product=phosphate acetyltransferase;protein_id=NP_416953.1;transl_table=11 NC_000913.3 RefSeq gene 2573502 2574305 . - . ID=gene2519;Dbxref=EcoGene:EG14189,GeneID:946939;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;gene_synonym=ECK2454,JW2443,ypfB;locus_tag=b2459 NC_000913.3 RefSeq CDS 2573502 2574305 . - 0 ID=cds2438;Parent=gene2519;Dbxref=ASAP:ABE-0008100,UniProtKB/Swiss-Prot:P65643,Genbank:NP_416954.1,EcoGene:EG14189,GeneID:946939;Name=NP_416954.1;gbkey=CDS;gene=eutT;product=cobalamin adenosyltransferase involved in ethanolamine utilization;protein_id=NP_416954.1;transl_table=11 NC_000913.3 RefSeq gene 2574302 2575003 . - . ID=gene2520;Dbxref=EcoGene:EG14190,GeneID:946935;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;gene_synonym=ECK2455,JW2444,ypfC;locus_tag=b2460 NC_000913.3 RefSeq CDS 2574302 2575003 . - 0 ID=cds2439;Parent=gene2520;Dbxref=ASAP:ABE-0008102,UniProtKB/Swiss-Prot:P76555,Genbank:NP_416955.1,EcoGene:EG14190,GeneID:946935;Name=NP_416955.1;gbkey=CDS;gene=eutQ;product=RmlC-like cupin domain protein;protein_id=NP_416955.1;transl_table=11 NC_000913.3 RefSeq gene 2574978 2575457 . - . ID=gene2521;Dbxref=EcoGene:EG14191,GeneID:946933;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;gene_synonym=ECK2456,JW2445,ypfD;locus_tag=b2461 NC_000913.3 RefSeq CDS 2574978 2575457 . - 0 ID=cds2440;Parent=gene2521;Dbxref=ASAP:ABE-0008105,UniProtKB/Swiss-Prot:P76556,Genbank:NP_416956.1,EcoGene:EG14191,GeneID:946933;Name=NP_416956.1;gbkey=CDS;gene=eutP;product=putative P-loop NTPase ethanolamine utilization protein;protein_id=NP_416956.1;transl_table=11 NC_000913.3 RefSeq gene 2575470 2575805 . - . ID=gene2522;Dbxref=EcoGene:EG14192,GeneID:946936;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;gene_synonym=ECK2457,JW2446,ypfE;locus_tag=b2462 NC_000913.3 RefSeq CDS 2575470 2575805 . - 0 ID=cds2441;Parent=gene2522;Dbxref=ASAP:ABE-0008108,UniProtKB/Swiss-Prot:P63746,Genbank:NP_416957.4,EcoGene:EG14192,GeneID:946936;Name=NP_416957.4;gbkey=CDS;gene=eutS;product=putative ethanol utilization carboxysome structural protein;protein_id=NP_416957.4;transl_table=11 NC_000913.3 RefSeq gene 2576098 2578377 . - . ID=gene2523;Dbxref=EcoGene:EG14193,GeneID:946947;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;gene_synonym=ECK2458,JW2447,ypfF;locus_tag=b2463 NC_000913.3 RefSeq CDS 2576098 2578377 . - 0 ID=cds2442;Parent=gene2523;Dbxref=ASAP:ABE-0008111,UniProtKB/Swiss-Prot:P76558,Genbank:NP_416958.1,EcoGene:EG14193,GeneID:946947;Name=NP_416958.1;Note=putative multimodular enzyme;gbkey=CDS;gene=maeB;product=malic enzyme: putative oxidoreductase/phosphotransacetylase;protein_id=NP_416958.1;transl_table=11 NC_000913.3 RefSeq gene 2578666 2579616 . + . ID=gene2524;Dbxref=EcoGene:EG11797,GeneID:947006;Name=talA;gbkey=Gene;gene=talA;gene_biotype=protein_coding;gene_synonym=ECK2459,JW2448;locus_tag=b2464 NC_000913.3 RefSeq CDS 2578666 2579616 . + 0 ID=cds2443;Parent=gene2524;Dbxref=ASAP:ABE-0008115,UniProtKB/Swiss-Prot:P0A867,Genbank:NP_416959.1,EcoGene:EG11797,GeneID:947006;Name=NP_416959.1;gbkey=CDS;gene=talA;product=transaldolase A;protein_id=NP_416959.1;transl_table=11 NC_000913.3 RefSeq gene 2579636 2581639 . + . ID=gene2525;Dbxref=EcoGene:EG12100,GeneID:945865;Name=tktB;gbkey=Gene;gene=tktB;gene_biotype=protein_coding;gene_synonym=ECK2460,JW2449;locus_tag=b2465 NC_000913.3 RefSeq CDS 2579636 2581639 . + 0 ID=cds2444;Parent=gene2525;Dbxref=ASAP:ABE-0008117,UniProtKB/Swiss-Prot:P33570,Genbank:NP_416960.1,EcoGene:EG12100,GeneID:945865;Name=NP_416960.1;Note=transketolase 2 isozyme;gbkey=CDS;gene=tktB;product=transketolase 2%2C thiamine triphosphate-binding;protein_id=NP_416960.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2581648 2581716 . + . ID=id303;Note=REP179 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2581734 2582777 . - . ID=gene2526;Dbxref=EcoGene:EG14194,GeneID:946828;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;gene_synonym=ECK2461,JW2450;locus_tag=b2466 NC_000913.3 RefSeq CDS 2581734 2582777 . - 0 ID=cds2445;Parent=gene2526;Dbxref=ASAP:ABE-0008120,UniProtKB/Swiss-Prot:P76559,Genbank:NP_416961.1,EcoGene:EG14194,GeneID:946828;Name=NP_416961.1;gbkey=CDS;gene=ypfG;product=DUF1176 family protein;protein_id=NP_416961.1;transl_table=11 NC_000913.3 RefSeq gene 2582903 2583478 . - . ID=gene2527;Dbxref=EcoGene:EG12410,GeneID:947072;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;gene_synonym=ECK2462,JW2451,yffH;locus_tag=b2467 NC_000913.3 RefSeq CDS 2582903 2583478 . - 0 ID=cds2446;Parent=gene2527;Dbxref=ASAP:ABE-0008123,UniProtKB/Swiss-Prot:P37128,Genbank:NP_416962.1,EcoGene:EG12410,GeneID:947072;Name=NP_416962.1;gbkey=CDS;gene=nudK;product=GDP-mannose pyrophosphatase;protein_id=NP_416962.1;transl_table=11 NC_000913.3 RefSeq gene 2583546 2585525 . - . ID=gene2528;Dbxref=EcoGene:EG12409,GeneID:947383;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;gene_synonym=ECK2463,JW2452,yffG;locus_tag=b2468 NC_000913.3 RefSeq CDS 2583546 2585525 . - 0 ID=cds2447;Parent=gene2528;Dbxref=ASAP:ABE-0008127,UniProtKB/Swiss-Prot:P37127,Genbank:NP_416963.1,EcoGene:EG12409,GeneID:947383;Name=NP_416963.1;gbkey=CDS;gene=aegA;product=putative oxidoreductase%2C FeS binding subunit/NAD/FAD-binding subunit;protein_id=NP_416963.1;transl_table=11 NC_000913.3 RefSeq gene 2585731 2587431 . + . ID=gene2529;Dbxref=EcoGene:EG11460,GeneID:946948;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;gene_synonym=ECK2464,JW2453;locus_tag=b2469 NC_000913.3 RefSeq CDS 2585731 2587431 . + 0 ID=cds2448;Parent=gene2529;Dbxref=ASAP:ABE-0008132,UniProtKB/Swiss-Prot:P27896,Genbank:NP_416964.1,EcoGene:EG11460,GeneID:946948;Name=NP_416964.1;Note=sensor for nitrate reductase system%2C protein histidine kinase (acts on NarP and narL);gbkey=CDS;gene=narQ;product=sensory histidine kinase in two-component regulatory system with NarP;protein_id=NP_416964.1;transl_table=11 NC_000913.3 RefSeq gene 2587595 2590708 . + . ID=gene2530;Dbxref=EcoGene:EG10014,GeneID:945464;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;gene_synonym=ECK2465,JW2454,yffA;locus_tag=b2470 NC_000913.3 RefSeq CDS 2587595 2590708 . + 0 ID=cds2449;Parent=gene2530;Dbxref=ASAP:ABE-0008136,UniProtKB/Swiss-Prot:P24177,Genbank:NP_416965.1,EcoGene:EG10014,GeneID:945464;Name=NP_416965.1;gbkey=CDS;gene=acrD;product=aminoglycoside/multidrug efflux system;protein_id=NP_416965.1;transl_table=11 NC_000913.3 RefSeq gene 2590807 2590866 . - . ID=gene2531;Dbxref=EcoGene:EG14396,GeneID:5061513;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;gene_synonym=ECK4415;locus_tag=b4606 NC_000913.3 RefSeq CDS 2590807 2590866 . - 0 ID=cds2450;Parent=gene2531;Dbxref=UniProtKB/Swiss-Prot:A5A621,Genbank:YP_001165325.1,EcoGene:EG14396,GeneID:5061513;Name=YP_001165325.1;gbkey=CDS;gene=ypfM;product=stress-induced small enterobacterial protein;protein_id=YP_001165325.1;transl_table=11 NC_000913.3 RefSeq gene 2591247 2591603 . + . ID=gene2532;Dbxref=EcoGene:EG11147,GeneID:946953;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;gene_synonym=ECK2466,JW2455;locus_tag=b2471 NC_000913.3 RefSeq CDS 2591247 2591603 . + 0 ID=cds2451;Parent=gene2532;Dbxref=ASAP:ABE-0008140,UniProtKB/Swiss-Prot:P24178,Genbank:NP_416966.1,EcoGene:EG11147,GeneID:946953;Name=NP_416966.1;gbkey=CDS;gene=yffB;product=putative ArsC family reductase;protein_id=NP_416966.1;transl_table=11 NC_000913.3 RefSeq gene 2591607 2592734 . + . ID=gene2533;Dbxref=EcoGene:EG10208,GeneID:948313;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;gene_synonym=ECK2467,JW2456,msgB;locus_tag=b2472 NC_000913.3 RefSeq CDS 2591607 2592734 . + 0 ID=cds2452;Parent=gene2533;Dbxref=ASAP:ABE-0008142,UniProtKB/Swiss-Prot:P0AED7,Genbank:NP_416967.1,EcoGene:EG10208,GeneID:948313;Name=NP_416967.1;gbkey=CDS;gene=dapE;product=N-succinyl-diaminopimelate deacylase;protein_id=NP_416967.1;transl_table=11 NC_000913.3 RefSeq gene 2592762 2592962 . + . ID=gene2534;Dbxref=EcoGene:EG14399,GeneID:1450286;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;gene_synonym=ECK2468,JW2457;locus_tag=b4547 NC_000913.3 RefSeq CDS 2592762 2592962 . + 0 ID=cds2453;Parent=gene2534;Dbxref=ASAP:ABE-0285068,UniProtKB/Swiss-Prot:Q2EET2,Genbank:YP_588465.1,EcoGene:EG14399,GeneID:1450286;Name=YP_588465.1;gbkey=CDS;gene=ypfN;product=putative membrane protein%2C UPF0370 family;protein_id=YP_588465.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2592978 2593060 . + . ID=id304;Note=REP180 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2593072 2593770 . - . ID=gene2535;Dbxref=EcoGene:EG14195,GeneID:947571;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;gene_synonym=ECK2469,JW5396;locus_tag=b2473 NC_000913.3 RefSeq CDS 2593072 2593770 . - 0 ID=cds2454;Parent=gene2535;Dbxref=ASAP:ABE-0008145,UniProtKB/Swiss-Prot:P76561,Genbank:NP_416968.2,EcoGene:EG14195,GeneID:947571;Name=NP_416968.2;gbkey=CDS;gene=ypfH;product=palmitoyl-CoA esterase activity%2C uncertain physiological substrate;protein_id=NP_416968.2;transl_table=11 NC_000913.3 RefSeq gene 2593844 2595859 . - . ID=gene2536;Dbxref=EcoGene:EG14196,GeneID:946053;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;gene_synonym=ECK2470,JW2459,ypfI;locus_tag=b2474 NC_000913.3 RefSeq CDS 2593844 2595859 . - 0 ID=cds2455;Parent=gene2536;Dbxref=ASAP:ABE-0008150,UniProtKB/Swiss-Prot:P76562,Genbank:NP_416969.1,EcoGene:EG14196,GeneID:946053;Name=NP_416969.1;gbkey=CDS;gene=tmcA;product=elongator methionine tRNA (ac4C34) acetyltransferase;protein_id=NP_416969.1;transl_table=11 NC_000913.3 RefSeq gene 2595874 2596737 . - . ID=gene2537;Dbxref=EcoGene:EG14197,GeneID:946956;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;gene_synonym=ECK2471,JW2460;locus_tag=b2475 NC_000913.3 RefSeq CDS 2595874 2596737 . - 0 ID=cds2456;Parent=gene2537;Dbxref=ASAP:ABE-0008153,UniProtKB/Swiss-Prot:P64429,Genbank:NP_416970.1,EcoGene:EG14197,GeneID:946956;Name=NP_416970.1;gbkey=CDS;gene=ypfJ;product=putative neutral zinc metallopeptidase;protein_id=NP_416970.1;transl_table=11 NC_000913.3 RefSeq gene 2596905 2597618 . - . ID=gene2538;Dbxref=EcoGene:EG10791,GeneID:946957;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;gene_synonym=ade,ECK2472,JW2461;locus_tag=b2476 NC_000913.3 RefSeq CDS 2596905 2597618 . - 0 ID=cds2457;Parent=gene2538;Dbxref=ASAP:ABE-0008156,UniProtKB/Swiss-Prot:P0A7D7,Genbank:NP_416971.1,EcoGene:EG10791,GeneID:946957;Name=NP_416971.1;Note=phosphoribosylaminoimidazole-succinocarboxamide synthetase %3D SAICAR synthetase;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazole-succinocarboxamide synthetase;protein_id=NP_416971.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2597673 2597718 . + . ID=id305;Note=REP181 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2597831 2598865 . - . ID=gene2539;Dbxref=EcoGene:EG10658,GeneID:946954;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;gene_synonym=dapX,ECK2473,JW2462,nlpB;locus_tag=b2477 NC_000913.3 RefSeq CDS 2597831 2598865 . - 0 ID=cds2458;Parent=gene2539;Dbxref=ASAP:ABE-0008161,UniProtKB/Swiss-Prot:P0A903,Genbank:NP_416972.4,EcoGene:EG10658,GeneID:946954;Name=NP_416972.4;Note=lipoprotein-34;gbkey=CDS;gene=bamC;product=BamABCDE complex OM biogenesis lipoprotein;protein_id=NP_416972.4;transl_table=11 NC_000913.3 RefSeq gene 2598882 2599760 . - . ID=gene2540;Dbxref=EcoGene:EG10205,GeneID:946952;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;gene_synonym=ECK2474,JW2463;locus_tag=b2478 NC_000913.3 RefSeq CDS 2598882 2599760 . - 0 ID=cds2459;Parent=gene2540;Dbxref=ASAP:ABE-0008163,UniProtKB/Swiss-Prot:P0A6L2,Genbank:NP_416973.1,EcoGene:EG10205,GeneID:946952;Name=NP_416973.1;gbkey=CDS;gene=dapA;product=dihydrodipicolinate synthase;protein_id=NP_416973.1;transl_table=11 NC_000913.3 RefSeq gene 2599906 2600478 . + . ID=gene2541;Dbxref=EcoGene:EG11149,GeneID:946950;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;gene_synonym=ECK2475,JW2464,yffD;locus_tag=b2479 NC_000913.3 RefSeq CDS 2599906 2600478 . + 0 ID=cds2460;Parent=gene2541;Dbxref=ASAP:ABE-0008168,UniProtKB/Swiss-Prot:P0A9I3,Genbank:NP_416974.4,EcoGene:EG11149,GeneID:946950;Name=NP_416974.4;Note=transcriptional regulation of gcv operon;gbkey=CDS;gene=gcvR;product=transcriptional repressor%2C regulatory protein accessory to GcvA;protein_id=NP_416974.4;transl_table=11 NC_000913.3 RefSeq gene 2600478 2600948 . + . ID=gene2542;Dbxref=EcoGene:EG10108,GeneID:946949;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;gene_synonym=ECK2476,JW2465;locus_tag=b2480 NC_000913.3 RefSeq CDS 2600478 2600948 . + 0 ID=cds2461;Parent=gene2542;Dbxref=ASAP:ABE-0008171,UniProtKB/Swiss-Prot:P0AE52,Genbank:NP_416975.1,EcoGene:EG10108,GeneID:946949;Name=NP_416975.1;Note=bacterioferritin comigratory protein;gbkey=CDS;gene=bcp;product=peroxiredoxin%3B thiol peroxidase%2C thioredoxin-dependent;protein_id=NP_416975.1;transl_table=11 NC_000913.3 RefSeq gene 2601201 2601818 . + . ID=gene2543;Dbxref=EcoGene:EG11150,GeneID:946959;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;gene_synonym=ECK2477,JW2466,yffE;locus_tag=b2481 NC_000913.3 RefSeq CDS 2601201 2601818 . + 0 ID=cds2462;Parent=gene2543;Dbxref=ASAP:ABE-0008179,UniProtKB/Swiss-Prot:P23481,Genbank:NP_416976.4,EcoGene:EG11150,GeneID:946959;Name=NP_416976.4;Note=hydrogenase 4 Fe-S subunit;gbkey=CDS;gene=hyfA;product=hydrogenase 4%2C 4Fe-4S subunit;protein_id=NP_416976.4;transl_table=11 NC_000913.3 RefSeq gene 2601818 2603836 . + . ID=gene2544;Dbxref=EcoGene:EG11282,GeneID:946961;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;gene_synonym=ECK2478,JW2467,yffF;locus_tag=b2482 NC_000913.3 RefSeq CDS 2601818 2603836 . + 0 ID=cds2463;Parent=gene2544;Dbxref=ASAP:ABE-0008181,UniProtKB/Swiss-Prot:P23482,Genbank:NP_416977.1,EcoGene:EG11282,GeneID:946961;Name=NP_416977.1;Note=hydrogenase 4 membrane subunit;gbkey=CDS;gene=hyfB;product=hydrogenase 4%2C membrane subunit;protein_id=NP_416977.1;transl_table=11 NC_000913.3 RefSeq gene 2603847 2604794 . + . ID=gene2545;Dbxref=EcoGene:EG14211,GeneID:947492;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;gene_synonym=ECK2479,JW2468;locus_tag=b2483 NC_000913.3 RefSeq CDS 2603847 2604794 . + 0 ID=cds2464;Parent=gene2545;Dbxref=ASAP:ABE-0008183,UniProtKB/Swiss-Prot:P77858,Genbank:NP_416978.4,EcoGene:EG14211,GeneID:947492;Name=NP_416978.4;Note=hydrogenase 4 membrane subunit;gbkey=CDS;gene=hyfC;product=hydrogenase 4%2C membrane subunit;protein_id=NP_416978.4;transl_table=11 NC_000913.3 RefSeq gene 2604811 2606250 . + . ID=gene2546;Dbxref=EcoGene:EG14212,GeneID:947290;Name=hyfD;gbkey=Gene;gene=hyfD;gene_biotype=protein_coding;gene_synonym=ECK2480,JW2469;locus_tag=b2484 NC_000913.3 RefSeq CDS 2604811 2606250 . + 0 ID=cds2465;Parent=gene2546;Dbxref=ASAP:ABE-0008185,UniProtKB/Swiss-Prot:P77416,Genbank:NP_416979.1,EcoGene:EG14212,GeneID:947290;Name=NP_416979.1;Note=hydrogenase 4 membrane subunit;gbkey=CDS;gene=hyfD;product=hydrogenase 4%2C membrane subunit;protein_id=NP_416979.1;transl_table=11 NC_000913.3 RefSeq gene 2606262 2606912 . + . ID=gene2547;Dbxref=EcoGene:EG14213,GeneID:945298;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;gene_synonym=ECK2481,JW2470;locus_tag=b2485 NC_000913.3 RefSeq CDS 2606262 2606912 . + 0 ID=cds2466;Parent=gene2547;Dbxref=ASAP:ABE-0008188,UniProtKB/Swiss-Prot:P0AEW1,Genbank:NP_416980.1,EcoGene:EG14213,GeneID:945298;Name=NP_416980.1;Note=hydrogenase 4 membrane subunit;gbkey=CDS;gene=hyfE;product=hydrogenase 4%2C membrane subunit;protein_id=NP_416980.1;transl_table=11 NC_000913.3 RefSeq gene 2606917 2608497 . + . ID=gene2548;Dbxref=EcoGene:EG14214,GeneID:946962;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;gene_synonym=ECK2482,JW2471;locus_tag=b2486 NC_000913.3 RefSeq CDS 2606917 2608497 . + 0 ID=cds2467;Parent=gene2548;Dbxref=ASAP:ABE-0008191,UniProtKB/Swiss-Prot:P77437,Genbank:NP_416981.1,EcoGene:EG14214,GeneID:946962;Name=NP_416981.1;Note=hydrogenase 4 membrane subunit;gbkey=CDS;gene=hyfF;product=hydrogenase 4%2C membrane subunit;protein_id=NP_416981.1;transl_table=11 NC_000913.3 RefSeq gene 2608487 2610154 . + . ID=gene2549;Dbxref=EcoGene:EG14215,GeneID:946964;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;gene_synonym=ECK2483,JW2472;locus_tag=b2487 NC_000913.3 RefSeq CDS 2608487 2610154 . + 0 ID=cds2468;Parent=gene2549;Dbxref=ASAP:ABE-0008194,UniProtKB/Swiss-Prot:P77329,Genbank:NP_416982.1,EcoGene:EG14215,GeneID:946964;Name=NP_416982.1;Note=hydrogenase 4 subunit;gbkey=CDS;gene=hyfG;product=hydrogenase 4%2C subunit;protein_id=NP_416982.1;transl_table=11 NC_000913.3 RefSeq gene 2610164 2610709 . + . ID=gene2550;Dbxref=EcoGene:EG14216,GeneID:946965;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;gene_synonym=ECK2484,JW2473;locus_tag=b2488 NC_000913.3 RefSeq CDS 2610164 2610709 . + 0 ID=cds2469;Parent=gene2550;Dbxref=ASAP:ABE-0008196,UniProtKB/Swiss-Prot:P77423,Genbank:NP_416983.1,EcoGene:EG14216,GeneID:946965;Name=NP_416983.1;Note=hydrogenase 4 Fe-S subunit;gbkey=CDS;gene=hyfH;product=hydrogenase 4%2C Fe-S subunit;protein_id=NP_416983.1;transl_table=11 NC_000913.3 RefSeq gene 2610706 2611464 . + . ID=gene2551;Dbxref=EcoGene:EG14217,GeneID:946966;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;gene_synonym=ECK2485,JW5805;locus_tag=b2489 NC_000913.3 RefSeq CDS 2610706 2611464 . + 0 ID=cds2470;Parent=gene2551;Dbxref=ASAP:ABE-0008198,UniProtKB/Swiss-Prot:P77668,Genbank:NP_416984.1,EcoGene:EG14217,GeneID:946966;Name=NP_416984.1;Note=hydrogenase 4 Fe-S subunit;gbkey=CDS;gene=hyfI;product=hydrogenase 4%2C Fe-S subunit;protein_id=NP_416984.1;transl_table=11 NC_000913.3 RefSeq gene 2611457 2611870 . + . ID=gene2552;Dbxref=EcoGene:EG14218,GeneID:947713;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;gene_synonym=ECK2486,JW2475;locus_tag=b2490 NC_000913.3 RefSeq CDS 2611457 2611870 . + 0 ID=cds2471;Parent=gene2552;Dbxref=ASAP:ABE-0008200,UniProtKB/Swiss-Prot:P77453,Genbank:NP_416985.4,EcoGene:EG14218,GeneID:947713;Name=NP_416985.4;gbkey=CDS;gene=hyfJ;product=putative processing element hydrogenase 4;protein_id=NP_416985.4;transl_table=11 NC_000913.3 RefSeq gene 2611900 2613912 . + . ID=gene2553;Dbxref=EcoGene:EG14219,GeneID:948886;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;gene_synonym=ECK2487,JW2476;locus_tag=b2491 NC_000913.3 RefSeq CDS 2611900 2613912 . + 0 ID=cds2472;Parent=gene2553;Dbxref=ASAP:ABE-0008204,UniProtKB/Swiss-Prot:P71229,Genbank:NP_416986.4,EcoGene:EG14219,GeneID:948886;Name=NP_416986.4;Note=putative 2-component regulator%2C interaction with sigma 54;gbkey=CDS;gene=hyfR;product=hydrogenase-4 transcriptional activator;protein_id=NP_416986.4;transl_table=11 NC_000913.3 RefSeq gene 2613934 2614782 . + . ID=gene2554;Dbxref=EcoGene:EG14220,GeneID:949032;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;gene_synonym=ECK2488,JW2477;locus_tag=b2492 NC_000913.3 RefSeq CDS 2613934 2614782 . + 0 ID=cds2473;Parent=gene2554;Dbxref=ASAP:ABE-0008206,UniProtKB/Swiss-Prot:P77733,Genbank:NP_416987.1,EcoGene:EG14220,GeneID:949032;Name=NP_416987.1;Note=probable formate transporter (formate channel 2);gbkey=CDS;gene=focB;product=putative formate transporter;protein_id=NP_416987.1;transl_table=11 NC_000913.3 RefSeq gene 2614820 2615881 . - . ID=gene2555;Dbxref=EcoGene:EG14221,GeneID:945894;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;gene_synonym=ECK2489,JW2478,perM;locus_tag=b2493 NC_000913.3 RefSeq CDS 2614820 2615881 . - 0 ID=cds2474;Parent=gene2555;Dbxref=ASAP:ABE-0008208,UniProtKB/Swiss-Prot:P0AFI9,Genbank:NP_416988.1,EcoGene:EG14221,GeneID:945894;Name=NP_416988.1;Note=putative permease;gbkey=CDS;gene=yfgO;product=putative UPF0118 family inner membrane permease;protein_id=NP_416988.1;transl_table=11 NC_000913.3 RefSeq gene 2616094 2617557 . + . ID=gene2556;Dbxref=EcoGene:EG14199,GeneID:947029;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;gene_synonym=ECK2490,JW2479,yfgC;locus_tag=b2494 NC_000913.3 RefSeq CDS 2616094 2617557 . + 0 ID=cds2475;Parent=gene2556;Dbxref=ASAP:ABE-0008212,UniProtKB/Swiss-Prot:P66948,Genbank:NP_416989.1,EcoGene:EG14199,GeneID:947029;Name=NP_416989.1;gbkey=CDS;gene=bepA;product=OM protein maintenance and assembly metalloprotease and chaperone%2C periplasmic;protein_id=NP_416989.1;transl_table=11 NC_000913.3 RefSeq gene 2617578 2617937 . + . ID=gene2557;Dbxref=EcoGene:EG14200,GeneID:946974;Name=yfgD;gbkey=Gene;gene=yfgD;gene_biotype=protein_coding;gene_synonym=ECK2491,JW2480;locus_tag=b2495 NC_000913.3 RefSeq CDS 2617578 2617937 . + 0 ID=cds2476;Parent=gene2557;Dbxref=ASAP:ABE-0008214,UniProtKB/Swiss-Prot:P76569,Genbank:NP_416990.1,EcoGene:EG14200,GeneID:946974;Name=NP_416990.1;Note=putative oxidoreductase;gbkey=CDS;gene=yfgD;product=putative oxidoreductase;protein_id=NP_416990.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2617968 2618004 . + . ID=id306;Note=REP182 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2618075 2618776 . - . ID=gene2558;Dbxref=EcoGene:EG14201,GeneID:946977;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;gene_synonym=ECK2492,idaB,JW5397,yfgE;locus_tag=b2496 NC_000913.3 RefSeq CDS 2618075 2618776 . - 0 ID=cds2477;Parent=gene2558;Dbxref=ASAP:ABE-0008217,UniProtKB/Swiss-Prot:P69931,Genbank:NP_416991.2,EcoGene:EG14201,GeneID:946977;Name=NP_416991.2;Note=putative DNA replication factor;gbkey=CDS;gene=hda;product=ATPase regulatory factor involved in DnaA inactivation;protein_id=NP_416991.2;transl_table=11 NC_000913.3 RefSeq gene 2618871 2620160 . - . ID=gene2559;Dbxref=EcoGene:EG12129,GeneID:946978;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;gene_synonym=ECK2493,JW2482;locus_tag=b2497 NC_000913.3 RefSeq CDS 2618871 2620160 . - 0 ID=cds2478;Parent=gene2559;Dbxref=ASAP:ABE-0008219,UniProtKB/Swiss-Prot:P0AGM7,Genbank:NP_416992.1,EcoGene:EG12129,GeneID:946978;Name=NP_416992.1;Note=uracil transport;gbkey=CDS;gene=uraA;product=uracil permease;protein_id=NP_416992.1;transl_table=11 NC_000913.3 RefSeq gene 2620246 2620872 . - . ID=gene2560;Dbxref=EcoGene:EG11332,GeneID:946979;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;gene_synonym=ECK2494,JW2483,uraP;locus_tag=b2498 NC_000913.3 RefSeq CDS 2620246 2620872 . - 0 ID=cds2479;Parent=gene2560;Dbxref=ASAP:ABE-0008224,UniProtKB/Swiss-Prot:P0A8F0,Genbank:NP_416993.2,EcoGene:EG11332,GeneID:946979;Name=NP_416993.2;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=NP_416993.2;transl_table=11 NC_000913.3 RefSeq gene 2621197 2622234 . + . ID=gene2561;Dbxref=EcoGene:EG10798,GeneID:946975;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;gene_synonym=ECK2495,JW2484,purG,purI;locus_tag=b2499 NC_000913.3 RefSeq CDS 2621197 2622234 . + 0 ID=cds2480;Parent=gene2561;Dbxref=ASAP:ABE-0008230,UniProtKB/Swiss-Prot:P08178,Genbank:NP_416994.1,EcoGene:EG10798,GeneID:946975;Name=NP_416994.1;Note=phosphoribosylaminoimidazole synthetase %3D AIR synthetase;gbkey=CDS;gene=purM;product=phosphoribosylaminoimidazole synthetase;protein_id=NP_416994.1;transl_table=11 NC_000913.3 RefSeq gene 2622234 2622872 . + . ID=gene2562;Dbxref=EcoGene:EG10799,GeneID:946973;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;gene_synonym=ade,ECK2496,JW2485;locus_tag=b2500 NC_000913.3 RefSeq CDS 2622234 2622872 . + 0 ID=cds2481;Parent=gene2562;Dbxref=ASAP:ABE-0008232,UniProtKB/Swiss-Prot:P08179,Genbank:NP_416995.1,EcoGene:EG10799,GeneID:946973;Name=NP_416995.1;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase 1;protein_id=NP_416995.1;transl_table=11 NC_000913.3 RefSeq gene 2623044 2625110 . + . ID=gene2563;Dbxref=EcoGene:EG11510,GeneID:946971;Name=ppk;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;gene_synonym=ECK2497,JW2486;locus_tag=b2501 NC_000913.3 RefSeq CDS 2623044 2625110 . + 0 ID=cds2482;Parent=gene2563;Dbxref=ASAP:ABE-0008235,UniProtKB/Swiss-Prot:P0A7B1,Genbank:NP_416996.1,EcoGene:EG11510,GeneID:946971;Name=NP_416996.1;Note=polyphosphate kinase;gbkey=CDS;gene=ppk;product=polyphosphate kinase%2C component of RNA degradosome;protein_id=NP_416996.1;transl_table=11 NC_000913.3 RefSeq gene 2625115 2626656 . + . ID=gene2564;Dbxref=EcoGene:EG11403,GeneID:946970;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;gene_synonym=ECK2498,JW2487;locus_tag=b2502 NC_000913.3 RefSeq CDS 2625115 2626656 . + 0 ID=cds2483;Parent=gene2564;Dbxref=ASAP:ABE-0008238,UniProtKB/Swiss-Prot:P0AFL6,Genbank:NP_416997.1,EcoGene:EG11403,GeneID:946970;Name=NP_416997.1;gbkey=CDS;gene=ppx;product=exopolyphosphatase;protein_id=NP_416997.1;transl_table=11 NC_000913.3 RefSeq gene 2626695 2628938 . - . ID=gene2565;Dbxref=EcoGene:EG14202,GeneID:946968;Name=yfgF;gbkey=Gene;gene=yfgF;gene_biotype=protein_coding;gene_synonym=ECK2499,JW2488;locus_tag=b2503 NC_000913.3 RefSeq CDS 2626695 2628938 . - 0 ID=cds2484;Parent=gene2565;Dbxref=ASAP:ABE-0008240,UniProtKB/Swiss-Prot:P77172,Genbank:NP_416998.1,EcoGene:EG14202,GeneID:946968;Name=NP_416998.1;Note=putative cytochrome C-type biogenesis protein;gbkey=CDS;gene=yfgF;product=cyclic-di-GMP phosphodiesterase%2C anaerobic;protein_id=NP_416998.1;transl_table=11 NC_000913.3 RefSeq gene 2629290 2629481 . + . ID=gene2566;Dbxref=EcoGene:EG14203,GeneID:946980;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;gene_synonym=ECK2500,JW5399;locus_tag=b2504 NC_000913.3 RefSeq CDS 2629290 2629481 . + 0 ID=cds2485;Parent=gene2566;Dbxref=ASAP:ABE-0008247,UniProtKB/Swiss-Prot:P64545,Genbank:NP_416999.1,EcoGene:EG14203,GeneID:946980;Name=NP_416999.1;gbkey=CDS;gene=yfgG;product=uncharacterized protein;protein_id=NP_416999.1;transl_table=11 NC_000913.3 RefSeq gene 2629792 2630310 . + . ID=gene2567;Dbxref=EcoGene:EG14204,GeneID:945709;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;gene_synonym=ECK2501,JW5400;locus_tag=b2505 NC_000913.3 RefSeq CDS 2629792 2630310 . + 0 ID=cds2486;Parent=gene2567;Dbxref=ASAP:ABE-0008250,UniProtKB/Swiss-Prot:P65290,Genbank:NP_417000.1,EcoGene:EG14204,GeneID:945709;Name=NP_417000.1;Note=putative outer membrane lipoprotein;gbkey=CDS;gene=yfgH;product=outer membrane integrity lipoprotein;protein_id=NP_417000.1;transl_table=11 NC_000913.3 RefSeq gene 2630326 2630865 . + . ID=gene2568;Dbxref=EcoGene:EG14205,GeneID:945168;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;gene_synonym=ECK2502,JW2490;locus_tag=b2506 NC_000913.3 RefSeq CDS 2630326 2630865 . + 0 ID=cds2487;Parent=gene2568;Dbxref=ASAP:ABE-0008252,UniProtKB/Swiss-Prot:P76573,Genbank:NP_417001.1,EcoGene:EG14205,GeneID:945168;Name=NP_417001.1;Note=putative membrane protein;gbkey=CDS;gene=yfgI;product=nalidixic acid resistance protein%2C putative periplasmic protein;protein_id=NP_417001.1;transl_table=11 NC_000913.3 RefSeq gene 2630958 2632535 . - . ID=gene2569;Dbxref=EcoGene:EG10420,GeneID:947334;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;gene_synonym=ECK2503,JW2491;locus_tag=b2507 NC_000913.3 RefSeq CDS 2630958 2632535 . - 0 ID=cds2488;Parent=gene2569;Dbxref=ASAP:ABE-0008254,UniProtKB/Swiss-Prot:P04079,Genbank:NP_417002.1,EcoGene:EG10420,GeneID:947334;Name=NP_417002.1;Note=GMP synthetase (glutamine-hydrolyzing);gbkey=CDS;gene=guaA;product=GMP synthetase (glutamine aminotransferase);protein_id=NP_417002.1;transl_table=11 NC_000913.3 RefSeq gene 2632604 2634070 . - . ID=gene2570;Dbxref=EcoGene:EG10421,GeneID:946985;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;gene_synonym=ECK2504,guaR,JW5401;locus_tag=b2508 NC_000913.3 RefSeq CDS 2632604 2634070 . - 0 ID=cds2489;Parent=gene2570;Dbxref=ASAP:ABE-0008257,UniProtKB/Swiss-Prot:P0ADG7,Genbank:NP_417003.1,EcoGene:EG10421,GeneID:946985;Name=NP_417003.1;gbkey=CDS;gene=guaB;product=IMP dehydrogenase;protein_id=NP_417003.1;transl_table=11 NC_000913.3 RefSeq gene 2634232 2635602 . + . ID=gene2571;Dbxref=EcoGene:EG11072,GeneID:946988;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;gene_synonym=ECK2505,JW2493,xse;locus_tag=b2509 NC_000913.3 RefSeq CDS 2634232 2635602 . + 0 ID=cds2490;Parent=gene2571;Dbxref=ASAP:ABE-0008263,UniProtKB/Swiss-Prot:P04994,Genbank:NP_417004.1,EcoGene:EG11072,GeneID:946988;Name=NP_417004.1;gbkey=CDS;gene=xseA;product=exonuclease VII%2C large subunit;protein_id=NP_417004.1;transl_table=11 NC_000913.3 RefSeq gene 2635599 2635814 . - . ID=gene2572;Dbxref=EcoGene:EG14206,GeneID:946984;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;gene_synonym=ECK2506,JW5402;locus_tag=b2510 NC_000913.3 RefSeq CDS 2635599 2635814 . - 0 ID=cds2491;Parent=gene2572;Dbxref=ASAP:ABE-0008266,UniProtKB/Swiss-Prot:P76575,Genbank:NP_417005.2,EcoGene:EG14206,GeneID:946984;Name=NP_417005.2;gbkey=CDS;gene=yfgJ;product=DUF1407 family protein;protein_id=NP_417005.2;transl_table=11 NC_000913.3 RefSeq gene 2635884 2637356 . - . ID=gene2573;Dbxref=EcoGene:EG14207,GeneID:946983;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;gene_synonym=ECK2507,engA,JW5403,yfgK;locus_tag=b2511 NC_000913.3 RefSeq CDS 2635884 2637356 . - 0 ID=cds2492;Parent=gene2573;Dbxref=ASAP:ABE-0008270,UniProtKB/Swiss-Prot:P0A6P5,Genbank:NP_417006.2,EcoGene:EG14207,GeneID:946983;Name=NP_417006.2;Note=putative GTP-binding factor;gbkey=CDS;gene=der;product=GTPase%3B multicopy suppressor of ftsJ;protein_id=NP_417006.2;transl_table=11 NC_000913.3 RefSeq gene 2637474 2638652 . - . ID=gene2574;Dbxref=EcoGene:EG14208,GeneID:946982;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;gene_synonym=ECK2508,JW2496,yfgL;locus_tag=b2512 NC_000913.3 RefSeq CDS 2637474 2638652 . - 0 ID=cds2493;Parent=gene2574;Dbxref=ASAP:ABE-0008272,UniProtKB/Swiss-Prot:P77774,Genbank:NP_417007.1,EcoGene:EG14208,GeneID:946982;Name=NP_417007.1;Note=putative dehydrogenase;gbkey=CDS;gene=bamB;product=BamABCDE complex OM biogenesis lipoprotein;protein_id=NP_417007.1;transl_table=11 NC_000913.3 RefSeq gene 2638663 2639283 . - . ID=gene2575;Dbxref=EcoGene:EG14209,GeneID:946981;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;gene_synonym=ECK2509,JW2497;locus_tag=b2513 NC_000913.3 RefSeq CDS 2638663 2639283 . - 0 ID=cds2494;Parent=gene2575;Dbxref=ASAP:ABE-0008274,UniProtKB/Swiss-Prot:P76576,Genbank:NP_417008.1,EcoGene:EG14209,GeneID:946981;Name=NP_417008.1;gbkey=CDS;gene=yfgM;product=ancillary SecYEG translocon subunit%3B putative anti-RcsB factor;protein_id=NP_417008.1;transl_table=11 NC_000913.3 RefSeq gene 2639301 2640575 . - . ID=gene2576;Dbxref=EcoGene:EG10453,GeneID:946989;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;gene_synonym=ECK2510,JW2498;locus_tag=b2514 NC_000913.3 RefSeq CDS 2639301 2640575 . - 0 ID=cds2495;Parent=gene2576;Dbxref=ASAP:ABE-0008278,UniProtKB/Swiss-Prot:P60906,Genbank:NP_417009.1,EcoGene:EG10453,GeneID:946989;Name=NP_417009.1;Note=histidine tRNA synthetase;gbkey=CDS;gene=hisS;product=histidyl tRNA synthetase;protein_id=NP_417009.1;transl_table=11 NC_000913.3 RefSeq gene 2640686 2641804 . - . ID=gene2577;Dbxref=EcoGene:EG10370,GeneID:946991;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=ECK2511,gcpE,JW2499;locus_tag=b2515 NC_000913.3 RefSeq CDS 2640686 2641804 . - 0 ID=cds2496;Parent=gene2577;Dbxref=ASAP:ABE-0008281,UniProtKB/Swiss-Prot:P62620,Genbank:NP_417010.1,EcoGene:EG10370,GeneID:946991;Name=NP_417010.1;gbkey=CDS;gene=ispG;product=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase;protein_id=NP_417010.1;transl_table=11 NC_000913.3 RefSeq gene 2641831 2642844 . - . ID=gene2578;Dbxref=EcoGene:EG10015,GeneID:946992;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;gene_synonym=ECK2512,JW2500,yfgA;locus_tag=b2516 NC_000913.3 RefSeq CDS 2641831 2642844 . - 0 ID=cds2497;Parent=gene2578;Dbxref=ASAP:ABE-0008283,UniProtKB/Swiss-Prot:P27434,Genbank:NP_417011.1,EcoGene:EG10015,GeneID:946992;Name=NP_417011.1;Note=putative membrane protein;gbkey=CDS;gene=rodZ;product=MreB assembly cytoskeletal protein;protein_id=NP_417011.1;transl_table=11 NC_000913.3 RefSeq gene 2643129 2644283 . - . ID=gene2579;Dbxref=EcoGene:EG12401,GeneID:946249;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=ECK2513,JW2501,yfgB;locus_tag=b2517 NC_000913.3 RefSeq CDS 2643129 2644283 . - 0 ID=cds2498;Parent=gene2579;Dbxref=ASAP:ABE-0008287,UniProtKB/Swiss-Prot:P36979,Genbank:NP_417012.1,EcoGene:EG12401,GeneID:946249;Name=NP_417012.1;gbkey=CDS;gene=rlmN;product=dual specificity 23S rRNA m(2)A2503%2C tRNA m(2)A37 methyltransferase%2C SAM-dependent;protein_id=NP_417012.1;transl_table=11 NC_000913.3 RefSeq gene 2644433 2644864 . - . ID=gene2580;Dbxref=EcoGene:EG10650,GeneID:945611;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;gene_synonym=ECK2514,JW2502;locus_tag=b2518 NC_000913.3 RefSeq CDS 2644433 2644864 . - 0 ID=cds2499;Parent=gene2580;Dbxref=ASAP:ABE-0008291,UniProtKB/Swiss-Prot:P0A763,Genbank:NP_417013.1,EcoGene:EG10650,GeneID:945611;Name=NP_417013.1;Note=nucleoside diphosphate kinase;gbkey=CDS;gene=ndk;product=multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase;protein_id=NP_417013.1;transl_table=11 NC_000913.3 RefSeq gene 2645013 2647325 . - . ID=gene2581;Dbxref=EcoGene:EG14210,GeneID:947152;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;gene_synonym=ECK2515,JW2503,yfgN;locus_tag=b2519 NC_000913.3 RefSeq CDS 2645013 2647325 . - 0 ID=cds2500;Parent=gene2581;Dbxref=ASAP:ABE-0008294,UniProtKB/Swiss-Prot:P76577,Genbank:NP_417014.1,EcoGene:EG14210,GeneID:947152;Name=NP_417014.1;Note=penicillin binding protein 1C (PBP 1C);gbkey=CDS;gene=pbpC;product=penicillin-insensitive murein repair transglycosylase%3B inactive transpeptidase domain protein;protein_id=NP_417014.1;transl_table=11 NC_000913.3 RefSeq gene 2647326 2652287 . - . ID=gene2582;Dbxref=EcoGene:EG13394,GeneID:947302;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;gene_synonym=ECK2516,JW2504;locus_tag=b2520 NC_000913.3 RefSeq CDS 2647326 2652287 . - 0 ID=cds2501;Parent=gene2582;Dbxref=ASAP:ABE-0008296,UniProtKB/Swiss-Prot:P76578,Genbank:NP_417015.1,EcoGene:EG13394,GeneID:947302;Name=NP_417015.1;gbkey=CDS;gene=yfhM;product=bacterial alpha2-macroglobulin colonization factor ECAM%3B anti-host protease defense factor%3B periplasmic inner membrane-anchored lipoprotein;protein_id=NP_417015.1;transl_table=11 NC_000913.3 RefSeq gene 2652494 2653339 . + . ID=gene2583;Dbxref=EcoGene:EG11600,GeneID:946993;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;gene_synonym=ECK2517,JW2505;locus_tag=b2521 NC_000913.3 RefSeq CDS 2652494 2653339 . + 0 ID=cds2502;Parent=gene2583;Dbxref=ASAP:ABE-0008299,UniProtKB/Swiss-Prot:P31142,Genbank:NP_417016.4,EcoGene:EG11600,GeneID:946993;Name=NP_417016.4;Note=putative thiosulfate sulfurtransferase;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=NP_417016.4;transl_table=11 NC_000913.3 RefSeq gene 2653855 2654158 . + . ID=gene2584;Dbxref=EcoGene:EG31154,GeneID:2847714;Name=ryfA;gbkey=Gene;gene=ryfA;gene_biotype=ncRNA;gene_synonym=ECK2518,JWR0244,PAIR3b,tp1;locus_tag=b4440 NC_000913.3 RefSeq ncRNA 2653855 2654158 . + . ID=rna80;Parent=gene2584;Dbxref=ASAP:ABE-0047260,EcoGene:EG31154,GeneID:2847714;Note=identified in a large scale screen;gbkey=ncRNA;gene=ryfA;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 2653855 2654158 . + . ID=id307;Parent=rna80;Dbxref=ASAP:ABE-0047260,EcoGene:EG31154,GeneID:2847714;Note=identified in a large scale screen;gbkey=ncRNA;gene=ryfA;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 2654157 2654933 . - . ID=gene2585;Dbxref=EcoGene:EG11601,GeneID:946994;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;gene_synonym=ECK2519,JW5404;locus_tag=b2522 NC_000913.3 RefSeq CDS 2654157 2654933 . - 0 ID=cds2503;Parent=gene2585;Dbxref=ASAP:ABE-0008301,UniProtKB/Swiss-Prot:P0AFZ1,Genbank:NP_417017.4,EcoGene:EG11601,GeneID:946994;Name=NP_417017.4;Note=enhanced serine sensitivity;gbkey=CDS;gene=sseB;product=rhodanase-like enzyme%2C sulfur transfer from thiosulfate;protein_id=NP_417017.4;transl_table=11 NC_000913.3 RefSeq repeat_region 2654970 2655066 . + . ID=id308;Note=RIP183 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2655075 2656358 . - . ID=gene2586;Dbxref=EcoGene:EG12310,GeneID:948766;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;gene_synonym=ECK2520,JW2507,yfhI;locus_tag=b2523 NC_000913.3 RefSeq CDS 2655075 2656358 . - 0 ID=cds2504;Parent=gene2586;Dbxref=ASAP:ABE-0008305,UniProtKB/Swiss-Prot:P37095,Genbank:NP_417018.4,EcoGene:EG12310,GeneID:948766;Name=NP_417018.4;Note=putative peptidase;gbkey=CDS;gene=pepB;product=aminopeptidase B;protein_id=NP_417018.4;transl_table=11 NC_000913.3 RefSeq gene 2656536 2656736 . - . ID=gene2587;Dbxref=EcoGene:EG12311,GeneID:945196;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;gene_synonym=ECK2521,JW2508,yfhJ;locus_tag=b2524 NC_000913.3 RefSeq CDS 2656536 2656736 . - 0 ID=cds2505;Parent=gene2587;Dbxref=ASAP:ABE-0008309,UniProtKB/Swiss-Prot:P0C0L9,Genbank:NP_417019.1,EcoGene:EG12311,GeneID:945196;Name=NP_417019.1;gbkey=CDS;gene=iscX;product=Fe(2+) donor and activity modulator for cysteine desulfurase;protein_id=NP_417019.1;transl_table=11 NC_000913.3 RefSeq gene 2656748 2657083 . - . ID=gene2588;Dbxref=EcoGene:EG11328,GeneID:947160;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;gene_synonym=ECK2522,JW2509;locus_tag=b2525 NC_000913.3 RefSeq CDS 2656748 2657083 . - 0 ID=cds2506;Parent=gene2588;Dbxref=ASAP:ABE-0008311,UniProtKB/Swiss-Prot:P0A9R4,Genbank:NP_417020.1,EcoGene:EG11328,GeneID:947160;Name=NP_417020.1;Note=[2FE-2S] ferredoxin%2C electron carrer protein;gbkey=CDS;gene=fdx;product=[2Fe-2S] ferredoxin;protein_id=NP_417020.1;transl_table=11 NC_000913.3 RefSeq gene 2657085 2658935 . - . ID=gene2589;Dbxref=EcoGene:EG12130,GeneID:944885;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;gene_synonym=ECK2523,hsc,JW2510;locus_tag=b2526 NC_000913.3 RefSeq CDS 2657085 2658935 . - 0 ID=cds2507;Parent=gene2589;Dbxref=ASAP:ABE-0008315,UniProtKB/Swiss-Prot:P0A6Z1,Genbank:NP_417021.1,EcoGene:EG12130,GeneID:944885;Name=NP_417021.1;Note=DnaK-homologue chaperone Hsc66;gbkey=CDS;gene=hscA;product=DnaK-like molecular chaperone specific for IscU;protein_id=NP_417021.1;transl_table=11 NC_000913.3 RefSeq gene 2658952 2659467 . - . ID=gene2590;Dbxref=EcoGene:EG12131,GeneID:946995;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;gene_synonym=ECK2524,JW2511,yfhE;locus_tag=b2527 NC_000913.3 RefSeq CDS 2658952 2659467 . - 0 ID=cds2508;Parent=gene2590;Dbxref=ASAP:ABE-0008317,UniProtKB/Swiss-Prot:P0A6L9,Genbank:NP_417022.1,EcoGene:EG12131,GeneID:946995;Name=NP_417022.1;gbkey=CDS;gene=hscB;product=HscA co-chaperone%2C J domain-containing protein Hsc56%3B IscU-specific chaperone HscAB;protein_id=NP_417022.1;transl_table=11 NC_000913.3 RefSeq gene 2659563 2659886 . - . ID=gene2591;Dbxref=EcoGene:EG12132,GeneID:946999;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;gene_synonym=ECK2525,JW2512,yfhF;locus_tag=b2528 NC_000913.3 RefSeq CDS 2659563 2659886 . - 0 ID=cds2509;Parent=gene2591;Dbxref=ASAP:ABE-0008319,UniProtKB/Swiss-Prot:P0AAC8,Genbank:NP_417023.1,EcoGene:EG12132,GeneID:946999;Name=NP_417023.1;gbkey=CDS;gene=iscA;product=FeS cluster assembly protein;protein_id=NP_417023.1;transl_table=11 NC_000913.3 RefSeq gene 2659903 2660289 . - . ID=gene2592;Dbxref=EcoGene:EG13395,GeneID:947002;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;gene_synonym=ECK2526,hsm-5,JW2513,miaC,nifU,yfhN;locus_tag=b2529 NC_000913.3 RefSeq CDS 2659903 2660289 . - 0 ID=cds2510;Parent=gene2592;Dbxref=ASAP:ABE-0008321,UniProtKB/Swiss-Prot:P0ACD4,Genbank:NP_417024.1,EcoGene:EG13395,GeneID:947002;Name=NP_417024.1;gbkey=CDS;gene=iscU;product=iron-sulfur cluster assembly scaffold protein;protein_id=NP_417024.1;transl_table=11 NC_000913.3 RefSeq gene 2660317 2661531 . - . ID=gene2593;Dbxref=EcoGene:EG12677,GeneID:947004;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;gene_synonym=ECK2527,JW2514,nuvC,yfhO,yzzO;locus_tag=b2530 NC_000913.3 RefSeq CDS 2660317 2661531 . - 0 ID=cds2511;Parent=gene2593;Dbxref=ASAP:ABE-0008324,UniProtKB/Swiss-Prot:P0A6B7,Genbank:YP_026169.1,EcoGene:EG12677,GeneID:947004;Name=YP_026169.1;Note=cysteine desulfurase~cysteine desulfurase (tRNA sulfurtransferase) PLP-dependent;gbkey=CDS;gene=iscS;product=cysteine desulfurase (tRNA sulfurtransferase)%2C PLP-dependent;protein_id=YP_026169.1;transl_table=11 NC_000913.3 RefSeq gene 2661643 2662131 . - . ID=gene2594;Dbxref=EcoGene:EG13397,GeneID:945279;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;gene_synonym=ECK2528,JW2515,yfhP;locus_tag=b2531 NC_000913.3 RefSeq CDS 2661643 2662131 . - 0 ID=cds2512;Parent=gene2594;Dbxref=ASAP:ABE-0008326,UniProtKB/Swiss-Prot:P0AGK8,Genbank:NP_417026.1,EcoGene:EG13397,GeneID:945279;Name=NP_417026.1;Note=Fe-S cluster-containing transcription factor~transcriptional repressor of iscRSUA operon;gbkey=CDS;gene=iscR;product=isc operon transcriptional repressor%3B suf operon transcriptional activator%3B oxidative stress- and iron starvation-inducible%3B autorepressor;protein_id=NP_417026.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2662309 2662574 . + . ID=id309;Note=REP184 (repetitive extragenic palindromic) element%3B contains 6 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2662583 2663323 . - . ID=gene2595;Dbxref=EcoGene:EG13452,GeneID:948610;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;gene_synonym=ECK2529,JW2516,yfhQ;locus_tag=b2532 NC_000913.3 RefSeq CDS 2662583 2663323 . - 0 ID=cds2513;Parent=gene2595;Dbxref=ASAP:ABE-0008332,UniProtKB/Swiss-Prot:P0AE01,Genbank:NP_417027.1,EcoGene:EG13452,GeneID:948610;Name=NP_417027.1;gbkey=CDS;gene=trmJ;product=tRNA mC32%2CmU32 2'-O-methyltransferase%2C SAM-dependent;protein_id=NP_417027.1;transl_table=11 NC_000913.3 RefSeq gene 2663442 2664245 . + . ID=gene2596;Dbxref=EcoGene:EG10983,GeneID:947285;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;gene_synonym=ECK2530,JW2517,ssyA;locus_tag=b2533 NC_000913.3 RefSeq CDS 2663442 2664245 . + 0 ID=cds2514;Parent=gene2596;Dbxref=ASAP:ABE-0008337,UniProtKB/Swiss-Prot:P0ADG4,Genbank:NP_417028.1,EcoGene:EG10983,GeneID:947285;Name=NP_417028.1;Note=inositol-1-monophosphatase;gbkey=CDS;gene=suhB;product=inositol monophosphatase;protein_id=NP_417028.1;transl_table=11 NC_000913.3 RefSeq gene 2664390 2665244 . + . ID=gene2597;Dbxref=EcoGene:EG13453,GeneID:945059;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;gene_synonym=ECK2531,JW2518;locus_tag=b2534 NC_000913.3 RefSeq CDS 2664390 2665244 . + 0 ID=cds2515;Parent=gene2597;Dbxref=ASAP:ABE-0008340,UniProtKB/Swiss-Prot:P77538,Genbank:NP_417029.4,EcoGene:EG13453,GeneID:945059;Name=NP_417029.4;Note=putative enzyme (3.4.-);gbkey=CDS;gene=yfhR;product=putative S9 family prolyl oligopeptidase;protein_id=NP_417029.4;transl_table=11 NC_000913.3 RefSeq gene 2665435 2666715 . + . ID=gene2598;Dbxref=EcoGene:EG13418,GeneID:947009;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;gene_synonym=csi-16,ECK2532,JW5878;locus_tag=b2535 NC_000913.3 RefSeq CDS 2665435 2666715 . + 0 ID=cds2516;Parent=gene2598;Dbxref=ASAP:ABE-0008346,UniProtKB/Swiss-Prot:P54901,Genbank:NP_417030.2,EcoGene:EG13418,GeneID:947009;Name=NP_417030.2;gbkey=CDS;gene=csiE;product=stationary phase inducible protein;protein_id=NP_417030.2;transl_table=11 NC_000913.3 RefSeq gene 2666707 2667846 . - . ID=gene2599;Dbxref=EcoGene:EG13454,GeneID:947007;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;gene_synonym=ECK2533,JW2520,yfhS;locus_tag=b2536 NC_000913.3 RefSeq CDS 2666707 2667846 . - 0 ID=cds2517;Parent=gene2599;Dbxref=ASAP:ABE-0008348,UniProtKB/Swiss-Prot:Q47142,Genbank:NP_417031.1,EcoGene:EG13454,GeneID:947007;Name=NP_417031.1;Note=MFS (major facilitator superfamily) transporter;gbkey=CDS;gene=hcaT;product=putative 3-phenylpropionic transporter;protein_id=NP_417031.1;transl_table=11 NC_000913.3 RefSeq gene 2668006 2668896 . - . ID=gene2600;Dbxref=EcoGene:EG13455,GeneID:947000;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;gene_synonym=ECK2534,JW2521,phdR,yfhT;locus_tag=b2537 NC_000913.3 RefSeq CDS 2668006 2668896 . - 0 ID=cds2518;Parent=gene2600;Dbxref=ASAP:ABE-0008351,UniProtKB/Swiss-Prot:Q47141,Genbank:NP_417032.1,EcoGene:EG13455,GeneID:947000;Name=NP_417032.1;Note=transcriptional activator of hca cluster~completely contained in another CDS;gbkey=CDS;gene=hcaR;product=hca operon transcriptional regulator;protein_id=NP_417032.1;transl_table=11 NC_000913.3 RefSeq gene 2668006 2668071 . - . ID=gene2601;Dbxref=EcoGene:EG14501,GeneID:14678510;Name=iroK;gbkey=Gene;gene=iroK;gene_biotype=protein_coding;gene_synonym=ECK4518;locus_tag=b4706 NC_000913.3 RefSeq CDS 2668006 2668071 . - 0 ID=cds2519;Parent=gene2601;Dbxref=Genbank:YP_008592385.1,EcoGene:EG14501,GeneID:14678510;Name=YP_008592385.1;Note=completely contained in another CDS;gbkey=CDS;gene=iroK;product=3-hydroxypropionic acid resistance peptide;protein_id=YP_008592385.1;transl_table=11 NC_000913.3 RefSeq gene 2669032 2670393 . + . ID=gene2602;Dbxref=EcoGene:EG13456,GeneID:946998;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;gene_synonym=digA,ECK2535,hcaA,hcaA1,JW2522,phdC1,yfhU;locus_tag=b2538 NC_000913.3 RefSeq CDS 2669032 2670393 . + 0 ID=cds2520;Parent=gene2602;Dbxref=ASAP:ABE-0008355,UniProtKB/Swiss-Prot:P0ABR5,Genbank:NP_417033.1,EcoGene:EG13456,GeneID:946998;Name=NP_417033.1;gbkey=CDS;gene=hcaE;product=3-phenylpropionate dioxygenase%2C large (alpha) subunit;protein_id=NP_417033.1;transl_table=11 NC_000913.3 RefSeq gene 2670390 2670908 . + . ID=gene2603;Dbxref=EcoGene:EG13457,GeneID:946997;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;gene_synonym=digB,ECK2536,hcaA,hcaA2,hcaB,JW2523,phdC2,yfhV;locus_tag=b2539 NC_000913.3 RefSeq CDS 2670390 2670908 . + 0 ID=cds2521;Parent=gene2603;Dbxref=ASAP:ABE-0008357,UniProtKB/Swiss-Prot:Q47140,Genbank:NP_417034.1,EcoGene:EG13457,GeneID:946997;Name=NP_417034.1;Note=small terminal subunit of phenylpropionate dioxygenase;gbkey=CDS;gene=hcaF;product=3-phenylpropionate dioxygenase%2C small (beta) subunit;protein_id=NP_417034.1;transl_table=11 NC_000913.3 RefSeq gene 2670908 2671228 . + . ID=gene2604;Dbxref=EcoGene:EG13458,GeneID:947015;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;gene_synonym=ECK2537,hcaA3,JW2524,phdB,yfhW;locus_tag=b2540 NC_000913.3 RefSeq CDS 2670908 2671228 . + 0 ID=cds2522;Parent=gene2604;Dbxref=ASAP:ABE-0008359,UniProtKB/Swiss-Prot:P0ABW0,Genbank:NP_417035.1,EcoGene:EG13458,GeneID:947015;Name=NP_417035.1;Note=ferredoxin subunit of phenylpropionate dioxygenase;gbkey=CDS;gene=hcaC;product=3-phenylpropionate dioxygenase%2C ferredoxin subunit;protein_id=NP_417035.1;transl_table=11 NC_000913.3 RefSeq gene 2671225 2672037 . + . ID=gene2605;Dbxref=EcoGene:EG13459,GeneID:945346;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=ECK2538,JW2525,phdD,yfhX;locus_tag=b2541 NC_000913.3 RefSeq CDS 2671225 2672037 . + 0 ID=cds2523;Parent=gene2605;Dbxref=ASAP:ABE-0008361,UniProtKB/Swiss-Prot:P0CI31,Genbank:NP_417036.1,EcoGene:EG13459,GeneID:945346;Name=NP_417036.1;gbkey=CDS;gene=hcaB;product=2%2C3-dihydroxy-2%2C3-dihydrophenylpropionate dehydrogenase;protein_id=NP_417036.1;transl_table=11 NC_000913.3 RefSeq gene 2672047 2673249 . + . ID=gene2606;Dbxref=EcoGene:EG13460,GeneID:945427;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;gene_synonym=ECK2539,hcaA4,JW2526,phdA,yfhY;locus_tag=b2542 NC_000913.3 RefSeq CDS 2672047 2673249 . + 0 ID=cds2524;Parent=gene2606;Dbxref=ASAP:ABE-0008363,UniProtKB/Swiss-Prot:P77650,Genbank:NP_417037.1,EcoGene:EG13460,GeneID:945427;Name=NP_417037.1;Note=ferredoxin reductase subunit of phenylpropionate dioxygenase;gbkey=CDS;gene=hcaD;product=phenylpropionate dioxygenase%2C ferredoxin reductase subunit;protein_id=NP_417037.1;transl_table=11 NC_000913.3 RefSeq gene 2673346 2673768 . + . ID=gene2607;Dbxref=EcoGene:EG13462,GeneID:947365;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;gene_synonym=ECK2540,JW2527;locus_tag=b2543 NC_000913.3 RefSeq CDS 2673346 2673768 . + 0 ID=cds2525;Parent=gene2607;Dbxref=ASAP:ABE-0008365,UniProtKB/Swiss-Prot:P0AD47,Genbank:NP_417038.4,EcoGene:EG13462,GeneID:947365;Name=NP_417038.4;gbkey=CDS;gene=yphA;product=DoxX family inner membrane protein;protein_id=NP_417038.4;transl_table=11 NC_000913.3 RefSeq repeat_region 2673776 2673809 . + . ID=id310;Note=REP185 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2673816 2674688 . - . ID=gene2608;Dbxref=EcoGene:EG13463,GeneID:947017;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;gene_synonym=ECK2541,JW2528;locus_tag=b2544 NC_000913.3 RefSeq CDS 2673816 2674688 . - 0 ID=cds2526;Parent=gene2608;Dbxref=ASAP:ABE-0008368,UniProtKB/Swiss-Prot:P76584,Genbank:NP_417039.1,EcoGene:EG13463,GeneID:947017;Name=NP_417039.1;gbkey=CDS;gene=yphB;product=mutarotase superfamily protein%2C YphB family;protein_id=NP_417039.1;transl_table=11 NC_000913.3 RefSeq gene 2674700 2675761 . - . ID=gene2609;Dbxref=EcoGene:EG13464,GeneID:947019;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;gene_synonym=ECK2542,JW5842;locus_tag=b2545 NC_000913.3 RefSeq CDS 2674700 2675761 . - 0 ID=cds2527;Parent=gene2609;Dbxref=ASAP:ABE-0008370,UniProtKB/Swiss-Prot:P77360,Genbank:NP_417040.2,EcoGene:EG13464,GeneID:947019;Name=NP_417040.2;Note=putative oxidoreductase;gbkey=CDS;gene=yphC;product=putative Zn-dependent NAD(P)-binding oxidoreductase;protein_id=NP_417040.2;transl_table=11 NC_000913.3 RefSeq gene 2675827 2676825 . - . ID=gene2610;Dbxref=EcoGene:EG13465,GeneID:949063;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;gene_synonym=ECK2543,JW2530;locus_tag=b2546 NC_000913.3 RefSeq CDS 2675827 2676825 . - 0 ID=cds2528;Parent=gene2610;Dbxref=ASAP:ABE-0008373,UniProtKB/Swiss-Prot:P77315,Genbank:NP_417041.1,EcoGene:EG13465,GeneID:949063;Name=NP_417041.1;Note=putative transport system permease protein;gbkey=CDS;gene=yphD;product=putative sugar ABC transporter permease;protein_id=NP_417041.1;transl_table=11 NC_000913.3 RefSeq gene 2676850 2678361 . - . ID=gene2611;Dbxref=EcoGene:EG13466,GeneID:948990;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;gene_synonym=ECK2544,JW2531;locus_tag=b2547 NC_000913.3 RefSeq CDS 2676850 2678361 . - 0 ID=cds2529;Parent=gene2611;Dbxref=ASAP:ABE-0008376,UniProtKB/Swiss-Prot:P77509,Genbank:NP_417042.1,EcoGene:EG13466,GeneID:948990;Name=NP_417042.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yphE;product=putative sugar ABC transporter ATPase;protein_id=NP_417042.1;transl_table=11 NC_000913.3 RefSeq gene 2678384 2679367 . - . ID=gene2612;Dbxref=EcoGene:EG13467,GeneID:947020;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;gene_synonym=ECK2545,JW2532;locus_tag=b2548 NC_000913.3 RefSeq CDS 2678384 2679367 . - 0 ID=cds2530;Parent=gene2612;Dbxref=ASAP:ABE-0008378,UniProtKB/Swiss-Prot:P77269,Genbank:NP_417043.1,EcoGene:EG13467,GeneID:947020;Name=NP_417043.1;Note=putative LACI-type transcriptional regulator;gbkey=CDS;gene=yphF;product=putative sugar ABC transporter periplasmic binding protein;protein_id=NP_417043.1;transl_table=11 NC_000913.3 RefSeq gene 2679464 2682745 . - . ID=gene2613;Dbxref=EcoGene:EG13468,GeneID:947021;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;gene_synonym=ECK2546,JW5405;locus_tag=b2549 NC_000913.3 RefSeq CDS 2679464 2682745 . - 0 ID=cds2531;Parent=gene2613;Dbxref=ASAP:ABE-0008380,UniProtKB/Swiss-Prot:P76585,Genbank:NP_417044.4,EcoGene:EG13468,GeneID:947021;Name=NP_417044.4;gbkey=CDS;gene=yphG;product=DUF4380 domain-containing TPR repeat protein;protein_id=NP_417044.4;transl_table=11 NC_000913.3 RefSeq gene 2682863 2684056 . + . ID=gene2614;Dbxref=EcoGene:EG13469,GeneID:947023;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;gene_synonym=ECK2547,JW5406;locus_tag=b2550 NC_000913.3 RefSeq CDS 2682863 2684056 . + 0 ID=cds2532;Parent=gene2614;Dbxref=ASAP:ABE-0008384,UniProtKB/Swiss-Prot:P76586,Genbank:NP_417045.4,EcoGene:EG13469,GeneID:947023;Name=NP_417045.4;Note=putative NAGC-like transcriptional regulator;gbkey=CDS;gene=yphH;product=putative DNA-binding transcriptional regulator;protein_id=NP_417045.4;transl_table=11 NC_000913.3 RefSeq repeat_region 2684117 2684214 . + . ID=id311;Note=RIP186 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2684254 2685507 . - . ID=gene2615;Dbxref=EcoGene:EG10408,GeneID:947022;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;gene_synonym=ECK2548,JW2535;locus_tag=b2551 NC_000913.3 RefSeq CDS 2684254 2685507 . - 0 ID=cds2533;Parent=gene2615;Dbxref=ASAP:ABE-0008389,UniProtKB/Swiss-Prot:P0A825,Genbank:NP_417046.1,EcoGene:EG10408,GeneID:947022;Name=NP_417046.1;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=NP_417046.1;transl_table=11 NC_000913.3 RefSeq gene 2685835 2687025 . + . ID=gene2616;Dbxref=EcoGene:EG10456,GeneID:947018;Name=hmp;gbkey=Gene;gene=hmp;gene_biotype=protein_coding;gene_synonym=ECK2549,fsrB,hmpA,JW2536;locus_tag=b2552 NC_000913.3 RefSeq CDS 2685835 2687025 . + 0 ID=cds2534;Parent=gene2616;Dbxref=ASAP:ABE-0008396,UniProtKB/Swiss-Prot:P24232,Genbank:NP_417047.1,EcoGene:EG10456,GeneID:947018;Name=NP_417047.1;Note=dihydropteridine reductase%2C ferrisiderophore reductase activity;gbkey=CDS;gene=hmp;product=fused nitric oxide dioxygenase/dihydropteridine reductase 2;protein_id=NP_417047.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2687035 2687054 . + . ID=id312;Note=REP187 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2687070 2687408 . - . ID=gene2617;Dbxref=EcoGene:EG10384,GeneID:947016;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;gene_synonym=ECK2550,JW2537;locus_tag=b2553 NC_000913.3 RefSeq CDS 2687070 2687408 . - 0 ID=cds2535;Parent=gene2617;Dbxref=ASAP:ABE-0008398,UniProtKB/Swiss-Prot:P0A9Z1,Genbank:NP_417048.1,EcoGene:EG10384,GeneID:947016;Name=NP_417048.1;gbkey=CDS;gene=glnB;product=regulatory protein P-II for glutamine synthetase;protein_id=NP_417048.1;transl_table=11 NC_000913.3 RefSeq gene 2687469 2688803 . - . ID=gene2618;Dbxref=EcoGene:EG11285,GeneID:947042;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;gene_synonym=ECK2551,JW2538,qseF,yfhA;locus_tag=b2554 NC_000913.3 RefSeq CDS 2687469 2688803 . - 0 ID=cds2536;Parent=gene2618;Dbxref=ASAP:ABE-0008400,UniProtKB/Swiss-Prot:P0AFU4,Genbank:NP_417049.1,EcoGene:EG11285,GeneID:947042;Name=NP_417049.1;Note=putative 2-component transcriptional regulator;gbkey=CDS;gene=glrR;product=response regulator regulating glmY sRNA in two-component system with sensor protein GlrK;protein_id=NP_417049.1;transl_table=11 NC_000913.3 RefSeq gene 2688793 2689506 . - . ID=gene2619;Dbxref=EcoGene:EG12139,GeneID:947010;Name=yfhG;gbkey=Gene;gene=yfhG;gene_biotype=protein_coding;gene_synonym=ECK2552,JW2539,qseG;locus_tag=b2555 NC_000913.3 RefSeq CDS 2688793 2689506 . - 0 ID=cds2537;Parent=gene2619;Dbxref=ASAP:ABE-0008405,UniProtKB/Swiss-Prot:P0AD44,Genbank:NP_417050.1,EcoGene:EG12139,GeneID:947010;Name=NP_417050.1;Note=putative alpha helix protein;gbkey=CDS;gene=yfhG;product=putative outer membrane protein modulating the QseEF response;protein_id=NP_417050.1;transl_table=11 NC_000913.3 RefSeq gene 2689671 2691098 . - . ID=gene2620;Dbxref=EcoGene:EG13461,GeneID:947013;Name=glrK;gbkey=Gene;gene=glrK;gene_biotype=protein_coding;gene_synonym=ECK2553,JW5407,qseE,yfhK,yfhZ;locus_tag=b2556 NC_000913.3 RefSeq CDS 2689671 2691098 . - 0 ID=cds2538;Parent=gene2620;Dbxref=ASAP:ABE-0008409,UniProtKB/Swiss-Prot:P52101,Genbank:NP_417051.2,EcoGene:EG13461,GeneID:947013;Name=NP_417051.2;Note=putative 2-component sensor protein;gbkey=CDS;gene=glrK;product=sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR;protein_id=NP_417051.2;transl_table=11 NC_000913.3 RefSeq gene 2691157 2691340 . - . ID=gene2621;Dbxref=EcoGene:EG31155,GeneID:2847700;Name=glmY;gbkey=Gene;gene=glmY;gene_biotype=ncRNA;gene_synonym=ECK2554,JWR0245,sroF,tke1;locus_tag=b4441 NC_000913.3 RefSeq ncRNA 2691157 2691340 . - . ID=rna81;Parent=gene2621;Dbxref=ASAP:ABE-0047261,EcoGene:EG31155,GeneID:2847700;Note=identified in a large scale screen;gbkey=ncRNA;gene=glmY;ncrna_class=other;product=sRNA activator of glmS mRNA%2C glmZ processing antagonist NC_000913.3 RefSeq exon 2691157 2691340 . - . ID=id313;Parent=rna81;Dbxref=ASAP:ABE-0047261,EcoGene:EG31155,GeneID:2847700;Note=identified in a large scale screen;gbkey=ncRNA;gene=glmY;ncrna_class=other;product=sRNA activator of glmS mRNA%2C glmZ processing antagonist NC_000913.3 RefSeq gene 2691656 2695543 . - . ID=gene2622;Dbxref=EcoGene:EG10797,GeneID:947032;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=ECK2555,JW2541,purG,purI;locus_tag=b2557 NC_000913.3 RefSeq CDS 2691656 2695543 . - 0 ID=cds2539;Parent=gene2622;Dbxref=ASAP:ABE-0008412,UniProtKB/Swiss-Prot:P15254,Genbank:YP_026170.1,EcoGene:EG10797,GeneID:947032;Name=YP_026170.1;Note=phosphoribosylformyl-glycineamide synthetase %3D FGAM synthetase;gbkey=CDS;gene=purL;product=phosphoribosylformyl-glycineamide synthetase;protein_id=YP_026170.1;transl_table=11 NC_000913.3 RefSeq gene 2695801 2697357 . + . ID=gene2623;Dbxref=EcoGene:EG11373,GeneID:947028;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;gene_synonym=ECK2556,JW2542,yfhD;locus_tag=b2558 NC_000913.3 RefSeq CDS 2695801 2697357 . + 0 ID=cds2540;Parent=gene2623;Dbxref=ASAP:ABE-0008417,UniProtKB/Swiss-Prot:P0AGC5,Genbank:NP_417053.2,EcoGene:EG11373,GeneID:947028;Name=NP_417053.2;Note=putative periplasmic binding transport protein;gbkey=CDS;gene=mltF;product=membrane-bound lytic transglycosylase F%2C murein hydrolase;protein_id=NP_417053.2;transl_table=11 NC_000913.3 RefSeq gene 2697354 2697857 . - . ID=gene2624;Dbxref=EcoGene:EG11372,GeneID:947027;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;gene_synonym=ECK2557,JW2543,yfhC;locus_tag=b2559 NC_000913.3 RefSeq CDS 2697354 2697857 . - 0 ID=cds2541;Parent=gene2624;Dbxref=ASAP:ABE-0008419,UniProtKB/Swiss-Prot:P68398,Genbank:NP_417054.2,EcoGene:EG11372,GeneID:947027;Name=NP_417054.2;gbkey=CDS;gene=tadA;product=tRNA-specific adenosine deaminase;protein_id=NP_417054.2;transl_table=11 NC_000913.3 RefSeq gene 2697915 2698550 . - . ID=gene2625;Dbxref=EcoGene:EG11371,GeneID:947026;Name=pgpC;gbkey=Gene;gene=pgpC;gene_biotype=protein_coding;gene_synonym=ECK2558,JW5408,yfhB;locus_tag=b2560 NC_000913.3 RefSeq CDS 2697915 2698550 . - 0 ID=cds2542;Parent=gene2625;Dbxref=ASAP:ABE-0008421,UniProtKB/Swiss-Prot:P0AD42,Genbank:NP_417055.4,EcoGene:EG11371,GeneID:947026;Name=NP_417055.4;gbkey=CDS;gene=pgpC;product=phosphatidylglycerophosphatase C%2C membrane bound;protein_id=NP_417055.4;transl_table=11 NC_000913.3 RefSeq gene 2698759 2699607 . + . ID=gene2626;Dbxref=EcoGene:EG12308,GeneID:947030;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;gene_synonym=ECK2559,JW2545;locus_tag=b2561 NC_000913.3 RefSeq CDS 2698759 2699607 . + 0 ID=cds2543;Parent=gene2626;Dbxref=ASAP:ABE-0008428,UniProtKB/Swiss-Prot:P37767,Genbank:NP_417056.2,EcoGene:EG12308,GeneID:947030;Name=NP_417056.2;gbkey=CDS;gene=yfhH;product=putative DNA-binding transcriptional regulator;protein_id=NP_417056.2;transl_table=11 NC_000913.3 RefSeq gene 2699663 2699923 . + . ID=gene2627;Dbxref=EcoGene:EG13215,GeneID:947031;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;gene_synonym=ECK2560,JW2546;locus_tag=b2562 NC_000913.3 RefSeq CDS 2699663 2699923 . + 0 ID=cds2544;Parent=gene2627;Dbxref=ASAP:ABE-0008431,UniProtKB/Swiss-Prot:P52102,Genbank:NP_417057.1,EcoGene:EG13215,GeneID:947031;Name=NP_417057.1;gbkey=CDS;gene=yfhL;product=putative 4Fe-4S cluster-containing protein;protein_id=NP_417057.1;transl_table=11 NC_000913.3 RefSeq gene 2700117 2700197 . - . ID=gene2628;Dbxref=EcoGene:EG14494,GeneID:7751620;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;gene_synonym=ECK4502,ryfB,yphI;locus_tag=b4687 NC_000913.3 RefSeq CDS 2700117 2700197 . - 0 ID=cds2545;Parent=gene2628;Dbxref=UniProtKB/Swiss-Prot:C1P611,Genbank:YP_002791251.1,EcoGene:EG14494,GeneID:7751620;Name=YP_002791251.1;gbkey=CDS;gene=shoB;product=toxic membrane protein;protein_id=YP_002791251.1;transl_table=11 NC_000913.3 RefSeq gene 2700520 2700596 . + . ID=gene2629;Dbxref=EcoGene:EG31178,GeneID:5061518;Name=ohsC;gbkey=Gene;gene=ohsC;gene_biotype=antisense_RNA;gene_synonym=ECK4417,ryfC;locus_tag=b4608 NC_000913.3 RefSeq ncRNA 2700520 2700596 . + . ID=rna82;Parent=gene2629;Dbxref=EcoGene:EG31178,GeneID:5061518;gbkey=ncRNA;gene=ohsC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of shoB toxin NC_000913.3 RefSeq exon 2700520 2700596 . + . ID=id314;Parent=rna82;Dbxref=EcoGene:EG31178,GeneID:5061518;gbkey=ncRNA;gene=ohsC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of shoB toxin NC_000913.3 RefSeq gene 2700618 2700998 . - . ID=gene2630;Dbxref=EcoGene:EG10247,GeneID:947037;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;gene_synonym=dpj,ECK2561,JW2547;locus_tag=b2563 NC_000913.3 RefSeq CDS 2700618 2700998 . - 0 ID=cds2546;Parent=gene2630;Dbxref=ASAP:ABE-0008433,UniProtKB/Swiss-Prot:P24224,Genbank:NP_417058.1,EcoGene:EG10247,GeneID:947037;Name=NP_417058.1;Note=CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase;gbkey=CDS;gene=acpS;product=holo-[acyl-carrier-protein] synthase 1;protein_id=NP_417058.1;transl_table=11 NC_000913.3 RefSeq gene 2700998 2701729 . - . ID=gene2631;Dbxref=EcoGene:EG10693,GeneID:947039;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;gene_synonym=ECK2562,JW2548;locus_tag=b2564 NC_000913.3 RefSeq CDS 2700998 2701729 . - 0 ID=cds2547;Parent=gene2631;Dbxref=ASAP:ABE-0008435,UniProtKB/Swiss-Prot:P0A794,Genbank:NP_417059.1,EcoGene:EG10693,GeneID:947039;Name=NP_417059.1;Note=pyridoxine biosynthesis;gbkey=CDS;gene=pdxJ;product=pyridoxine 5'-phosphate synthase;protein_id=NP_417059.1;transl_table=11 NC_000913.3 RefSeq gene 2701741 2702469 . - . ID=gene2632;Dbxref=EcoGene:EG10832,GeneID:947038;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;gene_synonym=ECK2563,JW2549;locus_tag=b2565 NC_000913.3 RefSeq CDS 2701741 2702469 . - 0 ID=cds2548;Parent=gene2632;Dbxref=ASAP:ABE-0008438,UniProtKB/Swiss-Prot:P0A7H3,Genbank:NP_417060.1,EcoGene:EG10832,GeneID:947038;Name=NP_417060.1;Note=protein interacts with RecR and possibly RecF proteins;gbkey=CDS;gene=recO;product=gap repair protein;protein_id=NP_417060.1;transl_table=11 NC_000913.3 RefSeq gene 2702481 2703386 . - . ID=gene2633;Dbxref=EcoGene:EG10270,GeneID:947036;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;gene_synonym=ECK2564,JW2550,sdgE;locus_tag=b2566 NC_000913.3 RefSeq CDS 2702481 2703386 . - 0 ID=cds2549;Parent=gene2633;Dbxref=ASAP:ABE-0008440,UniProtKB/Swiss-Prot:P06616,Genbank:NP_417061.1,EcoGene:EG10270,GeneID:947036;Name=NP_417061.1;Note=GTP-binding protein;gbkey=CDS;gene=era;product=membrane-associated%2C 16S rRNA-binding GTPase;protein_id=NP_417061.1;transl_table=11 NC_000913.3 RefSeq gene 2703383 2704063 . - . ID=gene2634;Dbxref=EcoGene:EG10857,GeneID:947033;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;gene_synonym=ECK2565,JW2551,ranA;locus_tag=b2567 NC_000913.3 RefSeq CDS 2703383 2704063 . - 0 ID=cds2550;Parent=gene2634;Dbxref=ASAP:ABE-0008448,UniProtKB/Swiss-Prot:P0A7Y0,Genbank:NP_417062.1,EcoGene:EG10857,GeneID:947033;Name=NP_417062.1;Note=RNase III%2C ds RNA;gbkey=CDS;gene=rnc;product=RNase III;protein_id=NP_417062.1;transl_table=11 NC_000913.3 RefSeq gene 2704335 2705309 . - . ID=gene2635;Dbxref=EcoGene:EG10530,GeneID:947040;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;gene_synonym=ECK2566,JW2552,lep;locus_tag=b2568 NC_000913.3 RefSeq CDS 2704335 2705309 . - 0 ID=cds2551;Parent=gene2635;Dbxref=ASAP:ABE-0008450,UniProtKB/Swiss-Prot:P00803,Genbank:NP_417063.1,EcoGene:EG10530,GeneID:947040;Name=NP_417063.1;gbkey=CDS;gene=lepB;product=leader peptidase (signal peptidase I);protein_id=NP_417063.1;transl_table=11 NC_000913.3 RefSeq gene 2705325 2707124 . - . ID=gene2636;Dbxref=EcoGene:EG10529,GeneID:947051;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;gene_synonym=ECK2567,JW2553;locus_tag=b2569 NC_000913.3 RefSeq CDS 2705325 2707124 . - 0 ID=cds2552;Parent=gene2636;Dbxref=ASAP:ABE-0008452,UniProtKB/Swiss-Prot:P60785,Genbank:NP_417064.1,EcoGene:EG10529,GeneID:947051;Name=NP_417064.1;Note=GTP-binding elongation factor%2C may be inner membrane protein;gbkey=CDS;gene=lepA;product=back-translocating elongation factor EF4%2C GTPase;protein_id=NP_417064.1;transl_table=11 NC_000913.3 RefSeq gene 2707322 2707801 . - . ID=gene2637;Dbxref=EcoGene:EG13178,GeneID:947052;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;gene_synonym=ECK2568,JW2554;locus_tag=b2570 NC_000913.3 RefSeq CDS 2707322 2707801 . - 0 ID=cds2553;Parent=gene2637;Dbxref=ASAP:ABE-0008457,UniProtKB/Swiss-Prot:P46187,Genbank:NP_417065.1,EcoGene:EG13178,GeneID:947052;Name=NP_417065.1;Note=sigma-E factor%2C negative regulatory protein;gbkey=CDS;gene=rseC;product=SoxR iron-sulfur cluster reduction factor component;protein_id=NP_417065.1;transl_table=11 NC_000913.3 RefSeq gene 2707798 2708754 . - . ID=gene2638;Dbxref=EcoGene:EG13177,GeneID:947054;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;gene_synonym=ECK2569,JW2555;locus_tag=b2571 NC_000913.3 RefSeq CDS 2707798 2708754 . - 0 ID=cds2554;Parent=gene2638;Dbxref=ASAP:ABE-0008459,UniProtKB/Swiss-Prot:P0AFX9,Genbank:NP_417066.1,EcoGene:EG13177,GeneID:947054;Name=NP_417066.1;Note=regulates activity of sigma-E factor;gbkey=CDS;gene=rseB;product=anti-sigma E factor%2C binds RseA;protein_id=NP_417066.1;transl_table=11 NC_000913.3 RefSeq gene 2708754 2709404 . - . ID=gene2639;Dbxref=EcoGene:EG12341,GeneID:947053;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;gene_synonym=ECK2570,JW2556,mclA,yfiJ;locus_tag=b2572 NC_000913.3 RefSeq CDS 2708754 2709404 . - 0 ID=cds2555;Parent=gene2639;Dbxref=ASAP:ABE-0008462,UniProtKB/Swiss-Prot:P0AFX7,Genbank:NP_417067.1,EcoGene:EG12341,GeneID:947053;Name=NP_417067.1;Note=sigma-E factor%2C negative regulatory protein;gbkey=CDS;gene=rseA;product=anti-sigma factor;protein_id=NP_417067.1;transl_table=11 NC_000913.3 RefSeq gene 2709437 2710012 . - . ID=gene2640;Dbxref=EcoGene:EG11897,GeneID:947050;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;gene_synonym=ECK2571,JW2557,sigE;locus_tag=b2573 NC_000913.3 RefSeq CDS 2709437 2710012 . - 0 ID=cds2556;Parent=gene2640;Dbxref=ASAP:ABE-0008467,UniProtKB/Swiss-Prot:P0AGB6,Genbank:NP_417068.1,EcoGene:EG11897,GeneID:947050;Name=NP_417068.1;Note=RNA polymerase%2C sigma-E factor%3B heat shock and oxidative stress;gbkey=CDS;gene=rpoE;product=RNA polymerase sigma E factor;protein_id=NP_417068.1;transl_table=11 NC_000913.3 RefSeq gene 2710420 2712042 . + . ID=gene2641;Dbxref=EcoGene:EG10631,GeneID:947049;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;gene_synonym=ECK2572,JW2558,nic,nicB;locus_tag=b2574 NC_000913.3 RefSeq CDS 2710420 2712042 . + 0 ID=cds2557;Parent=gene2641;Dbxref=ASAP:ABE-0008471,UniProtKB/Swiss-Prot:P10902,Genbank:NP_417069.1,EcoGene:EG10631,GeneID:947049;Name=NP_417069.1;Note=quinolinate synthetase%2C B protein;gbkey=CDS;gene=nadB;product=quinolinate synthase%2C L-aspartate oxidase (B protein) subunit;protein_id=NP_417069.1;transl_table=11 NC_000913.3 RefSeq gene 2712027 2712764 . - . ID=gene2642;Dbxref=EcoGene:EG11538,GeneID:947047;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;gene_synonym=ECK2573,JW2559,trmN6,yfiC;locus_tag=b2575 NC_000913.3 RefSeq CDS 2712027 2712764 . - 0 ID=cds2558;Parent=gene2642;Dbxref=ASAP:ABE-0008473,UniProtKB/Swiss-Prot:P31825,Genbank:NP_417070.2,EcoGene:EG11538,GeneID:947047;Name=NP_417070.2;Note=putative enzyme;gbkey=CDS;gene=trmN;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=NP_417070.2;transl_table=11 NC_000913.3 RefSeq gene 2712896 2714230 . + . ID=gene2643;Dbxref=EcoGene:EG10975,GeneID:947055;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;gene_synonym=ECK2574,JW2560,rbaB,rhlA;locus_tag=b2576 NC_000913.3 RefSeq CDS 2712896 2714230 . + 0 ID=cds2559;Parent=gene2643;Dbxref=ASAP:ABE-0008478,UniProtKB/Swiss-Prot:P21507,Genbank:NP_417071.1,EcoGene:EG10975,GeneID:947055;Name=NP_417071.1;gbkey=CDS;gene=srmB;product=ATP-dependent RNA helicase;protein_id=NP_417071.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2714283 2714380 . + . ID=id315;Note=RIP188 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2714439 2715320 . - . ID=gene2644;Dbxref=EcoGene:EG11785,GeneID:947064;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;gene_synonym=ECK2575,JW2561;locus_tag=b2577 NC_000913.3 RefSeq CDS 2714439 2715320 . - 0 ID=cds2560;Parent=gene2644;Dbxref=ASAP:ABE-0008483,UniProtKB/Swiss-Prot:P33634,Genbank:NP_417072.4,EcoGene:EG11785,GeneID:947064;Name=NP_417072.4;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yfiE;product=putative DNA-binding transcriptional regulator;protein_id=NP_417072.4;transl_table=11 NC_000913.3 RefSeq gene 2715423 2716010 . + . ID=gene2645;Dbxref=EcoGene:EG12445,GeneID:947065;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;gene_synonym=ECK2576,JW2562,yfiK;locus_tag=b2578 NC_000913.3 RefSeq CDS 2715423 2716010 . + 0 ID=cds2561;Parent=gene2645;Dbxref=ASAP:ABE-0008487,UniProtKB/Swiss-Prot:P38101,Genbank:NP_417073.1,EcoGene:EG12445,GeneID:947065;Name=NP_417073.1;gbkey=CDS;gene=eamB;product=cysteine and O-acetylserine exporter;protein_id=NP_417073.1;transl_table=11 NC_000913.3 RefSeq gene 2716066 2716449 . - . ID=gene2646;Dbxref=EcoGene:EG11784,GeneID:947068;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;gene_synonym=ECK2577,JW2563,yfiD;locus_tag=b2579 NC_000913.3 RefSeq CDS 2716066 2716449 . - 0 ID=cds2562;Parent=gene2646;Dbxref=ASAP:ABE-0008489,UniProtKB/Swiss-Prot:P68066,Genbank:NP_417074.1,EcoGene:EG11784,GeneID:947068;Name=NP_417074.1;Note=putative formate acetyltransferase;gbkey=CDS;gene=grcA;product=autonomous glycyl radical cofactor;protein_id=NP_417074.1;transl_table=11 NC_000913.3 RefSeq gene 2716754 2717443 . + . ID=gene2647;Dbxref=EcoGene:EG11058,GeneID:947067;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;gene_synonym=ECK2578,JW2564;locus_tag=b2580 NC_000913.3 RefSeq CDS 2716754 2717443 . + 0 ID=cds2563;Parent=gene2647;Dbxref=ASAP:ABE-0008495,UniProtKB/Swiss-Prot:P12295,Genbank:NP_417075.1,EcoGene:EG11058,GeneID:947067;Name=NP_417075.1;gbkey=CDS;gene=ung;product=uracil-DNA-glycosylase;protein_id=NP_417075.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2717458 2717483 . + . ID=id316;Note=REP189 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2717491 2718528 . - . ID=gene2648;Dbxref=EcoGene:EG11786,GeneID:947066;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;gene_synonym=ECK2579,JW2565;locus_tag=b2581 NC_000913.3 RefSeq CDS 2717491 2718528 . - 0 ID=cds2564;Parent=gene2648;Dbxref=ASAP:ABE-0008497,UniProtKB/Swiss-Prot:P0AGJ5,Genbank:NP_417076.1,EcoGene:EG11786,GeneID:947066;Name=NP_417076.1;gbkey=CDS;gene=yfiF;product=putative methyltransferase;protein_id=NP_417076.1;transl_table=11 NC_000913.3 RefSeq gene 2718735 2719154 . + . ID=gene2649;Dbxref=EcoGene:EG11887,GeneID:947062;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;gene_synonym=ECK2580,JW2566,yfiG;locus_tag=b2582 NC_000913.3 RefSeq CDS 2718735 2719154 . + 0 ID=cds2565;Parent=gene2649;Dbxref=ASAP:ABE-0008501,UniProtKB/Swiss-Prot:P0AGG4,Genbank:NP_417077.1,EcoGene:EG11887,GeneID:947062;Name=NP_417077.1;Note=putative thioredoxin-like protein;gbkey=CDS;gene=trxC;product=thioredoxin 2;protein_id=NP_417077.1;transl_table=11 NC_000913.3 RefSeq gene 2719223 2719921 . + . ID=gene2650;Dbxref=EcoGene:EG14223,GeneID:947057;Name=yfiP;gbkey=Gene;gene=yfiP;gene_biotype=protein_coding;gene_synonym=ECK2581,JW5409;locus_tag=b2583 NC_000913.3 RefSeq CDS 2719223 2719921 . + 0 ID=cds2566;Parent=gene2650;Dbxref=ASAP:ABE-0008503,UniProtKB/Swiss-Prot:Q47319,Genbank:NP_417078.4,EcoGene:EG14223,GeneID:947057;Name=NP_417078.4;gbkey=CDS;gene=yfiP;product=DTW domain protein;protein_id=NP_417078.4;transl_table=11 NC_000913.3 RefSeq gene 2719953 2722613 . + . ID=gene2651;Dbxref=EcoGene:EG14224,GeneID:947056;Name=pka;gbkey=Gene;gene=pka;gene_biotype=protein_coding;gene_synonym=ECK2582,JW2568,pat,patZ,yfiQ;locus_tag=b2584 NC_000913.3 RefSeq CDS 2719953 2722613 . + 0 ID=cds2567;Parent=gene2651;Dbxref=ASAP:ABE-0008506,UniProtKB/Swiss-Prot:P76594,Genbank:NP_417079.1,EcoGene:EG14224,GeneID:947056;Name=NP_417079.1;gbkey=CDS;gene=pka;product=protein lysine acetyltransferase;protein_id=NP_417079.1;transl_table=11 NC_000913.3 RefSeq gene 2722727 2724082 . + . ID=gene2652;Dbxref=EcoGene:EG10781,GeneID:947059;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;gene_synonym=ECK2583,JW2569,pss;locus_tag=b2585 NC_000913.3 RefSeq CDS 2722727 2724082 . + 0 ID=cds2568;Parent=gene2652;Dbxref=ASAP:ABE-0008510,UniProtKB/Swiss-Prot:P23830,Genbank:NP_417080.4,EcoGene:EG10781,GeneID:947059;Name=NP_417080.4;Note=phosphatidylserine synthase%3B phospholipid synthesis;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase%3B CDP-diacylglycerol-serine O-phosphatidyltransferase;protein_id=NP_417080.4;transl_table=11 NC_000913.3 RefSeq gene 2724128 2724451 . + . ID=gene2653;Dbxref=EcoGene:EG12857,GeneID:947060;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;gene_synonym=ECK2584,JW2570;locus_tag=b2586 NC_000913.3 RefSeq CDS 2724128 2724451 . + 0 ID=cds2569;Parent=gene2653;Dbxref=ASAP:ABE-0008513,UniProtKB/Swiss-Prot:P46126,Genbank:NP_417081.2,EcoGene:EG12857,GeneID:947060;Name=NP_417081.2;gbkey=CDS;gene=yfiM;product=putative lipoprotein;protein_id=NP_417081.2;transl_table=11 NC_000913.3 RefSeq gene 2724448 2725746 . - . ID=gene2654;Dbxref=EcoGene:EG10522,GeneID:947069;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;gene_synonym=ECK2585,JW2571,witA;locus_tag=b2587 NC_000913.3 RefSeq CDS 2724448 2725746 . - 0 ID=cds2570;Parent=gene2654;Dbxref=ASAP:ABE-0008515,UniProtKB/Swiss-Prot:P0AEX3,Genbank:NP_417082.1,EcoGene:EG10522,GeneID:947069;Name=NP_417082.1;Note=alpha-ketoglutarate permease;gbkey=CDS;gene=kgtP;product=alpha-ketoglutarate transporter;protein_id=NP_417082.1;transl_table=11 NC_000913.3 RefSeq gene 2726069 2726188 . - . ID=gene2655;Dbxref=EcoGene:EG30075,GeneID:947070;Name=rrfG;gbkey=Gene;gene=rrfG;gene_biotype=rRNA;gene_synonym=ECK2586,JWR0051;locus_tag=b2588 NC_000913.3 RefSeq rRNA 2726069 2726188 . - . ID=rna83;Parent=gene2655;Dbxref=ASAP:ABE-0008519,EcoGene:EG30075,GeneID:947070;gbkey=rRNA;gene=rrfG;product=5S ribosomal RNA of rrnG operon NC_000913.3 RefSeq exon 2726069 2726188 . - . ID=id317;Parent=rna83;Dbxref=ASAP:ABE-0008519,EcoGene:EG30075,GeneID:947070;gbkey=rRNA;gene=rrfG;product=5S ribosomal RNA of rrnG operon NC_000913.3 RefSeq gene 2726281 2729184 . - . ID=gene2656;Dbxref=EcoGene:EG30082,GeneID:947585;Name=rrlG;gbkey=Gene;gene=rrlG;gene_biotype=rRNA;gene_synonym=ECK2587,JWR0052;locus_tag=b2589 NC_000913.3 RefSeq rRNA 2726281 2729184 . - . ID=rna84;Parent=gene2656;Dbxref=ASAP:ABE-0008521,EcoGene:EG30082,GeneID:947585;gbkey=rRNA;gene=rrlG;product=23S ribosomal RNA of rrnG operon NC_000913.3 RefSeq exon 2726281 2729184 . - . ID=id318;Parent=rna84;Dbxref=ASAP:ABE-0008521,EcoGene:EG30082,GeneID:947585;gbkey=rRNA;gene=rrlG;product=23S ribosomal RNA of rrnG operon NC_000913.3 RefSeq gene 2729369 2729444 . - . ID=gene2657;Dbxref=EcoGene:EG30035,GeneID:947076;Name=gltW;gbkey=Gene;gene=gltW;gene_biotype=tRNA;gene_synonym=ECK2588,JWR0053;locus_tag=b2590 NC_000913.3 RefSeq tRNA 2729369 2729444 . - . ID=rna85;Parent=gene2657;Dbxref=ASAP:ABE-0008523,EcoGene:EG30035,GeneID:947076;Note=anticodon: UUC;gbkey=tRNA;gene=gltW;product=tRNA-Glu NC_000913.3 RefSeq exon 2729369 2729444 . - . ID=id319;Parent=rna85;Dbxref=ASAP:ABE-0008523,EcoGene:EG30035,GeneID:947076;Note=anticodon: UUC;gbkey=tRNA;gene=gltW;product=tRNA-Glu NC_000913.3 RefSeq gene 2729616 2731157 . - . ID=gene2658;Dbxref=EcoGene:EG30089,GeneID:947071;Name=rrsG;gbkey=Gene;gene=rrsG;gene_biotype=rRNA;gene_synonym=ECK2589,JWR0054;locus_tag=b2591 NC_000913.3 RefSeq rRNA 2729616 2731157 . - . ID=rna86;Parent=gene2658;Dbxref=ASAP:ABE-0008525,EcoGene:EG30089,GeneID:947071;gbkey=rRNA;gene=rrsG;product=16S ribosomal RNA of rrnG operon NC_000913.3 RefSeq exon 2729616 2731157 . - . ID=id320;Parent=rna86;Dbxref=ASAP:ABE-0008525,EcoGene:EG30089,GeneID:947071;gbkey=rRNA;gene=rrsG;product=16S ribosomal RNA of rrnG operon NC_000913.3 RefSeq gene 2731600 2734173 . - . ID=gene2659;Dbxref=EcoGene:EG10157,GeneID:947077;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;gene_synonym=ECK2590,htpM,JW2573;locus_tag=b2592 NC_000913.3 RefSeq CDS 2731600 2734173 . - 0 ID=cds2571;Parent=gene2659;Dbxref=ASAP:ABE-0008527,UniProtKB/Swiss-Prot:P63284,Genbank:NP_417083.1,EcoGene:EG10157,GeneID:947077;Name=NP_417083.1;Note=heat shock protein;gbkey=CDS;gene=clpB;product=protein disaggregation chaperone;protein_id=NP_417083.1;transl_table=11 NC_000913.3 RefSeq gene 2734153 2734295 . - . ID=gene2660;Dbxref=EcoGene:EG31179,GeneID:5061506;Name=ryfD;gbkey=Gene;gene=ryfD;gene_biotype=ncRNA;gene_synonym=ECK4418;locus_tag=b4609 NC_000913.3 RefSeq ncRNA 2734153 2734295 . - . ID=rna87;Parent=gene2660;Dbxref=EcoGene:EG31179,GeneID:5061506;gbkey=ncRNA;gene=ryfD;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 2734153 2734295 . - . ID=id321;Parent=rna87;Dbxref=EcoGene:EG31179,GeneID:5061506;gbkey=ncRNA;gene=ryfD;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 2734303 2735034 . - . ID=gene2661;Dbxref=EcoGene:EG12097,GeneID:947089;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;gene_synonym=ECK2591,JW2575;locus_tag=b2593 NC_000913.3 RefSeq CDS 2734303 2735034 . - 0 ID=cds2572;Parent=gene2661;Dbxref=ASAP:ABE-0008530,UniProtKB/Swiss-Prot:P33644,Genbank:NP_417084.1,EcoGene:EG12097,GeneID:947089;Name=NP_417084.1;gbkey=CDS;gene=yfiH;product=UPF0124 family protein;protein_id=NP_417084.1;transl_table=11 NC_000913.3 RefSeq gene 2735031 2736011 . - . ID=gene2662;Dbxref=EcoGene:EG12098,GeneID:947087;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;gene_synonym=ECK2592,JW2576,sfhB,yfiI;locus_tag=b2594 NC_000913.3 RefSeq CDS 2735031 2736011 . - 0 ID=cds2573;Parent=gene2662;Dbxref=ASAP:ABE-0008532,UniProtKB/Swiss-Prot:P33643,Genbank:NP_417085.1,EcoGene:EG12098,GeneID:947087;Name=NP_417085.1;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridine(1911%2C1915%2C1917) synthase;protein_id=NP_417085.1;transl_table=11 NC_000913.3 RefSeq gene 2736146 2736883 . + . ID=gene2663;Dbxref=EcoGene:EG14222,GeneID:947086;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;gene_synonym=ecfD,ECK2593,JW2577,yfiO;locus_tag=b2595 NC_000913.3 RefSeq CDS 2736146 2736883 . + 0 ID=cds2574;Parent=gene2663;Dbxref=ASAP:ABE-0008536,UniProtKB/Swiss-Prot:P0AC02,Genbank:NP_417086.1,EcoGene:EG14222,GeneID:947086;Name=NP_417086.1;gbkey=CDS;gene=bamD;product=BamABCDE complex OM biogenesis lipoprotein;protein_id=NP_417086.1;transl_table=11 NC_000913.3 RefSeq gene 2737154 2737495 . + . ID=gene2664;Dbxref=EcoGene:EG11151,GeneID:947129;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;gene_synonym=ECK2594,JW2578,yfiA;locus_tag=b2597 NC_000913.3 RefSeq CDS 2737154 2737495 . + 0 ID=cds2575;Parent=gene2664;Dbxref=ASAP:ABE-0008540,UniProtKB/Swiss-Prot:P0AD49,Genbank:NP_417088.1,EcoGene:EG11151,GeneID:947129;Name=NP_417088.1;Note=putative yhbH sigma 54 modulator;gbkey=CDS;gene=raiA;product=cold shock protein associated with 30S ribosomal subunit;protein_id=NP_417088.1;transl_table=11 NC_000913.3 RefSeq gene 2737599 2737646 . + . ID=gene2665;Dbxref=EcoGene:EG11271,GeneID:947080;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;gene_synonym=ECK2595,JW2579,pheAE;locus_tag=b2598 NC_000913.3 RefSeq CDS 2737599 2737646 . + 0 ID=cds2576;Parent=gene2665;Dbxref=ASAP:ABE-0008543,UniProtKB/Swiss-Prot:P0AD72,Genbank:NP_417089.1,EcoGene:EG11271,GeneID:947080;Name=NP_417089.1;Note=leader peptide of chorismate mutase-P-prephenate dehydratase;gbkey=CDS;gene=pheL;product=pheA gene leader peptide;protein_id=NP_417089.1;transl_table=11 NC_000913.3 RefSeq gene 2737745 2738905 . + . ID=gene2666;Dbxref=EcoGene:EG10707,GeneID:947081;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;gene_synonym=ECK2596,JW2580;locus_tag=b2599 NC_000913.3 RefSeq CDS 2737745 2738905 . + 0 ID=cds2577;Parent=gene2666;Dbxref=ASAP:ABE-0008545,UniProtKB/Swiss-Prot:P0A9J8,Genbank:NP_417090.1,EcoGene:EG10707,GeneID:947081;Name=NP_417090.1;Note=chorismate mutase-P and prephenate dehydratase;gbkey=CDS;gene=pheA;product=chorismate mutase and prephenate dehydratase%2C P-protein;protein_id=NP_417090.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2738915 2738938 . + . ID=id322;Note=REP190 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2738948 2740069 . - . ID=gene2667;Dbxref=EcoGene:EG11039,GeneID:947115;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;gene_synonym=ECK2597,JW2581;locus_tag=b2600 NC_000913.3 RefSeq CDS 2738948 2740069 . - 0 ID=cds2578;Parent=gene2667;Dbxref=ASAP:ABE-0008547,UniProtKB/Swiss-Prot:P07023,Genbank:NP_417091.1,EcoGene:EG11039,GeneID:947115;Name=NP_417091.1;Note=chorismate mutase-T and prephenate dehydrogenase;gbkey=CDS;gene=tyrA;product=fused chorismate mutase T/prephenate dehydrogenase;protein_id=NP_417091.1;transl_table=11 NC_000913.3 RefSeq gene 2740080 2741150 . - . ID=gene2668;Dbxref=EcoGene:EG10078,GeneID:947084;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;gene_synonym=ECK2598,JW2582;locus_tag=b2601 NC_000913.3 RefSeq CDS 2740080 2741150 . - 0 ID=cds2579;Parent=gene2668;Dbxref=ASAP:ABE-0008549,UniProtKB/Swiss-Prot:P00888,Genbank:NP_417092.1,EcoGene:EG10078,GeneID:947084;Name=NP_417092.1;Note=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase%2C tyrosine repressible);gbkey=CDS;gene=aroF;product=3-deoxy-D-arabino-heptulosonate-7-phosphate synthase%2C tyrosine-repressible;protein_id=NP_417092.1;transl_table=11 NC_000913.3 RefSeq gene 2741360 2741725 . + . ID=gene2669;Dbxref=EcoGene:EG12446,GeneID:947106;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;gene_synonym=ECK2599,JW5412;locus_tag=b2602 NC_000913.3 RefSeq CDS 2741360 2741725 . + 0 ID=cds2580;Parent=gene2669;Dbxref=ASAP:ABE-0008565,UniProtKB/Swiss-Prot:P11289,Genbank:NP_417093.2,EcoGene:EG12446,GeneID:947106;Name=NP_417093.2;gbkey=CDS;gene=yfiL;product=lipoprotein;protein_id=NP_417093.2;transl_table=11 NC_000913.3 RefSeq gene 2741875 2742393 . + . ID=gene2670;Dbxref=EcoGene:EG14225,GeneID:947090;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;gene_synonym=ECK2600,JW2584;locus_tag=b2603 NC_000913.3 RefSeq CDS 2741875 2742393 . + 0 ID=cds2581;Parent=gene2670;Dbxref=ASAP:ABE-0008568,UniProtKB/Swiss-Prot:P64548,Genbank:NP_417094.1,EcoGene:EG14225,GeneID:947090;Name=NP_417094.1;gbkey=CDS;gene=yfiR;product=putative periplasmic inhibitor of YfiN activity;protein_id=NP_417094.1;transl_table=11 NC_000913.3 RefSeq gene 2742383 2743609 . + . ID=gene2671;Dbxref=EcoGene:EG12880,GeneID:947091;Name=yfiN;gbkey=Gene;gene=yfiN;gene_biotype=protein_coding;gene_synonym=ECK2601,JW2585;locus_tag=b2604 NC_000913.3 RefSeq CDS 2742383 2743609 . + 0 ID=cds2582;Parent=gene2671;Dbxref=ASAP:ABE-0008570,UniProtKB/Swiss-Prot:P46139,Genbank:NP_417095.1,EcoGene:EG12880,GeneID:947091;Name=NP_417095.1;gbkey=CDS;gene=yfiN;product=putative membrane-anchored diguanylate cyclase;protein_id=NP_417095.1;transl_table=11 NC_000913.3 RefSeq gene 2743625 2744107 . + . ID=gene2672;Dbxref=EcoGene:EG11152,GeneID:947094;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;gene_synonym=ECK2602,JW2586;locus_tag=b2605 NC_000913.3 RefSeq CDS 2743625 2744107 . + 0 ID=cds2583;Parent=gene2672;Dbxref=ASAP:ABE-0008572,UniProtKB/Swiss-Prot:P07021,Genbank:NP_417096.1,EcoGene:EG11152,GeneID:947094;Name=NP_417096.1;Note=putative outer membrane protein;gbkey=CDS;gene=yfiB;product=OM lipoprotein putative positive effector of YfiN activity;protein_id=NP_417096.1;transl_table=11 NC_000913.3 RefSeq gene 2744183 2744530 . - . ID=gene2673;Dbxref=EcoGene:EG10880,GeneID:947096;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;gene_synonym=ECK2603,JW2587;locus_tag=b2606 NC_000913.3 RefSeq CDS 2744183 2744530 . - 0 ID=cds2584;Parent=gene2673;Dbxref=ASAP:ABE-0008574,UniProtKB/Swiss-Prot:P0A7K6,Genbank:NP_417097.1,EcoGene:EG10880,GeneID:947096;Name=NP_417097.1;gbkey=CDS;gene=rplS;product=50S ribosomal subunit protein L19;protein_id=NP_417097.1;transl_table=11 NC_000913.3 RefSeq gene 2744572 2745339 . - . ID=gene2674;Dbxref=EcoGene:EG11023,GeneID:947099;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;gene_synonym=ECK2604,JW2588;locus_tag=b2607 NC_000913.3 RefSeq CDS 2744572 2745339 . - 0 ID=cds2585;Parent=gene2674;Dbxref=ASAP:ABE-0008576,UniProtKB/Swiss-Prot:P0A873,Genbank:NP_417098.1,EcoGene:EG11023,GeneID:947099;Name=NP_417098.1;Note=tRNA methyltransferase%3B tRNA (guanine-7-)-methyltransferase;gbkey=CDS;gene=trmD;product=tRNA m(1)G37 methyltransferase%2C SAM-dependent;protein_id=NP_417098.1;transl_table=11 NC_000913.3 RefSeq gene 2745370 2745918 . - . ID=gene2675;Dbxref=EcoGene:EG11153,GeneID:947101;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;gene_synonym=ECK2605,JW5413,yfjA;locus_tag=b2608 NC_000913.3 RefSeq CDS 2745370 2745918 . - 0 ID=cds2586;Parent=gene2675;Dbxref=ASAP:ABE-0008579,UniProtKB/Swiss-Prot:P0A7X6,Genbank:NP_417099.4,EcoGene:EG11153,GeneID:947101;Name=NP_417099.4;gbkey=CDS;gene=rimM;product=ribosome maturation factor;protein_id=NP_417099.4;transl_table=11 NC_000913.3 RefSeq gene 2745937 2746185 . - . ID=gene2676;Dbxref=EcoGene:EG10915,GeneID:947103;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;gene_synonym=ECK2606,JW2590;locus_tag=b2609 NC_000913.3 RefSeq CDS 2745937 2746185 . - 0 ID=cds2587;Parent=gene2676;Dbxref=ASAP:ABE-0008583,UniProtKB/Swiss-Prot:P0A7T3,Genbank:NP_417100.1,EcoGene:EG10915,GeneID:947103;Name=NP_417100.1;gbkey=CDS;gene=rpsP;product=30S ribosomal subunit protein S16;protein_id=NP_417100.1;transl_table=11 NC_000913.3 RefSeq gene 2746434 2747795 . - . ID=gene2677;Dbxref=EcoGene:EG10300,GeneID:947102;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;gene_synonym=ECK2607,JW5414;locus_tag=b2610 NC_000913.3 RefSeq CDS 2746434 2747795 . - 0 ID=cds2588;Parent=gene2677;Dbxref=ASAP:ABE-0008586,UniProtKB/Swiss-Prot:P0AGD7,Genbank:NP_417101.1,EcoGene:EG10300,GeneID:947102;Name=NP_417101.1;Note=GTP-binding export factor binds to signal sequence%2C GTP and RNA;gbkey=CDS;gene=ffh;product=Signal Recognition Particle (SRP) component with 4.5S RNA (ffs);protein_id=NP_417101.1;transl_table=11 NC_000913.3 RefSeq gene 2747962 2748753 . + . ID=gene2678;Dbxref=EcoGene:EG14226,GeneID:947098;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;gene_synonym=corE,ECK2608,JW2592;locus_tag=b2611 NC_000913.3 RefSeq CDS 2747962 2748753 . + 0 ID=cds2589;Parent=gene2678;Dbxref=ASAP:ABE-0008591,UniProtKB/Swiss-Prot:P64432,Genbank:NP_417102.4,EcoGene:EG14226,GeneID:947098;Name=NP_417102.4;gbkey=CDS;gene=ypjD;product=cytochrome c assembly protein family inner membrane protein;protein_id=NP_417102.4;transl_table=11 NC_000913.3 RefSeq gene 2748774 2750060 . + . ID=gene2679;Dbxref=EcoGene:EG12442,GeneID:2847739;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;gene_synonym=corB,corF,ECK2609,JW5415,ypjE;locus_tag=b4461 NC_000913.3 RefSeq CDS 2748774 2750060 . + 0 ID=cds2590;Parent=gene2679;Dbxref=ASAP:ABE-0174111,UniProtKB/Swiss-Prot:P37908,Genbank:YP_026171.3,EcoGene:EG12442,GeneID:2847739;Name=YP_026171.3;Note=putative membrane protein;gbkey=CDS;gene=yfjD;product=UPF0053 family inner membrane protein;protein_id=YP_026171.3;transl_table=11 NC_000913.3 RefSeq gene 2750115 2750708 . - . ID=gene2680;Dbxref=EcoGene:EG10416,GeneID:947097;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;gene_synonym=ECK2610,JW2594;locus_tag=b2614 NC_000913.3 RefSeq CDS 2750115 2750708 . - 0 ID=cds2591;Parent=gene2680;Dbxref=ASAP:ABE-0008598,UniProtKB/Swiss-Prot:P09372,Genbank:NP_417104.1,EcoGene:EG10416,GeneID:947097;Name=NP_417104.1;Note=phage lambda replication%3B host DNA synthesis%3B heat shock protein%3B protein repair;gbkey=CDS;gene=grpE;product=heat shock protein;protein_id=NP_417104.1;transl_table=11 NC_000913.3 RefSeq gene 2750831 2751709 . + . ID=gene2681;Dbxref=EcoGene:EG12192,GeneID:947092;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;gene_synonym=ECK2611,JW2596,yfjB,yfjE;locus_tag=b2615 NC_000913.3 RefSeq CDS 2750831 2751709 . + 0 ID=cds2592;Parent=gene2681;Dbxref=ASAP:ABE-0008603,UniProtKB/Swiss-Prot:P0A7B3,Genbank:NP_417105.1,EcoGene:EG12192,GeneID:947092;Name=NP_417105.1;gbkey=CDS;gene=nadK;product=NAD kinase;protein_id=NP_417105.1;transl_table=11 NC_000913.3 RefSeq gene 2751795 2753456 . + . ID=gene2682;Dbxref=EcoGene:EG10831,GeneID:947105;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;gene_synonym=ECK2612,JW5416,radB;locus_tag=b2616 NC_000913.3 RefSeq CDS 2751795 2753456 . + 0 ID=cds2593;Parent=gene2682;Dbxref=ASAP:ABE-0008611,UniProtKB/Swiss-Prot:P05824,Genbank:YP_026172.1,EcoGene:EG10831,GeneID:947105;Name=YP_026172.1;Note=protein used in recombination and DNA repair;gbkey=CDS;gene=recN;product=recombination and repair protein;protein_id=YP_026172.1;transl_table=11 NC_000913.3 RefSeq gene 2753605 2753946 . + . ID=gene2683;Dbxref=EcoGene:EG10952,GeneID:945583;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;gene_synonym=ECK2613,JW2598,smpA,smqA;locus_tag=b2617 NC_000913.3 RefSeq CDS 2753605 2753946 . + 0 ID=cds2594;Parent=gene2683;Dbxref=ASAP:ABE-0008614,UniProtKB/Swiss-Prot:P0A937,Genbank:NP_417107.2,EcoGene:EG10952,GeneID:945583;Name=NP_417107.2;Note=small membrane protein A;gbkey=CDS;gene=bamE;product=lipoprotein component of BamABCDE OM biogenesis complex;protein_id=NP_417107.2;transl_table=11 NC_000913.3 RefSeq gene 2754008 2754298 . - . ID=gene2684;Dbxref=EcoGene:EG13192,GeneID:945078;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;gene_synonym=ECK2614,JW2599,pasI,yfjF;locus_tag=b2618 NC_000913.3 RefSeq CDS 2754008 2754298 . - 0 ID=cds2595;Parent=gene2684;Dbxref=ASAP:ABE-0008616,UniProtKB/Swiss-Prot:P52119,Genbank:NP_417108.4,EcoGene:EG13192,GeneID:945078;Name=NP_417108.4;gbkey=CDS;gene=ratB;product=UPF0125 family protein;protein_id=NP_417108.4;transl_table=11 NC_000913.3 RefSeq gene 2754288 2754764 . - . ID=gene2685;Dbxref=EcoGene:EG13193,GeneID:945614;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;gene_synonym=ECK2615,JW2600,pasT,yfjG;locus_tag=b2619 NC_000913.3 RefSeq CDS 2754288 2754764 . - 0 ID=cds2596;Parent=gene2685;Dbxref=ASAP:ABE-0008618,UniProtKB/Swiss-Prot:P0AGL5,Genbank:NP_417109.1,EcoGene:EG13193,GeneID:945614;Name=NP_417109.1;gbkey=CDS;gene=ratA;product=toxic UPF0083 family protein inhibitor of 70S ribosome formation;protein_id=NP_417109.1;transl_table=11 NC_000913.3 RefSeq gene 2754896 2755378 . + . ID=gene2686;Dbxref=EcoGene:EG11782,GeneID:947296;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;gene_synonym=ECK2616,JW2601,smqB;locus_tag=b2620 NC_000913.3 RefSeq CDS 2754896 2755378 . + 0 ID=cds2597;Parent=gene2686;Dbxref=ASAP:ABE-0008622,UniProtKB/Swiss-Prot:P0A832,Genbank:NP_417110.1,EcoGene:EG11782,GeneID:947296;Name=NP_417110.1;Note=small protein B;gbkey=CDS;gene=smpB;product=tmRNA-binding trans-translation protein;protein_id=NP_417110.1;transl_table=11 NC_000913.3 RefSeq gene 2755593 2755955 . + . ID=gene2687;Dbxref=EcoGene:EG30100,GeneID:945053;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;gene_synonym=ECK2617,JWR0055,sipB;locus_tag=b2621 NC_000913.3 RefSeq tmRNA 2755593 2755955 . + . ID=rna88;Parent=gene2687;Dbxref=ASAP:ABE-0008624,EcoGene:EG30100,GeneID:945053;Note=acts as tRNA-Ala and mRNA template for tagging proteins resulting from premature transcription termination for degradation%2C a process known as trans-translation;gbkey=tmRNA;gene=ssrA;product=tmRNA%2C 10Sa RNA NC_000913.3 RefSeq exon 2755593 2755955 . + . ID=id323;Parent=rna88;Dbxref=ASAP:ABE-0008624,EcoGene:EG30100,GeneID:945053;Note=acts as tRNA-Ala and mRNA template for tagging proteins resulting from premature transcription termination for degradation%2C a process known as trans-translation;gbkey=tmRNA;gene=ssrA;product=tmRNA%2C 10Sa RNA NC_000913.3 RefSeq region 2755957 2777986 . + . ID=id324;Note=cryptic prophage CP4-57;gbkey=misc_feature NC_000913.3 RefSeq gene 2756159 2757400 . + . ID=gene2688;Dbxref=EcoGene:EG11783,GeneID:946160;Name=intA;gbkey=Gene;gene=intA;gene_biotype=protein_coding;gene_synonym=ECK2618,intX,JW2602,slpA;locus_tag=b2622 NC_000913.3 RefSeq CDS 2756159 2757400 . + 0 ID=cds2598;Parent=gene2688;Dbxref=ASAP:ABE-0008630,UniProtKB/Swiss-Prot:P32053,Genbank:NP_417111.1,EcoGene:EG11783,GeneID:946160;Name=NP_417111.1;Note=prophage CP4-57 integrase;gbkey=CDS;gene=intA;product=CP4-57 prophage%3B integrase;protein_id=NP_417111.1;transl_table=11 NC_000913.3 RefSeq gene 2757644 2758600 . - . ID=gene2689;Dbxref=EcoGene:EG13194,GeneID:946123;Name=yfjH;gbkey=Gene;gene=yfjH;gene_biotype=protein_coding;gene_synonym=ECK2619,JW2603;locus_tag=b2623 NC_000913.3 RefSeq CDS 2757644 2758600 . - 0 ID=cds2599;Parent=gene2689;Dbxref=ASAP:ABE-0008632,UniProtKB/Swiss-Prot:P52123,Genbank:NP_417112.1,EcoGene:EG13194,GeneID:946123;Name=NP_417112.1;Note=putative histone;gbkey=CDS;gene=yfjH;product=CP4-57 prophage%3B uncharacterized protein;protein_id=NP_417112.1;transl_table=11 NC_000913.3 RefSeq gene 2758644 2758856 . + . ID=gene2690;Dbxref=EcoGene:EG12112,GeneID:946758;Name=alpA;gbkey=Gene;gene=alpA;gene_biotype=protein_coding;gene_synonym=ECK2620,JW2604;locus_tag=b2624 NC_000913.3 RefSeq CDS 2758644 2758856 . + 0 ID=cds2600;Parent=gene2690;Dbxref=ASAP:ABE-0008636,UniProtKB/Swiss-Prot:P33997,Genbank:NP_417113.1,EcoGene:EG12112,GeneID:946758;Name=NP_417113.1;Note=prophage CP4-57 regulatory protein alpA;gbkey=CDS;gene=alpA;product=CP4-57 prophage%3B DNA-binding transcriptional activator;protein_id=NP_417113.1;transl_table=11 NC_000913.3 RefSeq gene 2758985 2760394 . + . ID=gene2691;Dbxref=EcoGene:EG13195,GeneID:944764;Name=yfjI;gbkey=Gene;gene=yfjI;gene_biotype=protein_coding;gene_synonym=ECK2621,JW2605;locus_tag=b2625 NC_000913.3 RefSeq CDS 2758985 2760394 . + 0 ID=cds2601;Parent=gene2691;Dbxref=ASAP:ABE-0008643,UniProtKB/Swiss-Prot:P52124,Genbank:NP_417114.1,EcoGene:EG13195,GeneID:944764;Name=NP_417114.1;gbkey=CDS;gene=yfjI;product=CP4-57 prophage%3B uncharacterized protein;protein_id=NP_417114.1;transl_table=11 NC_000913.3 RefSeq gene 2760547 2761173 . + . ID=gene2692;Dbxref=EcoGene:EG13196,GeneID:947112;Name=yfjJ;gbkey=Gene;gene=yfjJ;gene_biotype=protein_coding;gene_synonym=ECK2622,JW2607;locus_tag=b2626 NC_000913.3 RefSeq CDS 2760547 2761173 . + 0 ID=cds2602;Parent=gene2692;Dbxref=ASAP:ABE-0008646,UniProtKB/Swiss-Prot:P52125,Genbank:NP_417115.1,EcoGene:EG13196,GeneID:947112;Name=NP_417115.1;gbkey=CDS;gene=yfjJ;product=CP4-57 prophage%3B uncharacterized protein;protein_id=NP_417115.1;transl_table=11 NC_000913.3 RefSeq gene 2761351 2763540 . - . ID=gene2693;Dbxref=EcoGene:EG13197,GeneID:947111;Name=yfjK;gbkey=Gene;gene=yfjK;gene_biotype=protein_coding;gene_synonym=ECK2623,JW2608;locus_tag=b2627 NC_000913.3 RefSeq CDS 2761351 2763540 . - 0 ID=cds2603;Parent=gene2693;Dbxref=ASAP:ABE-0008648,UniProtKB/Swiss-Prot:P52126,Genbank:NP_417116.1,EcoGene:EG13197,GeneID:947111;Name=NP_417116.1;gbkey=CDS;gene=yfjK;product=radiation resistance protein%3B DEAD/H helicase-like protein%3B CP4-57 putative defective prophage;protein_id=NP_417116.1;transl_table=11 NC_000913.3 RefSeq gene 2763537 2765153 . - . ID=gene2694;Dbxref=EcoGene:EG13198,GeneID:947110;Name=yfjL;gbkey=Gene;gene=yfjL;gene_biotype=protein_coding;gene_synonym=ECK2624,JW2609;locus_tag=b2628 NC_000913.3 RefSeq CDS 2763537 2765153 . - 0 ID=cds2604;Parent=gene2694;Dbxref=ASAP:ABE-0008650,UniProtKB/Swiss-Prot:P52127,Genbank:NP_417117.1,EcoGene:EG13198,GeneID:947110;Name=NP_417117.1;gbkey=CDS;gene=yfjL;product=CP4-57 putative defective prophage%2C DUF4297/DUF1837 polymorphic toxin family protein;protein_id=NP_417117.1;transl_table=11 NC_000913.3 RefSeq gene 2765513 2765776 . - . ID=gene2695;Dbxref=EcoGene:EG13199,GeneID:947108;Name=yfjM;gbkey=Gene;gene=yfjM;gene_biotype=protein_coding;gene_synonym=ECK2625,JW2610;locus_tag=b2629 NC_000913.3 RefSeq CDS 2765513 2765776 . - 0 ID=cds2605;Parent=gene2695;Dbxref=ASAP:ABE-0008654,UniProtKB/Swiss-Prot:P52128,Genbank:NP_417118.1,EcoGene:EG13199,GeneID:947108;Name=NP_417118.1;gbkey=CDS;gene=yfjM;product=CP4-57 prophage%3B uncharacterized protein;protein_id=NP_417118.1;transl_table=11 NC_000913.3 RefSeq gene 2765918 2766991 . + . ID=gene2696;Dbxref=EcoGene:EG13200,GeneID:947107;Name=rnlA;gbkey=Gene;gene=rnlA;gene_biotype=protein_coding;gene_synonym=ECK2626,JW2611,std,yfjN;locus_tag=b2630 NC_000913.3 RefSeq CDS 2765918 2766991 . + 0 ID=cds2606;Parent=gene2696;Dbxref=ASAP:ABE-0008659,UniProtKB/Swiss-Prot:P52129,Genbank:NP_417119.1,EcoGene:EG13200,GeneID:947107;Name=NP_417119.1;Note=putative cell division protein;gbkey=CDS;gene=rnlA;product=CP4-57 prophage%3B RNase LS;protein_id=NP_417119.1;transl_table=11 NC_000913.3 RefSeq gene 2766984 2767355 . + . ID=gene2697;Dbxref=EcoGene:EG13201,GeneID:947113;Name=rnlB;gbkey=Gene;gene=rnlB;gene_biotype=protein_coding;gene_synonym=ECK2627,JW5418,yfjO;locus_tag=b2631 NC_000913.3 RefSeq CDS 2766984 2767355 . + 0 ID=cds2607;Parent=gene2697;Dbxref=ASAP:ABE-0008665,UniProtKB/Swiss-Prot:P52130,Genbank:NP_417120.2,EcoGene:EG13201,GeneID:947113;Name=NP_417120.2;gbkey=CDS;gene=rnlB;product=CP4-57 prophage%3B uncharacterized protein;protein_id=NP_417120.2;transl_table=11 NC_000913.3 RefSeq gene 2767710 2768573 . + . ID=gene2698;Dbxref=EcoGene:EG13202,GeneID:947124;Name=yfjP;gbkey=Gene;gene=yfjP;gene_biotype=protein_coding;gene_synonym=ECK2628,JW5419;locus_tag=b2632 NC_000913.3 RefSeq CDS 2767710 2768573 . + 0 ID=cds2608;Parent=gene2698;Dbxref=ASAP:ABE-0008669,UniProtKB/Swiss-Prot:P52131,Genbank:YP_026173.1,EcoGene:EG13202,GeneID:947124;Name=YP_026173.1;Note=putative GTP-binding protein;gbkey=CDS;gene=yfjP;product=CP4-57 prophage%3B 50S ribosome-binding GTPase family protein;protein_id=YP_026173.1;transl_table=11 NC_000913.3 RefSeq gene 2768665 2769486 . + . ID=gene2699;Dbxref=EcoGene:EG13203,GeneID:947127;Name=yfjQ;gbkey=Gene;gene=yfjQ;gene_biotype=protein_coding;gene_synonym=ECK2629,JW2614;locus_tag=b2633 NC_000913.3 RefSeq CDS 2768665 2769486 . + 0 ID=cds2609;Parent=gene2699;Dbxref=ASAP:ABE-0008673,UniProtKB/Swiss-Prot:P52132,Genbank:NP_417122.1,EcoGene:EG13203,GeneID:947127;Name=NP_417122.1;gbkey=CDS;gene=yfjQ;product=CP4-57 prophage%3B uncharacterized protein;protein_id=NP_417122.1;transl_table=11 NC_000913.3 RefSeq gene 2769703 2770404 . + . ID=gene2700;Dbxref=EcoGene:EG13204,GeneID:947309;Name=yfjR;gbkey=Gene;gene=yfjR;gene_biotype=protein_coding;gene_synonym=ECK2630,JW2615;locus_tag=b2634 NC_000913.3 RefSeq CDS 2769703 2770404 . + 0 ID=cds2610;Parent=gene2700;Dbxref=ASAP:ABE-0008676,UniProtKB/Swiss-Prot:P52133,Genbank:NP_417123.1,EcoGene:EG13204,GeneID:947309;Name=NP_417123.1;gbkey=CDS;gene=yfjR;product=CP4-57 prophage%3B putative DNA-binding transcriptional regulator;protein_id=NP_417123.1;transl_table=11 NC_000913.3 RefSeq gene 2770445 2770681 . + . ID=gene2701;Dbxref=EcoGene:EG14379,GeneID:2847710;Name=ypjK;gbkey=Gene;gene=ypjK;gene_biotype=protein_coding;gene_synonym=ECK2631,JW5888;locus_tag=b2635 NC_000913.3 RefSeq CDS 2770445 2770681 . + 0 ID=cds2611;Parent=gene2701;Dbxref=ASAP:ABE-0008678,UniProtKB/Swiss-Prot:P52134,Genbank:YP_026174.2,EcoGene:EG14379,GeneID:2847710;Name=YP_026174.2;gbkey=CDS;gene=ypjK;product=CP4-57 prophage%3B putative inner membrane protein;protein_id=YP_026174.2;transl_table=11 NC_000913.3 RefSeq gene 2770681 2771124 . + . ID=gene2702;Dbxref=EcoGene:EG13205,GeneID:945668;Name=yfjS;gbkey=Gene;gene=yfjS;gene_biotype=protein_coding;gene_synonym=ECK2632,JW5921;locus_tag=b2636 NC_000913.3 RefSeq CDS 2770681 2771124 . + 0 ID=cds2612;Parent=gene2702;Dbxref=ASAP:ABE-0008680,UniProtKB/Swiss-Prot:O52982,Genbank:NP_417124.4,EcoGene:EG13205,GeneID:945668;Name=NP_417124.4;gbkey=CDS;gene=yfjS;product=CP4-57 prophage%3B uncharacterized protein;protein_id=NP_417124.4;transl_table=11 NC_000913.3 RefSeq gene 2771148 2771615 . + . ID=gene2703;Dbxref=EcoGene:EG13206,GeneID:947616;Name=yfjT;gbkey=Gene;gene=yfjT;gene_biotype=protein_coding;gene_synonym=ECK2633,JW2618;locus_tag=b2637 NC_000913.3 RefSeq CDS 2771148 2771615 . + 0 ID=cds2613;Parent=gene2703;Dbxref=ASAP:ABE-0008683,UniProtKB/Swiss-Prot:P52135,Genbank:NP_417125.1,EcoGene:EG13206,GeneID:947616;Name=NP_417125.1;gbkey=CDS;gene=yfjT;product=CP4-57 prophage%3B putative periplasmic protein;protein_id=NP_417125.1;transl_table=11 NC_000913.3 RefSeq gene 2772002 2772154 . - . ID=gene2704;Dbxref=EcoGene:EG13207,GeneID:945062;Name=yfjU;gbkey=Gene;gene=yfjU;gene_biotype=pseudogene;gene_synonym=ECK2634,JW2619;locus_tag=b2638;pseudo=true NC_000913.3 RefSeq CDS 2772002 2772154 . - 0 ID=cds2614;Parent=gene2704;Dbxref=ASAP:ABE-0008685,UniProtKB/Swiss-Prot:P0CF86,EcoGene:EG13207,GeneID:945062;Note=CP4-57 prophage%3B conserved protein%3BPhage or Prophage Related;gbkey=CDS;gene=yfjU;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2772167 2773182 . - . ID=gene2705;Dbxref=EcoGene:EG13208,GeneID:947563;Name=yfjV;gbkey=Gene;gene=yfjV;gene_biotype=pseudogene;gene_synonym=ECK2635,JW5922,ypjL,ypjM;locus_tag=b2641;pseudo=true NC_000913.3 RefSeq CDS 2773066 2773182 . - 0 ID=cds2615;Parent=gene2705;Dbxref=ASAP:ABE-0008687,ASAP:ABE-0008690,ASAP:ABE-0008692,UniProtKB/Swiss-Prot:P52137,EcoGene:EG13208,GeneID:947563;Note=pseudogene%2C CP4-57 prophage%3BPhage or Prophage Related~putative pump protein;gbkey=CDS;gene=yfjV;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2772167 2773066 . - 0 ID=cds2615;Parent=gene2705;Dbxref=ASAP:ABE-0008687,ASAP:ABE-0008690,ASAP:ABE-0008692,UniProtKB/Swiss-Prot:P52137,EcoGene:EG13208,GeneID:947563;Note=pseudogene%2C CP4-57 prophage%3BPhage or Prophage Related~putative pump protein;gbkey=CDS;gene=yfjV;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2773318 2775021 . + . ID=gene2706;Dbxref=EcoGene:EG13209,GeneID:947128;Name=yfjW;gbkey=Gene;gene=yfjW;gene_biotype=protein_coding;gene_synonym=ECK2638,JW2623;locus_tag=b2642 NC_000913.3 RefSeq CDS 2773318 2775021 . + 0 ID=cds2616;Parent=gene2706;Dbxref=ASAP:ABE-0008699,UniProtKB/Swiss-Prot:P52138,Genbank:NP_417129.1,EcoGene:EG13209,GeneID:947128;Name=NP_417129.1;gbkey=CDS;gene=yfjW;product=CP4-57 prophage%3B putative inner membrane protein;protein_id=NP_417129.1;transl_table=11 NC_000913.3 RefSeq gene 2775545 2775816 . + . ID=gene2707;Dbxref=EcoGene:EG13309,GeneID:5625570;Name=ypjI;gbkey=Gene;gene=ypjI;gene_biotype=pseudogene;gene_synonym=ECK4438;locus_tag=b4644;pseudo=true NC_000913.3 RefSeq CDS 2775545 2775724 . + 0 ID=cds2617;Parent=gene2707;Dbxref=UniProtKB/Swiss-Prot:P58095,EcoGene:EG13309,GeneID:5625570;Note=pseudogene%2C CP4-57 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=ypjI;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2775724 2775816 . + 0 ID=cds2617;Parent=gene2707;Dbxref=UniProtKB/Swiss-Prot:P58095,EcoGene:EG13309,GeneID:5625570;Note=pseudogene%2C CP4-57 putative prophage remnant%3BPhage or Prophage Related;gbkey=CDS;gene=ypjI;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2775919 2776377 . + . ID=gene2708;Dbxref=EcoGene:EG13210,GeneID:947126;Name=yfjX;gbkey=Gene;gene=yfjX;gene_biotype=protein_coding;gene_synonym=ECK2639,JW2624;locus_tag=b2643 NC_000913.3 RefSeq CDS 2775919 2776377 . + 0 ID=cds2618;Parent=gene2708;Dbxref=ASAP:ABE-0008704,UniProtKB/Swiss-Prot:P52139,Genbank:NP_417130.1,EcoGene:EG13210,GeneID:947126;Name=NP_417130.1;gbkey=CDS;gene=yfjX;product=CP4-57 prophage%3B putative antirestriction protein;protein_id=NP_417130.1;transl_table=11 NC_000913.3 RefSeq gene 2776386 2776868 . + . ID=gene2709;Dbxref=EcoGene:EG13211,GeneID:947125;Name=yfjY;gbkey=Gene;gene=yfjY;gene_biotype=protein_coding;gene_synonym=ECK2640,JW2625;locus_tag=b2644 NC_000913.3 RefSeq CDS 2776386 2776868 . + 0 ID=cds2619;Parent=gene2709;Dbxref=ASAP:ABE-0008706,UniProtKB/Swiss-Prot:P52140,Genbank:NP_417131.1,EcoGene:EG13211,GeneID:947125;Name=NP_417131.1;Note=putative DNA repair protein;gbkey=CDS;gene=yfjY;product=CP4-57 prophage%3B putative DNA repair protein;protein_id=NP_417131.1;transl_table=11 NC_000913.3 RefSeq gene 2776877 2777077 . + . ID=gene2710;Dbxref=EcoGene:EG14330,GeneID:1450287;Name=ypjJ;gbkey=Gene;gene=ypjJ;gene_biotype=protein_coding;gene_synonym=ECK2641,JW5421;locus_tag=b4548 NC_000913.3 RefSeq CDS 2776877 2777077 . + 0 ID=cds2620;Parent=gene2710;Dbxref=ASAP:ABE-0285069,UniProtKB/Swiss-Prot:P58033,Genbank:YP_588466.1,EcoGene:EG14330,GeneID:1450287;Name=YP_588466.1;gbkey=CDS;gene=ypjJ;product=uncharacterized protein;protein_id=YP_588466.1;transl_table=11 NC_000913.3 RefSeq gene 2777115 2777432 . + . ID=gene2711;Dbxref=EcoGene:EG13212,GeneID:947123;Name=yfjZ;gbkey=Gene;gene=yfjZ;gene_biotype=protein_coding;gene_synonym=ECK2642,JW2626;locus_tag=b2645 NC_000913.3 RefSeq CDS 2777115 2777432 . + 0 ID=cds2621;Parent=gene2711;Dbxref=ASAP:ABE-0008709,UniProtKB/Swiss-Prot:P52141,Genbank:NP_417132.1,EcoGene:EG13212,GeneID:947123;Name=NP_417132.1;gbkey=CDS;gene=yfjZ;product=CP4-57 prophage%3B antitoxin of the YpjF-YfjZ toxin-antitoxin system;protein_id=NP_417132.1;transl_table=11 NC_000913.3 RefSeq gene 2777453 2777782 . + . ID=gene2712;Dbxref=EcoGene:EG14284,GeneID:947131;Name=ypjF;gbkey=Gene;gene=ypjF;gene_biotype=protein_coding;gene_synonym=ECK2643,JW2627;locus_tag=b2646 NC_000913.3 RefSeq CDS 2777453 2777782 . + 0 ID=cds2622;Parent=gene2712;Dbxref=ASAP:ABE-0008711,UniProtKB/Swiss-Prot:Q46953,Genbank:NP_417133.1,EcoGene:EG14284,GeneID:947131;Name=NP_417133.1;gbkey=CDS;gene=ypjF;product=CP4-57 prophage%3B toxin of the YpjF-YfjZ toxin-antitoxin system;protein_id=NP_417133.1;transl_table=11 NC_000913.3 RefSeq gene 2777972 2777985 . + . ID=gene2713;Dbxref=EcoGene:EG31174,GeneID:5625571;Name=psaA;gbkey=Gene;gene=psaA;gene_biotype=tmRNA_pseudogene;gene_synonym=ECK4465;locus_tag=b4645;pseudo=true NC_000913.3 RefSeq tmRNA 2777972 2777985 . + . ID=rna89;Parent=gene2713;Dbxref=EcoGene:EG31174,GeneID:5625571;Note=CP4-57 attachment site duplication%2C ssrA pseudogene;gbkey=tmRNA;gene=psaA;pseudo=true NC_000913.3 RefSeq exon 2777972 2777985 . + . ID=id325;Parent=rna89;Dbxref=EcoGene:EG31174,GeneID:5625571;Note=CP4-57 attachment site duplication%2C ssrA pseudogene;gbkey=tmRNA;gene=psaA;pseudo=true NC_000913.3 RefSeq gene 2778146 2782726 . - . ID=gene2714;Dbxref=EcoGene:EG13213,GeneID:948630;Name=ypjA;gbkey=Gene;gene=ypjA;gene_biotype=protein_coding;gene_synonym=ECK2644,JW5422;locus_tag=b2647 NC_000913.3 RefSeq CDS 2778146 2782726 . - 0 ID=cds2623;Parent=gene2714;Dbxref=ASAP:ABE-0008713,UniProtKB/Swiss-Prot:P52143,Genbank:NP_417134.2,EcoGene:EG13213,GeneID:948630;Name=NP_417134.2;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=ypjA;product=adhesin-like autotransporter;protein_id=NP_417134.2;transl_table=11 NC_000913.3 RefSeq gene 2783065 2783304 . - . ID=gene2715;Dbxref=EcoGene:EG14310,GeneID:947250;Name=pinH;gbkey=Gene;gene=pinH;gene_biotype=pseudogene;gene_synonym=ECK2645,JW5423,ypjG;locus_tag=b2648;pseudo=true NC_000913.3 RefSeq CDS 2783065 2783304 . - 0 ID=cds2624;Parent=gene2715;Dbxref=ASAP:ABE-0008721,UniProtKB/Swiss-Prot:P76611,EcoGene:EG14310,GeneID:947250;Note=pseudogene%2C invertase resolvase family;gbkey=CDS;gene=pinH;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2783638 2785011 . - . ID=gene2716;Dbxref=EcoGene:EG13519,GeneID:947640;Name=ypjC;gbkey=Gene;gene=ypjC;gene_biotype=pseudogene;gene_synonym=ECK2646,JW2629,ypjB;locus_tag=b2650;pseudo=true NC_000913.3 RefSeq CDS 2783638 2785011 . - 0 ID=cds2625;Parent=gene2716;Dbxref=ASAP:ABE-0008724,ASAP:ABE-0008727,UniProtKB/Swiss-Prot:P76613,EcoGene:EG13519,GeneID:947640;Note=pseudogene;gbkey=CDS;gene=ypjC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2785762 2785837 . - . ID=gene2717;Dbxref=EcoGene:EG31121,GeneID:947163;Name=ileY;gbkey=Gene;gene=ileY;gene_biotype=tRNA;gene_synonym=ECK2648,JWR0056;locus_tag=b2652 NC_000913.3 RefSeq tRNA 2785762 2785837 . - . ID=rna90;Parent=gene2717;Dbxref=ASAP:ABE-0008733,EcoGene:EG31121,GeneID:947163;Note=anticodon: GAU;gbkey=tRNA;gene=ileY;product=tRNA-Ile NC_000913.3 RefSeq exon 2785762 2785837 . - . ID=id326;Parent=rna90;Dbxref=ASAP:ABE-0008733,EcoGene:EG31121,GeneID:947163;Note=anticodon: GAU;gbkey=tRNA;gene=ileY;product=tRNA-Ile NC_000913.3 RefSeq gene 2786397 2788649 . + . ID=gene2718;Dbxref=EcoGene:EG13520,GeneID:2847762;Name=ygaQ;gbkey=Gene;gene=ygaQ;gene_biotype=pseudogene;gene_synonym=ECK2649,JW5425,ygaR,yqaC,yqaD;locus_tag=b4462;pseudo=true NC_000913.3 RefSeq CDS 2786397 2788649 . + 0 ID=cds2626;Parent=gene2718;Dbxref=ASAP:ABE-0008739,ASAP:ABE-0008747,ASAP:ABE-0008751,ASAP:ABE-0174112,UniProtKB/Swiss-Prot:P76616,EcoGene:EG13520,GeneID:2847762;Note=uncharacterized protein~putative enzyme;gbkey=CDS;gene=ygaQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2788985 2789962 . + . ID=gene2719;Dbxref=EcoGene:EG13523,GeneID:948076;Name=csiD;gbkey=Gene;gene=csiD;gene_biotype=protein_coding;gene_synonym=csi-12,ECK2653,JW5427,ygaT;locus_tag=b2659 NC_000913.3 RefSeq CDS 2788985 2789962 . + 0 ID=cds2627;Parent=gene2719;Dbxref=ASAP:ABE-0008754,UniProtKB/Swiss-Prot:P76621,Genbank:NP_417145.4,EcoGene:EG13523,GeneID:948076;Name=NP_417145.4;gbkey=CDS;gene=csiD;product=carbon starvation protein;protein_id=NP_417145.4;transl_table=11 NC_000913.3 RefSeq gene 2789982 2791250 . + . ID=gene2720;Dbxref=EcoGene:EG12387,GeneID:948069;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;gene_synonym=ECK2654,JW2635,ygaF;locus_tag=b2660 NC_000913.3 RefSeq CDS 2789982 2791250 . + 0 ID=cds2628;Parent=gene2720;Dbxref=ASAP:ABE-0008756,UniProtKB/Swiss-Prot:P37339,Genbank:NP_417146.2,EcoGene:EG12387,GeneID:948069;Name=NP_417146.2;gbkey=CDS;gene=lhgO;product=L-2-hydroxyglutarate oxidase;protein_id=NP_417146.2;transl_table=11 NC_000913.3 RefSeq gene 2791273 2792721 . + . ID=gene2721;Dbxref=EcoGene:EG11329,GeneID:948060;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;gene_synonym=ECK2655,JW2636;locus_tag=b2661 NC_000913.3 RefSeq CDS 2791273 2792721 . + 0 ID=cds2629;Parent=gene2721;Dbxref=ASAP:ABE-0008758,UniProtKB/Swiss-Prot:P25526,Genbank:NP_417147.1,EcoGene:EG11329,GeneID:948060;Name=NP_417147.1;Note=succinate-semialdehyde dehydrogenase%2C NADP-dependent activity;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase I%2C NADP-dependent;protein_id=NP_417147.1;transl_table=11 NC_000913.3 RefSeq gene 2792735 2794015 . + . ID=gene2722;Dbxref=EcoGene:EG10361,GeneID:948067;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;gene_synonym=ECK2656,JW2637;locus_tag=b2662 NC_000913.3 RefSeq CDS 2792735 2794015 . + 0 ID=cds2630;Parent=gene2722;Dbxref=ASAP:ABE-0008760,UniProtKB/Swiss-Prot:P22256,Genbank:NP_417148.1,EcoGene:EG10361,GeneID:948067;Name=NP_417148.1;Note=4-aminobutyrate aminotransferase activity;gbkey=CDS;gene=gabT;product=4-aminobutyrate aminotransferase%2C PLP-dependent;protein_id=NP_417148.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2794028 2794163 . + . ID=id327;Note=REP191 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2794253 2795653 . + . ID=gene2723;Dbxref=EcoGene:EG11330,GeneID:948049;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;gene_synonym=ECK2657,JW2638;locus_tag=b2663 NC_000913.3 RefSeq CDS 2794253 2795653 . + 0 ID=cds2631;Parent=gene2723;Dbxref=ASAP:ABE-0008763,UniProtKB/Swiss-Prot:P25527,Genbank:NP_417149.1,EcoGene:EG11330,GeneID:948049;Name=NP_417149.1;Note=transport permease protein of gamma-aminobutyrate;gbkey=CDS;gene=gabP;product=gamma-aminobutyrate transporter;protein_id=NP_417149.1;transl_table=11 NC_000913.3 RefSeq gene 2795674 2796336 . + . ID=gene2724;Dbxref=EcoGene:EG12386,GeneID:948055;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;gene_synonym=ECK2658,gabC,JW2639,ygaE;locus_tag=b2664 NC_000913.3 RefSeq CDS 2795674 2796336 . + 0 ID=cds2632;Parent=gene2724;Dbxref=ASAP:ABE-0008765,UniProtKB/Swiss-Prot:P37338,Genbank:NP_417150.4,EcoGene:EG12386,GeneID:948055;Name=NP_417150.4;Note=putative transcriptional regulator;gbkey=CDS;gene=csiR;product=transcriptional repressor of csiD;protein_id=NP_417150.4;transl_table=11 NC_000913.3 RefSeq gene 2796337 2796786 . - . ID=gene2725;Dbxref=EcoGene:EG12675,GeneID:947144;Name=ygaU;gbkey=Gene;gene=ygaU;gene_biotype=protein_coding;gene_synonym=ECK2659,JW2640,yzzM;locus_tag=b2665 NC_000913.3 RefSeq CDS 2796337 2796786 . - 0 ID=cds2633;Parent=gene2725;Dbxref=ASAP:ABE-0008767,UniProtKB/Swiss-Prot:P0ADE6,Genbank:NP_417151.1,EcoGene:EG12675,GeneID:947144;Name=NP_417151.1;gbkey=CDS;gene=ygaU;product=uncharacterized protein;protein_id=NP_417151.1;transl_table=11 NC_000913.3 RefSeq gene 2796870 2797028 . - . ID=gene2726;Dbxref=EcoGene:EG14313,GeneID:947138;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;gene_synonym=ECK2660,JW2641;locus_tag=b2666 NC_000913.3 RefSeq CDS 2796870 2797028 . - 0 ID=cds2634;Parent=gene2726;Dbxref=ASAP:ABE-0008770,UniProtKB/Swiss-Prot:P0AE42,Genbank:NP_417152.1,EcoGene:EG14313,GeneID:947138;Name=NP_417152.1;gbkey=CDS;gene=yqaE;product=cyaR sRNA-regulated protein;protein_id=NP_417152.1;transl_table=11 NC_000913.3 RefSeq gene 2797211 2797510 . + . ID=gene2727;Dbxref=EcoGene:EG13524,GeneID:947136;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;gene_synonym=ECK2661,JW2642;locus_tag=b2667 NC_000913.3 RefSeq CDS 2797211 2797510 . + 0 ID=cds2635;Parent=gene2727;Dbxref=ASAP:ABE-0008784,UniProtKB/Swiss-Prot:P77295,Genbank:NP_417153.1,EcoGene:EG13524,GeneID:947136;Name=NP_417153.1;gbkey=CDS;gene=ygaV;product=tributyltin-inducible repressor of ygaVP;protein_id=NP_417153.1;transl_table=11 NC_000913.3 RefSeq gene 2797520 2798044 . + . ID=gene2728;Dbxref=EcoGene:EG13288,GeneID:947135;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;gene_synonym=ECK2662,JW2643;locus_tag=b2668 NC_000913.3 RefSeq CDS 2797520 2798044 . + 0 ID=cds2636;Parent=gene2728;Dbxref=ASAP:ABE-0008786,UniProtKB/Swiss-Prot:P55734,Genbank:NP_417154.1,EcoGene:EG13288,GeneID:947135;Name=NP_417154.1;gbkey=CDS;gene=ygaP;product=DUF2892 family inner membrane rhodanese;protein_id=NP_417154.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2798053 2798082 . + . ID=id328;Note=REP192 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2798091 2798495 . - . ID=gene2729;Dbxref=EcoGene:EG11554,GeneID:947130;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;gene_synonym=ECK2663,hnsB,hsm-3,JW2644,rsv;locus_tag=b2669 NC_000913.3 RefSeq CDS 2798091 2798495 . - 0 ID=cds2637;Parent=gene2729;Dbxref=ASAP:ABE-0008788,UniProtKB/Swiss-Prot:P0ACG1,Genbank:NP_417155.1,EcoGene:EG11554,GeneID:947130;Name=NP_417155.1;Note=DNA-binding protein%3B H-NS-like protein%3B chaperone activity%3B RNA splicing?;gbkey=CDS;gene=stpA;product=DNA binding protein%2C nucleoid-associated;protein_id=NP_417155.1;transl_table=11 NC_000913.3 RefSeq gene 2799164 2799613 . + . ID=gene2730;Dbxref=EcoGene:EG13525,GeneID:947147;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;gene_synonym=ECK2664,JW2645,ygaW;locus_tag=b2670 NC_000913.3 RefSeq CDS 2799164 2799613 . + 0 ID=cds2638;Parent=gene2730;Dbxref=ASAP:ABE-0008793,UniProtKB/Swiss-Prot:P64550,Genbank:NP_417156.1,EcoGene:EG13525,GeneID:947147;Name=NP_417156.1;gbkey=CDS;gene=alaE;product=alanine exporter%2C alanine-inducible%2C stress-responsive;protein_id=NP_417156.1;transl_table=11 NC_000913.3 RefSeq gene 2799650 2799994 . - . ID=gene2731;Dbxref=EcoGene:EG12201,GeneID:947156;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;gene_synonym=ECK2665,JW2646;locus_tag=b2671 NC_000913.3 RefSeq CDS 2799650 2799994 . - 0 ID=cds2639;Parent=gene2731;Dbxref=ASAP:ABE-0008795,UniProtKB/Swiss-Prot:P0AD53,Genbank:NP_417157.1,EcoGene:EG12201,GeneID:947156;Name=NP_417157.1;gbkey=CDS;gene=ygaC;product=uncharacterized protein;protein_id=NP_417157.1;transl_table=11 NC_000913.3 RefSeq gene 2800146 2800475 . + . ID=gene2732;Dbxref=EcoGene:EG13285,GeneID:947157;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;gene_synonym=ECK2666,JW2647;locus_tag=b2672 NC_000913.3 RefSeq CDS 2800146 2800475 . + 0 ID=cds2640;Parent=gene2732;Dbxref=ASAP:ABE-0008799,UniProtKB/Swiss-Prot:P0ADQ7,Genbank:NP_417158.4,EcoGene:EG13285,GeneID:947157;Name=NP_417158.4;gbkey=CDS;gene=ygaM;product=putative membrane-anchored DUF883 family ribosome-binding protein;protein_id=NP_417158.4;transl_table=11 NC_000913.3 RefSeq gene 2800723 2800968 . + . ID=gene2733;Dbxref=EcoGene:EG13286,GeneID:947161;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;gene_synonym=ECK2667,JW2648,ygaN;locus_tag=b2673 NC_000913.3 RefSeq CDS 2800723 2800968 . + 0 ID=cds2641;Parent=gene2733;Dbxref=ASAP:ABE-0008802,UniProtKB/Swiss-Prot:P0AC65,Genbank:NP_417159.1,EcoGene:EG13286,GeneID:947161;Name=NP_417159.1;Note=glutaredoxin-like protein%3B hydrogen donor;gbkey=CDS;gene=nrdH;product=hydrogen donor for NrdEF electron transport system%3B glutaredoxin-like protein;protein_id=NP_417159.1;transl_table=11 NC_000913.3 RefSeq gene 2800965 2801375 . + . ID=gene2734;Dbxref=EcoGene:EG13287,GeneID:947158;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;gene_synonym=ECK2668,JW2649,ygaO;locus_tag=b2674 NC_000913.3 RefSeq CDS 2800965 2801375 . + 0 ID=cds2642;Parent=gene2734;Dbxref=ASAP:ABE-0008804,UniProtKB/Swiss-Prot:P0A772,Genbank:NP_417160.1,EcoGene:EG13287,GeneID:947158;Name=NP_417160.1;gbkey=CDS;gene=nrdI;product=NrdEF cluster assembly flavodoxin;protein_id=NP_417160.1;transl_table=11 NC_000913.3 RefSeq gene 2801348 2803492 . + . ID=gene2735;Dbxref=EcoGene:EG20257,GeneID:947155;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;gene_synonym=ECK2669,JW2650;locus_tag=b2675 NC_000913.3 RefSeq CDS 2801348 2803492 . + 0 ID=cds2643;Parent=gene2735;Dbxref=ASAP:ABE-0008806,UniProtKB/Swiss-Prot:P39452,Genbank:NP_417161.1,EcoGene:EG20257,GeneID:947155;Name=NP_417161.1;gbkey=CDS;gene=nrdE;product=ribonucleoside-diphosphate reductase 2%2C alpha subunit;protein_id=NP_417161.1;transl_table=11 NC_000913.3 RefSeq gene 2803502 2804461 . + . ID=gene2736;Dbxref=EcoGene:EG12381,GeneID:947149;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;gene_synonym=ECK2670,JW2651,ygaD;locus_tag=b2676 NC_000913.3 RefSeq CDS 2803502 2804461 . + 0 ID=cds2644;Parent=gene2736;Dbxref=ASAP:ABE-0008808,UniProtKB/Swiss-Prot:P37146,Genbank:NP_417162.1,EcoGene:EG12381,GeneID:947149;Name=NP_417162.1;Note=ribonucleoside-diphosphate reductase 2%2C beta chain%2C frag;gbkey=CDS;gene=nrdF;product=ribonucleoside-diphosphate reductase 2%2C beta subunit%2C ferritin-like protein;protein_id=NP_417162.1;transl_table=11 NC_000913.3 RefSeq gene 2804815 2806017 . + . ID=gene2737;Dbxref=EcoGene:EG10771,GeneID:947148;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;gene_synonym=ECK2671,JW2652,osrA,proU;locus_tag=b2677 NC_000913.3 RefSeq CDS 2804815 2806017 . + 0 ID=cds2645;Parent=gene2737;Dbxref=ASAP:ABE-0008814,UniProtKB/Swiss-Prot:P14175,Genbank:NP_417163.1,EcoGene:EG10771,GeneID:947148;Name=NP_417163.1;Note=ATP-binding component of transport system for glycine%2C betaine and proline;gbkey=CDS;gene=proV;product=glycine betaine/proline ABC transporter periplasmic binding protein;protein_id=NP_417163.1;transl_table=11 NC_000913.3 RefSeq gene 2806010 2807074 . + . ID=gene2738;Dbxref=EcoGene:EG10772,GeneID:947145;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;gene_synonym=ECK2672,JW2653,osrA,proU;locus_tag=b2678 NC_000913.3 RefSeq CDS 2806010 2807074 . + 0 ID=cds2646;Parent=gene2738;Dbxref=ASAP:ABE-0008816,UniProtKB/Swiss-Prot:P14176,Genbank:NP_417164.1,EcoGene:EG10772,GeneID:947145;Name=NP_417164.1;Note=high-affinity transport system for glycine betaine and proline%3B membrane component of ABC superfamily;gbkey=CDS;gene=proW;product=glycine betaine/proline ABC transporter permease;protein_id=NP_417164.1;transl_table=11 NC_000913.3 RefSeq gene 2807132 2808124 . + . ID=gene2739;Dbxref=EcoGene:EG10773,GeneID:947165;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;gene_synonym=ECK2673,JW2654,osrA,proU;locus_tag=b2679 NC_000913.3 RefSeq CDS 2807132 2808124 . + 0 ID=cds2647;Parent=gene2739;Dbxref=ASAP:ABE-0008818,UniProtKB/Swiss-Prot:P0AFM2,Genbank:NP_417165.1,EcoGene:EG10773,GeneID:947165;Name=NP_417165.1;Note=high-affinity transport system for glycine betaine and proline%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=proX;product=glycine betaine/proline ABC transporter periplasmic binding protein%3B cold shock protein;protein_id=NP_417165.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2808131 2808214 . + . ID=id329;Note=REP193 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2808316 2809493 . + . ID=gene2740;Dbxref=EcoGene:EG13527,GeneID:2847696;Name=ygaY;gbkey=Gene;gene=ygaY;gene_biotype=pseudogene;gene_synonym=ECK2674,JW2655,ygaX;locus_tag=b2681;pseudo=true NC_000913.3 RefSeq CDS 2808316 2808576 . + 0 ID=cds2648;Parent=gene2740;Dbxref=ASAP:ABE-0008822,ASAP:ABE-0008824,UniProtKB/Swiss-Prot:P76628,EcoGene:EG13527,GeneID:2847696;Note=pseudogene%2C major facilitator transporter superfamily%3Bputative transport%3B Not classified~putative transport protein;gbkey=CDS;gene=ygaY;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2808570 2809493 . + 0 ID=cds2648;Parent=gene2740;Dbxref=ASAP:ABE-0008822,ASAP:ABE-0008824,UniProtKB/Swiss-Prot:P76628,EcoGene:EG13527,GeneID:2847696;Note=pseudogene%2C major facilitator transporter superfamily%3Bputative transport%3B Not classified~putative transport protein;gbkey=CDS;gene=ygaY;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2809617 2810354 . + . ID=gene2741;Dbxref=EcoGene:EG13528,GeneID:945093;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;gene_synonym=ECK2676,JW2657;locus_tag=b2682 NC_000913.3 RefSeq CDS 2809617 2810354 . + 0 ID=cds2649;Parent=gene2741;Dbxref=ASAP:ABE-0008829,UniProtKB/Swiss-Prot:P76630,Genbank:NP_417167.1,EcoGene:EG13528,GeneID:945093;Name=NP_417167.1;gbkey=CDS;gene=ygaZ;product=putative L-valine exporter%2C norvaline resistance protein;protein_id=NP_417167.1;transl_table=11 NC_000913.3 RefSeq gene 2810344 2810679 . + . ID=gene2742;Dbxref=EcoGene:EG12940,GeneID:945111;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;gene_synonym=ECK2677,JW2658;locus_tag=b2683 NC_000913.3 RefSeq CDS 2810344 2810679 . + 0 ID=cds2650;Parent=gene2742;Dbxref=ASAP:ABE-0008831,UniProtKB/Swiss-Prot:P43667,Genbank:NP_417168.1,EcoGene:EG12940,GeneID:945111;Name=NP_417168.1;gbkey=CDS;gene=ygaH;product=putative L-valine exporter%2C norvaline resistance protein;protein_id=NP_417168.1;transl_table=11 NC_000913.3 RefSeq gene 2810770 2811300 . + . ID=gene2743;Dbxref=EcoGene:EG10603,GeneID:945282;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;gene_synonym=ECK2678,emrR,JW2659;locus_tag=b2684 NC_000913.3 RefSeq CDS 2810770 2811300 . + 0 ID=cds2651;Parent=gene2743;Dbxref=ASAP:ABE-0008834,UniProtKB/Swiss-Prot:P0ACR9,Genbank:NP_417169.1,EcoGene:EG10603,GeneID:945282;Name=NP_417169.1;Note=regulator of plasmid mcrB operon (microcin B17 synthesis);gbkey=CDS;gene=mprA;product=transcriptional repressor of microcin B17 synthesis and multidrug efflux;protein_id=NP_417169.1;transl_table=11 NC_000913.3 RefSeq gene 2811427 2812599 . + . ID=gene2744;Dbxref=EcoGene:EG11354,GeneID:947166;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;gene_synonym=ECK2679,JW2660;locus_tag=b2685 NC_000913.3 RefSeq CDS 2811427 2812599 . + 0 ID=cds2652;Parent=gene2744;Dbxref=ASAP:ABE-0008838,UniProtKB/Swiss-Prot:P27303,Genbank:NP_417170.1,EcoGene:EG11354,GeneID:947166;Name=NP_417170.1;Note=multidrug resistance secretion protein;gbkey=CDS;gene=emrA;product=multidrug efflux system;protein_id=NP_417170.1;transl_table=11 NC_000913.3 RefSeq gene 2812616 2814154 . + . ID=gene2745;Dbxref=EcoGene:EG11439,GeneID:947167;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;gene_synonym=ECK2680,JW2661;locus_tag=b2686 NC_000913.3 RefSeq CDS 2812616 2814154 . + 0 ID=cds2653;Parent=gene2745;Dbxref=ASAP:ABE-0008840,UniProtKB/Swiss-Prot:P0AEJ0,Genbank:NP_417171.1,EcoGene:EG11439,GeneID:947167;Name=NP_417171.1;Note=multidrug resistance%3B probably membrane translocase;gbkey=CDS;gene=emrB;product=multidrug efflux system protein;protein_id=NP_417171.1;transl_table=11 NC_000913.3 RefSeq gene 2814218 2814733 . - . ID=gene2746;Dbxref=EcoGene:EG12712,GeneID:947168;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;gene_synonym=ECK2681,JW2662,ygaG;locus_tag=b2687 NC_000913.3 RefSeq CDS 2814218 2814733 . - 0 ID=cds2654;Parent=gene2746;Dbxref=ASAP:ABE-0008842,UniProtKB/Swiss-Prot:P45578,Genbank:NP_417172.1,EcoGene:EG12712,GeneID:947168;Name=NP_417172.1;gbkey=CDS;gene=luxS;product=S-ribosylhomocysteine lyase;protein_id=NP_417172.1;transl_table=11 NC_000913.3 RefSeq gene 2814802 2814879 . + . ID=gene2747;Dbxref=EcoGene:EG31156,GeneID:2847697;Name=micA;gbkey=Gene;gene=micA;gene_biotype=antisense_RNA;gene_synonym=ECK2682,JWR0246,psrA10,sraD;locus_tag=b4442 NC_000913.3 RefSeq ncRNA 2814802 2814879 . + . ID=rna91;Parent=gene2747;Dbxref=ASAP:ABE-0047262,EcoGene:EG31156,GeneID:2847697;Note=identified in a large scale screen;gbkey=ncRNA;gene=micA;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompA%2C lamB%2C ompX%2C and phoP%3B Hfq-dependent NC_000913.3 RefSeq exon 2814802 2814879 . + . ID=id330;Parent=rna91;Dbxref=ASAP:ABE-0047262,EcoGene:EG31156,GeneID:2847697;Note=identified in a large scale screen;gbkey=ncRNA;gene=micA;ncrna_class=antisense_RNA;product=sRNA antisense regulator of ompA%2C lamB%2C ompX%2C and phoP%3B Hfq-dependent NC_000913.3 RefSeq gene 2814883 2816439 . - . ID=gene2748;Dbxref=EcoGene:EG10418,GeneID:944881;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;gene_synonym=ECK2683,gshI,JW2663;locus_tag=b2688 NC_000913.3 RefSeq CDS 2814883 2816439 . - 0 ID=cds2655;Parent=gene2748;Dbxref=ASAP:ABE-0008845,UniProtKB/Swiss-Prot:P0A6W9,Genbank:NP_417173.1,EcoGene:EG10418,GeneID:944881;Name=NP_417173.1;gbkey=CDS;gene=gshA;product=glutamate-cysteine ligase;protein_id=NP_417173.1;transl_table=11 NC_000913.3 RefSeq gene 2816512 2816940 . - . ID=gene2749;Dbxref=EcoGene:EG13529,GeneID:945419;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;gene_synonym=ECK2684,JW2664;locus_tag=b2689 NC_000913.3 RefSeq CDS 2816512 2816940 . - 0 ID=cds2656;Parent=gene2749;Dbxref=ASAP:ABE-0008847,UniProtKB/Swiss-Prot:P0ADR0,Genbank:NP_417174.1,EcoGene:EG13529,GeneID:945419;Name=NP_417174.1;gbkey=CDS;gene=yqaA;product=COG1238 family inner membrane protein;protein_id=NP_417174.1;transl_table=11 NC_000913.3 RefSeq gene 2816937 2817503 . - . ID=gene2750;Dbxref=EcoGene:EG13530,GeneID:945776;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;gene_synonym=ECK2685,JW2665;locus_tag=b2690 NC_000913.3 RefSeq CDS 2816937 2817503 . - 0 ID=cds2657;Parent=gene2750;Dbxref=ASAP:ABE-0008850,UniProtKB/Swiss-Prot:P77475,Genbank:NP_417175.1,EcoGene:EG13530,GeneID:945776;Name=NP_417175.1;Note=putative phosphatase;gbkey=CDS;gene=yqaB;product=fructose-1-P and 6-phosphogluconate phosphatase;protein_id=NP_417175.1;transl_table=11 NC_000913.3 RefSeq gene 2817784 2817860 . - . ID=gene2751;Dbxref=EcoGene:EG30013,GeneID:947150;Name=argQ;gbkey=Gene;gene=argQ;gene_biotype=tRNA;gene_synonym=argVdelta,ECK2686,JWR0057;locus_tag=b2691 NC_000913.3 RefSeq tRNA 2817784 2817860 . - . ID=rna92;Parent=gene2751;Dbxref=ASAP:ABE-0008856,EcoGene:EG30013,GeneID:947150;Note=anticodon: ACG;gbkey=tRNA;gene=argQ;product=tRNA-Arg NC_000913.3 RefSeq exon 2817784 2817860 . - . ID=id331;Parent=rna92;Dbxref=ASAP:ABE-0008856,EcoGene:EG30013,GeneID:947150;Note=anticodon: ACG;gbkey=tRNA;gene=argQ;product=tRNA-Arg NC_000913.3 RefSeq gene 2818059 2818135 . - . ID=gene2752;Dbxref=EcoGene:EG30019,GeneID:947171;Name=argZ;gbkey=Gene;gene=argZ;gene_biotype=tRNA;gene_synonym=argVgamma,ECK2687,JWR0058;locus_tag=b2692 NC_000913.3 RefSeq tRNA 2818059 2818135 . - . ID=rna93;Parent=gene2752;Dbxref=ASAP:ABE-0008858,EcoGene:EG30019,GeneID:947171;Note=anticodon: ACG;gbkey=tRNA;gene=argZ;product=tRNA-Arg NC_000913.3 RefSeq exon 2818059 2818135 . - . ID=id332;Parent=rna93;Dbxref=ASAP:ABE-0008858,EcoGene:EG30019,GeneID:947171;Note=anticodon: ACG;gbkey=tRNA;gene=argZ;product=tRNA-Arg NC_000913.3 RefSeq gene 2818198 2818274 . - . ID=gene2753;Dbxref=EcoGene:EG30018,GeneID:946596;Name=argY;gbkey=Gene;gene=argY;gene_biotype=tRNA;gene_synonym=argVbeta,ECK2688,JWR0059;locus_tag=b2693 NC_000913.3 RefSeq tRNA 2818198 2818274 . - . ID=rna94;Parent=gene2753;Dbxref=ASAP:ABE-0008860,EcoGene:EG30018,GeneID:946596;Note=anticodon: ACG;gbkey=tRNA;gene=argY;product=tRNA-Arg NC_000913.3 RefSeq exon 2818198 2818274 . - . ID=id333;Parent=rna94;Dbxref=ASAP:ABE-0008860,EcoGene:EG30018,GeneID:946596;Note=anticodon: ACG;gbkey=tRNA;gene=argY;product=tRNA-Arg NC_000913.3 RefSeq gene 2818473 2818549 . - . ID=gene2754;Dbxref=EcoGene:EG30015,GeneID:947209;Name=argV;gbkey=Gene;gene=argV;gene_biotype=tRNA;gene_synonym=argValpha,ECK2689,JWR0060;locus_tag=b2694 NC_000913.3 RefSeq tRNA 2818473 2818549 . - . ID=rna95;Parent=gene2754;Dbxref=ASAP:ABE-0008862,EcoGene:EG30015,GeneID:947209;Note=anticodon: ACG;gbkey=tRNA;gene=argV;product=tRNA-Arg NC_000913.3 RefSeq exon 2818473 2818549 . - . ID=id334;Parent=rna95;Dbxref=ASAP:ABE-0008862,EcoGene:EG30015,GeneID:947209;Note=anticodon: ACG;gbkey=tRNA;gene=argV;product=tRNA-Arg NC_000913.3 RefSeq gene 2818553 2818645 . - . ID=gene2755;Dbxref=EcoGene:EG30095,GeneID:947173;Name=serV;gbkey=Gene;gene=serV;gene_biotype=tRNA;gene_synonym=ECK2690,JWR0061,supD;locus_tag=b2695 NC_000913.3 RefSeq tRNA 2818553 2818645 . - . ID=rna96;Parent=gene2755;Dbxref=ASAP:ABE-0008864,EcoGene:EG30095,GeneID:947173;Note=anticodon: GCU;gbkey=tRNA;gene=serV;product=tRNA-Ser NC_000913.3 RefSeq exon 2818553 2818645 . - . ID=id335;Parent=rna96;Dbxref=ASAP:ABE-0008864,EcoGene:EG30095,GeneID:947173;Note=anticodon: GCU;gbkey=tRNA;gene=serV;product=tRNA-Ser NC_000913.3 RefSeq gene 2818961 2819146 . - . ID=gene2756;Dbxref=EcoGene:EG11447,GeneID:947176;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;gene_synonym=ECK2691,JW2666,zfiA;locus_tag=b2696 NC_000913.3 RefSeq CDS 2818961 2819146 . - 0 ID=cds2658;Parent=gene2756;Dbxref=ASAP:ABE-0008866,UniProtKB/Swiss-Prot:P69913,Genbank:NP_417176.1,EcoGene:EG11447,GeneID:947176;Name=NP_417176.1;Note=carbon storage regulator%3B controls glycogen synthesis%2C gluconeogenesis%2C cell size and surface properties;gbkey=CDS;gene=csrA;product=pleiotropic regulatory protein for carbon source metabolism;protein_id=NP_417176.1;transl_table=11 NC_000913.3 RefSeq gene 2819381 2822011 . - . ID=gene2757;Dbxref=EcoGene:EG10034,GeneID:947175;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;gene_synonym=act,ala-act,ECK2692,JW2667,lovB;locus_tag=b2697 NC_000913.3 RefSeq CDS 2819381 2822011 . - 0 ID=cds2659;Parent=gene2757;Dbxref=ASAP:ABE-0008869,UniProtKB/Swiss-Prot:P00957,Genbank:NP_417177.1,EcoGene:EG10034,GeneID:947175;Name=NP_417177.1;gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=NP_417177.1;transl_table=11 NC_000913.3 RefSeq gene 2822139 2822639 . - . ID=gene2758;Dbxref=EcoGene:EG12080,GeneID:947172;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;gene_synonym=ECK2693,JW2668,oraA;locus_tag=b2698 NC_000913.3 RefSeq CDS 2822139 2822639 . - 0 ID=cds2660;Parent=gene2758;Dbxref=ASAP:ABE-0008872,UniProtKB/Swiss-Prot:P33596,Genbank:NP_417178.1,EcoGene:EG12080,GeneID:947172;Name=NP_417178.1;Note=regulator%2C OraA protein;gbkey=CDS;gene=recX;product=regulatory protein for RecA;protein_id=NP_417178.1;transl_table=11 NC_000913.3 RefSeq gene 2822708 2823769 . - . ID=gene2759;Dbxref=EcoGene:EG10823,GeneID:947170;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;gene_synonym=ECK2694,JW2669,lexB,recH,rnmB,srf,tif,umuB,umuR,zab;locus_tag=b2699 NC_000913.3 RefSeq CDS 2822708 2823769 . - 0 ID=cds2661;Parent=gene2759;Dbxref=ASAP:ABE-0008876,UniProtKB/Swiss-Prot:P0A7G6,Genbank:NP_417179.1,EcoGene:EG10823,GeneID:947170;Name=NP_417179.1;Note=DNA strand exchange and renaturation%2C DNA-dependent ATPase%2C DNA- and ATP-dependent coprotease;gbkey=CDS;gene=recA;product=DNA recombination and repair protein%3B ssDNA-dependent ATPase%3B synaptase%3B ssDNA and dsDNA binding protein%3B ATP-dependent homologous DNA strand exchanger%3B recombinase A%3B LexA autocleavage cofactor;protein_id=NP_417179.1;transl_table=11 NC_000913.3 RefSeq gene 2823849 2824346 . - . ID=gene2760;Dbxref=EcoGene:EG12698,GeneID:947169;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;gene_synonym=ECK2695,JW2670,ygaD;locus_tag=b2700 NC_000913.3 RefSeq CDS 2823849 2824346 . - 0 ID=cds2662;Parent=gene2760;Dbxref=ASAP:ABE-0008882,UniProtKB/Swiss-Prot:P0A6G3,Genbank:NP_417180.1,EcoGene:EG12698,GeneID:947169;Name=NP_417180.1;gbkey=CDS;gene=pncC;product=nicotinamide-nucleotide amidohydrolase%3B NMN amidohydrolase;protein_id=NP_417180.1;transl_table=11 NC_000913.3 RefSeq gene 2824491 2825576 . - . ID=gene2761;Dbxref=EcoGene:EG12699,GeneID:947184;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;gene_synonym=ECK2696,JW2671;locus_tag=b2701 NC_000913.3 RefSeq CDS 2824491 2825576 . - 0 ID=cds2663;Parent=gene2761;Dbxref=ASAP:ABE-0008885,UniProtKB/Swiss-Prot:P41052,Genbank:NP_417181.1,EcoGene:EG12699,GeneID:947184;Name=NP_417181.1;gbkey=CDS;gene=mltB;product=membrane-bound lytic murein transglycosylase B;protein_id=NP_417181.1;transl_table=11 NC_000913.3 RefSeq gene 2825832 2826395 . + . ID=gene2762;Dbxref=EcoGene:EG10969,GeneID:947575;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=ECK2697,gutA,JW5429,sbl;locus_tag=b2702 NC_000913.3 RefSeq CDS 2825832 2826395 . + 0 ID=cds2664;Parent=gene2762;Dbxref=ASAP:ABE-0008890,UniProtKB/Swiss-Prot:P56579,Genbank:YP_026180.1,EcoGene:EG10969,GeneID:947575;Name=YP_026180.1;Note=PTS system%2C glucitol/sorbitol-specific IIC component%2C one of two;gbkey=CDS;gene=srlA;product=glucitol/sorbitol-specific enzyme IIC component of PTS;protein_id=YP_026180.1;transl_table=11 NC_000913.3 RefSeq gene 2826392 2827351 . + . ID=gene2763;Dbxref=EcoGene:EG14373,GeneID:948933;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;gene_synonym=ECK2698,gutA,gutE,JW5430,sbl,srlA;locus_tag=b2703 NC_000913.3 RefSeq CDS 2826392 2827351 . + 0 ID=cds2665;Parent=gene2763;Dbxref=ASAP:ABE-0008892,UniProtKB/Swiss-Prot:P56580,Genbank:YP_026181.1,EcoGene:EG14373,GeneID:948933;Name=YP_026181.1;Note=PTS system%2C glucitol/sorbitol-specific IIB component and second of two IIC components;gbkey=CDS;gene=srlE;product=glucitol/sorbitol-specific enzyme IIB component of PTS;protein_id=YP_026181.1;transl_table=11 NC_000913.3 RefSeq gene 2827362 2827733 . + . ID=gene2764;Dbxref=EcoGene:EG10970,GeneID:948971;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=ECK2699,gutB,JW2673;locus_tag=b2704 NC_000913.3 RefSeq CDS 2827362 2827733 . + 0 ID=cds2666;Parent=gene2764;Dbxref=ASAP:ABE-0008894,UniProtKB/Swiss-Prot:P05706,Genbank:NP_417184.1,EcoGene:EG10970,GeneID:948971;Name=NP_417184.1;Note=PTS system%2C glucitol/sorbitol-specific enzyme IIA component;gbkey=CDS;gene=srlB;product=glucitol/sorbitol-specific enzyme IIA component of PTS;protein_id=NP_417184.1;transl_table=11 NC_000913.3 RefSeq gene 2827737 2828516 . + . ID=gene2765;Dbxref=EcoGene:EG10971,GeneID:948937;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;gene_synonym=ECK2700,gutD,JW2674;locus_tag=b2705 NC_000913.3 RefSeq CDS 2827737 2828516 . + 0 ID=cds2667;Parent=gene2765;Dbxref=ASAP:ABE-0008896,UniProtKB/Swiss-Prot:P05707,Genbank:NP_417185.1,EcoGene:EG10971,GeneID:948937;Name=NP_417185.1;Note=glucitol (sorbitol)-6-phosphate dehydrogenase;gbkey=CDS;gene=srlD;product=sorbitol-6-phosphate dehydrogenase;protein_id=NP_417185.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2828561 2828589 . + . ID=id336;Note=REP194 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2828621 2828980 . + . ID=gene2766;Dbxref=EcoGene:EG10972,GeneID:948938;Name=srlM;gbkey=Gene;gene=srlM;gene_biotype=protein_coding;gene_synonym=ECK2701,gutM,JW2675;locus_tag=b2706 NC_000913.3 RefSeq CDS 2828621 2828980 . + 0 ID=cds2668;Parent=gene2766;Dbxref=ASAP:ABE-0008898,UniProtKB/Swiss-Prot:P15081,Genbank:NP_417186.1,EcoGene:EG10972,GeneID:948938;Name=NP_417186.1;Note=glucitol operon activator;gbkey=CDS;gene=srlM;product=sorbitol%3Dresponsive srl operon transcriptional activator;protein_id=NP_417186.1;transl_table=11 NC_000913.3 RefSeq gene 2829047 2829820 . + . ID=gene2767;Dbxref=EcoGene:EG10974,GeneID:948942;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=ECK2702,gutR,JW2676;locus_tag=b2707 NC_000913.3 RefSeq CDS 2829047 2829820 . + 0 ID=cds2669;Parent=gene2767;Dbxref=ASAP:ABE-0008900,UniProtKB/Swiss-Prot:P15082,Genbank:NP_417187.1,EcoGene:EG10974,GeneID:948942;Name=NP_417187.1;Note=regulator for gut (srl)%2C glucitol operon;gbkey=CDS;gene=srlR;product=sorbitol-inducible srl operon transcriptional repressor;protein_id=NP_417187.1;transl_table=11 NC_000913.3 RefSeq gene 2829813 2830778 . + . ID=gene2768;Dbxref=EcoGene:EG10973,GeneID:947587;Name=srlQ;gbkey=Gene;gene=srlQ;gene_biotype=protein_coding;gene_synonym=ECK2703,gutQ,JW5431;locus_tag=b2708 NC_000913.3 RefSeq CDS 2829813 2830778 . + 0 ID=cds2670;Parent=gene2768;Dbxref=ASAP:ABE-0008902,UniProtKB/Swiss-Prot:P17115,Genbank:NP_417188.4,EcoGene:EG10973,GeneID:947587;Name=NP_417188.4;gbkey=CDS;gene=srlQ;product=D-arabinose 5-phosphate isomerase;protein_id=NP_417188.4;transl_table=11 NC_000913.3 RefSeq gene 2830775 2832289 . - . ID=gene2769;Dbxref=EcoGene:EG12108,GeneID:947186;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;gene_synonym=ECK2704,JW5843,ygaA;locus_tag=b2709 NC_000913.3 RefSeq CDS 2830775 2832289 . - 0 ID=cds2671;Parent=gene2769;Dbxref=ASAP:ABE-0008904,UniProtKB/Swiss-Prot:P37013,Genbank:NP_417189.2,EcoGene:EG12108,GeneID:947186;Name=NP_417189.2;Note=putative 2-component transcriptional regulator;gbkey=CDS;gene=norR;product=anaerobic nitric oxide reductase DNA-binding transcriptional activator;protein_id=NP_417189.2;transl_table=11 NC_000913.3 RefSeq gene 2832476 2833915 . + . ID=gene2770;Dbxref=EcoGene:EG12963,GeneID:948979;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;gene_synonym=ECK2705,flrd,JW2680,ygaI,ygaJ,ygaK;locus_tag=b2710 NC_000913.3 RefSeq CDS 2832476 2833915 . + 0 ID=cds2672;Parent=gene2770;Dbxref=ASAP:ABE-0008910,UniProtKB/Swiss-Prot:Q46877,Genbank:NP_417190.1,EcoGene:EG12963,GeneID:948979;Name=NP_417190.1;Note=putative flavodoxin;gbkey=CDS;gene=norV;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=NP_417190.1;transl_table=11 NC_000913.3 RefSeq gene 2833912 2835045 . + . ID=gene2771;Dbxref=EcoGene:EG12450,GeneID:947088;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;gene_synonym=ECK2706,JW2681,ygaL,ygbD;locus_tag=b2711 NC_000913.3 RefSeq CDS 2833912 2835045 . + 0 ID=cds2673;Parent=gene2771;Dbxref=ASAP:ABE-0008912,UniProtKB/Swiss-Prot:P37596,Genbank:NP_417191.1,EcoGene:EG12450,GeneID:947088;Name=NP_417191.1;Note=putative oxidoreductase;gbkey=CDS;gene=norW;product=NADH:flavorubredoxin oxidoreductase;protein_id=NP_417191.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2835067 2835148 . + . ID=id337;Note=REP195 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2835173 2837425 . - . ID=gene2772;Dbxref=EcoGene:EG11551,GeneID:944963;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;gene_synonym=ECK2707,hydA,JW5433;locus_tag=b2712 NC_000913.3 RefSeq CDS 2835173 2837425 . - 0 ID=cds2674;Parent=gene2772;Dbxref=ASAP:ABE-0008915,UniProtKB/Swiss-Prot:P30131,Genbank:NP_417192.1,EcoGene:EG11551,GeneID:944963;Name=NP_417192.1;Note=transcriptional regulatory protein;gbkey=CDS;gene=hypF;product=carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein;protein_id=NP_417192.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2837465 2837491 . + . ID=id338;Note=REP196 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2837578 2838105 . - . ID=gene2773;Dbxref=EcoGene:EG11552,GeneID:947190;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;gene_synonym=ECK2708,JW2683;locus_tag=b2713 NC_000913.3 RefSeq CDS 2837578 2838105 . - 0 ID=cds2675;Parent=gene2773;Dbxref=ASAP:ABE-0008919,UniProtKB/Swiss-Prot:P0AAK4,Genbank:NP_417193.1,EcoGene:EG11552,GeneID:947190;Name=NP_417193.1;Note=involved in electron transport from formate to hydrogen%2C Fe-S centers;gbkey=CDS;gene=hydN;product=formate dehydrogenase-H%2C [4Fe-4S] ferredoxin subunit;protein_id=NP_417193.1;transl_table=11 NC_000913.3 RefSeq gene 2838254 2839264 . - . ID=gene2774;Dbxref=EcoGene:EG10087,GeneID:947305;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;gene_synonym=ECK2709,JW5434,sac;locus_tag=b2714 NC_000913.3 RefSeq CDS 2838254 2839264 . - 0 ID=cds2676;Parent=gene2774;Dbxref=ASAP:ABE-0008922,UniProtKB/Swiss-Prot:P24242,Genbank:NP_417194.2,EcoGene:EG10087,GeneID:947305;Name=NP_417194.2;Note=ascBF operon repressor;gbkey=CDS;gene=ascG;product=asc operon transcriptional repressor%3B prpBC operon repressor;protein_id=NP_417194.2;transl_table=11 NC_000913.3 RefSeq gene 2839524 2840981 . + . ID=gene2775;Dbxref=EcoGene:EG10086,GeneID:947154;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;gene_synonym=ECK2710,JW5435,sac;locus_tag=b2715 NC_000913.3 RefSeq CDS 2839524 2840981 . + 0 ID=cds2677;Parent=gene2775;Dbxref=ASAP:ABE-0008926,UniProtKB/Swiss-Prot:P24241,Genbank:YP_026182.1,EcoGene:EG10086,GeneID:947154;Name=YP_026182.1;Note=PTS system enzyme II ABC (asc)%2C cryptic%2C transports specific beta-glucosides;gbkey=CDS;gene=ascF;product=cellobiose/arbutin/salicin-specific PTS enzymes%2C IIB and IC components;protein_id=YP_026182.1;transl_table=11 NC_000913.3 RefSeq gene 2840990 2842414 . + . ID=gene2776;Dbxref=EcoGene:EG10085,GeneID:947460;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;gene_synonym=ECK2711,JW2686,sac;locus_tag=b2716 NC_000913.3 RefSeq CDS 2840990 2842414 . + 0 ID=cds2678;Parent=gene2776;Dbxref=ASAP:ABE-0008928,UniProtKB/Swiss-Prot:P24240,Genbank:NP_417196.1,EcoGene:EG10085,GeneID:947460;Name=NP_417196.1;Note=6-phospho-beta-glucosidase%3B cryptic;gbkey=CDS;gene=ascB;product=cryptic 6-phospho-beta-glucosidase;protein_id=NP_417196.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2842423 2842501 . + . ID=id339;Note=REP197 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2842573 2843043 . - . ID=gene2777;Dbxref=EcoGene:EG13396,GeneID:947428;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;gene_synonym=ECK2712,JW2687;locus_tag=b2717 NC_000913.3 RefSeq CDS 2842573 2843043 . - 0 ID=cds2679;Parent=gene2777;Dbxref=ASAP:ABE-0008931,UniProtKB/Swiss-Prot:P0AEV9,Genbank:NP_417197.1,EcoGene:EG13396,GeneID:947428;Name=NP_417197.1;Note=protease involved in processing C-terminal end of the large subunit of hydrogenase 3;gbkey=CDS;gene=hycI;product=protease involved in processing C-terminal end of HycE;protein_id=NP_417197.1;transl_table=11 NC_000913.3 RefSeq gene 2843036 2843446 . - . ID=gene2778;Dbxref=EcoGene:EG10481,GeneID:947438;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;gene_synonym=ECK2713,hevH,JW2688;locus_tag=b2718 NC_000913.3 RefSeq CDS 2843036 2843446 . - 0 ID=cds2680;Parent=gene2778;Dbxref=ASAP:ABE-0008933,UniProtKB/Swiss-Prot:P0AEV7,Genbank:NP_417198.1,EcoGene:EG10481,GeneID:947438;Name=NP_417198.1;Note=processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex);gbkey=CDS;gene=hycH;product=hydrogenase 3 maturation protein;protein_id=NP_417198.1;transl_table=11 NC_000913.3 RefSeq gene 2843443 2844210 . - . ID=gene2779;Dbxref=EcoGene:EG10480,GeneID:947191;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;gene_synonym=ECK2714,hevG,JW2689;locus_tag=b2719 NC_000913.3 RefSeq CDS 2843443 2844210 . - 0 ID=cds2681;Parent=gene2779;Dbxref=ASAP:ABE-0008936,UniProtKB/Swiss-Prot:P16433,Genbank:NP_417199.1,EcoGene:EG10480,GeneID:947191;Name=NP_417199.1;Note=hydrogenase activity;gbkey=CDS;gene=hycG;product=hydrogenase 3 and formate hydrogenase complex%2C HycG subunit;protein_id=NP_417199.1;transl_table=11 NC_000913.3 RefSeq gene 2844210 2844752 . - . ID=gene2780;Dbxref=EcoGene:EG10479,GeneID:947048;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;gene_synonym=ECK2715,hevF,JW2690;locus_tag=b2720 NC_000913.3 RefSeq CDS 2844210 2844752 . - 0 ID=cds2682;Parent=gene2780;Dbxref=ASAP:ABE-0008942,UniProtKB/Swiss-Prot:P16432,Genbank:NP_417200.1,EcoGene:EG10479,GeneID:947048;Name=NP_417200.1;Note=probable iron-sulfur protein of hydrogenase 3 (part of FHL complex);gbkey=CDS;gene=hycF;product=formate hydrogenlyase complex iron-sulfur protein;protein_id=NP_417200.1;transl_table=11 NC_000913.3 RefSeq gene 2844762 2846471 . - . ID=gene2781;Dbxref=EcoGene:EG10478,GeneID:947396;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;gene_synonym=ECK2716,hevE,JW2691;locus_tag=b2721 NC_000913.3 RefSeq CDS 2844762 2846471 . - 0 ID=cds2683;Parent=gene2781;Dbxref=ASAP:ABE-0008944,UniProtKB/Swiss-Prot:P16431,Genbank:NP_417201.1,EcoGene:EG10478,GeneID:947396;Name=NP_417201.1;Note=large subunit of hydrogenase 3 (part of FHL complex);gbkey=CDS;gene=hycE;product=hydrogenase 3%2C large subunit;protein_id=NP_417201.1;transl_table=11 NC_000913.3 RefSeq gene 2846489 2847412 . - . ID=gene2782;Dbxref=EcoGene:EG10477,GeneID:948994;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;gene_synonym=ECK2717,hevD,JW2692;locus_tag=b2722 NC_000913.3 RefSeq CDS 2846489 2847412 . - 0 ID=cds2684;Parent=gene2782;Dbxref=ASAP:ABE-0008946,UniProtKB/Swiss-Prot:P16430,Genbank:NP_417202.1,EcoGene:EG10477,GeneID:948994;Name=NP_417202.1;Note=membrane-spanning protein of hydrogenase 3 (part of FHL complex);gbkey=CDS;gene=hycD;product=hydrogenase 3%2C membrane subunit;protein_id=NP_417202.1;transl_table=11 NC_000913.3 RefSeq gene 2847415 2849241 . - . ID=gene2783;Dbxref=EcoGene:EG10476,GeneID:945327;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;gene_synonym=ECK2718,hevC,JW2693;locus_tag=b2723 NC_000913.3 RefSeq CDS 2847415 2849241 . - 0 ID=cds2685;Parent=gene2783;Dbxref=ASAP:ABE-0008948,UniProtKB/Swiss-Prot:P16429,Genbank:NP_417203.1,EcoGene:EG10476,GeneID:945327;Name=NP_417203.1;Note=membrane-spanning protein of hydrogenase 3 (part of FHL complex);gbkey=CDS;gene=hycC;product=hydrogenase 3%2C membrane subunit;protein_id=NP_417203.1;transl_table=11 NC_000913.3 RefSeq gene 2849238 2849849 . - . ID=gene2784;Dbxref=EcoGene:EG10475,GeneID:948002;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;gene_synonym=ECK2719,hevB,JW2694;locus_tag=b2724 NC_000913.3 RefSeq CDS 2849238 2849849 . - 0 ID=cds2686;Parent=gene2784;Dbxref=ASAP:ABE-0008950,UniProtKB/Swiss-Prot:P0AAK1,Genbank:NP_417204.1,EcoGene:EG10475,GeneID:948002;Name=NP_417204.1;Note=probable small subunit of hydrogenase-3%2C iron-sulfur protein (part of formate hydrogenlyase (FHL) complex);gbkey=CDS;gene=hycB;product=hydrogenase 3%2C Fe-S subunit;protein_id=NP_417204.1;transl_table=11 NC_000913.3 RefSeq gene 2849974 2850435 . - . ID=gene2785;Dbxref=EcoGene:EG10474,GeneID:947193;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;gene_synonym=ECK2720,hevA,JW2695;locus_tag=b2725 NC_000913.3 RefSeq CDS 2849974 2850435 . - 0 ID=cds2687;Parent=gene2785;Dbxref=ASAP:ABE-0008952,UniProtKB/Swiss-Prot:P0AEV4,Genbank:NP_417205.1,EcoGene:EG10474,GeneID:947193;Name=NP_417205.1;Note=transcriptional repression of hyc and hyp operons;gbkey=CDS;gene=hycA;product=regulator of the transcriptional regulator FhlA;protein_id=NP_417205.1;transl_table=11 NC_000913.3 RefSeq gene 2850647 2850997 . + . ID=gene2786;Dbxref=EcoGene:EG10483,GeneID:947195;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;gene_synonym=ECK2721,JW2696;locus_tag=b2726 NC_000913.3 RefSeq CDS 2850647 2850997 . + 0 ID=cds2688;Parent=gene2786;Dbxref=ASAP:ABE-0008958,UniProtKB/Swiss-Prot:P0A700,Genbank:NP_417206.1,EcoGene:EG10483,GeneID:947195;Name=NP_417206.1;Note=pleiotrophic effects on 3 hydrogenase isozymes;gbkey=CDS;gene=hypA;product=protein involved in nickel insertion into hydrogenases 3;protein_id=NP_417206.1;transl_table=11 NC_000913.3 RefSeq gene 2851001 2851873 . + . ID=gene2787;Dbxref=EcoGene:EG10484,GeneID:947194;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;gene_synonym=ECK2722,hydB,hydE,JW2697;locus_tag=b2727 NC_000913.3 RefSeq CDS 2851001 2851873 . + 0 ID=cds2689;Parent=gene2787;Dbxref=ASAP:ABE-0008960,UniProtKB/Swiss-Prot:P0AAN3,Genbank:NP_417207.1,EcoGene:EG10484,GeneID:947194;Name=NP_417207.1;Note=guanine-nucleotide binding protein%2C functions as nickel donor for large subunit of hydrogenase 3;gbkey=CDS;gene=hypB;product=GTP hydrolase involved in nickel liganding into hydrogenases;protein_id=NP_417207.1;transl_table=11 NC_000913.3 RefSeq gene 2851864 2852136 . + . ID=gene2788;Dbxref=EcoGene:EG10485,GeneID:947192;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;gene_synonym=ECK2723,JW2698;locus_tag=b2728 NC_000913.3 RefSeq CDS 2851864 2852136 . + 0 ID=cds2690;Parent=gene2788;Dbxref=ASAP:ABE-0008962,UniProtKB/Swiss-Prot:P0AAM3,Genbank:NP_417208.1,EcoGene:EG10485,GeneID:947192;Name=NP_417208.1;Note=pleiotrophic effects on 3 hydrogenase isozymes;gbkey=CDS;gene=hypC;product=hydrogenase maturation protein;protein_id=NP_417208.1;transl_table=11 NC_000913.3 RefSeq gene 2852136 2853257 . + . ID=gene2789;Dbxref=EcoGene:EG10486,GeneID:947189;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;gene_synonym=ECK2724,hydF,JW2699;locus_tag=b2729 NC_000913.3 RefSeq CDS 2852136 2853257 . + 0 ID=cds2691;Parent=gene2789;Dbxref=ASAP:ABE-0008965,UniProtKB/Swiss-Prot:P24192,Genbank:NP_417209.1,EcoGene:EG10486,GeneID:947189;Name=NP_417209.1;Note=pleiotrophic effects on 3 hydrogenase isozymes;gbkey=CDS;gene=hypD;product=hydrogenase maturation protein;protein_id=NP_417209.1;transl_table=11 NC_000913.3 RefSeq gene 2853254 2854264 . + . ID=gene2790;Dbxref=EcoGene:EG10487,GeneID:947182;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;gene_synonym=ECK2725,hydB,JW2700;locus_tag=b2730 NC_000913.3 RefSeq CDS 2853254 2854264 . + 0 ID=cds2692;Parent=gene2790;Dbxref=ASAP:ABE-0008967,UniProtKB/Swiss-Prot:P24193,Genbank:NP_417210.2,EcoGene:EG10487,GeneID:947182;Name=NP_417210.2;Note=plays structural role in maturation of all 3 hydrogenases;gbkey=CDS;gene=hypE;product=carbamoyl dehydratase%2C hydrogenases 1%2C2%2C3 maturation protein;protein_id=NP_417210.2;transl_table=11 NC_000913.3 RefSeq gene 2854338 2856416 . + . ID=gene2791;Dbxref=EcoGene:EG10301,GeneID:947181;Name=fhlA;gbkey=Gene;gene=fhlA;gene_biotype=protein_coding;gene_synonym=ECK2726,fhl,JW2701;locus_tag=b2731 NC_000913.3 RefSeq CDS 2854338 2856416 . + 0 ID=cds2693;Parent=gene2791;Dbxref=ASAP:ABE-0008971,UniProtKB/Swiss-Prot:P19323,Genbank:NP_417211.1,EcoGene:EG10301,GeneID:947181;Name=NP_417211.1;Note=formate hydrogen-lyase transcriptional activator for fdhF%2C hyc and hyp operons;gbkey=CDS;gene=fhlA;product=formate hydrogenlyase transcriptional activator;protein_id=NP_417211.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2856426 2856449 . + . ID=id340;Note=REP198 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2856453 2856806 . - . ID=gene2792;Dbxref=EcoGene:EG11287,GeneID:947187;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;gene_synonym=ECK2727,JW2702;locus_tag=b2732 NC_000913.3 RefSeq CDS 2856453 2856806 . - 0 ID=cds2694;Parent=gene2792;Dbxref=ASAP:ABE-0008973,UniProtKB/Swiss-Prot:P25728,Genbank:NP_417212.1,EcoGene:EG11287,GeneID:947187;Name=NP_417212.1;gbkey=CDS;gene=ygbA;product=uncharacterized protein;protein_id=NP_417212.1;transl_table=11 NC_000913.3 RefSeq gene 2857093 2859654 . + . ID=gene2793;Dbxref=EcoGene:EG10625,GeneID:947206;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;gene_synonym=ant,ECK2728,fdv,JW2703,plm;locus_tag=b2733 NC_000913.3 RefSeq CDS 2857093 2859654 . + 0 ID=cds2695;Parent=gene2793;Dbxref=ASAP:ABE-0008977,UniProtKB/Swiss-Prot:P23909,Genbank:NP_417213.1,EcoGene:EG10625,GeneID:947206;Name=NP_417213.1;Note=methyl-directed mismatch repair;gbkey=CDS;gene=mutS;product=methyl-directed mismatch repair protein;protein_id=NP_417213.1;transl_table=11 NC_000913.3 RefSeq gene 2859760 2860416 . + . ID=gene2794;Dbxref=EcoGene:EG13102,GeneID:947196;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;gene_synonym=ECK2729,JW2704,prpB,ygbH;locus_tag=b2734 NC_000913.3 RefSeq CDS 2859760 2860416 . + 0 ID=cds2696;Parent=gene2794;Dbxref=ASAP:ABE-0008980,UniProtKB/Swiss-Prot:P55799,Genbank:NP_417214.1,EcoGene:EG13102,GeneID:947196;Name=NP_417214.1;Note=protein phosphatase 2;gbkey=CDS;gene=pphB;product=serine/threonine-specific protein phosphatase 2;protein_id=NP_417214.1;transl_table=11 NC_000913.3 RefSeq gene 2860467 2861234 . - . ID=gene2795;Dbxref=EcoGene:EG13103,GeneID:947204;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;gene_synonym=ECK2730,JW2705;locus_tag=b2735 NC_000913.3 RefSeq CDS 2860467 2861234 . - 0 ID=cds2697;Parent=gene2795;Dbxref=ASAP:ABE-0008982,UniProtKB/Swiss-Prot:P52598,Genbank:NP_417215.2,EcoGene:EG13103,GeneID:947204;Name=NP_417215.2;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=ygbI;product=DeoR family putative transcriptional regulator;protein_id=NP_417215.2;transl_table=11 NC_000913.3 RefSeq gene 2861430 2862338 . + . ID=gene2796;Dbxref=EcoGene:EG13104,GeneID:947200;Name=ygbJ;gbkey=Gene;gene=ygbJ;gene_biotype=protein_coding;gene_synonym=ECK2731,JW2706;locus_tag=b2736 NC_000913.3 RefSeq CDS 2861430 2862338 . + 0 ID=cds2698;Parent=gene2796;Dbxref=ASAP:ABE-0008986,UniProtKB/Swiss-Prot:Q46888,Genbank:NP_417216.1,EcoGene:EG13104,GeneID:947200;Name=NP_417216.1;Note=putative dehydrogenase;gbkey=CDS;gene=ygbJ;product=putative dehydrogenase;protein_id=NP_417216.1;transl_table=11 NC_000913.3 RefSeq gene 2862335 2863501 . + . ID=gene2797;Dbxref=EcoGene:EG13105,GeneID:947199;Name=ygbK;gbkey=Gene;gene=ygbK;gene_biotype=protein_coding;gene_synonym=ECK2732,JW2707;locus_tag=b2737 NC_000913.3 RefSeq CDS 2862335 2863501 . + 0 ID=cds2699;Parent=gene2797;Dbxref=ASAP:ABE-0008988,UniProtKB/Swiss-Prot:Q46889,Genbank:NP_417217.1,EcoGene:EG13105,GeneID:947199;Name=NP_417217.1;gbkey=CDS;gene=ygbK;product=FliA-regulated DUF1537 family protein;protein_id=NP_417217.1;transl_table=11 NC_000913.3 RefSeq gene 2863593 2864231 . + . ID=gene2798;Dbxref=EcoGene:EG13106,GeneID:947197;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;gene_synonym=ECK2733,JW2708;locus_tag=b2738 NC_000913.3 RefSeq CDS 2863593 2864231 . + 0 ID=cds2700;Parent=gene2798;Dbxref=ASAP:ABE-0008994,UniProtKB/Swiss-Prot:Q46890,Genbank:NP_417218.1,EcoGene:EG13106,GeneID:947197;Name=NP_417218.1;Note=putative epimerase/aldolase;gbkey=CDS;gene=ygbL;product=putative class II aldolase;protein_id=NP_417218.1;transl_table=11 NC_000913.3 RefSeq gene 2864236 2865012 . + . ID=gene2799;Dbxref=EcoGene:EG13107,GeneID:947207;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;gene_synonym=ECK2734,JW2709;locus_tag=b2739 NC_000913.3 RefSeq CDS 2864236 2865012 . + 0 ID=cds2701;Parent=gene2799;Dbxref=ASAP:ABE-0008996,UniProtKB/Swiss-Prot:Q46891,Genbank:NP_417219.1,EcoGene:EG13107,GeneID:947207;Name=NP_417219.1;gbkey=CDS;gene=ygbM;product=putative hydroxypyruvate isomerase;protein_id=NP_417219.1;transl_table=11 NC_000913.3 RefSeq gene 2865101 2866465 . + . ID=gene2800;Dbxref=EcoGene:EG13108,GeneID:947208;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;gene_synonym=ECK2735,JW2710;locus_tag=b2740 NC_000913.3 RefSeq CDS 2865101 2866465 . + 0 ID=cds2702;Parent=gene2800;Dbxref=ASAP:ABE-0008999,UniProtKB/Swiss-Prot:Q46892,Genbank:NP_417220.1,EcoGene:EG13108,GeneID:947208;Name=NP_417220.1;Note=putative transport protein;gbkey=CDS;gene=ygbN;product=putative transporter;protein_id=NP_417220.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2866479 2866496 . + . ID=id341;Note=REP199 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2866559 2867551 . - . ID=gene2801;Dbxref=EcoGene:EG10510,GeneID:947210;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;gene_synonym=abrD,appR,csi2,dpeB,ECK2736,JW5437,katF,nur,otsX,sigS;locus_tag=b2741 NC_000913.3 RefSeq CDS 2866559 2867551 . - 0 ID=cds2703;Parent=gene2801;Dbxref=ASAP:ABE-0009001,UniProtKB/Swiss-Prot:P13445,Genbank:NP_417221.1,EcoGene:EG10510,GeneID:947210;Name=NP_417221.1;Note=RNA polymerase%2C sigma S (sigma38) factor%3B synthesis of many growth phase related proteins;gbkey=CDS;gene=rpoS;product=RNA polymerase%2C sigma S (sigma 38) factor;protein_id=NP_417221.1;transl_table=11 NC_000913.3 RefSeq gene 2867614 2868753 . - . ID=gene2802;Dbxref=EcoGene:EG12111,GeneID:947011;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;gene_synonym=ECK2737,JW2712;locus_tag=b2742 NC_000913.3 RefSeq CDS 2867614 2868753 . - 0 ID=cds2704;Parent=gene2802;Dbxref=ASAP:ABE-0009004,UniProtKB/Swiss-Prot:P0ADA3,Genbank:NP_417222.1,EcoGene:EG12111,GeneID:947011;Name=NP_417222.1;Note=lipoprotein;gbkey=CDS;gene=nlpD;product=activator of AmiC murein hydrolase activity%2C lipoprotein;protein_id=NP_417222.1;transl_table=11 NC_000913.3 RefSeq gene 2868893 2869519 . - . ID=gene2803;Dbxref=EcoGene:EG10689,GeneID:944923;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;gene_synonym=ECK2738,JW2713;locus_tag=b2743 NC_000913.3 RefSeq CDS 2868893 2869519 . - 0 ID=cds2705;Parent=gene2803;Dbxref=ASAP:ABE-0009006,UniProtKB/Swiss-Prot:P0A7A5,Genbank:NP_417223.1,EcoGene:EG10689,GeneID:944923;Name=NP_417223.1;gbkey=CDS;gene=pcm;product=L-isoaspartate protein carboxylmethyltransferase type II;protein_id=NP_417223.1;transl_table=11 NC_000913.3 RefSeq gene 2869513 2870274 . - . ID=gene2804;Dbxref=EcoGene:EG11817,GeneID:947211;Name=umpG;gbkey=Gene;gene=umpG;gene_biotype=protein_coding;gene_synonym=ECK2739,JW2714,surE,ygbC;locus_tag=b2744 NC_000913.3 RefSeq CDS 2869513 2870274 . - 0 ID=cds2706;Parent=gene2804;Dbxref=ASAP:ABE-0009008,UniProtKB/Swiss-Prot:P0A840,Genbank:NP_417224.1,EcoGene:EG11817,GeneID:947211;Name=NP_417224.1;Note=survival protein;gbkey=CDS;gene=umpG;product=broad specificity 5'(3')-nucleotidase and polyphosphatase;protein_id=NP_417224.1;transl_table=11 NC_000913.3 RefSeq gene 2870255 2871304 . - . ID=gene2805;Dbxref=EcoGene:EG13109,GeneID:947214;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ECK2740,JW2715,ygbO;locus_tag=b2745 NC_000913.3 RefSeq CDS 2870255 2871304 . - 0 ID=cds2707;Parent=gene2805;Dbxref=ASAP:ABE-0009011,UniProtKB/Swiss-Prot:Q57261,Genbank:NP_417225.1,EcoGene:EG13109,GeneID:947214;Name=NP_417225.1;Note=putative hydrogenase subunit;gbkey=CDS;gene=truD;product=tRNA(Glu) pseudouridine(13) synthase;protein_id=NP_417225.1;transl_table=11 NC_000913.3 RefSeq gene 2871301 2871780 . - . ID=gene2806;Dbxref=EcoGene:EG11816,GeneID:945057;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;gene_synonym=ECK2741,JW2716,ygbB;locus_tag=b2746 NC_000913.3 RefSeq CDS 2871301 2871780 . - 0 ID=cds2708;Parent=gene2806;Dbxref=ASAP:ABE-0009013,UniProtKB/Swiss-Prot:P62617,Genbank:NP_417226.1,EcoGene:EG11816,GeneID:945057;Name=NP_417226.1;gbkey=CDS;gene=ispF;product=2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=NP_417226.1;transl_table=11 NC_000913.3 RefSeq gene 2871780 2872490 . - . ID=gene2807;Dbxref=EcoGene:EG13110,GeneID:948269;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;gene_synonym=ECK2742,JW2717,ygbP;locus_tag=b2747 NC_000913.3 RefSeq CDS 2871780 2872490 . - 0 ID=cds2709;Parent=gene2807;Dbxref=ASAP:ABE-0009017,UniProtKB/Swiss-Prot:Q46893,Genbank:NP_417227.1,EcoGene:EG13110,GeneID:948269;Name=NP_417227.1;gbkey=CDS;gene=ispD;product=4-diphosphocytidyl-2C-methyl-D-erythritol synthase;protein_id=NP_417227.1;transl_table=11 NC_000913.3 RefSeq gene 2872509 2872820 . - . ID=gene2808;Dbxref=EcoGene:EG13111,GeneID:946033;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;gene_synonym=ECK2743,JW2718,ygbQ;locus_tag=b2748 NC_000913.3 RefSeq CDS 2872509 2872820 . - 0 ID=cds2710;Parent=gene2808;Dbxref=ASAP:ABE-0009019,UniProtKB/Swiss-Prot:P0A6S5,Genbank:NP_417228.1,EcoGene:EG13111,GeneID:946033;Name=NP_417228.1;gbkey=CDS;gene=ftsB;product=cell division protein;protein_id=NP_417228.1;transl_table=11 NC_000913.3 RefSeq gene 2873014 2873337 . - . ID=gene2809;Dbxref=EcoGene:EG12707,GeneID:947268;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;gene_synonym=ECK2744,JW2719;locus_tag=b2749 NC_000913.3 RefSeq CDS 2873014 2873337 . - 0 ID=cds2711;Parent=gene2809;Dbxref=ASAP:ABE-0009021,UniProtKB/Swiss-Prot:P46141,Genbank:NP_417229.1,EcoGene:EG12707,GeneID:947268;Name=NP_417229.1;Note=putative cytochrome oxidase subunit;gbkey=CDS;gene=ygbE;product=DUF3561 family inner membrane protein;protein_id=NP_417229.1;transl_table=11 NC_000913.3 RefSeq gene 2873387 2873992 . - . ID=gene2810;Dbxref=EcoGene:EG10185,GeneID:947221;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;gene_synonym=ECK2745,JW2720;locus_tag=b2750 NC_000913.3 RefSeq CDS 2873387 2873992 . - 0 ID=cds2712;Parent=gene2810;Dbxref=ASAP:ABE-0009023,UniProtKB/Swiss-Prot:P0A6J1,Genbank:NP_417230.1,EcoGene:EG10185,GeneID:947221;Name=NP_417230.1;gbkey=CDS;gene=cysC;product=adenosine 5'-phosphosulfate kinase;protein_id=NP_417230.1;transl_table=11 NC_000913.3 RefSeq gene 2873992 2875419 . - . ID=gene2811;Dbxref=EcoGene:EG10194,GeneID:947219;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;gene_synonym=ECK2746,JW2721;locus_tag=b2751 NC_000913.3 RefSeq CDS 2873992 2875419 . - 0 ID=cds2713;Parent=gene2811;Dbxref=ASAP:ABE-0009026,UniProtKB/Swiss-Prot:P23845,Genbank:NP_417231.1,EcoGene:EG10194,GeneID:947219;Name=NP_417231.1;Note=ATP-sulfurylase (ATP:sulfate adenylyltransferase)%2C subunit 1%2C probably a GTPase;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase%2C subunit 1;protein_id=NP_417231.1;transl_table=11 NC_000913.3 RefSeq gene 2875421 2876329 . - . ID=gene2812;Dbxref=EcoGene:EG10186,GeneID:947217;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;gene_synonym=ECK2747,JW2722;locus_tag=b2752 NC_000913.3 RefSeq CDS 2875421 2876329 . - 0 ID=cds2714;Parent=gene2812;Dbxref=ASAP:ABE-0009029,UniProtKB/Swiss-Prot:P21156,Genbank:NP_417232.1,EcoGene:EG10186,GeneID:947217;Name=NP_417232.1;Note=ATP:sulfurylase (ATP:sulfate adenylyltransferase)%2C subunit 2;gbkey=CDS;gene=cysD;product=sulfate adenylyltransferase%2C subunit 2;protein_id=NP_417232.1;transl_table=11 NC_000913.3 RefSeq gene 2876581 2877618 . + . ID=gene2813;Dbxref=EcoGene:EG10488,GeneID:947215;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;gene_synonym=ECK2748,JW2723;locus_tag=b2753 NC_000913.3 RefSeq CDS 2876581 2877618 . + 0 ID=cds2715;Parent=gene2813;Dbxref=ASAP:ABE-0009033,UniProtKB/Swiss-Prot:P10423,Genbank:NP_417233.1,EcoGene:EG10488,GeneID:947215;Name=NP_417233.1;gbkey=CDS;gene=iap;product=aminopeptidase in alkaline phosphatase isozyme conversion;protein_id=NP_417233.1;transl_table=11 NC_000913.3 RefSeq gene 2878569 2878853 . - . ID=gene2814;Dbxref=EcoGene:EG12845,GeneID:947213;Name=ygbF;gbkey=Gene;gene=ygbF;gene_biotype=protein_coding;gene_synonym=cas2,ECK2749,JW5438;locus_tag=b2754 NC_000913.3 RefSeq CDS 2878569 2878853 . - 0 ID=cds2716;Parent=gene2814;Dbxref=ASAP:ABE-0009036,UniProtKB/Swiss-Prot:P45956,Genbank:NP_417234.2,EcoGene:EG12845,GeneID:947213;Name=NP_417234.2;gbkey=CDS;gene=ygbF;product=CRISPR adaptation ssRNA endonuclease;protein_id=NP_417234.2;transl_table=11 NC_000913.3 RefSeq gene 2878855 2879772 . - . ID=gene2815;Dbxref=EcoGene:EG13114,GeneID:947228;Name=ygbT;gbkey=Gene;gene=ygbT;gene_biotype=protein_coding;gene_synonym=cas1,ECK2750,JW2725;locus_tag=b2755 NC_000913.3 RefSeq CDS 2878855 2879772 . - 0 ID=cds2717;Parent=gene2815;Dbxref=ASAP:ABE-0009038,UniProtKB/Swiss-Prot:Q46896,Genbank:NP_417235.1,EcoGene:EG13114,GeneID:947228;Name=NP_417235.1;gbkey=CDS;gene=ygbT;product=multifunctional endonuclease Cas1%2C CRISPR adaptation protein%3B DNA repair enzyme;protein_id=NP_417235.1;transl_table=11 NC_000913.3 RefSeq gene 2879788 2880387 . - . ID=gene2816;Dbxref=EcoGene:EG13115,GeneID:947226;Name=casE;gbkey=Gene;gene=casE;gene_biotype=protein_coding;gene_synonym=cas6e,cse3,ECK2751,JW2726,ygcH;locus_tag=b2756 NC_000913.3 RefSeq CDS 2879788 2880387 . - 0 ID=cds2718;Parent=gene2816;Dbxref=ASAP:ABE-0009042,UniProtKB/Swiss-Prot:Q46897,Genbank:NP_417236.1,EcoGene:EG13115,GeneID:947226;Name=NP_417236.1;gbkey=CDS;gene=casE;product=CRISPR RNA precursor cleavage enzyme%3B CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=NP_417236.1;transl_table=11 NC_000913.3 RefSeq gene 2880374 2881048 . - . ID=gene2817;Dbxref=EcoGene:EG13116,GeneID:947225;Name=casD;gbkey=Gene;gene=casD;gene_biotype=protein_coding;gene_synonym=cas5,ECK2752,JW5844,ygcI;locus_tag=b2757 NC_000913.3 RefSeq CDS 2880374 2881048 . - 0 ID=cds2719;Parent=gene2817;Dbxref=ASAP:ABE-0009044,UniProtKB/Swiss-Prot:Q46898,Genbank:NP_417237.2,EcoGene:EG13116,GeneID:947225;Name=NP_417237.2;gbkey=CDS;gene=casD;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=NP_417237.2;transl_table=11 NC_000913.3 RefSeq gene 2881051 2882142 . - . ID=gene2818;Dbxref=EcoGene:EG13117,GeneID:947224;Name=casC;gbkey=Gene;gene=casC;gene_biotype=protein_coding;gene_synonym=cas4,cas7,cse4,ECK2753,JW2728,ygcJ;locus_tag=b2758 NC_000913.3 RefSeq CDS 2881051 2882142 . - 0 ID=cds2720;Parent=gene2818;Dbxref=ASAP:ABE-0009046,UniProtKB/Swiss-Prot:Q46899,Genbank:NP_417238.1,EcoGene:EG13117,GeneID:947224;Name=NP_417238.1;gbkey=CDS;gene=casC;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=NP_417238.1;transl_table=11 NC_000913.3 RefSeq gene 2882155 2882637 . - . ID=gene2819;Dbxref=EcoGene:EG13118,GeneID:947223;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2,ECK2754,JW2729,ygcK;locus_tag=b2759 NC_000913.3 RefSeq CDS 2882155 2882637 . - 0 ID=cds2721;Parent=gene2819;Dbxref=ASAP:ABE-0009048,UniProtKB/Swiss-Prot:P76632,Genbank:NP_417239.1,EcoGene:EG13118,GeneID:947223;Name=NP_417239.1;gbkey=CDS;gene=casB;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=NP_417239.1;transl_table=11 NC_000913.3 RefSeq gene 2882630 2884138 . - . ID=gene2820;Dbxref=EcoGene:EG13119,GeneID:947222;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1,ECK2755,JW2730,ygcL;locus_tag=b2760 NC_000913.3 RefSeq CDS 2882630 2884138 . - 0 ID=cds2722;Parent=gene2820;Dbxref=ASAP:ABE-0009050,UniProtKB/Swiss-Prot:Q46901,Genbank:NP_417240.1,EcoGene:EG13119,GeneID:947222;Name=NP_417240.1;gbkey=CDS;gene=casA;product=CRISP RNA (crRNA) containing Cascade antiviral complex protein;protein_id=NP_417240.1;transl_table=11 NC_000913.3 RefSeq gene 2884553 2887219 . - . ID=gene2821;Dbxref=EcoGene:EG12634,GeneID:947229;Name=ygcB;gbkey=Gene;gene=ygcB;gene_biotype=protein_coding;gene_synonym=cas3,ECK2756,JW2731;locus_tag=b2761 NC_000913.3 RefSeq CDS 2884553 2887219 . - 0 ID=cds2723;Parent=gene2821;Dbxref=ASAP:ABE-0009054,UniProtKB/Swiss-Prot:P38036,Genbank:NP_417241.1,EcoGene:EG12634,GeneID:947229;Name=NP_417241.1;gbkey=CDS;gene=ygcB;product=Cascade complex anti-viral R-loop helicase-annealase Cas3;protein_id=NP_417241.1;transl_table=11 NC_000913.3 RefSeq gene 2887354 2887409 . + . ID=gene2822;Dbxref=EcoGene:EG31187,GeneID:8764970;Name=sokX;gbkey=Gene;gene=sokX;gene_biotype=antisense_RNA;gene_synonym=ECK4514;locus_tag=b4701 NC_000913.3 RefSeq ncRNA 2887354 2887409 . + . ID=rna97;Parent=gene2822;Dbxref=EcoGene:EG31187,GeneID:8764970;gbkey=ncRNA;gene=sokX;ncrna_class=antisense_RNA;product=sok-related sRNA%2C function unknown NC_000913.3 RefSeq exon 2887354 2887409 . + . ID=id342;Parent=rna97;Dbxref=EcoGene:EG31187,GeneID:8764970;gbkey=ncRNA;gene=sokX;ncrna_class=antisense_RNA;product=sok-related sRNA%2C function unknown NC_000913.3 RefSeq gene 2887578 2888312 . - . ID=gene2823;Dbxref=EcoGene:EG10189,GeneID:947230;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;gene_synonym=ECK2757,JW2732;locus_tag=b2762 NC_000913.3 RefSeq CDS 2887578 2888312 . - 0 ID=cds2724;Parent=gene2823;Dbxref=ASAP:ABE-0009057,UniProtKB/Swiss-Prot:P17854,Genbank:NP_417242.1,EcoGene:EG10189,GeneID:947230;Name=NP_417242.1;gbkey=CDS;gene=cysH;product=phosphoadenosine phosphosulfate reductase%3B PAPS reductase%2C thioredoxin dependent;protein_id=NP_417242.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2888334 2888370 . + . ID=id343;Note=REP200 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2888387 2890099 . - . ID=gene2824;Dbxref=EcoGene:EG10190,GeneID:947231;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;gene_synonym=ECK2758,JW2733;locus_tag=b2763 NC_000913.3 RefSeq CDS 2888387 2890099 . - 0 ID=cds2725;Parent=gene2824;Dbxref=ASAP:ABE-0009061,UniProtKB/Swiss-Prot:P17846,Genbank:NP_417243.1,EcoGene:EG10190,GeneID:947231;Name=NP_417243.1;Note=sulfite reductase%2C alpha subunit;gbkey=CDS;gene=cysI;product=sulfite reductase%2C beta subunit%2C NAD(P)-binding%2C heme-binding;protein_id=NP_417243.1;transl_table=11 NC_000913.3 RefSeq gene 2890099 2891898 . - . ID=gene2825;Dbxref=EcoGene:EG10191,GeneID:947239;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;gene_synonym=ECK2759,JW2734;locus_tag=b2764 NC_000913.3 RefSeq CDS 2890099 2891898 . - 0 ID=cds2726;Parent=gene2825;Dbxref=ASAP:ABE-0009063,UniProtKB/Swiss-Prot:P38038,Genbank:NP_417244.1,EcoGene:EG10191,GeneID:947239;Name=NP_417244.1;Note=sulfite reductase (NADPH)%2C flavoprotein beta subunit;gbkey=CDS;gene=cysJ;product=sulfite reductase%2C alpha subunit%2C flavoprotein;protein_id=NP_417244.1;transl_table=11 NC_000913.3 RefSeq gene 2892214 2892579 . + . ID=gene2826;Dbxref=EcoGene:EG13120,GeneID:945123;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;gene_synonym=ECK2760,JW2735,sscR,ygcM;locus_tag=b2765 NC_000913.3 RefSeq CDS 2892214 2892579 . + 0 ID=cds2727;Parent=gene2826;Dbxref=ASAP:ABE-0009068,UniProtKB/Swiss-Prot:P65870,Genbank:NP_417245.1,EcoGene:EG13120,GeneID:945123;Name=NP_417245.1;Note=putative 6-pyruvoyl tetrahydrobiopterin synthase;gbkey=CDS;gene=queD;product=6-pyruvoyl tetrahydrobiopterin synthase (PTPS);protein_id=NP_417245.1;transl_table=11 NC_000913.3 RefSeq gene 2892657 2893928 . + . ID=gene2827;Dbxref=EcoGene:EG13121,GeneID:946114;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;gene_synonym=ECK2761,JW2736;locus_tag=b2766 NC_000913.3 RefSeq CDS 2892657 2893928 . + 0 ID=cds2728;Parent=gene2827;Dbxref=ASAP:ABE-0009070,UniProtKB/Swiss-Prot:Q46904,Genbank:NP_417246.4,EcoGene:EG13121,GeneID:946114;Name=NP_417246.4;gbkey=CDS;gene=ygcN;product=putative oxidoreductase;protein_id=NP_417246.4;transl_table=11 NC_000913.3 RefSeq gene 2893919 2894179 . + . ID=gene2828;Dbxref=EcoGene:EG13122,GeneID:945120;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;gene_synonym=ECK2762,JW2737;locus_tag=b2767 NC_000913.3 RefSeq CDS 2893919 2894179 . + 0 ID=cds2729;Parent=gene2828;Dbxref=ASAP:ABE-0009072,UniProtKB/Swiss-Prot:Q46905,Genbank:NP_417247.2,EcoGene:EG13122,GeneID:945120;Name=NP_417247.2;gbkey=CDS;gene=ygcO;product=putative 4Fe-4S cluster-containing protein;protein_id=NP_417247.2;transl_table=11 NC_000913.3 RefSeq gene 2894196 2894771 . + . ID=gene2829;Dbxref=EcoGene:EG13123,GeneID:947536;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;gene_synonym=ECK2763,JW2738;locus_tag=b2768 NC_000913.3 RefSeq CDS 2894196 2894771 . + 0 ID=cds2730;Parent=gene2829;Dbxref=ASAP:ABE-0009074,UniProtKB/Swiss-Prot:Q46906,Genbank:NP_417248.1,EcoGene:EG13123,GeneID:947536;Name=NP_417248.1;Note=putative anti-terminator regulatory protein;gbkey=CDS;gene=ygcP;product=putative antiterminator regulatory protein;protein_id=NP_417248.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2894808 2894874 . + . ID=id344;Note=REP201 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2894919 2895779 . - . ID=gene2830;Dbxref=EcoGene:EG13124,GeneID:946413;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;gene_synonym=ECK2764,JW5440;locus_tag=b2769 NC_000913.3 RefSeq CDS 2894919 2895779 . - 0 ID=cds2731;Parent=gene2830;Dbxref=ASAP:ABE-0009077,UniProtKB/Swiss-Prot:Q46907,Genbank:NP_417249.4,EcoGene:EG13124,GeneID:946413;Name=NP_417249.4;Note=putative flavoprotein;gbkey=CDS;gene=ygcQ;product=putative flavoprotein;protein_id=NP_417249.4;transl_table=11 NC_000913.3 RefSeq gene 2895776 2896555 . - . ID=gene2831;Dbxref=EcoGene:EG13125,GeneID:947240;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;gene_synonym=ECK2765,JW5441;locus_tag=b2770 NC_000913.3 RefSeq CDS 2895776 2896555 . - 0 ID=cds2732;Parent=gene2831;Dbxref=ASAP:ABE-0009079,UniProtKB/Swiss-Prot:Q46908,Genbank:NP_417250.4,EcoGene:EG13125,GeneID:947240;Name=NP_417250.4;Note=putative transport protein;gbkey=CDS;gene=ygcR;product=putative flavoprotein;protein_id=NP_417250.4;transl_table=11 NC_000913.3 RefSeq gene 2896533 2897870 . - . ID=gene2832;Dbxref=EcoGene:EG13126,GeneID:947238;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;gene_synonym=ECK2766,JW5845;locus_tag=b2771 NC_000913.3 RefSeq CDS 2896533 2897870 . - 0 ID=cds2733;Parent=gene2832;Dbxref=ASAP:ABE-0009082,UniProtKB/Swiss-Prot:Q46909,Genbank:NP_417251.2,EcoGene:EG13126,GeneID:947238;Name=NP_417251.2;Note=putative transport protein;gbkey=CDS;gene=ygcS;product=putative MFS sugar transporter%3B membrane protein;protein_id=NP_417251.2;transl_table=11 NC_000913.3 RefSeq gene 2897964 2899418 . - . ID=gene2833;Dbxref=EcoGene:EG13128,GeneID:2847709;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;gene_synonym=ECK2767,JW5442,ygcT,ygcV;locus_tag=b4463 NC_000913.3 RefSeq CDS 2897964 2899418 . - 0 ID=cds2734;Parent=gene2833;Dbxref=ASAP:ABE-0174094,UniProtKB/Swiss-Prot:Q46911,Genbank:YP_026183.1,EcoGene:EG13128,GeneID:2847709;Name=YP_026183.1;gbkey=CDS;gene=ygcU;product=putative FAD-linked oxidoreductase;protein_id=YP_026183.1;transl_table=11 NC_000913.3 RefSeq gene 2899488 2900273 . - . ID=gene2834;Dbxref=EcoGene:EG13130,GeneID:947232;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;gene_synonym=ECK2768,JW5443;locus_tag=b2774 NC_000913.3 RefSeq CDS 2899488 2900273 . - 0 ID=cds2735;Parent=gene2834;Dbxref=ASAP:ABE-0009088,UniProtKB/Swiss-Prot:P76633,Genbank:NP_417254.4,EcoGene:EG13130,GeneID:947232;Name=NP_417254.4;Note=putative oxidoreductase;gbkey=CDS;gene=ygcW;product=putative SDR family oxidoreductase;protein_id=NP_417254.4;transl_table=11 NC_000913.3 RefSeq gene 2900592 2901869 . + . ID=gene2835;Dbxref=EcoGene:EG13174,GeneID:947248;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;gene_synonym=ECK2769,JW2746,yqcF;locus_tag=b2775 NC_000913.3 RefSeq CDS 2900592 2901869 . + 0 ID=cds2736;Parent=gene2835;Dbxref=ASAP:ABE-0009095,UniProtKB/Swiss-Prot:P77031,Genbank:NP_417255.1,EcoGene:EG13174,GeneID:947248;Name=NP_417255.1;Note=putative transport protein;gbkey=CDS;gene=yqcE;product=putative MFS transporter%2C inner membrane protein;protein_id=NP_417255.1;transl_table=11 NC_000913.3 RefSeq gene 2901896 2903374 . + . ID=gene2836;Dbxref=EcoGene:EG13033,GeneID:946193;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;gene_synonym=ECK2770,JW5444;locus_tag=b2776 NC_000913.3 RefSeq CDS 2901896 2903374 . + 0 ID=cds2737;Parent=gene2836;Dbxref=ASAP:ABE-0009097,UniProtKB/Swiss-Prot:P55138,Genbank:NP_417256.1,EcoGene:EG13033,GeneID:946193;Name=NP_417256.1;Note=putative kinase;gbkey=CDS;gene=ygcE;product=putative kinase;protein_id=NP_417256.1;transl_table=11 NC_000913.3 RefSeq gene 2904747 2905418 . - . ID=gene2837;Dbxref=EcoGene:EG13034,GeneID:947527;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;gene_synonym=ECK2771,JW2748,ygcF;locus_tag=b2777 NC_000913.3 RefSeq CDS 2904747 2905418 . - 0 ID=cds2738;Parent=gene2837;Dbxref=ASAP:ABE-0009101,UniProtKB/Swiss-Prot:P64554,Genbank:NP_417257.1,EcoGene:EG13034,GeneID:947527;Name=NP_417257.1;gbkey=CDS;gene=queE;product=7-carboxy-7-deazaguanine synthase%3B queosine biosynthesis;protein_id=NP_417257.1;transl_table=11 NC_000913.3 RefSeq gene 2905557 2905697 . + . ID=gene2838;Dbxref=EcoGene:EG14487,GeneID:7751618;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;gene_synonym=ECK4497;locus_tag=b4682 NC_000913.3 RefSeq CDS 2905557 2905697 . + 0 ID=cds2739;Parent=gene2838;Dbxref=UniProtKB/Swiss-Prot:C1P612,Genbank:YP_002791252.1,EcoGene:EG14487,GeneID:7751618;Name=YP_002791252.1;gbkey=CDS;gene=yqcG;product=membrane stress resistance protein;protein_id=YP_002791252.1;transl_table=11 NC_000913.3 RefSeq gene 2905711 2906583 . + . ID=gene2839;Dbxref=EcoGene:EG13035,GeneID:945247;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;gene_synonym=ECK2772,JW5445;locus_tag=b2778 NC_000913.3 RefSeq CDS 2905711 2906583 . + 0 ID=cds2740;Parent=gene2839;Dbxref=ASAP:ABE-0009108,UniProtKB/Swiss-Prot:P55140,Genbank:NP_417258.4,EcoGene:EG13035,GeneID:945247;Name=NP_417258.4;gbkey=CDS;gene=ygcG;product=TPM domain protein%2C putative phosphatase;protein_id=NP_417258.4;transl_table=11 NC_000913.3 RefSeq gene 2906643 2907941 . - . ID=gene2840;Dbxref=EcoGene:EG10258,GeneID:945032;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;gene_synonym=ECK2773,JW2750;locus_tag=b2779 NC_000913.3 RefSeq CDS 2906643 2907941 . - 0 ID=cds2741;Parent=gene2840;Dbxref=ASAP:ABE-0009110,UniProtKB/Swiss-Prot:P0A6P9,Genbank:NP_417259.1,EcoGene:EG10258,GeneID:945032;Name=NP_417259.1;gbkey=CDS;gene=eno;product=enolase;protein_id=NP_417259.1;transl_table=11 NC_000913.3 RefSeq gene 2908029 2909666 . - . ID=gene2841;Dbxref=EcoGene:EG10810,GeneID:946116;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;gene_synonym=ECK2774,JW2751;locus_tag=b2780 NC_000913.3 RefSeq CDS 2908029 2909666 . - 0 ID=cds2742;Parent=gene2841;Dbxref=ASAP:ABE-0009112,UniProtKB/Swiss-Prot:P0A7E5,Genbank:NP_417260.1,EcoGene:EG10810,GeneID:946116;Name=NP_417260.1;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=NP_417260.1;transl_table=11 NC_000913.3 RefSeq gene 2909894 2910685 . - . ID=gene2842;Dbxref=EcoGene:EG10572,GeneID:947254;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;gene_synonym=ECK2775,JW2752;locus_tag=b2781 NC_000913.3 RefSeq CDS 2909894 2910685 . - 0 ID=cds2743;Parent=gene2842;Dbxref=ASAP:ABE-0009117,UniProtKB/Swiss-Prot:P0AEY3,Genbank:NP_417261.1,EcoGene:EG10572,GeneID:947254;Name=NP_417261.1;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=NP_417261.1;transl_table=11 NC_000913.3 RefSeq gene 2910756 2911091 . - . ID=gene2843;Dbxref=EcoGene:EG11249,GeneID:947252;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;gene_synonym=chpA,chpAK,ECK2776,JW2753;locus_tag=b2782 NC_000913.3 RefSeq CDS 2910756 2911091 . - 0 ID=cds2744;Parent=gene2843;Dbxref=ASAP:ABE-0009119,UniProtKB/Swiss-Prot:P0AE70,Genbank:NP_417262.1,EcoGene:EG11249,GeneID:947252;Name=NP_417262.1;Note=probable growth inhibitor%2C PemK-like%2C autoregulated;gbkey=CDS;gene=mazF;product=mRNA interferase toxin%2C antitoxin is MazE;protein_id=NP_417262.1;transl_table=11 NC_000913.3 RefSeq gene 2911091 2911339 . - . ID=gene2844;Dbxref=EcoGene:EG10571,GeneID:947245;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;gene_synonym=chpAI,chpR,ECK2777,JW2754,tasA;locus_tag=b2783 NC_000913.3 RefSeq CDS 2911091 2911339 . - 0 ID=cds2745;Parent=gene2844;Dbxref=ASAP:ABE-0009122,UniProtKB/Swiss-Prot:P0AE72,Genbank:NP_417263.1,EcoGene:EG10571,GeneID:947245;Name=NP_417263.1;Note=suppressor of inhibitory function of ChpA%2C PemI-like%2C autoregulated;gbkey=CDS;gene=mazE;product=antitoxin of the ChpA-ChpR toxin-antitoxin system;protein_id=NP_417263.1;transl_table=11 NC_000913.3 RefSeq gene 2911417 2913651 . - . ID=gene2845;Dbxref=EcoGene:EG10835,GeneID:947244;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;gene_synonym=ECK2778,JW2755,RC;locus_tag=b2784 NC_000913.3 RefSeq CDS 2911417 2913651 . - 0 ID=cds2746;Parent=gene2845;Dbxref=ASAP:ABE-0009125,UniProtKB/Swiss-Prot:P0AG20,Genbank:NP_417264.1,EcoGene:EG10835,GeneID:947244;Name=NP_417264.1;Note=(p)ppGpp synthetase I (GTP pyrophosphokinase)%3B regulation of RNA synthesis%3B stringent factor;gbkey=CDS;gene=relA;product=(p)ppGpp synthetase I/GTP pyrophosphokinase;protein_id=NP_417264.1;transl_table=11 NC_000913.3 RefSeq gene 2913699 2915000 . - . ID=gene2846;Dbxref=EcoGene:EG11247,GeneID:947243;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;gene_synonym=ECK2779,JW2756,rumA,ygcA;locus_tag=b2785 NC_000913.3 RefSeq CDS 2913699 2915000 . - 0 ID=cds2747;Parent=gene2846;Dbxref=ASAP:ABE-0009127,UniProtKB/Swiss-Prot:P55135,Genbank:NP_417265.1,EcoGene:EG11247,GeneID:947243;Name=NP_417265.1;gbkey=CDS;gene=rlmD;product=23S rRNA m(5)U1939 methyltransferase%2C SAM-dependent;protein_id=NP_417265.1;transl_table=11 NC_000913.3 RefSeq gene 2915057 2917813 . + . ID=gene2847;Dbxref=EcoGene:EG11367,GeneID:947255;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;gene_synonym=airS,ECK2780,gacC,JW2757;locus_tag=b2786 NC_000913.3 RefSeq CDS 2915057 2917813 . + 0 ID=cds2748;Parent=gene2847;Dbxref=ASAP:ABE-0009131,UniProtKB/Swiss-Prot:P0AEC5,Genbank:NP_417266.1,EcoGene:EG11367,GeneID:947255;Name=NP_417266.1;Note=sensor-regulator%2C activates OmpR by phophorylation;gbkey=CDS;gene=barA;product=hybrid sensory histidine kinase%2C in two-component regulatory system with UvrY;protein_id=NP_417266.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2917888 2917982 . + . ID=id345;Note=RIP202 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2918045 2919385 . - . ID=gene2848;Dbxref=EcoGene:EG13167,GeneID:947258;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;gene_synonym=ECK2781,JW2758,ygcX;locus_tag=b2787 NC_000913.3 RefSeq CDS 2918045 2919385 . - 0 ID=cds2749;Parent=gene2848;Dbxref=ASAP:ABE-0009134,UniProtKB/Swiss-Prot:P0AES2,Genbank:NP_417267.1,EcoGene:EG13167,GeneID:947258;Name=NP_417267.1;Note=(D)-glucarate dehydratase 1~(L)-idarate dehydratase~(L)-idarate epimerase~(D)-glucarate epimerase;gbkey=CDS;gene=gudD;product=D-glucarate dehydratase 1;protein_id=NP_417267.1;transl_table=11 NC_000913.3 RefSeq gene 2919406 2920746 . - . ID=gene2849;Dbxref=EcoGene:EG13168,GeneID:947261;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;gene_synonym=ECK2782,JW2759,ygcY;locus_tag=b2788 NC_000913.3 RefSeq CDS 2919406 2920746 . - 0 ID=cds2750;Parent=gene2849;Dbxref=ASAP:ABE-0009136,UniProtKB/Swiss-Prot:Q46915,Genbank:NP_417268.1,EcoGene:EG13168,GeneID:947261;Name=NP_417268.1;Note=putative (D)-glucarate dehydratase 2;gbkey=CDS;gene=gudX;product=glucarate dehydratase-related protein%2C substrate unknown;protein_id=NP_417268.1;transl_table=11 NC_000913.3 RefSeq gene 2920748 2922100 . - . ID=gene2850;Dbxref=EcoGene:EG13169,GeneID:947265;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;gene_synonym=ECK2783,JW2760,ygcZ;locus_tag=b2789 NC_000913.3 RefSeq CDS 2920748 2922100 . - 0 ID=cds2751;Parent=gene2850;Dbxref=ASAP:ABE-0009139,UniProtKB/Swiss-Prot:Q46916,Genbank:NP_417269.1,EcoGene:EG13169,GeneID:947265;Name=NP_417269.1;Note=putative D-glucarate permease (MFS family);gbkey=CDS;gene=gudP;product=putative D-glucarate transporter;protein_id=NP_417269.1;transl_table=11 NC_000913.3 RefSeq gene 2922535 2922984 . - . ID=gene2851;Dbxref=EcoGene:EG13170,GeneID:947151;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;gene_synonym=ECK2784,JW2761;locus_tag=b2790 NC_000913.3 RefSeq CDS 2922535 2922984 . - 0 ID=cds2752;Parent=gene2851;Dbxref=ASAP:ABE-0009142,UniProtKB/Swiss-Prot:P65367,Genbank:NP_417270.1,EcoGene:EG13170,GeneID:947151;Name=NP_417270.1;gbkey=CDS;gene=yqcA;product=short-chain flavodoxin%2C FMN-binding;protein_id=NP_417270.1;transl_table=11 NC_000913.3 RefSeq gene 2923002 2923784 . - . ID=gene2852;Dbxref=EcoGene:EG13171,GeneID:947242;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;gene_synonym=ECK2785,JW2762,yqcB;locus_tag=b2791 NC_000913.3 RefSeq CDS 2923002 2923784 . - 0 ID=cds2753;Parent=gene2852;Dbxref=ASAP:ABE-0009147,UniProtKB/Swiss-Prot:P0AA41,Genbank:NP_417271.1,EcoGene:EG13171,GeneID:947242;Name=NP_417271.1;gbkey=CDS;gene=truC;product=tRNA(Ile1%2CAsp) pseudouridine(65) synthase;protein_id=NP_417271.1;transl_table=11 NC_000913.3 RefSeq gene 2923784 2924113 . - . ID=gene2853;Dbxref=EcoGene:EG13172,GeneID:946027;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;gene_synonym=ECK2786,JW2763;locus_tag=b2792 NC_000913.3 RefSeq CDS 2923784 2924113 . - 0 ID=cds2754;Parent=gene2853;Dbxref=ASAP:ABE-0009152,UniProtKB/Swiss-Prot:Q46919,Genbank:NP_417272.1,EcoGene:EG13172,GeneID:946027;Name=NP_417272.1;gbkey=CDS;gene=yqcC;product=DUF446 family protein;protein_id=NP_417272.1;transl_table=11 NC_000913.3 RefSeq gene 2924156 2924524 . - . ID=gene2854;Dbxref=EcoGene:EG31119,GeneID:2847719;Name=csrB;gbkey=Gene;gene=csrB;gene_biotype=ncRNA;gene_synonym=ECK2787,JWR0062;locus_tag=b4408 NC_000913.3 RefSeq ncRNA 2924156 2924524 . - . ID=rna98;Parent=gene2854;Dbxref=ASAP:ABE-0047213,EcoGene:EG31119,GeneID:2847719;Note=CsrB regulatory RNA~binds global regulatory protein CsrA%2C antagonizing CsrA regulation%2C blocking the CsrA binding of glgC mRNA;gbkey=ncRNA;gene=csrB;ncrna_class=other;product=CsrA-binding sRNA%2C antagonizing CsrA regulation NC_000913.3 RefSeq exon 2924156 2924524 . - . ID=id346;Parent=rna98;Dbxref=ASAP:ABE-0047213,EcoGene:EG31119,GeneID:2847719;Note=CsrB regulatory RNA~binds global regulatory protein CsrA%2C antagonizing CsrA regulation%2C blocking the CsrA binding of glgC mRNA;gbkey=ncRNA;gene=csrB;ncrna_class=other;product=CsrA-binding sRNA%2C antagonizing CsrA regulation NC_000913.3 RefSeq gene 2924735 2925280 . - . ID=gene2855;Dbxref=EcoGene:EG12959,GeneID:947271;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;gene_synonym=ECK2788,JW2764,ydr;locus_tag=b2793 NC_000913.3 RefSeq CDS 2924735 2925280 . - 0 ID=cds2755;Parent=gene2855;Dbxref=ASAP:ABE-0009154,UniProtKB/Swiss-Prot:P0A8U0,Genbank:NP_417273.1,EcoGene:EG12959,GeneID:947271;Name=NP_417273.1;Note=interacts with secY;gbkey=CDS;gene=syd;product=SecY-interacting protein;protein_id=NP_417273.1;transl_table=11 NC_000913.3 RefSeq gene 2925348 2926196 . + . ID=gene2856;Dbxref=EcoGene:EG13173,GeneID:947270;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;gene_synonym=ECK2789,JW2765,yqcD;locus_tag=b2794 NC_000913.3 RefSeq CDS 2925348 2926196 . + 0 ID=cds2756;Parent=gene2856;Dbxref=ASAP:ABE-0009162,UniProtKB/Swiss-Prot:Q46920,Genbank:NP_417274.1,EcoGene:EG13173,GeneID:947270;Name=NP_417274.1;gbkey=CDS;gene=queF;product=7-cyano-7-deazaguanine reductase (NADPH-dependent);protein_id=NP_417274.1;transl_table=11 NC_000913.3 RefSeq gene 2926308 2927672 . + . ID=gene2857;Dbxref=EcoGene:EG12373,GeneID:947266;Name=ygdH;gbkey=Gene;gene=ygdH;gene_biotype=protein_coding;gene_synonym=ECK2790,JW2766;locus_tag=b2795 NC_000913.3 RefSeq CDS 2926308 2927672 . + 0 ID=cds2757;Parent=gene2857;Dbxref=ASAP:ABE-0009166,UniProtKB/Swiss-Prot:P0ADR8,Genbank:NP_417275.1,EcoGene:EG12373,GeneID:947266;Name=NP_417275.1;gbkey=CDS;gene=ygdH;product=UPF0717 family protein;protein_id=NP_417275.1;transl_table=11 NC_000913.3 RefSeq gene 2928229 2929518 . + . ID=gene2858;Dbxref=EcoGene:EG12142,GeneID:947264;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;gene_synonym=dcrA,ECK2791,JW2767;locus_tag=b2796 NC_000913.3 RefSeq CDS 2928229 2929518 . + 0 ID=cds2758;Parent=gene2858;Dbxref=ASAP:ABE-0009169,UniProtKB/Swiss-Prot:P0AAD6,Genbank:NP_417276.1,EcoGene:EG12142,GeneID:947264;Name=NP_417276.1;Note=probable serine transporter;gbkey=CDS;gene=sdaC;product=putative serine transporter;protein_id=NP_417276.1;transl_table=11 NC_000913.3 RefSeq gene 2929576 2930943 . + . ID=gene2859;Dbxref=EcoGene:EG11623,GeneID:947262;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;gene_synonym=ECK2792,JW2768;locus_tag=b2797 NC_000913.3 RefSeq CDS 2929576 2930943 . + 0 ID=cds2759;Parent=gene2859;Dbxref=ASAP:ABE-0009172,UniProtKB/Swiss-Prot:P30744,Genbank:NP_417277.1,EcoGene:EG11623,GeneID:947262;Name=NP_417277.1;Note=L-serine dehydratase (deaminase)%2C L-SD2;gbkey=CDS;gene=sdaB;product=L-serine dehydratase 2;protein_id=NP_417277.1;transl_table=11 NC_000913.3 RefSeq gene 2931055 2931810 . + . ID=gene2860;Dbxref=EcoGene:EG12372,GeneID:947256;Name=ygdG;gbkey=Gene;gene=ygdG;gene_biotype=protein_coding;gene_synonym=ECK2793,exo,JW5446,xni;locus_tag=b2798 NC_000913.3 RefSeq CDS 2931055 2931810 . + 0 ID=cds2760;Parent=gene2860;Dbxref=ASAP:ABE-0009174,UniProtKB/Swiss-Prot:P38506,Genbank:NP_417278.4,EcoGene:EG12372,GeneID:947256;Name=NP_417278.4;Note=5'-3' exonuclease;gbkey=CDS;gene=ygdG;product=Ssb-binding protein%2C misidentified as ExoIX;protein_id=NP_417278.4;transl_table=11 NC_000913.3 RefSeq repeat_region 2931817 2931846 . + . ID=id347;Note=REP203 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2931865 2933013 . - . ID=gene2861;Dbxref=EcoGene:EG10351,GeneID:947273;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;gene_synonym=ECK2794,JW2770;locus_tag=b2799 NC_000913.3 RefSeq CDS 2931865 2933013 . - 0 ID=cds2761;Parent=gene2861;Dbxref=ASAP:ABE-0009177,UniProtKB/Swiss-Prot:P0A9S1,Genbank:NP_417279.2,EcoGene:EG10351,GeneID:947273;Name=NP_417279.2;gbkey=CDS;gene=fucO;product=L-1%2C2-propanediol oxidoreductase;protein_id=NP_417279.2;transl_table=11 NC_000913.3 RefSeq gene 2933041 2933688 . - . ID=gene2862;Dbxref=EcoGene:EG10348,GeneID:947282;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;gene_synonym=ECK2795,fucC,JW2771,prd;locus_tag=b2800 NC_000913.3 RefSeq CDS 2933041 2933688 . - 0 ID=cds2762;Parent=gene2862;Dbxref=ASAP:ABE-0009179,UniProtKB/Swiss-Prot:P0AB87,Genbank:NP_417280.1,EcoGene:EG10348,GeneID:947282;Name=NP_417280.1;gbkey=CDS;gene=fucA;product=L-fuculose-1-phosphate aldolase;protein_id=NP_417280.1;transl_table=11 NC_000913.3 RefSeq gene 2934235 2935551 . + . ID=gene2863;Dbxref=EcoGene:EG10352,GeneID:947487;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;gene_synonym=ECK2796,JW2772;locus_tag=b2801 NC_000913.3 RefSeq CDS 2934235 2935551 . + 0 ID=cds2763;Parent=gene2863;Dbxref=ASAP:ABE-0009187,UniProtKB/Swiss-Prot:P11551,Genbank:NP_417281.1,EcoGene:EG10352,GeneID:947487;Name=NP_417281.1;Note=fucose permease;gbkey=CDS;gene=fucP;product=L-fucose transporter;protein_id=NP_417281.1;transl_table=11 NC_000913.3 RefSeq gene 2935584 2937359 . + . ID=gene2864;Dbxref=EcoGene:EG10349,GeneID:946195;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;gene_synonym=ECK2797,JW2773;locus_tag=b2802 NC_000913.3 RefSeq CDS 2935584 2937359 . + 0 ID=cds2764;Parent=gene2864;Dbxref=ASAP:ABE-0009189,UniProtKB/Swiss-Prot:P69922,Genbank:NP_417282.1,EcoGene:EG10349,GeneID:946195;Name=NP_417282.1;gbkey=CDS;gene=fucI;product=L-fucose isomerase;protein_id=NP_417282.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2937426 2937449 . + . ID=id348;Note=REP204 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2937468 2938886 . + . ID=gene2865;Dbxref=EcoGene:EG10350,GeneID:946022;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;gene_synonym=ECK2798,JW2774;locus_tag=b2803 NC_000913.3 RefSeq CDS 2937468 2938886 . + 0 ID=cds2765;Parent=gene2865;Dbxref=ASAP:ABE-0009191,UniProtKB/Swiss-Prot:P11553,Genbank:NP_417283.2,EcoGene:EG10350,GeneID:946022;Name=NP_417283.2;gbkey=CDS;gene=fucK;product=L-fuculokinase;protein_id=NP_417283.2;transl_table=11 NC_000913.3 RefSeq gene 2938888 2939310 . + . ID=gene2866;Dbxref=EcoGene:EG10355,GeneID:945842;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;gene_synonym=ECK2799,JW2775;locus_tag=b2804 NC_000913.3 RefSeq CDS 2938888 2939310 . + 0 ID=cds2766;Parent=gene2866;Dbxref=ASAP:ABE-0009193,UniProtKB/Swiss-Prot:P0AEN8,Genbank:NP_417284.1,EcoGene:EG10355,GeneID:945842;Name=NP_417284.1;Note=protein of fucose operon;gbkey=CDS;gene=fucU;product=L-fucose mutarotase;protein_id=NP_417284.1;transl_table=11 NC_000913.3 RefSeq gene 2939368 2940099 . + . ID=gene2867;Dbxref=EcoGene:EG10353,GeneID:946905;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;gene_synonym=ECK2800,JW2776;locus_tag=b2805 NC_000913.3 RefSeq CDS 2939368 2940099 . + 0 ID=cds2767;Parent=gene2867;Dbxref=ASAP:ABE-0009195,UniProtKB/Swiss-Prot:P0ACK8,Genbank:NP_417285.1,EcoGene:EG10353,GeneID:946905;Name=NP_417285.1;Note=positive regulator of the fuc operon;gbkey=CDS;gene=fucR;product=l-fucose operon activator;protein_id=NP_417285.1;transl_table=11 NC_000913.3 RefSeq gene 2940143 2941243 . - . ID=gene2868;Dbxref=EcoGene:EG11794,GeneID:947283;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;gene_synonym=ECK2801,JW2777,ygdE;locus_tag=b2806 NC_000913.3 RefSeq CDS 2940143 2941243 . - 0 ID=cds2768;Parent=gene2868;Dbxref=ASAP:ABE-0009197,UniProtKB/Swiss-Prot:P0ADR6,Genbank:NP_417286.1,EcoGene:EG11794,GeneID:947283;Name=NP_417286.1;gbkey=CDS;gene=rlmM;product=23S rRNA C2498 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=NP_417286.1;transl_table=11 NC_000913.3 RefSeq gene 2941236 2941631 . - . ID=gene2869;Dbxref=EcoGene:EG11793,GeneID:947279;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;gene_synonym=ECK2802,JW2778;locus_tag=b2807 NC_000913.3 RefSeq CDS 2941236 2941631 . - 0 ID=cds2769;Parent=gene2869;Dbxref=ASAP:ABE-0009199,UniProtKB/Swiss-Prot:P0ADR2,Genbank:NP_417287.1,EcoGene:EG11793,GeneID:947279;Name=NP_417287.1;gbkey=CDS;gene=ygdD;product=UPF0382 family inner membrane protein;protein_id=NP_417287.1;transl_table=11 NC_000913.3 RefSeq gene 2941650 2942567 . - . ID=gene2870;Dbxref=EcoGene:EG11795,GeneID:947278;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;gene_synonym=ECK2803,JW2779;locus_tag=b2808 NC_000913.3 RefSeq CDS 2941650 2942567 . - 0 ID=cds2770;Parent=gene2870;Dbxref=ASAP:ABE-0009202,UniProtKB/Swiss-Prot:P0A9F6,Genbank:NP_417288.1,EcoGene:EG11795,GeneID:947278;Name=NP_417288.1;Note=positive regulator of gcv operon;gbkey=CDS;gene=gcvA;product=glycine cleavage system transcriptional activator%3B autorepressor;protein_id=NP_417288.1;transl_table=11 NC_000913.3 RefSeq gene 2942696 2942901 . + . ID=gene2871;Dbxref=EcoGene:EG31129,GeneID:2847720;Name=gcvB;gbkey=Gene;gene=gcvB;gene_biotype=antisense_RNA;gene_synonym=ECK2804,IS145,JWR0247,psrA11;locus_tag=b4443 NC_000913.3 RefSeq ncRNA 2942696 2942901 . + . ID=rna99;Parent=gene2871;Dbxref=ASAP:ABE-0047263,EcoGene:EG31129,GeneID:2847720;Note=regulated by gcvA and gcvR;gbkey=ncRNA;gene=gcvB;ncrna_class=antisense_RNA;product=sRNA antisense regulator represses oppA%2C dppA%2C gltI and livJ expression%2C Hfq-dependent NC_000913.3 RefSeq exon 2942696 2942901 . + . ID=id349;Parent=rna99;Dbxref=ASAP:ABE-0047263,EcoGene:EG31129,GeneID:2847720;Note=regulated by gcvA and gcvR;gbkey=ncRNA;gene=gcvB;ncrna_class=antisense_RNA;product=sRNA antisense regulator represses oppA%2C dppA%2C gltI and livJ expression%2C Hfq-dependent NC_000913.3 RefSeq gene 2942918 2943145 . - . ID=gene2872;Dbxref=EcoGene:EG13081,GeneID:947276;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;gene_synonym=ECK2805,JW5448;locus_tag=b2809 NC_000913.3 RefSeq CDS 2942918 2943145 . - 0 ID=cds2771;Parent=gene2872;Dbxref=ASAP:ABE-0009214,UniProtKB/Swiss-Prot:P65292,Genbank:NP_417289.2,EcoGene:EG13081,GeneID:947276;Name=NP_417289.2;gbkey=CDS;gene=ygdI;product=DUF903 family verified lipoprotein;protein_id=NP_417289.2;transl_table=11 NC_000913.3 RefSeq gene 2943337 2944542 . + . ID=gene2873;Dbxref=EcoGene:EG13082,GeneID:947275;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;gene_synonym=ECK2806,JW2781,ygdJ;locus_tag=b2810 NC_000913.3 RefSeq CDS 2943337 2944542 . + 0 ID=cds2772;Parent=gene2873;Dbxref=ASAP:ABE-0009218,UniProtKB/Swiss-Prot:Q46925,Genbank:NP_417290.1,EcoGene:EG13082,GeneID:947275;Name=NP_417290.1;gbkey=CDS;gene=csdA;product=cysteine sulfinate desulfinase;protein_id=NP_417290.1;transl_table=11 NC_000913.3 RefSeq gene 2944542 2944985 . + . ID=gene2874;Dbxref=EcoGene:EG13083,GeneID:947274;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;gene_synonym=ECK2807,JW2782,ygdK;locus_tag=b2811 NC_000913.3 RefSeq CDS 2944542 2944985 . + 0 ID=cds2773;Parent=gene2874;Dbxref=ASAP:ABE-0009220,UniProtKB/Swiss-Prot:P0AGF2,Genbank:NP_417291.1,EcoGene:EG13083,GeneID:947274;Name=NP_417291.1;gbkey=CDS;gene=csdE;product=CsdA-binding activator%3B Fe-S protein;protein_id=NP_417291.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2944994 2945027 . + . ID=id350;Note=REP205 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2945036 2945842 . - . ID=gene2875;Dbxref=EcoGene:EG13084,GeneID:947291;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;gene_synonym=csdL,ECK2808,JW2783,ygdL;locus_tag=b2812 NC_000913.3 RefSeq CDS 2945036 2945842 . - 0 ID=cds2774;Parent=gene2875;Dbxref=ASAP:ABE-0009223,UniProtKB/Swiss-Prot:Q46927,Genbank:NP_417292.1,EcoGene:EG13084,GeneID:947291;Name=NP_417292.1;Note=putative enzyme;gbkey=CDS;gene=tcdA;product=tRNA threonylcarbamoyladenosine dehydratase%3B sulfur acceptor for CsdA;protein_id=NP_417292.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2945896 2945992 . + . ID=id351;Note=RIP206 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 2946081 2947178 . - . ID=gene2876;Dbxref=EcoGene:EG13085,GeneID:944964;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;gene_synonym=ECK2809,JW2784,mlt,ygdM;locus_tag=b2813 NC_000913.3 RefSeq CDS 2946081 2947178 . - 0 ID=cds2775;Parent=gene2876;Dbxref=ASAP:ABE-0009228,UniProtKB/Swiss-Prot:P0A935,Genbank:NP_417293.1,EcoGene:EG13085,GeneID:944964;Name=NP_417293.1;gbkey=CDS;gene=mltA;product=membrane-bound lytic murein transglycosylase A;protein_id=NP_417293.1;transl_table=11 NC_000913.3 RefSeq gene 2947387 2947463 . + . ID=gene2877;Dbxref=EcoGene:EG30062,GeneID:947198;Name=metZ;gbkey=Gene;gene=metZ;gene_biotype=tRNA;gene_synonym=ECK2810,JWR0206,metZalpha;locus_tag=b2814 NC_000913.3 RefSeq tRNA 2947387 2947463 . + . ID=rna100;Parent=gene2877;Dbxref=ASAP:ABE-0009232,EcoGene:EG30062,GeneID:947198;Note=anticodon: CAU;gbkey=tRNA;gene=metZ;product=tRNA-Met NC_000913.3 RefSeq exon 2947387 2947463 . + . ID=id352;Parent=rna100;Dbxref=ASAP:ABE-0009232,EcoGene:EG30062,GeneID:947198;Note=anticodon: CAU;gbkey=tRNA;gene=metZ;product=tRNA-Met NC_000913.3 RefSeq gene 2947497 2947573 . + . ID=gene2878;Dbxref=EcoGene:EG31117,GeneID:947292;Name=metW;gbkey=Gene;gene=metW;gene_biotype=tRNA;gene_synonym=ECK2811,JWR0207;locus_tag=b2815 NC_000913.3 RefSeq tRNA 2947497 2947573 . + . ID=rna101;Parent=gene2878;Dbxref=ASAP:ABE-0009234,EcoGene:EG31117,GeneID:947292;Note=anticodon: CAU;gbkey=tRNA;gene=metW;product=tRNA-Met NC_000913.3 RefSeq exon 2947497 2947573 . + . ID=id353;Parent=rna101;Dbxref=ASAP:ABE-0009234,EcoGene:EG31117,GeneID:947292;Note=anticodon: CAU;gbkey=tRNA;gene=metW;product=tRNA-Met NC_000913.3 RefSeq gene 2947607 2947683 . + . ID=gene2879;Dbxref=EcoGene:EG30060,GeneID:946037;Name=metV;gbkey=Gene;gene=metV;gene_biotype=tRNA;gene_synonym=ECK2812,JWR0208,metX,metZbeta;locus_tag=b2816 NC_000913.3 RefSeq tRNA 2947607 2947683 . + . ID=rna102;Parent=gene2879;Dbxref=ASAP:ABE-0009236,EcoGene:EG30060,GeneID:946037;Note=anticodon: CAU;gbkey=tRNA;gene=metV;product=tRNA-Met NC_000913.3 RefSeq exon 2947607 2947683 . + . ID=id354;Parent=rna102;Dbxref=ASAP:ABE-0009236,EcoGene:EG30060,GeneID:946037;Note=anticodon: CAU;gbkey=tRNA;gene=metV;product=tRNA-Met NC_000913.3 RefSeq gene 2947757 2949010 . - . ID=gene2880;Dbxref=EcoGene:EG13086,GeneID:947293;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;gene_synonym=ECK2813,JW5449,ygdN;locus_tag=b2817 NC_000913.3 RefSeq CDS 2947757 2949010 . - 0 ID=cds2776;Parent=gene2880;Dbxref=ASAP:ABE-0009238,UniProtKB/Swiss-Prot:P63883,Genbank:NP_417294.4,EcoGene:EG13086,GeneID:947293;Name=NP_417294.4;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=NP_417294.4;transl_table=11 NC_000913.3 RefSeq gene 2949242 2950573 . + . ID=gene2881;Dbxref=EcoGene:EG10063,GeneID:947289;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;gene_synonym=Arg1,Arg2,argB,ECK2814,JW2786;locus_tag=b2818 NC_000913.3 RefSeq CDS 2949242 2950573 . + 0 ID=cds2777;Parent=gene2881;Dbxref=ASAP:ABE-0009245,UniProtKB/Swiss-Prot:P0A6C5,Genbank:NP_417295.1,EcoGene:EG10063,GeneID:947289;Name=NP_417295.1;Note=N-acetylglutamate synthase%3B amino acid acetyltransferase;gbkey=CDS;gene=argA;product=amino acid N-acetyltransferase and inactive acetylglutamate kinase;protein_id=NP_417295.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2950613 2950626 . + . ID=id355;Note=REP207 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2950635 2952461 . - . ID=gene2882;Dbxref=EcoGene:EG10826,GeneID:947287;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;gene_synonym=ECK2815,hopE,JW2787;locus_tag=b2819 NC_000913.3 RefSeq CDS 2950635 2952461 . - 0 ID=cds2778;Parent=gene2882;Dbxref=ASAP:ABE-0009247,UniProtKB/Swiss-Prot:P04993,Genbank:NP_417296.1,EcoGene:EG10826,GeneID:947287;Name=NP_417296.1;Note=DNA helicase%2C ATP-dependent dsDNA/ssDNA exonuclease V subunit%2C ssDNA endonuclease;gbkey=CDS;gene=recD;product=exonuclease V (RecBCD complex)%2C alpha chain;protein_id=NP_417296.1;transl_table=11 NC_000913.3 RefSeq gene 2952461 2956003 . - . ID=gene2883;Dbxref=EcoGene:EG10824,GeneID:947286;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;gene_synonym=ECK2816,ior,JW2788,rorA;locus_tag=b2820 NC_000913.3 RefSeq CDS 2952461 2956003 . - 0 ID=cds2779;Parent=gene2883;Dbxref=ASAP:ABE-0009249,UniProtKB/Swiss-Prot:P08394,Genbank:NP_417297.1,EcoGene:EG10824,GeneID:947286;Name=NP_417297.1;Note=DNA helicase%2C ATP-dependent dsDNA/ssDNA exonuclease V subunit%2C ssDNA endonuclease;gbkey=CDS;gene=recB;product=exonuclease V (RecBCD complex)%2C beta subunit;protein_id=NP_417297.1;transl_table=11 NC_000913.3 RefSeq gene 2955996 2958884 . - . ID=gene2884;Dbxref=EcoGene:EG10786,GeneID:947284;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;gene_synonym=ECK2817,JW2789,ptr;locus_tag=b2821 NC_000913.3 RefSeq CDS 2955996 2958884 . - 0 ID=cds2780;Parent=gene2884;Dbxref=ASAP:ABE-0009252,UniProtKB/Swiss-Prot:P05458,Genbank:NP_417298.1,EcoGene:EG10786,GeneID:947284;Name=NP_417298.1;gbkey=CDS;gene=ptrA;product=protease III;protein_id=NP_417298.1;transl_table=11 NC_000913.3 RefSeq gene 2959060 2962428 . - . ID=gene2885;Dbxref=EcoGene:EG10825,GeneID:947294;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;gene_synonym=ECK2818,JW2790;locus_tag=b2822 NC_000913.3 RefSeq CDS 2959060 2962428 . - 0 ID=cds2781;Parent=gene2885;Dbxref=ASAP:ABE-0009255,UniProtKB/Swiss-Prot:P07648,Genbank:NP_417299.1,EcoGene:EG10825,GeneID:947294;Name=NP_417299.1;Note=DNA helicase%2C ATP-dependent dsDNA/ssDNA exonuclease V subunit%2C ssDNA endonuclease;gbkey=CDS;gene=recC;product=exonuclease V (RecBCD complex)%2C gamma chain;protein_id=NP_417299.1;transl_table=11 NC_000913.3 RefSeq gene 2962441 2962764 . - . ID=gene2886;Dbxref=EcoGene:EG11154,GeneID:945797;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;gene_synonym=ECK2819,JW2791,ygdA;locus_tag=b2823 NC_000913.3 RefSeq CDS 2962441 2962764 . - 0 ID=cds2782;Parent=gene2886;Dbxref=ASAP:ABE-0009257,UniProtKB/Swiss-Prot:P08372,Genbank:NP_417300.1,EcoGene:EG11154,GeneID:945797;Name=NP_417300.1;Note=prepilin peptidase dependent protein C;gbkey=CDS;gene=ppdC;product=putative prepilin peptidase-dependent protein;protein_id=NP_417300.1;transl_table=11 NC_000913.3 RefSeq gene 2962749 2963156 . - . ID=gene2887;Dbxref=EcoGene:EG11155,GeneID:944763;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;gene_synonym=ECK2820,JW5450;locus_tag=b2824 NC_000913.3 RefSeq CDS 2962749 2963156 . - 0 ID=cds2783;Parent=gene2887;Dbxref=ASAP:ABE-0009261,UniProtKB/Swiss-Prot:P08370,Genbank:NP_417301.4,EcoGene:EG11155,GeneID:944763;Name=NP_417301.4;gbkey=CDS;gene=ygdB;product=DUF2509 family protein;protein_id=NP_417301.4;transl_table=11 NC_000913.3 RefSeq gene 2963153 2963716 . - . ID=gene2888;Dbxref=EcoGene:EG11156,GeneID:948985;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;gene_synonym=ECK2821,JW5451,ygdC;locus_tag=b2825 NC_000913.3 RefSeq CDS 2963153 2963716 . - 0 ID=cds2784;Parent=gene2888;Dbxref=ASAP:ABE-0009263,UniProtKB/Swiss-Prot:P08371,Genbank:NP_417302.1,EcoGene:EG11156,GeneID:948985;Name=NP_417302.1;Note=prepilin peptidase dependent protein B;gbkey=CDS;gene=ppdB;product=putative prepilin peptidase-dependent protein;protein_id=NP_417302.1;transl_table=11 NC_000913.3 RefSeq gene 2963707 2964177 . - . ID=gene2889;Dbxref=EcoGene:EG12081,GeneID:945393;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;gene_synonym=ECK2822,JW2794;locus_tag=b2826 NC_000913.3 RefSeq CDS 2963707 2964177 . - 0 ID=cds2785;Parent=gene2889;Dbxref=ASAP:ABE-0009266,UniProtKB/Swiss-Prot:P33554,Genbank:NP_417303.1,EcoGene:EG12081,GeneID:945393;Name=NP_417303.1;Note=prepilin peptidase dependent protein A;gbkey=CDS;gene=ppdA;product=putative prepilin peptidase-dependent protein;protein_id=NP_417303.1;transl_table=11 NC_000913.3 RefSeq gene 2964361 2965155 . - . ID=gene2890;Dbxref=EcoGene:EG11002,GeneID:949035;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;gene_synonym=ECK2823,JW2795;locus_tag=b2827 NC_000913.3 RefSeq CDS 2964361 2965155 . - 0 ID=cds2786;Parent=gene2890;Dbxref=ASAP:ABE-0009268,UniProtKB/Swiss-Prot:P0A884,Genbank:NP_417304.1,EcoGene:EG11002,GeneID:949035;Name=NP_417304.1;gbkey=CDS;gene=thyA;product=thymidylate synthetase;protein_id=NP_417304.1;transl_table=11 NC_000913.3 RefSeq gene 2965162 2966037 . - . ID=gene2891;Dbxref=EcoGene:EG12128,GeneID:947303;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;gene_synonym=ECK2824,JW2796,umpA;locus_tag=b2828 NC_000913.3 RefSeq CDS 2965162 2966037 . - 0 ID=cds2787;Parent=gene2891;Dbxref=ASAP:ABE-0009270,UniProtKB/Swiss-Prot:P60955,Genbank:NP_417305.1,EcoGene:EG12128,GeneID:947303;Name=NP_417305.1;Note=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase%3B a major membrane phospholipid;gbkey=CDS;gene=lgt;product=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase;protein_id=NP_417305.1;transl_table=11 NC_000913.3 RefSeq gene 2966188 2968434 . - . ID=gene2892;Dbxref=EcoGene:EG12188,GeneID:947301;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;gene_synonym=ECK2825,JW2797,ygdF,ygdO;locus_tag=b2829 NC_000913.3 RefSeq CDS 2966188 2968434 . - 0 ID=cds2788;Parent=gene2892;Dbxref=ASAP:ABE-0009274,UniProtKB/Swiss-Prot:P37177,Genbank:NP_417306.1,EcoGene:EG12188,GeneID:947301;Name=NP_417306.1;Note=PTS system%2C enzyme I%2C transcriptional regulator (with NPR and NTR proteins);gbkey=CDS;gene=ptsP;product=PEP-protein phosphotransferase enzyme I%3B GAF domain containing protein;protein_id=NP_417306.1;transl_table=11 NC_000913.3 RefSeq gene 2968447 2968977 . - . ID=gene2893;Dbxref=EcoGene:EG13091,GeneID:947300;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;gene_synonym=ECK2826,JW2798,nudH,ygdP;locus_tag=b2830 NC_000913.3 RefSeq CDS 2968447 2968977 . - 0 ID=cds2789;Parent=gene2893;Dbxref=ASAP:ABE-0009276,UniProtKB/Swiss-Prot:P0A776,Genbank:NP_417307.1,EcoGene:EG13091,GeneID:947300;Name=NP_417307.1;Note=putative invasion protein;gbkey=CDS;gene=rppH;product=RNA pyrophosphohydrolase;protein_id=NP_417307.1;transl_table=11 NC_000913.3 RefSeq gene 2969662 2970351 . + . ID=gene2894;Dbxref=EcoGene:EG10624,GeneID:947299;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;gene_synonym=ECK2827,JW2799,mutR,prv;locus_tag=b2831 NC_000913.3 RefSeq CDS 2969662 2970351 . + 0 ID=cds2790;Parent=gene2894;Dbxref=ASAP:ABE-0009287,UniProtKB/Swiss-Prot:P06722,Genbank:NP_417308.1,EcoGene:EG10624,GeneID:947299;Name=NP_417308.1;Note=methyl-directed mismatch repair;gbkey=CDS;gene=mutH;product=methyl-directed mismatch repair protein;protein_id=NP_417308.1;transl_table=11 NC_000913.3 RefSeq gene 2970420 2971133 . + . ID=gene2895;Dbxref=EcoGene:EG13092,GeneID:947295;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;gene_synonym=ECK2828,JW2800;locus_tag=b2832 NC_000913.3 RefSeq CDS 2970420 2971133 . + 0 ID=cds2791;Parent=gene2895;Dbxref=ASAP:ABE-0009290,UniProtKB/Swiss-Prot:P67127,Genbank:NP_417309.1,EcoGene:EG13092,GeneID:947295;Name=NP_417309.1;Note=putative transport protein;gbkey=CDS;gene=ygdQ;product=UPF0053 family inner membrane protein;protein_id=NP_417309.1;transl_table=11 NC_000913.3 RefSeq gene 2971271 2971489 . + . ID=gene2896;Dbxref=EcoGene:EG13076,GeneID:947304;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;gene_synonym=ECK2829,JW2801;locus_tag=b2833 NC_000913.3 RefSeq CDS 2971271 2971489 . + 0 ID=cds2792;Parent=gene2896;Dbxref=ASAP:ABE-0009293,UniProtKB/Swiss-Prot:P65294,Genbank:NP_417310.1,EcoGene:EG13076,GeneID:947304;Name=NP_417310.1;gbkey=CDS;gene=ygdR;product=DUF903 family verified lipoprotein;protein_id=NP_417310.1;transl_table=11 NC_000913.3 RefSeq gene 2971597 2972637 . + . ID=gene2897;Dbxref=EcoGene:EG13093,GeneID:947306;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;gene_synonym=ECK2830,JW2802,ygdS;locus_tag=b2834 NC_000913.3 RefSeq CDS 2971597 2972637 . + 0 ID=cds2793;Parent=gene2897;Dbxref=ASAP:ABE-0009298,UniProtKB/Swiss-Prot:P0A9T4,Genbank:NP_417311.1,EcoGene:EG13093,GeneID:947306;Name=NP_417311.1;gbkey=CDS;gene=tas;product=putative NADP(H)-dependent aldo-keto reductase;protein_id=NP_417311.1;transl_table=11 NC_000913.3 RefSeq gene 2972669 2973862 . - . ID=gene2898;Dbxref=EcoGene:EG12455,GeneID:947317;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;gene_synonym=ECK2831,JW2803,ygeD;locus_tag=b2835 NC_000913.3 RefSeq CDS 2972669 2973862 . - 0 ID=cds2794;Parent=gene2898;Dbxref=ASAP:ABE-0009300,UniProtKB/Swiss-Prot:P39196,Genbank:NP_417312.1,EcoGene:EG12455,GeneID:947317;Name=NP_417312.1;Note=putative resistance proteins;gbkey=CDS;gene=lplT;product=lysophospholipid transporter;protein_id=NP_417312.1;transl_table=11 NC_000913.3 RefSeq gene 2973855 2976014 . - . ID=gene2899;Dbxref=EcoGene:EG11679,GeneID:947315;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;gene_synonym=ECK2832,JW2804;locus_tag=b2836 NC_000913.3 RefSeq CDS 2973855 2976014 . - 0 ID=cds2795;Parent=gene2899;Dbxref=ASAP:ABE-0009302,UniProtKB/Swiss-Prot:P31119,Genbank:NP_417313.1,EcoGene:EG11679,GeneID:947315;Name=NP_417313.1;Note=2-acyl-glycerophospho-ethanolamine acyltransferase%3B acyl-acyl-carrier protein synthetase;gbkey=CDS;gene=aas;product=fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase;protein_id=NP_417313.1;transl_table=11 NC_000913.3 RefSeq gene 2976102 2976189 . - . ID=gene2900;Dbxref=EcoGene:EG31157,GeneID:2847746;Name=omrA;gbkey=Gene;gene=omrA;gene_biotype=antisense_RNA;gene_synonym=ECK2833,JWR0248,PAIR2a,psrA12,rygA,sraE,t59;locus_tag=b4444 NC_000913.3 RefSeq ncRNA 2976102 2976189 . - . ID=rna103;Parent=gene2900;Dbxref=ASAP:ABE-0047264,EcoGene:EG31157,GeneID:2847746;Note=identified in a large scale screen;gbkey=ncRNA;gene=omrA;ncrna_class=antisense_RNA;product=sRNA antisense regulator downregulates OM proteins and curli%3B positively regulated by OmpR/EnvZ%2C Hfq-dependent NC_000913.3 RefSeq exon 2976102 2976189 . - . ID=id356;Parent=rna103;Dbxref=ASAP:ABE-0047264,EcoGene:EG31157,GeneID:2847746;Note=identified in a large scale screen;gbkey=ncRNA;gene=omrA;ncrna_class=antisense_RNA;product=sRNA antisense regulator downregulates OM proteins and curli%3B positively regulated by OmpR/EnvZ%2C Hfq-dependent NC_000913.3 RefSeq gene 2976304 2976385 . - . ID=gene2901;Dbxref=EcoGene:EG31158,GeneID:2847747;Name=omrB;gbkey=Gene;gene=omrB;gene_biotype=antisense_RNA;gene_synonym=ECK2834,JWR0249,PAIR2b,rygB,t59;locus_tag=b4445 NC_000913.3 RefSeq ncRNA 2976304 2976385 . - . ID=rna104;Parent=gene2901;Dbxref=ASAP:ABE-0047265,EcoGene:EG31158,GeneID:2847747;Note=identified in a large scale screen;gbkey=ncRNA;gene=omrB;ncrna_class=antisense_RNA;product=sRNA antisense regulator downregulates OM proteins and curli%3B positively regulated by OmpR/EnvZ%2C Hfq-dependent NC_000913.3 RefSeq exon 2976304 2976385 . - . ID=id357;Parent=rna104;Dbxref=ASAP:ABE-0047265,EcoGene:EG31158,GeneID:2847747;Note=identified in a large scale screen;gbkey=ncRNA;gene=omrB;ncrna_class=antisense_RNA;product=sRNA antisense regulator downregulates OM proteins and curli%3B positively regulated by OmpR/EnvZ%2C Hfq-dependent NC_000913.3 RefSeq gene 2976599 2977630 . + . ID=gene2902;Dbxref=EcoGene:EG10364,GeneID:947314;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;gene_synonym=ECK2835,JW2805;locus_tag=b2837 NC_000913.3 RefSeq CDS 2976599 2977630 . + 0 ID=cds2796;Parent=gene2902;Dbxref=ASAP:ABE-0009307,UniProtKB/Swiss-Prot:P03024,Genbank:NP_417314.1,EcoGene:EG10364,GeneID:947314;Name=NP_417314.1;Note=repressor of galETK operon;gbkey=CDS;gene=galR;product=galactose-inducible d-galactose regulon transcriptional repressor%3B autorepressor;protein_id=NP_417314.1;transl_table=11 NC_000913.3 RefSeq gene 2977637 2978899 . - . ID=gene2903;Dbxref=EcoGene:EG10549,GeneID:947313;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;gene_synonym=ECK2836,JW2806;locus_tag=b2838 NC_000913.3 RefSeq CDS 2977637 2978899 . - 0 ID=cds2797;Parent=gene2903;Dbxref=ASAP:ABE-0009309,UniProtKB/Swiss-Prot:P00861,Genbank:NP_417315.1,EcoGene:EG10549,GeneID:947313;Name=NP_417315.1;Note=diaminopimelate decarboxylase;gbkey=CDS;gene=lysA;product=diaminopimelate decarboxylase%2C PLP-binding;protein_id=NP_417315.1;transl_table=11 NC_000913.3 RefSeq gene 2979021 2979956 . + . ID=gene2904;Dbxref=EcoGene:EG10551,GeneID:947311;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;gene_synonym=ECK2837,JW2807;locus_tag=b2839 NC_000913.3 RefSeq CDS 2979021 2979956 . + 0 ID=cds2798;Parent=gene2904;Dbxref=ASAP:ABE-0009313,UniProtKB/Swiss-Prot:P03030,Genbank:NP_417316.1,EcoGene:EG10551,GeneID:947311;Name=NP_417316.1;Note=positive regulator for lys;gbkey=CDS;gene=lysR;product=transcriptional activator of lysA%3B autorepressor;protein_id=NP_417316.1;transl_table=11 NC_000913.3 RefSeq gene 2979943 2980635 . - . ID=gene2905;Dbxref=EcoGene:EG11157,GeneID:947348;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;gene_synonym=ECK2838,JW2808;locus_tag=b2840 NC_000913.3 RefSeq CDS 2979943 2980635 . - 0 ID=cds2799;Parent=gene2905;Dbxref=ASAP:ABE-0009315,UniProtKB/Swiss-Prot:P03813,Genbank:NP_417317.1,EcoGene:EG11157,GeneID:947348;Name=NP_417317.1;Note=putative resistance proteins;gbkey=CDS;gene=ygeA;product=Asp/Glu_racemase family protein;protein_id=NP_417317.1;transl_table=11 NC_000913.3 RefSeq repeat_region 2980733 2980755 . + . ID=id358;Note=REP208 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 2980764 2982182 . - . ID=gene2906;Dbxref=EcoGene:EG10056,GeneID:947341;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;gene_synonym=ECK2839,JW2809;locus_tag=b2841 NC_000913.3 RefSeq CDS 2980764 2982182 . - 0 ID=cds2800;Parent=gene2906;Dbxref=ASAP:ABE-0009319,UniProtKB/Swiss-Prot:P0AE24,Genbank:NP_417318.1,EcoGene:EG10056,GeneID:947341;Name=NP_417318.1;Note=low-affinity L-arabinose transport system proton symport protein;gbkey=CDS;gene=araE;product=arabinose transporter;protein_id=NP_417318.1;transl_table=11 NC_000913.3 RefSeq gene 2982497 2983258 . - . ID=gene2907;Dbxref=EcoGene:EG12361,GeneID:947323;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;gene_synonym=ECK2840,JW2810,ygeC,yqeD;locus_tag=b2842 NC_000913.3 RefSeq CDS 2982497 2983258 . - 0 ID=cds2801;Parent=gene2907;Dbxref=ASAP:ABE-0009330,UniProtKB/Swiss-Prot:P37769,Genbank:NP_417319.1,EcoGene:EG12361,GeneID:947323;Name=NP_417319.1;gbkey=CDS;gene=kduD;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase%3B KDG oxidoreductase%3B 20-ketosteroid reductase;protein_id=NP_417319.1;transl_table=11 NC_000913.3 RefSeq gene 2983288 2984124 . - . ID=gene2908;Dbxref=EcoGene:EG13096,GeneID:947319;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;gene_synonym=ECK2841,JW2811,yqeE;locus_tag=b2843 NC_000913.3 RefSeq CDS 2983288 2984124 . - 0 ID=cds2802;Parent=gene2908;Dbxref=ASAP:ABE-0009332,UniProtKB/Swiss-Prot:Q46938,Genbank:NP_417320.1,EcoGene:EG13096,GeneID:947319;Name=NP_417320.1;Note=homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase;gbkey=CDS;gene=kduI;product=hexuronate isomerase;protein_id=NP_417320.1;transl_table=11 NC_000913.3 RefSeq gene 2984411 2985592 . - . ID=gene2909;Dbxref=EcoGene:EG13097,GeneID:947324;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;gene_synonym=ECK2842,JW5453;locus_tag=b2844 NC_000913.3 RefSeq CDS 2984411 2985592 . - 0 ID=cds2803;Parent=gene2909;Dbxref=ASAP:ABE-0009335,UniProtKB/Swiss-Prot:Q46939,Genbank:NP_417321.2,EcoGene:EG13097,GeneID:947324;Name=NP_417321.2;Note=putative acyltransferase;gbkey=CDS;gene=yqeF;product=short chain acyltransferase;protein_id=NP_417321.2;transl_table=11 NC_000913.3 RefSeq gene 2985847 2987076 . + . ID=gene2910;Dbxref=EcoGene:EG13098,GeneID:945028;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;gene_synonym=ECK2843,JW2813;locus_tag=b2845 NC_000913.3 RefSeq CDS 2985847 2987076 . + 0 ID=cds2804;Parent=gene2910;Dbxref=ASAP:ABE-0009345,UniProtKB/Swiss-Prot:P63340,Genbank:NP_417322.1,EcoGene:EG13098,GeneID:945028;Name=NP_417322.1;Note=putative transporter protein;gbkey=CDS;gene=yqeG;product=putative transporter;protein_id=NP_417322.1;transl_table=11 NC_000913.3 RefSeq gene 2987536 2988168 . + . ID=gene2911;Dbxref=EcoGene:EG13099,GeneID:945263;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;gene_synonym=ECK2844,JW5454;locus_tag=b2846 NC_000913.3 RefSeq CDS 2987536 2988168 . + 0 ID=cds2805;Parent=gene2911;Dbxref=ASAP:ABE-0009349,UniProtKB/Swiss-Prot:Q46941,Genbank:NP_417323.2,EcoGene:EG13099,GeneID:945263;Name=NP_417323.2;gbkey=CDS;gene=yqeH;product=putative LuxR family transcriptional regulator;protein_id=NP_417323.2;transl_table=11 NC_000913.3 RefSeq gene 2988502 2989311 . + . ID=gene2912;Dbxref=EcoGene:EG13100,GeneID:947327;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;gene_synonym=ECK2845,JW2815;locus_tag=b2847 NC_000913.3 RefSeq CDS 2988502 2989311 . + 0 ID=cds2806;Parent=gene2912;Dbxref=ASAP:ABE-0009352,UniProtKB/Swiss-Prot:Q46942,Genbank:NP_417324.1,EcoGene:EG13100,GeneID:947327;Name=NP_417324.1;Note=putative sensory transducer;gbkey=CDS;gene=yqeI;product=putative transcriptional regulator;protein_id=NP_417324.1;transl_table=11 NC_000913.3 RefSeq gene 2989304 2989786 . + . ID=gene2913;Dbxref=EcoGene:EG13101,GeneID:947328;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=protein_coding;gene_synonym=ECK2846,JW5455;locus_tag=b2848 NC_000913.3 RefSeq CDS 2989304 2989786 . + 0 ID=cds2807;Parent=gene2913;Dbxref=ASAP:ABE-0009354,UniProtKB/Swiss-Prot:Q46943,Genbank:NP_417325.4,EcoGene:EG13101,GeneID:947328;Name=NP_417325.4;gbkey=CDS;gene=yqeJ;product=uncharacterized protein;protein_id=NP_417325.4;transl_table=11 NC_000913.3 RefSeq gene 2989819 2989899 . - . ID=gene2914;Dbxref=EcoGene:EG14488,GeneID:7751637;Name=yqeL;gbkey=Gene;gene=yqeL;gene_biotype=protein_coding;gene_synonym=ECK4498;locus_tag=b4683 NC_000913.3 RefSeq CDS 2989819 2989899 . - 0 ID=cds2808;Parent=gene2914;Dbxref=UniProtKB/Swiss-Prot:C1P613,Genbank:YP_002791253.1,EcoGene:EG14488,GeneID:7751637;Name=YP_002791253.1;gbkey=CDS;gene=yqeL;product=uncharacterized protein;protein_id=YP_002791253.1;transl_table=11 NC_000913.3 RefSeq gene 2989935 2990360 . - . ID=gene2915;Dbxref=EcoGene:EG13274,GeneID:947329;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;gene_synonym=ECK2847,JW2817;locus_tag=b2849 NC_000913.3 RefSeq CDS 2989935 2990360 . - 0 ID=cds2809;Parent=gene2915;Dbxref=ASAP:ABE-0009356,UniProtKB/Swiss-Prot:P77136,Genbank:NP_417326.2,EcoGene:EG13274,GeneID:947329;Name=NP_417326.2;gbkey=CDS;gene=yqeK;product=uncharacterized protein;protein_id=NP_417326.2;transl_table=11 NC_000913.3 RefSeq gene 2990554 2991043 . + . ID=gene2916;Dbxref=EcoGene:EG13036,GeneID:946823;Name=ygeF;gbkey=Gene;gene=ygeF;gene_biotype=pseudogene;gene_synonym=ECK2848,JW2818;locus_tag=b2850;pseudo=true NC_000913.3 RefSeq CDS 2990554 2990949 . + 0 ID=cds2810;Parent=gene2916;Dbxref=ASAP:ABE-0009361,UniProtKB/Swiss-Prot:Q46786,EcoGene:EG13036,GeneID:946823;Note=pseudogene;gbkey=CDS;gene=ygeF;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2990948 2991043 . + 0 ID=cds2810;Parent=gene2916;Dbxref=ASAP:ABE-0009361,UniProtKB/Swiss-Prot:Q46786,EcoGene:EG13036,GeneID:946823;Note=pseudogene;gbkey=CDS;gene=ygeF;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2991268 2991759 . + . ID=gene2917;Dbxref=EcoGene:EG13037,GeneID:946986;Name=ygeG;gbkey=Gene;gene=ygeG;gene_biotype=protein_coding;gene_synonym=ECK2849,JW2819;locus_tag=b2851 NC_000913.3 RefSeq CDS 2991268 2991759 . + 0 ID=cds2811;Parent=gene2917;Dbxref=ASAP:ABE-0009364,UniProtKB/Swiss-Prot:Q46787,Genbank:NP_417328.1,EcoGene:EG13037,GeneID:946986;Name=NP_417328.1;gbkey=CDS;gene=ygeG;product=SycD-like chaperone family TPR-repeat-containing protein;protein_id=NP_417328.1;transl_table=11 NC_000913.3 RefSeq gene 2992094 2993470 . + . ID=gene2918;Dbxref=EcoGene:EG13038,GeneID:946265;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;gene_synonym=ECK2850,JW2820;locus_tag=b2852 NC_000913.3 RefSeq CDS 2992094 2993470 . + 0 ID=cds2812;Parent=gene2918;Dbxref=ASAP:ABE-0009368,UniProtKB/Swiss-Prot:P76639,Genbank:NP_417329.1,EcoGene:EG13038,GeneID:946265;Name=NP_417329.1;Note=putative invasion protein;gbkey=CDS;gene=ygeH;product=putative transcriptional regulator;protein_id=NP_417329.1;transl_table=11 NC_000913.3 RefSeq gene 2993638 2993856 . + . ID=gene2919;Dbxref=EcoGene:EG13039,GeneID:947336;Name=ygeI;gbkey=Gene;gene=ygeI;gene_biotype=protein_coding;gene_synonym=ECK2851,JW5456;locus_tag=b2853 NC_000913.3 RefSeq CDS 2993638 2993856 . + 0 ID=cds2813;Parent=gene2919;Dbxref=ASAP:ABE-0009374,UniProtKB/Swiss-Prot:Q46789,Genbank:NP_417330.1,EcoGene:EG13039,GeneID:947336;Name=NP_417330.1;gbkey=CDS;gene=ygeI;product=uncharacterized protein;protein_id=NP_417330.1;transl_table=11 NC_000913.3 RefSeq gene 2993939 2994441 . + . ID=gene2920;Dbxref=EcoGene:EG13040,GeneID:947338;Name=pbl;gbkey=Gene;gene=pbl;gene_biotype=pseudogene;gene_synonym=ECK2852,JW5457,ygeJ;locus_tag=b2854;pseudo=true NC_000913.3 RefSeq CDS 2993939 2994382 . + 0 ID=cds2814;Parent=gene2920;Dbxref=ASAP:ABE-0009377,UniProtKB/Swiss-Prot:Q46790,EcoGene:EG13040,GeneID:947338;Note=pseudogene%2C peptidoglycan-binding enzyme family;gbkey=CDS;gene=pbl;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2994382 2994441 . + 0 ID=cds2814;Parent=gene2920;Dbxref=ASAP:ABE-0009377,UniProtKB/Swiss-Prot:Q46790,EcoGene:EG13040,GeneID:947338;Note=pseudogene%2C peptidoglycan-binding enzyme family;gbkey=CDS;gene=pbl;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2994460 2995092 . - . ID=gene2921;Dbxref=EcoGene:EG13041,GeneID:947332;Name=ygeK;gbkey=Gene;gene=ygeK;gene_biotype=pseudogene;gene_synonym=ECK2853,JW5458,ygeL;locus_tag=b2856;pseudo=true NC_000913.3 RefSeq CDS 2994460 2995092 . - 0 ID=cds2815;Parent=gene2921;Dbxref=ASAP:ABE-0009379,ASAP:ABE-0009381,UniProtKB/Swiss-Prot:Q46791,EcoGene:EG13041,GeneID:947332;Note=pseudogene%2C response regulator family%2C part of T3SS PAI ETT2 remnant~putative 2-component transcriptional regulator;gbkey=CDS;gene=ygeK;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2995314 2996020 . - . ID=gene2922;Dbxref=EcoGene:EG13044,GeneID:2847705;Name=ygeN;gbkey=Gene;gene=ygeN;gene_biotype=pseudogene;gene_synonym=ECK2855,JW5459,ygeM;locus_tag=b2858;pseudo=true NC_000913.3 RefSeq CDS 2995760 2996020 . - 0 ID=cds2816;Parent=gene2922;Dbxref=ASAP:ABE-0009385,ASAP:ABE-0009387,UniProtKB/Swiss-Prot:Q46793,EcoGene:EG13044,GeneID:2847705;Note=pseudogene%2C orgB family%2C part of T3SS PAI ETT2 remnant;gbkey=CDS;gene=ygeN;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 2995314 2995760 . - 0 ID=cds2816;Parent=gene2922;Dbxref=ASAP:ABE-0009385,ASAP:ABE-0009387,UniProtKB/Swiss-Prot:Q46793,EcoGene:EG13044,GeneID:2847705;Note=pseudogene%2C orgB family%2C part of T3SS PAI ETT2 remnant;gbkey=CDS;gene=ygeN;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2995962 2996360 . - . ID=gene2923;Dbxref=EcoGene:EG13045,GeneID:947325;Name=ygeO;gbkey=Gene;gene=ygeO;gene_biotype=pseudogene;gene_synonym=ECK2857,JW5846;locus_tag=b2859;pseudo=true NC_000913.3 RefSeq CDS 2995962 2996360 . - 0 ID=cds2817;Parent=gene2923;Dbxref=ASAP:ABE-0009390,UniProtKB/Swiss-Prot:Q46795,EcoGene:EG13045,GeneID:947325;Note=pseudogene%2C orgA family%2C part of T3SS PAI ETT2 remnant;gbkey=CDS;gene=ygeO;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 2996361 2997691 . - . ID=id359;gbkey=mobile_element NC_000913.3 RefSeq gene 2996372 2997277 . - . ID=gene2924;Dbxref=EcoGene:EG40004,GeneID:947346;Name=insD1;gbkey=Gene;gene=insD1;gene_biotype=protein_coding;gene_synonym=ECK0358;locus_tag=b2860 NC_000913.3 RefSeq CDS 2996372 2997277 . - 0 ID=cds2818;Parent=gene2924;Dbxref=ASAP:ABE-0009395,UniProtKB/Swiss-Prot:P0CF56,Genbank:NP_417337.1,EcoGene:EG40004,GeneID:947346;Name=NP_417337.1;gbkey=CDS;gene=insD1;product=IS2 transposase TnpB;protein_id=NP_417337.1;transl_table=11 NC_000913.3 RefSeq gene 2997235 2997600 . - . ID=gene2925;Dbxref=EcoGene:EG40003,GeneID:947347;Name=insC1;gbkey=Gene;gene=insC1;gene_biotype=protein_coding;gene_synonym=ECK0357;locus_tag=b2861 NC_000913.3 RefSeq CDS 2997235 2997600 . - 0 ID=cds2819;Parent=gene2925;Dbxref=ASAP:ABE-0009397,UniProtKB/Swiss-Prot:P0CF43,Genbank:NP_417338.3,EcoGene:EG40003,GeneID:947347;Name=NP_417338.3;gbkey=CDS;gene=insC1;product=IS2 repressor TnpA;protein_id=NP_417338.3;transl_table=11 NC_000913.3 RefSeq gene 2997692 2998828 . - . ID=gene2926;Dbxref=EcoGene:EG13047,GeneID:947344;Name=ygeQ;gbkey=Gene;gene=ygeQ;gene_biotype=pseudogene;gene_synonym=ECK2858,JW2831,ygeP;locus_tag=b2863;pseudo=true NC_000913.3 RefSeq CDS 2997692 2998828 . - 0 ID=cds2820;Parent=gene2926;Dbxref=ASAP:ABE-0009399,ASAP:ABE-0009401,UniProtKB/Swiss-Prot:Q46797,EcoGene:EG13047,GeneID:947344;Note=pseudogene%2C glycosyl hydrolase family 15%2C part of T3SS PAI ETT2 remnant;gbkey=CDS;gene=ygeQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 2998984 2999057 . - . ID=gene2927;Dbxref=EcoGene:EG30037,GeneID:947343;Name=glyU;gbkey=Gene;gene=glyU;gene_biotype=tRNA;gene_synonym=ECK2860,JWR0066,suA36,sufD,sumB,supT;locus_tag=b2864 NC_000913.3 RefSeq tRNA 2998984 2999057 . - . ID=rna105;Parent=gene2927;Dbxref=ASAP:ABE-0009405,EcoGene:EG30037,GeneID:947343;Note=anticodon: CCC;gbkey=tRNA;gene=glyU;product=tRNA-Gly NC_000913.3 RefSeq exon 2998984 2999057 . - . ID=id360;Parent=rna105;Dbxref=ASAP:ABE-0009405,EcoGene:EG30037,GeneID:947343;Note=anticodon: CCC;gbkey=tRNA;gene=glyU;product=tRNA-Gly NC_000913.3 RefSeq gene 2999136 2999891 . - . ID=gene2928;Dbxref=EcoGene:EG13048,GeneID:947352;Name=ygeR;gbkey=Gene;gene=ygeR;gene_biotype=protein_coding;gene_synonym=ECK2861,JW2833;locus_tag=b2865 NC_000913.3 RefSeq CDS 2999136 2999891 . - 0 ID=cds2821;Parent=gene2928;Dbxref=ASAP:ABE-0009407,UniProtKB/Swiss-Prot:Q46798,Genbank:NP_417341.4,EcoGene:EG13048,GeneID:947352;Name=NP_417341.4;Note=putative lipoprotein;gbkey=CDS;gene=ygeR;product=LysM domain-containing M23 family putative peptidase%3B septation lipoprotein;protein_id=NP_417341.4;transl_table=11 NC_000913.3 RefSeq gene 3000345 3002603 . + . ID=gene2929;Dbxref=EcoGene:EG13049,GeneID:947116;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;gene_synonym=ECK2862,JW5462,ygeS;locus_tag=b2866 NC_000913.3 RefSeq CDS 3000345 3002603 . + 0 ID=cds2822;Parent=gene2929;Dbxref=ASAP:ABE-0009413,UniProtKB/Swiss-Prot:Q46799,Genbank:NP_417342.1,EcoGene:EG13049,GeneID:947116;Name=NP_417342.1;gbkey=CDS;gene=xdhA;product=xanthine dehydrogenase%2C molybdenum binding subunit;protein_id=NP_417342.1;transl_table=11 NC_000913.3 RefSeq gene 3002614 3003492 . + . ID=gene2930;Dbxref=EcoGene:EG13050,GeneID:947205;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;gene_synonym=ECK2863,JW2835,ygeT;locus_tag=b2867 NC_000913.3 RefSeq CDS 3002614 3003492 . + 0 ID=cds2823;Parent=gene2930;Dbxref=ASAP:ABE-0009416,UniProtKB/Swiss-Prot:Q46800,Genbank:NP_417343.1,EcoGene:EG13050,GeneID:947205;Name=NP_417343.1;gbkey=CDS;gene=xdhB;product=xanthine dehydrogenase%2C FAD-binding subunit;protein_id=NP_417343.1;transl_table=11 NC_000913.3 RefSeq gene 3003489 3003968 . + . ID=gene2931;Dbxref=EcoGene:EG13051,GeneID:945148;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;gene_synonym=ECK2864,JW2836,ygeU;locus_tag=b2868 NC_000913.3 RefSeq CDS 3003489 3003968 . + 0 ID=cds2824;Parent=gene2931;Dbxref=ASAP:ABE-0009418,UniProtKB/Swiss-Prot:Q46801,Genbank:NP_417344.1,EcoGene:EG13051,GeneID:945148;Name=NP_417344.1;gbkey=CDS;gene=xdhC;product=xanthine dehydrogenase%2C Fe-S binding subunit;protein_id=NP_417344.1;transl_table=11 NC_000913.3 RefSeq gene 3004008 3005786 . - . ID=gene2932;Dbxref=EcoGene:EG13052,GeneID:947320;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;gene_synonym=ECK2865,JW2837;locus_tag=b2869 NC_000913.3 RefSeq CDS 3004008 3005786 . - 0 ID=cds2825;Parent=gene2932;Dbxref=ASAP:ABE-0009420,UniProtKB/Swiss-Prot:Q46802,Genbank:NP_417345.1,EcoGene:EG13052,GeneID:947320;Name=NP_417345.1;Note=putative transcriptional regulator;gbkey=CDS;gene=ygeV;product=putative sigma-54-interacting transcriptional activator;protein_id=NP_417345.1;transl_table=11 NC_000913.3 RefSeq gene 3006262 3007452 . + . ID=gene2933;Dbxref=EcoGene:EG13053,GeneID:945826;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;gene_synonym=ECK2866,JW5463;locus_tag=b2870 NC_000913.3 RefSeq CDS 3006262 3007452 . + 0 ID=cds2826;Parent=gene2933;Dbxref=ASAP:ABE-0009425,UniProtKB/Swiss-Prot:Q46803,Genbank:YP_026185.1,EcoGene:EG13053,GeneID:945826;Name=YP_026185.1;Note=putative carbamoyl transferase;gbkey=CDS;gene=ygeW;product=putative carbamoyltransferase;protein_id=YP_026185.1;transl_table=11 NC_000913.3 RefSeq gene 3007510 3008706 . + . ID=gene2934;Dbxref=EcoGene:EG13054,GeneID:947012;Name=ygeX;gbkey=Gene;gene=ygeX;gene_biotype=protein_coding;gene_synonym=ECK2867,JW2839;locus_tag=b2871 NC_000913.3 RefSeq CDS 3007510 3008706 . + 0 ID=cds2827;Parent=gene2934;Dbxref=ASAP:ABE-0009428,UniProtKB/Swiss-Prot:P66899,Genbank:NP_417347.1,EcoGene:EG13054,GeneID:947012;Name=NP_417347.1;Note=putative diaminopropionate ammonia-lyase;gbkey=CDS;gene=ygeX;product=2%2C3-diaminopropionate ammonia lyase%2C PLP-dependent;protein_id=NP_417347.1;transl_table=11 NC_000913.3 RefSeq gene 3008764 3009975 . + . ID=gene2935;Dbxref=EcoGene:EG13055,GeneID:947360;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;gene_synonym=ECK2868,JW2840;locus_tag=b2872 NC_000913.3 RefSeq CDS 3008764 3009975 . + 0 ID=cds2828;Parent=gene2935;Dbxref=ASAP:ABE-0009434,UniProtKB/Swiss-Prot:P65807,Genbank:NP_417348.1,EcoGene:EG13055,GeneID:947360;Name=NP_417348.1;Note=putative deacetylase;gbkey=CDS;gene=ygeY;product=putative peptidase;protein_id=NP_417348.1;transl_table=11 NC_000913.3 RefSeq gene 3010028 3011413 . + . ID=gene2936;Dbxref=EcoGene:EG13056,GeneID:947359;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;gene_synonym=ECK2869,JW2841,ygeZ;locus_tag=b2873 NC_000913.3 RefSeq CDS 3010028 3011413 . + 0 ID=cds2829;Parent=gene2936;Dbxref=ASAP:ABE-0009436,UniProtKB/Swiss-Prot:Q46806,Genbank:NP_417349.4,EcoGene:EG13056,GeneID:947359;Name=NP_417349.4;gbkey=CDS;gene=hyuA;product=D-stereospecific phenylhydantoinase;protein_id=NP_417349.4;transl_table=11 NC_000913.3 RefSeq gene 3011461 3012393 . + . ID=gene2937;Dbxref=EcoGene:EG13057,GeneID:947358;Name=yqeA;gbkey=Gene;gene=yqeA;gene_biotype=protein_coding;gene_synonym=ECK2870,JW2842;locus_tag=b2874 NC_000913.3 RefSeq CDS 3011461 3012393 . + 0 ID=cds2830;Parent=gene2937;Dbxref=ASAP:ABE-0009438,UniProtKB/Swiss-Prot:Q46807,Genbank:NP_417350.1,EcoGene:EG13057,GeneID:947358;Name=NP_417350.1;Note=putative kinase;gbkey=CDS;gene=yqeA;product=putative amino acid kinase;protein_id=NP_417350.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3012401 3012604 . + . ID=id361;Note=RIP209 (repetitive extragenic palindromic) element%3B contains 4 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3012614 3014239 . - . ID=gene2938;Dbxref=EcoGene:EG13058,GeneID:947357;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;gene_synonym=ECK2871,JW2843;locus_tag=b2875 NC_000913.3 RefSeq CDS 3012614 3014239 . - 0 ID=cds2831;Parent=gene2938;Dbxref=ASAP:ABE-0009441,UniProtKB/Swiss-Prot:Q46808,Genbank:NP_417351.1,EcoGene:EG13058,GeneID:947357;Name=NP_417351.1;Note=putative synthases;gbkey=CDS;gene=yqeB;product=XdhC-CoxI family protein with NAD(P)-binding Rossman fold;protein_id=NP_417351.1;transl_table=11 NC_000913.3 RefSeq gene 3014287 3015057 . - . ID=gene2939;Dbxref=EcoGene:EG13059,GeneID:947350;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;gene_synonym=ECK2872,JW5464;locus_tag=b2876 NC_000913.3 RefSeq CDS 3014287 3015057 . - 0 ID=cds2832;Parent=gene2939;Dbxref=ASAP:ABE-0009443,UniProtKB/Swiss-Prot:Q46809,Genbank:NP_417352.2,EcoGene:EG13059,GeneID:947350;Name=NP_417352.2;gbkey=CDS;gene=yqeC;product=putative selenium-dependent hydroxylase accessory protein;protein_id=NP_417352.2;transl_table=11 NC_000913.3 RefSeq gene 3015160 3015738 . + . ID=gene2940;Dbxref=EcoGene:EG13060,GeneID:947356;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;gene_synonym=ECK2873,JW2845,ygfJ;locus_tag=b2877 NC_000913.3 RefSeq CDS 3015160 3015738 . + 0 ID=cds2833;Parent=gene2940;Dbxref=ASAP:ABE-0009447,UniProtKB/Swiss-Prot:Q46810,Genbank:NP_417353.1,EcoGene:EG13060,GeneID:947356;Name=NP_417353.1;gbkey=CDS;gene=mocA;product=CTP:molybdopterin cytidylyltransferase;protein_id=NP_417353.1;transl_table=11 NC_000913.3 RefSeq gene 3016060 3019158 . + . ID=gene2941;Dbxref=EcoGene:EG13061,GeneID:949068;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;gene_synonym=ECK2874,JW5923;locus_tag=b2878 NC_000913.3 RefSeq CDS 3016060 3019158 . + 0 ID=cds2834;Parent=gene2941;Dbxref=ASAP:ABE-0009450,UniProtKB/Swiss-Prot:Q46811,Genbank:NP_417354.1,EcoGene:EG13061,GeneID:949068;Name=NP_417354.1;Note=putative oxidoreductase%2C Fe-S subunit;gbkey=CDS;gene=ygfK;product=putative Fe-S subunit oxidoreductase subunit;protein_id=NP_417354.1;transl_table=11 NC_000913.3 RefSeq gene 3019161 3020489 . + . ID=gene2942;Dbxref=EcoGene:EG13062,GeneID:949072;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;gene_synonym=ECK2875,JW2847,ygfL;locus_tag=b2879 NC_000913.3 RefSeq CDS 3019161 3020489 . + 0 ID=cds2835;Parent=gene2942;Dbxref=ASAP:ABE-0009452,UniProtKB/Swiss-Prot:Q46812,Genbank:NP_417355.4,EcoGene:EG13062,GeneID:949072;Name=NP_417355.4;gbkey=CDS;gene=ssnA;product=putative chlorohydrolase/aminohydrolase;protein_id=NP_417355.4;transl_table=11 NC_000913.3 RefSeq gene 3020540 3021319 . + . ID=gene2943;Dbxref=EcoGene:EG13063,GeneID:949071;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;gene_synonym=ECK2876,JW2848;locus_tag=b2880 NC_000913.3 RefSeq CDS 3020540 3021319 . + 0 ID=cds2836;Parent=gene2943;Dbxref=ASAP:ABE-0009456,UniProtKB/Swiss-Prot:P64557,Genbank:NP_417356.1,EcoGene:EG13063,GeneID:949071;Name=NP_417356.1;gbkey=CDS;gene=ygfM;product=putative oxidoreductase;protein_id=NP_417356.1;transl_table=11 NC_000913.3 RefSeq gene 3021316 3024186 . + . ID=gene2944;Dbxref=EcoGene:EG13064,GeneID:949079;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;gene_synonym=ECK2877,JW2849,ygfN;locus_tag=b2881 NC_000913.3 RefSeq CDS 3021316 3024186 . + 0 ID=cds2837;Parent=gene2944;Dbxref=ASAP:ABE-0009459,UniProtKB/Swiss-Prot:Q46814,Genbank:NP_417357.1,EcoGene:EG13064,GeneID:949079;Name=NP_417357.1;gbkey=CDS;gene=xdhD;product=putative hypoxanthine oxidase%2C molybdopterin-binding/Fe-S binding;protein_id=NP_417357.1;transl_table=11 NC_000913.3 RefSeq gene 3024351 3025751 . + . ID=gene2945;Dbxref=EcoGene:EG13065,GeneID:949075;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;gene_synonym=ECK2878,JW2850,ygfO;locus_tag=b2882 NC_000913.3 RefSeq CDS 3024351 3025751 . + 0 ID=cds2838;Parent=gene2945;Dbxref=ASAP:ABE-0009463,UniProtKB/Swiss-Prot:P67444,Genbank:NP_417358.2,EcoGene:EG13065,GeneID:949075;Name=NP_417358.2;gbkey=CDS;gene=xanQ;product=xanthine permease;protein_id=NP_417358.2;transl_table=11 NC_000913.3 RefSeq gene 3025766 3027085 . + . ID=gene2946;Dbxref=EcoGene:EG13066,GeneID:947366;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;gene_synonym=ECK2879,JW5466,ygfP;locus_tag=b2883 NC_000913.3 RefSeq CDS 3025766 3027085 . + 0 ID=cds2839;Parent=gene2946;Dbxref=ASAP:ABE-0009465,UniProtKB/Swiss-Prot:P76641,Genbank:NP_417359.1,EcoGene:EG13066,GeneID:947366;Name=NP_417359.1;gbkey=CDS;gene=guaD;product=guanine deaminase;protein_id=NP_417359.1;transl_table=11 NC_000913.3 RefSeq gene 3027121 3028488 . + . ID=gene2947;Dbxref=EcoGene:EG13067,GeneID:2847748;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ECK2880,JW5467,ygfQ,ygfR;locus_tag=b4464 NC_000913.3 RefSeq CDS 3027121 3028488 . + 0 ID=cds2840;Parent=gene2947;Dbxref=ASAP:ABE-0174113,UniProtKB/Swiss-Prot:Q46817,Genbank:YP_026186.1,EcoGene:EG13067,GeneID:2847748;Name=YP_026186.1;gbkey=CDS;gene=ghxQ;product=guanine/hypoxanthine permease%2C high affinity%3B guanine/hypoxanthine:H+ symporter;protein_id=YP_026186.1;transl_table=11 NC_000913.3 RefSeq gene 3028524 3029012 . - . ID=gene2948;Dbxref=EcoGene:EG13069,GeneID:949016;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;gene_synonym=ECK2881,JW5468;locus_tag=b2886 NC_000913.3 RefSeq CDS 3028524 3029012 . - 0 ID=cds2841;Parent=gene2948;Dbxref=ASAP:ABE-0009471,UniProtKB/Swiss-Prot:Q46819,Genbank:NP_417362.4,EcoGene:EG13069,GeneID:949016;Name=NP_417362.4;Note=putative oxidoreductase%2C Fe-S subunit;gbkey=CDS;gene=ygfS;product=putative 4Fe-4S ferredoxin-type oxidoreductase subunit;protein_id=NP_417362.4;transl_table=11 NC_000913.3 RefSeq gene 3029012 3030931 . - . ID=gene2949;Dbxref=EcoGene:EG13070,GeneID:949018;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;gene_synonym=ECK2882,JW5469;locus_tag=b2887 NC_000913.3 RefSeq CDS 3029012 3030931 . - 0 ID=cds2842;Parent=gene2949;Dbxref=ASAP:ABE-0009473,UniProtKB/Swiss-Prot:Q46820,Genbank:NP_417363.2,EcoGene:EG13070,GeneID:949018;Name=NP_417363.2;Note=putative oxidoreductase%2C Fe-S subunit;gbkey=CDS;gene=ygfT;product=putative oxidoreductase%2C Fe-S subunit/nucleotide-binding subunit;protein_id=NP_417363.2;transl_table=11 NC_000913.3 RefSeq gene 3031367 3032815 . + . ID=gene2950;Dbxref=EcoGene:EG13071,GeneID:949017;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;gene_synonym=ECK2883,JW5470,ygfU;locus_tag=b2888 NC_000913.3 RefSeq CDS 3031367 3032815 . + 0 ID=cds2843;Parent=gene2950;Dbxref=ASAP:ABE-0009478,UniProtKB/Swiss-Prot:Q46821,Genbank:NP_417364.2,EcoGene:EG13071,GeneID:949017;Name=NP_417364.2;Note=putative permease;gbkey=CDS;gene=uacT;product=uric acid permease;protein_id=NP_417364.2;transl_table=11 NC_000913.3 RefSeq gene 3032817 3032942 . + . ID=gene2951;Dbxref=EcoGene:EG14489,GeneID:7751638;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;gene_synonym=ECK4499;locus_tag=b4684 NC_000913.3 RefSeq CDS 3032817 3032942 . + 0 ID=cds2844;Parent=gene2951;Dbxref=UniProtKB/Swiss-Prot:C1P614,Genbank:YP_002791254.1,EcoGene:EG14489,GeneID:7751638;Name=YP_002791254.1;gbkey=CDS;gene=yqfG;product=uncharacterized protein;protein_id=YP_002791254.1;transl_table=11 NC_000913.3 RefSeq gene 3033065 3033613 . + . ID=gene2952;Dbxref=EcoGene:EG13072,GeneID:949020;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;gene_synonym=ECK2884,JW2857,ygfV;locus_tag=b2889 NC_000913.3 RefSeq CDS 3033065 3033613 . + 0 ID=cds2845;Parent=gene2952;Dbxref=ASAP:ABE-0009484,UniProtKB/Swiss-Prot:Q46822,Genbank:NP_417365.1,EcoGene:EG13072,GeneID:949020;Name=NP_417365.1;gbkey=CDS;gene=idi;product=isopentenyl diphosphate isomerase;protein_id=NP_417365.1;transl_table=11 NC_000913.3 RefSeq gene 3033657 3035174 . - . ID=gene2953;Dbxref=EcoGene:EG10552,GeneID:947372;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;gene_synonym=asuD,ECK2885,herC,JW2858;locus_tag=b2890 NC_000913.3 RefSeq CDS 3033657 3035174 . - 0 ID=cds2846;Parent=gene2953;Dbxref=ASAP:ABE-0009486,UniProtKB/Swiss-Prot:P0A8N3,Genbank:NP_417366.1,EcoGene:EG10552,GeneID:947372;Name=NP_417366.1;Note=lysine tRNA synthetase%2C constitutive%3B suppressor of ColE1 mutation in primer RNA;gbkey=CDS;gene=lysS;product=lysine tRNA synthetase%2C constitutive;protein_id=NP_417366.1;transl_table=11 NC_000913.3 RefSeq gene 3035184 3036282 . - . ID=gene2954;Dbxref=EcoGene:EG10762,GeneID:947369;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;gene_synonym=ECK2886,JW5847,supK;locus_tag=b2891 NC_000913.3 RefSeq CDS 3036208 3036282 . - 0 ID=cds2847;Parent=gene2954;Dbxref=ASAP:ABE-0009488,UniProtKB/Swiss-Prot:P07012,Genbank:NP_417367.1,EcoGene:EG10762,GeneID:947369;Name=NP_417367.1;Note=an in-frame premature UGA termination codon is located within the prfB sequence%2C and a naturally occuring +1 frameshift is required for synthesis of RF-2;exception=ribosomal slippage;gbkey=CDS;gene=prfB;product=peptide chain release factor RF-2;protein_id=NP_417367.1;transl_table=11 NC_000913.3 RefSeq CDS 3035184 3036206 . - 0 ID=cds2847;Parent=gene2954;Dbxref=ASAP:ABE-0009488,UniProtKB/Swiss-Prot:P07012,Genbank:NP_417367.1,EcoGene:EG10762,GeneID:947369;Name=NP_417367.1;Note=an in-frame premature UGA termination codon is located within the prfB sequence%2C and a naturally occuring +1 frameshift is required for synthesis of RF-2;exception=ribosomal slippage;gbkey=CDS;gene=prfB;product=peptide chain release factor RF-2;protein_id=NP_417367.1;transl_table=11 NC_000913.3 RefSeq gene 3036373 3038106 . - . ID=gene2955;Dbxref=EcoGene:EG10830,GeneID:947367;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;gene_synonym=ECK2887,JW2860;locus_tag=b2892 NC_000913.3 RefSeq CDS 3036373 3038106 . - 0 ID=cds2848;Parent=gene2955;Dbxref=ASAP:ABE-0009492,UniProtKB/Swiss-Prot:P21893,Genbank:NP_417368.1,EcoGene:EG10830,GeneID:947367;Name=NP_417368.1;Note=ssDNA exonuclease%2C 5' --> 3' specific;gbkey=CDS;gene=recJ;product=ssDNA exonuclease%2C 5' --> 3'-specific;protein_id=NP_417368.1;transl_table=11 NC_000913.3 RefSeq gene 3038112 3038822 . - . ID=gene2956;Dbxref=EcoGene:EG11070,GeneID:947363;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;gene_synonym=ECK2888,JW2861,xprA;locus_tag=b2893 NC_000913.3 RefSeq CDS 3038112 3038822 . - 0 ID=cds2849;Parent=gene2956;Dbxref=ASAP:ABE-0009494,UniProtKB/Swiss-Prot:P0AEG6,Genbank:NP_417369.1,EcoGene:EG11070,GeneID:947363;Name=NP_417369.1;gbkey=CDS;gene=dsbC;product=protein disulfide isomerase II;protein_id=NP_417369.1;transl_table=11 NC_000913.3 RefSeq gene 3038847 3039743 . - . ID=gene2957;Dbxref=EcoGene:EG11071,GeneID:947362;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;gene_synonym=ECK2889,JW2862,xprB;locus_tag=b2894 NC_000913.3 RefSeq CDS 3038847 3039743 . - 0 ID=cds2850;Parent=gene2957;Dbxref=ASAP:ABE-0009500,UniProtKB/Swiss-Prot:P0A8P8,Genbank:NP_417370.1,EcoGene:EG11071,GeneID:947362;Name=NP_417370.1;gbkey=CDS;gene=xerD;product=site-specific tyrosine recombinase;protein_id=NP_417370.1;transl_table=11 NC_000913.3 RefSeq gene 3039855 3040376 . + . ID=gene2958;Dbxref=EcoGene:EG12697,GeneID:947361;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;gene_synonym=ECK2890,JW2863;locus_tag=b2895 NC_000913.3 RefSeq CDS 3039855 3040376 . + 0 ID=cds2851;Parent=gene2958;Dbxref=ASAP:ABE-0009503,UniProtKB/Swiss-Prot:P0ABY4,Genbank:NP_417371.1,EcoGene:EG12697,GeneID:947361;Name=NP_417371.1;gbkey=CDS;gene=fldB;product=flavodoxin 2;protein_id=NP_417371.1;transl_table=11 NC_000913.3 RefSeq gene 3040416 3040823 . - . ID=gene2959;Dbxref=EcoGene:EG13074,GeneID:947379;Name=cptA;gbkey=Gene;gene=cptA;gene_biotype=protein_coding;gene_synonym=ECK2891,JW2864,pigV,ygfX;locus_tag=b2896 NC_000913.3 RefSeq CDS 3040416 3040823 . - 0 ID=cds2852;Parent=gene2959;Dbxref=ASAP:ABE-0009505,UniProtKB/Swiss-Prot:Q46824,Genbank:NP_417372.1,EcoGene:EG13074,GeneID:947379;Name=NP_417372.1;gbkey=CDS;gene=cptA;product=toxin of CptAB toxin-antitoxin pair;protein_id=NP_417372.1;transl_table=11 NC_000913.3 RefSeq gene 3040804 3041070 . - . ID=gene2960;Dbxref=EcoGene:EG13075,GeneID:947382;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;gene_synonym=cptB,ECK2892,JW2865,ygfY;locus_tag=b2897 NC_000913.3 RefSeq CDS 3040804 3041070 . - 0 ID=cds2853;Parent=gene2960;Dbxref=ASAP:ABE-0009507,UniProtKB/Swiss-Prot:P64559,Genbank:NP_417373.1,EcoGene:EG13075,GeneID:947382;Name=NP_417373.1;gbkey=CDS;gene=sdhE;product=flavinator of succinate dehydrogenase%3B antitoxin of CptAB toxin-antitoxin pair;protein_id=NP_417373.1;transl_table=11 NC_000913.3 RefSeq gene 3041313 3042293 . + . ID=gene2961;Dbxref=EcoGene:EG12685,GeneID:947384;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;gene_synonym=ECK2893,JW2866,yzzW;locus_tag=b2898 NC_000913.3 RefSeq CDS 3041313 3042293 . + 0 ID=cds2854;Parent=gene2961;Dbxref=ASAP:ABE-0009512,UniProtKB/Swiss-Prot:P0ADE8,Genbank:NP_417374.1,EcoGene:EG12685,GeneID:947384;Name=NP_417374.1;gbkey=CDS;gene=ygfZ;product=iron-sulfur cluster repair protein%2C plumbagin resistance;protein_id=NP_417374.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3042321 3042475 . + . ID=id362;Note=REP210 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3042489 3043148 . - . ID=gene2962;Dbxref=EcoGene:EG13077,GeneID:947381;Name=yqfA;gbkey=Gene;gene=yqfA;gene_biotype=protein_coding;gene_synonym=ECK2894,JW2867;locus_tag=b2899 NC_000913.3 RefSeq CDS 3042489 3043148 . - 0 ID=cds2855;Parent=gene2962;Dbxref=ASAP:ABE-0009515,UniProtKB/Swiss-Prot:P67153,Genbank:NP_417375.1,EcoGene:EG13077,GeneID:947381;Name=NP_417375.1;Note=putative oxidoreductase;gbkey=CDS;gene=yqfA;product=hemolysin III family HylIII inner membrane protein;protein_id=NP_417375.1;transl_table=11 NC_000913.3 RefSeq gene 3043312 3043623 . - . ID=gene2963;Dbxref=EcoGene:EG13078,GeneID:947380;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;gene_synonym=ECK2895,JW2868;locus_tag=b2900 NC_000913.3 RefSeq CDS 3043312 3043623 . - 0 ID=cds2856;Parent=gene2963;Dbxref=ASAP:ABE-0009518,UniProtKB/Swiss-Prot:P67603,Genbank:NP_417376.1,EcoGene:EG13078,GeneID:947380;Name=NP_417376.1;gbkey=CDS;gene=yqfB;product=UPF0267 family protein;protein_id=NP_417376.1;transl_table=11 NC_000913.3 RefSeq gene 3043662 3045101 . + . ID=gene2964;Dbxref=EcoGene:EG13079,GeneID:947378;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;gene_synonym=bglD,ECK2896,JW2869,yqfC;locus_tag=b2901 NC_000913.3 RefSeq CDS 3043662 3045101 . + 0 ID=cds2857;Parent=gene2964;Dbxref=ASAP:ABE-0009523,UniProtKB/Swiss-Prot:Q46829,Genbank:NP_417377.1,EcoGene:EG13079,GeneID:947378;Name=NP_417377.1;Note=6-phospho-beta-glucosidase A%3B cryptic;gbkey=CDS;gene=bglA;product=6-phospho-beta-glucosidase A;protein_id=NP_417377.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3045113 3045140 . + . ID=id363;Note=REP211 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3045158 3045901 . - . ID=gene2965;Dbxref=EcoGene:EG12971,GeneID:947373;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;gene_synonym=ECK2897,JW2870,yqfD;locus_tag=b2902 NC_000913.3 RefSeq CDS 3045158 3045901 . - 0 ID=cds2858;Parent=gene2965;Dbxref=ASAP:ABE-0009526,UniProtKB/Swiss-Prot:P52037,Genbank:NP_417378.1,EcoGene:EG12971,GeneID:947373;Name=NP_417378.1;Note=putative oxidoreductase;gbkey=CDS;gene=ygfF;product=putative NAD(P)-dependent oxidoreductase;protein_id=NP_417378.1;transl_table=11 NC_000913.3 RefSeq gene 3046168 3049041 . - . ID=gene2966;Dbxref=EcoGene:EG11810,GeneID:947394;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;gene_synonym=ECK2898,JW2871;locus_tag=b2903 NC_000913.3 RefSeq CDS 3046168 3049041 . - 0 ID=cds2859;Parent=gene2966;Dbxref=ASAP:ABE-0009531,UniProtKB/Swiss-Prot:P33195,Genbank:NP_417379.1,EcoGene:EG11810,GeneID:947394;Name=NP_417379.1;Note=glycine decarboxylase%2C P protein of glycine cleavage system;gbkey=CDS;gene=gcvP;product=glycine decarboxylase%2C PLP-dependent%2C subunit P of glycine cleavage complex;protein_id=NP_417379.1;transl_table=11 NC_000913.3 RefSeq gene 3049160 3049549 . - . ID=gene2967;Dbxref=EcoGene:EG10371,GeneID:947393;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;gene_synonym=ECK2899,JW2872;locus_tag=b2904 NC_000913.3 RefSeq CDS 3049160 3049549 . - 0 ID=cds2860;Parent=gene2967;Dbxref=ASAP:ABE-0009534,UniProtKB/Swiss-Prot:P0A6T9,Genbank:NP_417380.1,EcoGene:EG10371,GeneID:947393;Name=NP_417380.1;Note=in glycine cleavage complex%2C carrier of aminomethyl moiety via covalently bound lipoyl cofactor;gbkey=CDS;gene=gcvH;product=glycine cleavage complex lipoylprotein;protein_id=NP_417380.1;transl_table=11 NC_000913.3 RefSeq gene 3049573 3050667 . - . ID=gene2968;Dbxref=EcoGene:EG11442,GeneID:947390;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;gene_synonym=ECK2900,JW2873;locus_tag=b2905 NC_000913.3 RefSeq CDS 3049573 3050667 . - 0 ID=cds2861;Parent=gene2968;Dbxref=ASAP:ABE-0009536,UniProtKB/Swiss-Prot:P27248,Genbank:NP_417381.1,EcoGene:EG11442,GeneID:947390;Name=NP_417381.1;Note=aminomethyltransferase (T protein%3B tetrahydrofolate-dependent) of glycine cleavage system;gbkey=CDS;gene=gcvT;product=aminomethyltransferase%2C tetrahydrofolate-dependent%2C subunit (T protein) of glycine cleavage complex;protein_id=NP_417381.1;transl_table=11 NC_000913.3 RefSeq gene 3051115 3052317 . - . ID=gene2969;Dbxref=EcoGene:EG11333,GeneID:947389;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=ECK2901,JW2874,visC;locus_tag=b2906 NC_000913.3 RefSeq CDS 3051115 3052317 . - 0 ID=cds2862;Parent=gene2969;Dbxref=ASAP:ABE-0009543,UniProtKB/Swiss-Prot:P25535,Genbank:NP_417382.1,EcoGene:EG11333,GeneID:947389;Name=NP_417382.1;gbkey=CDS;gene=ubiI;product=2-octaprenylphenol hydroxylase%2C FAD-dependent;protein_id=NP_417382.1;transl_table=11 NC_000913.3 RefSeq gene 3052340 3053518 . - . ID=gene2970;Dbxref=EcoGene:EG11324,GeneID:947388;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=acd,ECK2902,JW2875,visB;locus_tag=b2907 NC_000913.3 RefSeq CDS 3052340 3053518 . - 0 ID=cds2863;Parent=gene2970;Dbxref=ASAP:ABE-0009545,UniProtKB/Swiss-Prot:P25534,Genbank:NP_417383.1,EcoGene:EG11324,GeneID:947388;Name=NP_417383.1;Note=2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1%2C 4-benzoquinone;gbkey=CDS;gene=ubiH;product=2-octaprenyl-6-methoxyphenol hydroxylase%2C FAD/NAD(P)-binding;protein_id=NP_417383.1;transl_table=11 NC_000913.3 RefSeq gene 3053515 3054840 . - . ID=gene2971;Dbxref=EcoGene:EG10697,GeneID:947385;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;gene_synonym=ECK2903,JW2876;locus_tag=b2908 NC_000913.3 RefSeq CDS 3053515 3054840 . - 0 ID=cds2864;Parent=gene2971;Dbxref=ASAP:ABE-0009549,UniProtKB/Swiss-Prot:P15034,Genbank:NP_417384.1,EcoGene:EG10697,GeneID:947385;Name=NP_417384.1;gbkey=CDS;gene=pepP;product=proline aminopeptidase P II;protein_id=NP_417384.1;transl_table=11 NC_000913.3 RefSeq gene 3054866 3055444 . - . ID=gene2972;Dbxref=EcoGene:EG11323,GeneID:947400;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;gene_synonym=ECK2904,JW5473;locus_tag=b2909 NC_000913.3 RefSeq CDS 3054866 3055444 . - 0 ID=cds2865;Parent=gene2972;Dbxref=ASAP:ABE-0009551,UniProtKB/Swiss-Prot:P0A8C4,Genbank:NP_417385.4,EcoGene:EG11323,GeneID:947400;Name=NP_417385.4;gbkey=CDS;gene=ygfB;product=UPF0149 family protein;protein_id=NP_417385.4;transl_table=11 NC_000913.3 RefSeq gene 3055612 3055941 . + . ID=gene2973;Dbxref=EcoGene:EG12878,GeneID:947404;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;gene_synonym=ECK2905,JW2878,ygfE;locus_tag=b2910 NC_000913.3 RefSeq CDS 3055612 3055941 . + 0 ID=cds2866;Parent=gene2973;Dbxref=ASAP:ABE-0009554,UniProtKB/Swiss-Prot:P0ADS2,Genbank:NP_417386.1,EcoGene:EG12878,GeneID:947404;Name=NP_417386.1;gbkey=CDS;gene=zapA;product=FtsZ stabilizer;protein_id=NP_417386.1;transl_table=11 NC_000913.3 RefSeq gene 3055983 3056165 . + . ID=gene2974;Dbxref=EcoGene:EG30099,GeneID:947405;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;gene_synonym=ECK2906,JWR0067,ssr,ssrI;locus_tag=b2911 NC_000913.3 RefSeq ncRNA 3055983 3056165 . + . ID=rna106;Parent=gene2974;Dbxref=ASAP:ABE-0009556,EcoGene:EG30099,GeneID:947405;Note=template for RNA-directed pRNA synthesis by RNAP%3B mimics an open promoter;gbkey=ncRNA;gene=ssrS;ncrna_class=other;product=6S RNA inhibits RNA polymerase promoter binding NC_000913.3 RefSeq exon 3055983 3056165 . + . ID=id364;Parent=rna106;Dbxref=ASAP:ABE-0009556,EcoGene:EG30099,GeneID:947405;Note=template for RNA-directed pRNA synthesis by RNAP%3B mimics an open promoter;gbkey=ncRNA;gene=ssrS;ncrna_class=other;product=6S RNA inhibits RNA polymerase promoter binding NC_000913.3 RefSeq gene 3056241 3056789 . + . ID=gene2975;Dbxref=EcoGene:EG11158,GeneID:945167;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;gene_synonym=ECK2907,JW2879,ygfA;locus_tag=b2912 NC_000913.3 RefSeq CDS 3056241 3056789 . + 0 ID=cds2867;Parent=gene2975;Dbxref=ASAP:ABE-0009559,UniProtKB/Swiss-Prot:P0AC28,Genbank:NP_417387.3,EcoGene:EG11158,GeneID:945167;Name=NP_417387.3;Note=putative ligase;gbkey=CDS;gene=fau;product=5-formyltetrahydrofolate cyclo-ligase family protein;protein_id=NP_417387.3;transl_table=11 NC_000913.3 RefSeq gene 3056849 3056988 . + . ID=gene2976;Dbxref=EcoGene:EG31159,GeneID:2847749;Name=sibC;gbkey=Gene;gene=sibC;gene_biotype=antisense_RNA;gene_synonym=ECK2908,JWR0250,QUAD1c,rygC,t27;locus_tag=b4446 NC_000913.3 RefSeq ncRNA 3056849 3056988 . + . ID=rna107;Parent=gene2976;Dbxref=ASAP:ABE-0047266,EcoGene:EG31159,GeneID:2847749;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsC protein NC_000913.3 RefSeq exon 3056849 3056988 . + . ID=id365;Parent=rna107;Dbxref=ASAP:ABE-0047266,EcoGene:EG31159,GeneID:2847749;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibC;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsC protein NC_000913.3 RefSeq gene 3056890 3056949 . - . ID=gene2977;Dbxref=EcoGene:EG14470,GeneID:7751627;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;gene_synonym=ECK4480;locus_tag=b4665 NC_000913.3 RefSeq CDS 3056890 3056949 . - 0 ID=cds2868;Parent=gene2977;Dbxref=UniProtKB/Swiss-Prot:C1P615,Genbank:YP_002791255.1,EcoGene:EG14470,GeneID:7751627;Name=YP_002791255.1;gbkey=CDS;gene=ibsC;product=toxic membrane protein;protein_id=YP_002791255.1;transl_table=11 NC_000913.3 RefSeq gene 3057178 3058410 . - . ID=gene2978;Dbxref=EcoGene:EG10944,GeneID:945258;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;gene_synonym=ECK2909,JW2880;locus_tag=b2913 NC_000913.3 RefSeq CDS 3057178 3058410 . - 0 ID=cds2869;Parent=gene2978;Dbxref=ASAP:ABE-0009561,UniProtKB/Swiss-Prot:P0A9T0,Genbank:NP_417388.1,EcoGene:EG10944,GeneID:945258;Name=NP_417388.1;gbkey=CDS;gene=serA;product=D-3-phosphoglycerate dehydrogenase;protein_id=NP_417388.1;transl_table=11 NC_000913.3 RefSeq gene 3058666 3059325 . - . ID=gene2979;Dbxref=EcoGene:EG11443,GeneID:947407;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;gene_synonym=ECK2910,JW5475,ygfC;locus_tag=b2914 NC_000913.3 RefSeq CDS 3058666 3059325 . - 0 ID=cds2870;Parent=gene2979;Dbxref=ASAP:ABE-0009567,UniProtKB/Swiss-Prot:P0A7Z0,Genbank:NP_417389.1,EcoGene:EG11443,GeneID:947407;Name=NP_417389.1;Note=ribosephosphate isomerase%2C constitutive;gbkey=CDS;gene=rpiA;product=ribose 5-phosphate isomerase%2C constitutive;protein_id=NP_417389.1;transl_table=11 NC_000913.3 RefSeq gene 3059381 3059701 . - . ID=gene2980;Dbxref=EcoGene:EG13163,GeneID:946707;Name=yqfE;gbkey=Gene;gene=yqfE;gene_biotype=pseudogene;gene_synonym=ECK2911,JW2882;locus_tag=b2915;pseudo=true NC_000913.3 RefSeq CDS 3059381 3059701 . - 0 ID=cds2871;Parent=gene2980;Dbxref=ASAP:ABE-0009570,UniProtKB/Swiss-Prot:P64562,EcoGene:EG13163,GeneID:946707;Note=pseudogene%2C LysR family;gbkey=CDS;gene=yqfE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3059753 3060646 . + . ID=gene2981;Dbxref=EcoGene:EG10490,GeneID:944867;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;gene_synonym=can,canR,ECK2912,iciA,JW2883;locus_tag=b2916 NC_000913.3 RefSeq CDS 3059753 3060646 . + 0 ID=cds2872;Parent=gene2981;Dbxref=ASAP:ABE-0009574,UniProtKB/Swiss-Prot:P0A8S1,Genbank:NP_417391.1,EcoGene:EG10490,GeneID:944867;Name=NP_417391.1;Note=replication initiation inhibitor%2C binds to 13-mers at oriC;gbkey=CDS;gene=argP;product=transcriptional regulator for arginine transport and DNA replication genes%3B replication initiation inhibitor;protein_id=NP_417391.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3060660 3060680 . + . ID=id366;Note=REP212 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3060850 3062994 . + . ID=gene2982;Dbxref=EcoGene:EG11444,GeneID:945576;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;gene_synonym=ECK2913,JW2884,mcm,sbm,yliK;locus_tag=b2917 NC_000913.3 RefSeq CDS 3060850 3062994 . + 0 ID=cds2873;Parent=gene2982;Dbxref=ASAP:ABE-0009577,UniProtKB/Swiss-Prot:P27253,Genbank:NP_417392.1,EcoGene:EG11444,GeneID:945576;Name=NP_417392.1;Note=methylmalonyl-CoA mutase (MCM);gbkey=CDS;gene=scpA;product=methylmalonyl-CoA mutase;protein_id=NP_417392.1;transl_table=11 NC_000913.3 RefSeq gene 3062987 3063982 . + . ID=gene2983;Dbxref=EcoGene:EG11445,GeneID:947412;Name=argK;gbkey=Gene;gene=argK;gene_biotype=protein_coding;gene_synonym=ECK2914,JW2885,meaB,scpK?,ygfD;locus_tag=b2918 NC_000913.3 RefSeq CDS 3062987 3063982 . + 0 ID=cds2874;Parent=gene2983;Dbxref=ASAP:ABE-0009579,UniProtKB/Swiss-Prot:P27254,Genbank:NP_417393.1,EcoGene:EG11445,GeneID:947412;Name=NP_417393.1;gbkey=CDS;gene=argK;product=membrane ATPase/protein kinase;protein_id=NP_417393.1;transl_table=11 NC_000913.3 RefSeq gene 3063993 3064778 . + . ID=gene2984;Dbxref=EcoGene:EG12972,GeneID:947408;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;gene_synonym=ECK2915,JW2886,mmcD,ygfG;locus_tag=b2919 NC_000913.3 RefSeq CDS 3063993 3064778 . + 0 ID=cds2875;Parent=gene2984;Dbxref=ASAP:ABE-0009581,UniProtKB/Swiss-Prot:P52045,Genbank:NP_417394.4,EcoGene:EG12972,GeneID:947408;Name=NP_417394.4;Note=putative enzyme;gbkey=CDS;gene=scpB;product=methylmalonyl-CoA decarboxylase%2C biotin-independent;protein_id=NP_417394.4;transl_table=11 NC_000913.3 RefSeq gene 3064802 3066280 . + . ID=gene2985;Dbxref=EcoGene:EG12973,GeneID:947402;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;gene_synonym=ECK2916,JW2887,ygfH;locus_tag=b2920 NC_000913.3 RefSeq CDS 3064802 3066280 . + 0 ID=cds2876;Parent=gene2985;Dbxref=ASAP:ABE-0009583,UniProtKB/Swiss-Prot:P52043,Genbank:NP_417395.1,EcoGene:EG12973,GeneID:947402;Name=NP_417395.1;Note=putative coenzyme A transferase;gbkey=CDS;gene=scpC;product=propionyl-CoA:succinate CoA transferase;protein_id=NP_417395.1;transl_table=11 NC_000913.3 RefSeq gene 3066277 3067173 . - . ID=gene2986;Dbxref=EcoGene:EG12974,GeneID:947401;Name=ygfI;gbkey=Gene;gene=ygfI;gene_biotype=protein_coding;gene_synonym=ECK2917,JW5476;locus_tag=b2921 NC_000913.3 RefSeq CDS 3066277 3067173 . - 0 ID=cds2877;Parent=gene2986;Dbxref=ASAP:ABE-0009585,UniProtKB/Swiss-Prot:P52044,Genbank:NP_417396.4,EcoGene:EG12974,GeneID:947401;Name=NP_417396.4;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ygfI;product=putative DNA-binding transcriptional regulator;protein_id=NP_417396.4;transl_table=11 NC_000913.3 RefSeq gene 3067340 3068080 . - . ID=gene2987;Dbxref=EcoGene:EG11244,GeneID:947398;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;gene_synonym=ECK2918,JW2889;locus_tag=b2922 NC_000913.3 RefSeq CDS 3067340 3068080 . - 0 ID=cds2878;Parent=gene2987;Dbxref=ASAP:ABE-0009588,UniProtKB/Swiss-Prot:P0ADS6,Genbank:NP_417397.1,EcoGene:EG11244,GeneID:947398;Name=NP_417397.1;Note=putative actin;gbkey=CDS;gene=yggE;product=oxidative stress defense protein;protein_id=NP_417397.1;transl_table=11 NC_000913.3 RefSeq gene 3068173 3068808 . - . ID=gene2988;Dbxref=EcoGene:EG11159,GeneID:947418;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;gene_synonym=ECK2919,JW2890,yggA;locus_tag=b2923 NC_000913.3 RefSeq CDS 3068173 3068808 . - 0 ID=cds2879;Parent=gene2988;Dbxref=ASAP:ABE-0009591,UniProtKB/Swiss-Prot:P11667,Genbank:NP_417398.1,EcoGene:EG11159,GeneID:947418;Name=NP_417398.1;gbkey=CDS;gene=argO;product=arginine transporter;protein_id=NP_417398.1;transl_table=11 NC_000913.3 RefSeq gene 3068947 3069807 . - . ID=gene2989;Dbxref=EcoGene:EG11160,GeneID:947416;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;gene_synonym=ECK2920,JW2891,yggB;locus_tag=b2924 NC_000913.3 RefSeq CDS 3068947 3069807 . - 0 ID=cds2880;Parent=gene2989;Dbxref=ASAP:ABE-0009595,UniProtKB/Swiss-Prot:P0C0S1,Genbank:NP_417399.1,EcoGene:EG11160,GeneID:947416;Name=NP_417399.1;gbkey=CDS;gene=mscS;product=mechanosensitive channel protein%2C small conductance;protein_id=NP_417399.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3070003 3070100 . + . ID=id367;Note=RIP213 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3070165 3071244 . - . ID=gene2990;Dbxref=EcoGene:EG10282,GeneID:947415;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;gene_synonym=ald,ECK2921,fba,fda,JW2892;locus_tag=b2925 NC_000913.3 RefSeq CDS 3070165 3071244 . - 0 ID=cds2881;Parent=gene2990;Dbxref=ASAP:ABE-0009600,UniProtKB/Swiss-Prot:P0AB71,Genbank:NP_417400.1,EcoGene:EG10282,GeneID:947415;Name=NP_417400.1;gbkey=CDS;gene=fbaA;product=fructose-bisphosphate aldolase%2C class II;protein_id=NP_417400.1;transl_table=11 NC_000913.3 RefSeq gene 3071459 3072622 . - . ID=gene2991;Dbxref=EcoGene:EG10703,GeneID:947414;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;gene_synonym=ECK2922,JW2893;locus_tag=b2926 NC_000913.3 RefSeq CDS 3071459 3072622 . - 0 ID=cds2882;Parent=gene2991;Dbxref=ASAP:ABE-0009605,UniProtKB/Swiss-Prot:P0A799,Genbank:NP_417401.1,EcoGene:EG10703,GeneID:947414;Name=NP_417401.1;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=NP_417401.1;transl_table=11 NC_000913.3 RefSeq gene 3072672 3073691 . - . ID=gene2992;Dbxref=EcoGene:EG10368,GeneID:947413;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;gene_synonym=ECK2923,gapB,JW2894;locus_tag=b2927 NC_000913.3 RefSeq CDS 3072672 3073691 . - 0 ID=cds2883;Parent=gene2992;Dbxref=ASAP:ABE-0009607,UniProtKB/Swiss-Prot:P0A9B6,Genbank:NP_417402.1,EcoGene:EG10368,GeneID:947413;Name=NP_417402.1;gbkey=CDS;gene=epd;product=D-erythrose 4-phosphate dehydrogenase;protein_id=NP_417402.1;transl_table=11 NC_000913.3 RefSeq gene 3073976 3074689 . - . ID=gene2993;Dbxref=EcoGene:EG11161,GeneID:947419;Name=yggC;gbkey=Gene;gene=yggC;gene_biotype=protein_coding;gene_synonym=ECK2924,JW2895;locus_tag=b2928 NC_000913.3 RefSeq CDS 3073976 3074689 . - 0 ID=cds2884;Parent=gene2993;Dbxref=ASAP:ABE-0009610,UniProtKB/Swiss-Prot:P11664,Genbank:NP_417403.1,EcoGene:EG11161,GeneID:947419;Name=NP_417403.1;Note=putative kinase;gbkey=CDS;gene=yggC;product=putative PanK family P-loop kinase;protein_id=NP_417403.1;transl_table=11 NC_000913.3 RefSeq gene 3074686 3075195 . - . ID=gene2994;Dbxref=EcoGene:EG11162,GeneID:946861;Name=yggD;gbkey=Gene;gene=yggD;gene_biotype=protein_coding;gene_synonym=ECK2925,JW2896;locus_tag=b2929 NC_000913.3 RefSeq CDS 3074686 3075195 . - 0 ID=cds2885;Parent=gene2994;Dbxref=ASAP:ABE-0009612,UniProtKB/Swiss-Prot:P11663,Genbank:NP_417404.1,EcoGene:EG11162,GeneID:946861;Name=NP_417404.1;Note=putative transcriptional regulator;gbkey=CDS;gene=yggD;product=MtlR family putative transcriptional repressor;protein_id=NP_417404.1;transl_table=11 NC_000913.3 RefSeq gene 3075217 3076182 . - . ID=gene2995;Dbxref=EcoGene:EG11245,GeneID:947410;Name=yggF;gbkey=Gene;gene=yggF;gene_biotype=protein_coding;gene_synonym=ECK2926,JW2897,yggK;locus_tag=b2930 NC_000913.3 RefSeq CDS 3075217 3076182 . - 0 ID=cds2886;Parent=gene2995;Dbxref=ASAP:ABE-0009615,UniProtKB/Swiss-Prot:P21437,Genbank:NP_417405.1,EcoGene:EG11245,GeneID:947410;Name=NP_417405.1;gbkey=CDS;gene=yggF;product=fructose 1%2C6 bisphosphatase isozyme;protein_id=NP_417405.1;transl_table=11 NC_000913.3 RefSeq gene 3076179 3077456 . - . ID=gene2996;Dbxref=EcoGene:EG12976,GeneID:2847686;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;gene_synonym=ECK2927,JW5477;locus_tag=b4465 NC_000913.3 RefSeq CDS 3076179 3077456 . - 0 ID=cds2887;Parent=gene2996;Dbxref=ASAP:ABE-0174095,UniProtKB/Swiss-Prot:P52048,Genbank:YP_026187.1,EcoGene:EG12976,GeneID:2847686;Name=YP_026187.1;gbkey=CDS;gene=yggP;product=putative Zn-binding dehydrogenase;protein_id=YP_026187.1;transl_table=11 NC_000913.3 RefSeq gene 3077471 3078859 . - . ID=gene2997;Dbxref=EcoGene:EG11792,GeneID:945256;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;gene_synonym=ECK2928,JW2900;locus_tag=b2933 NC_000913.3 RefSeq CDS 3077471 3078859 . - 0 ID=cds2888;Parent=gene2997;Dbxref=ASAP:ABE-0009621,UniProtKB/Swiss-Prot:P69826,Genbank:NP_417408.1,EcoGene:EG11792,GeneID:945256;Name=NP_417408.1;Note=PTS system%2C mannitol-specific enzyme II component%2C cryptic;gbkey=CDS;gene=cmtA;product=putative mannitol-specific PTS IIB and IIC components;protein_id=NP_417408.1;transl_table=11 NC_000913.3 RefSeq gene 3078887 3079330 . - . ID=gene2998;Dbxref=EcoGene:EG11791,GeneID:945125;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;gene_synonym=ECK2929,JW2901,tolM;locus_tag=b2934 NC_000913.3 RefSeq CDS 3078887 3079330 . - 0 ID=cds2889;Parent=gene2998;Dbxref=ASAP:ABE-0009623,UniProtKB/Swiss-Prot:P69824,Genbank:NP_417409.1,EcoGene:EG11791,GeneID:945125;Name=NP_417409.1;Note=PTS system%2C mannitol-specific enzyme II component%2C cryptic;gbkey=CDS;gene=cmtB;product=putative mannitol-specific enzyme IIA component of PTS;protein_id=NP_417409.1;transl_table=11 NC_000913.3 RefSeq gene 3079644 3081635 . - . ID=gene2999;Dbxref=EcoGene:EG11427,GeneID:947420;Name=tktA;gbkey=Gene;gene=tktA;gene_biotype=protein_coding;gene_synonym=ECK2930,JW5478,tkt;locus_tag=b2935 NC_000913.3 RefSeq CDS 3079644 3081635 . - 0 ID=cds2890;Parent=gene2999;Dbxref=ASAP:ABE-0009625,UniProtKB/Swiss-Prot:P27302,Genbank:YP_026188.1,EcoGene:EG11427,GeneID:947420;Name=YP_026188.1;Note=transketolase 1 isozyme;gbkey=CDS;gene=tktA;product=transketolase 1%2C thiamine triphosphate-binding;protein_id=YP_026188.1;transl_table=11 NC_000913.3 RefSeq gene 3081913 3082671 . + . ID=gene3000;Dbxref=EcoGene:EG11291,GeneID:945173;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=ECK2931,JW2903,yggG;locus_tag=b2936 NC_000913.3 RefSeq CDS 3081913 3082671 . + 0 ID=cds2891;Parent=gene3000;Dbxref=ASAP:ABE-0009629,UniProtKB/Swiss-Prot:P25894,Genbank:NP_417411.2,EcoGene:EG11291,GeneID:945173;Name=NP_417411.2;gbkey=CDS;gene=loiP;product=Phe-Phe periplasmic metalloprotease%2C OM lipoprotein%3B low salt-inducible%3B Era-binding heat shock protein;protein_id=NP_417411.2;transl_table=11 NC_000913.3 RefSeq repeat_region 3082690 3082836 . + . ID=id368;Note=REP214 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3082877 3083797 . - . ID=gene3001;Dbxref=EcoGene:EG10960,GeneID:947715;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;gene_synonym=ECK2932,JW2904;locus_tag=b2937 NC_000913.3 RefSeq CDS 3082877 3083797 . - 0 ID=cds2892;Parent=gene3001;Dbxref=ASAP:ABE-0009632,UniProtKB/Swiss-Prot:P60651,Genbank:NP_417412.1,EcoGene:EG10960,GeneID:947715;Name=NP_417412.1;gbkey=CDS;gene=speB;product=agmatinase;protein_id=NP_417412.1;transl_table=11 NC_000913.3 RefSeq gene 3083935 3085911 . - . ID=gene3002;Dbxref=EcoGene:EG10959,GeneID:947432;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;gene_synonym=ECK2933,JW2905;locus_tag=b2938 NC_000913.3 RefSeq CDS 3083935 3085911 . - 0 ID=cds2893;Parent=gene3002;Dbxref=ASAP:ABE-0009634,UniProtKB/Swiss-Prot:P21170,Genbank:NP_417413.1,EcoGene:EG10959,GeneID:947432;Name=NP_417413.1;Note=biosynthetic arginine decarboxylase;gbkey=CDS;gene=speA;product=biosynthetic arginine decarboxylase%2C PLP-binding;protein_id=NP_417413.1;transl_table=11 NC_000913.3 RefSeq gene 3085920 3086051 . - . ID=gene3003;Dbxref=EcoGene:EG13164,GeneID:947433;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;gene_synonym=ECK2934,JW2906;locus_tag=b2939 NC_000913.3 RefSeq CDS 3085920 3086051 . - 0 ID=cds2894;Parent=gene3003;Dbxref=ASAP:ABE-0009638,UniProtKB/Swiss-Prot:P64567,Genbank:NP_417414.2,EcoGene:EG13164,GeneID:947433;Name=NP_417414.2;gbkey=CDS;gene=yqgB;product=uncharacterized protein;protein_id=NP_417414.2;transl_table=11 NC_000913.3 RefSeq gene 3086187 3086402 . + . ID=gene3004;Dbxref=EcoGene:EG13165,GeneID:945052;Name=yqgC;gbkey=Gene;gene=yqgC;gene_biotype=protein_coding;gene_synonym=ECK2935,JW2907;locus_tag=b2940 NC_000913.3 RefSeq CDS 3086187 3086402 . + 0 ID=cds2895;Parent=gene3004;Dbxref=ASAP:ABE-0009643,UniProtKB/Swiss-Prot:P64570,Genbank:NP_417415.1,EcoGene:EG13165,GeneID:945052;Name=NP_417415.1;gbkey=CDS;gene=yqgC;product=uncharacterized protein;protein_id=NP_417415.1;transl_table=11 NC_000913.3 RefSeq gene 3086706 3087860 . + . ID=gene3005;Dbxref=EcoGene:EG10589,GeneID:945389;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;gene_synonym=ECK2937,JW2909,metX;locus_tag=b2942 NC_000913.3 RefSeq CDS 3086706 3087860 . + 0 ID=cds2896;Parent=gene3005;Dbxref=ASAP:ABE-0009650,UniProtKB/Swiss-Prot:P0A817,Genbank:NP_417417.1,EcoGene:EG10589,GeneID:945389;Name=NP_417417.1;Note=methionine adenosyltransferase 1 (AdoMet synthetase)%3B methyl and propylamine donor%2C corepressor of met genes;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=NP_417417.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3087912 3087937 . + . ID=id369;Note=REP215 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3088284 3089678 . + . ID=gene3006;Dbxref=EcoGene:EG12148,GeneID:947434;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;gene_synonym=ECK2938,JW2910,Pgal;locus_tag=b2943 NC_000913.3 RefSeq CDS 3088284 3089678 . + 0 ID=cds2897;Parent=gene3006;Dbxref=ASAP:ABE-0009654,UniProtKB/Swiss-Prot:P0AEP1,Genbank:NP_417418.1,EcoGene:EG12148,GeneID:947434;Name=NP_417418.1;Note=galactose-proton symport of transport system;gbkey=CDS;gene=galP;product=D-galactose transporter;protein_id=NP_417418.1;transl_table=11 NC_000913.3 RefSeq gene 3089755 3090252 . + . ID=gene3007;Dbxref=EcoGene:EG12122,GeneID:947443;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;gene_synonym=ECK2939,JW2911,sprT;locus_tag=b2944 NC_000913.3 RefSeq CDS 3089755 3090252 . + 0 ID=cds2898;Parent=gene3007;Dbxref=ASAP:ABE-0009657,UniProtKB/Swiss-Prot:P39902,Genbank:NP_417419.1,EcoGene:EG12122,GeneID:947443;Name=NP_417419.1;gbkey=CDS;gene=yggI;product=Zn-dependent metalloprotease-related protein;protein_id=NP_417419.1;transl_table=11 NC_000913.3 RefSeq gene 3090347 3091054 . + . ID=gene3008;Dbxref=EcoGene:EG11336,GeneID:949092;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;gene_synonym=ECK2940,JW2912;locus_tag=b2945 NC_000913.3 RefSeq CDS 3090347 3091054 . + 0 ID=cds2899;Parent=gene3008;Dbxref=ASAP:ABE-0009661,UniProtKB/Swiss-Prot:P25736,Genbank:NP_417420.1,EcoGene:EG11336,GeneID:949092;Name=NP_417420.1;gbkey=CDS;gene=endA;product=DNA-specific endonuclease I;protein_id=NP_417420.1;transl_table=11 NC_000913.3 RefSeq gene 3091134 3091865 . + . ID=gene3009;Dbxref=EcoGene:EG12366,GeneID:945816;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;gene_synonym=ECK2941,JW2913,yggJ;locus_tag=b2946 NC_000913.3 RefSeq CDS 3091134 3091865 . + 0 ID=cds2900;Parent=gene3009;Dbxref=ASAP:ABE-0009665,UniProtKB/Swiss-Prot:P0AGL7,Genbank:NP_417421.4,EcoGene:EG12366,GeneID:945816;Name=NP_417421.4;gbkey=CDS;gene=rsmE;product=16S rRNA m(3)U1498 methyltransferase%2C SAM-dependent;protein_id=NP_417421.4;transl_table=11 NC_000913.3 RefSeq gene 3091878 3092828 . + . ID=gene3010;Dbxref=EcoGene:EG10419,GeneID:947445;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;gene_synonym=ECK2942,gsh-II,JW2914;locus_tag=b2947 NC_000913.3 RefSeq CDS 3091878 3092828 . + 0 ID=cds2901;Parent=gene3010;Dbxref=ASAP:ABE-0009667,UniProtKB/Swiss-Prot:P04425,Genbank:NP_417422.1,EcoGene:EG10419,GeneID:947445;Name=NP_417422.1;gbkey=CDS;gene=gshB;product=glutathione synthetase;protein_id=NP_417422.1;transl_table=11 NC_000913.3 RefSeq gene 3092937 3093500 . + . ID=gene3011;Dbxref=EcoGene:EG13289,GeneID:947442;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;gene_synonym=ECK2943,JW2915;locus_tag=b2948 NC_000913.3 RefSeq CDS 3092937 3093500 . + 0 ID=cds2902;Parent=gene3011;Dbxref=ASAP:ABE-0009669,UniProtKB/Swiss-Prot:P0A8W5,Genbank:NP_417423.4,EcoGene:EG13289,GeneID:947442;Name=NP_417423.4;gbkey=CDS;gene=yqgE;product=uncharacterized protein;protein_id=NP_417423.4;transl_table=11 NC_000913.3 RefSeq gene 3093500 3093916 . + . ID=gene3012;Dbxref=EcoGene:EG13290,GeneID:947439;Name=yqgF;gbkey=Gene;gene=yqgF;gene_biotype=protein_coding;gene_synonym=ECK2944,JW2916;locus_tag=b2949 NC_000913.3 RefSeq CDS 3093500 3093916 . + 0 ID=cds2903;Parent=gene3012;Dbxref=ASAP:ABE-0009672,UniProtKB/Swiss-Prot:P0A8I1,Genbank:NP_417424.1,EcoGene:EG13290,GeneID:947439;Name=NP_417424.1;gbkey=CDS;gene=yqgF;product=putative Holliday junction resolvase;protein_id=NP_417424.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3093966 3094090 . + . ID=id370;Note=REP216 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3094100 3095080 . - . ID=gene3013;Dbxref=EcoGene:EG12978,GeneID:947430;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;gene_synonym=ECK2945,JW2917;locus_tag=b2950 NC_000913.3 RefSeq CDS 3094100 3095080 . - 0 ID=cds2904;Parent=gene3013;Dbxref=ASAP:ABE-0009675,UniProtKB/Swiss-Prot:P52052,Genbank:NP_417425.2,EcoGene:EG12978,GeneID:947430;Name=NP_417425.2;Note=putative protein transport;gbkey=CDS;gene=yggR;product=putative PilT family AAA+ ATPase;protein_id=NP_417425.2;transl_table=11 NC_000913.3 RefSeq gene 3095098 3095802 . + . ID=gene3014;Dbxref=EcoGene:EG12979,GeneID:947423;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;gene_synonym=ECK2946,JW2918;locus_tag=b2951 NC_000913.3 RefSeq CDS 3095098 3095802 . + 0 ID=cds2905;Parent=gene3014;Dbxref=ASAP:ABE-0009681,UniProtKB/Swiss-Prot:P67080,Genbank:NP_417426.1,EcoGene:EG12979,GeneID:947423;Name=NP_417426.1;gbkey=CDS;gene=yggS;product=UPF0001 family protein%2C PLP-binding;protein_id=NP_417426.1;transl_table=11 NC_000913.3 RefSeq gene 3095820 3096386 . + . ID=gene3015;Dbxref=EcoGene:EG12980,GeneID:947421;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;gene_synonym=ECK2947,JW2919;locus_tag=b2952 NC_000913.3 RefSeq CDS 3095820 3096386 . + 0 ID=cds2906;Parent=gene3015;Dbxref=ASAP:ABE-0009685,UniProtKB/Swiss-Prot:P64564,Genbank:NP_417427.1,EcoGene:EG12980,GeneID:947421;Name=NP_417427.1;Note=conserved hypothetical integral membrane protein;gbkey=CDS;gene=yggT;product=putative inner membrane protein%3B compensates for loss in K+ uptake;protein_id=NP_417427.1;transl_table=11 NC_000913.3 RefSeq gene 3096383 3096673 . + . ID=gene3016;Dbxref=EcoGene:EG12981,GeneID:947424;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;gene_synonym=ECK2948,JW5479;locus_tag=b2953 NC_000913.3 RefSeq CDS 3096383 3096673 . + 0 ID=cds2907;Parent=gene3016;Dbxref=ASAP:ABE-0009690,UniProtKB/Swiss-Prot:P52060,Genbank:NP_417428.2,EcoGene:EG12981,GeneID:947424;Name=NP_417428.2;gbkey=CDS;gene=yggU;product=UPF0235 family protein;protein_id=NP_417428.2;transl_table=11 NC_000913.3 RefSeq gene 3096681 3097274 . + . ID=gene3017;Dbxref=EcoGene:EG12982,GeneID:947429;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;gene_synonym=ECK2949,JW2921,yggV;locus_tag=b2954 NC_000913.3 RefSeq CDS 3096681 3097274 . + 0 ID=cds2908;Parent=gene3017;Dbxref=ASAP:ABE-0009692,UniProtKB/Swiss-Prot:P52061,Genbank:NP_417429.1,EcoGene:EG12982,GeneID:947429;Name=NP_417429.1;Note=putative ribosomal protein;gbkey=CDS;gene=rdgB;product=dITP/XTP pyrophosphatase;protein_id=NP_417429.1;transl_table=11 NC_000913.3 RefSeq gene 3097267 3098403 . + . ID=gene3018;Dbxref=EcoGene:EG12983,GeneID:947446;Name=yggW;gbkey=Gene;gene=yggW;gene_biotype=protein_coding;gene_synonym=ECK2950,JW2922;locus_tag=b2955 NC_000913.3 RefSeq CDS 3097267 3098403 . + 0 ID=cds2909;Parent=gene3018;Dbxref=ASAP:ABE-0009694,UniProtKB/Swiss-Prot:P52062,Genbank:NP_417430.1,EcoGene:EG12983,GeneID:947446;Name=NP_417430.1;Note=putative oxidase;gbkey=CDS;gene=yggW;product=HemN family putative oxidoreductase;protein_id=NP_417430.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3098413 3098533 . + . ID=id371;Note=REP217 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3098558 3099565 . - . ID=gene3019;Dbxref=EcoGene:EG12704,GeneID:947455;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;gene_synonym=ECK2951,JW2923;locus_tag=b2956 NC_000913.3 RefSeq CDS 3098558 3099565 . - 0 ID=cds2910;Parent=gene3019;Dbxref=ASAP:ABE-0009697,UniProtKB/Swiss-Prot:P46142,Genbank:NP_417431.1,EcoGene:EG12704,GeneID:947455;Name=NP_417431.1;Note=putative alpha helix chain;gbkey=CDS;gene=yggM;product=DUF1202 family putative secreted protein;protein_id=NP_417431.1;transl_table=11 NC_000913.3 RefSeq gene 3099682 3100728 . - . ID=gene3020;Dbxref=EcoGene:EG10046,GeneID:947454;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;gene_synonym=ECK2952,JW2924;locus_tag=b2957 NC_000913.3 RefSeq CDS 3099682 3100728 . - 0 ID=cds2911;Parent=gene3020;Dbxref=ASAP:ABE-0009700,UniProtKB/Swiss-Prot:P00805,Genbank:NP_417432.1,EcoGene:EG10046,GeneID:947454;Name=NP_417432.1;gbkey=CDS;gene=ansB;product=periplasmic L-asparaginase 2;protein_id=NP_417432.1;transl_table=11 NC_000913.3 RefSeq gene 3100904 3101623 . - . ID=gene3021;Dbxref=EcoGene:EG12705,GeneID:947453;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;gene_synonym=ecfF,ECK2953,JW2925;locus_tag=b2958 NC_000913.3 RefSeq CDS 3100904 3101623 . - 0 ID=cds2912;Parent=gene3021;Dbxref=ASAP:ABE-0009706,UniProtKB/Swiss-Prot:P0ADS9,Genbank:NP_417433.1,EcoGene:EG12705,GeneID:947453;Name=NP_417433.1;gbkey=CDS;gene=yggN;product=DUF2884 family putative periplasmic protein;protein_id=NP_417433.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3101696 3101774 . + . ID=id372;Note=REP218 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3101807 3102133 . - . ID=gene3022;Dbxref=EcoGene:EG12443,GeneID:947449;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;gene_synonym=ECK2954,JW2926;locus_tag=b2959 NC_000913.3 RefSeq CDS 3101807 3102133 . - 0 ID=cds2913;Parent=gene3022;Dbxref=ASAP:ABE-0009712,UniProtKB/Swiss-Prot:P38521,Genbank:NP_417434.4,EcoGene:EG12443,GeneID:947449;Name=NP_417434.4;gbkey=CDS;gene=yggL;product=DUF469 family protein;protein_id=NP_417434.4;transl_table=11 NC_000913.3 RefSeq gene 3102133 3102852 . - . ID=gene3023;Dbxref=EcoGene:EG11779,GeneID:947448;Name=trmI;gbkey=Gene;gene=trmI;gene_biotype=protein_coding;gene_synonym=ECK2955,JW2927,trmB?,yggH;locus_tag=b2960 NC_000913.3 RefSeq CDS 3102133 3102852 . - 0 ID=cds2914;Parent=gene3023;Dbxref=ASAP:ABE-0009714,UniProtKB/Swiss-Prot:P0A8I5,Genbank:NP_417435.1,EcoGene:EG11779,GeneID:947448;Name=NP_417435.1;gbkey=CDS;gene=trmI;product=tRNA m(7)G46 methyltransferase%2C SAM-dependent;protein_id=NP_417435.1;transl_table=11 NC_000913.3 RefSeq gene 3103013 3104065 . + . ID=gene3024;Dbxref=EcoGene:EG10627,GeneID:947447;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;gene_synonym=ECK2956,JW2928,micA,mutB;locus_tag=b2961 NC_000913.3 RefSeq CDS 3103013 3104065 . + 0 ID=cds2915;Parent=gene3024;Dbxref=ASAP:ABE-0009720,UniProtKB/Swiss-Prot:P17802,Genbank:NP_417436.1,EcoGene:EG10627,GeneID:947447;Name=NP_417436.1;Note=adenine glycosylase%3B G.C --> T.A transversions;gbkey=CDS;gene=mutY;product=adenine DNA glycosylase;protein_id=NP_417436.1;transl_table=11 NC_000913.3 RefSeq gene 3104093 3104368 . + . ID=gene3025;Dbxref=EcoGene:EG12984,GeneID:947461;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;gene_synonym=ECK2957,JW2929;locus_tag=b2962 NC_000913.3 RefSeq CDS 3104093 3104368 . + 0 ID=cds2916;Parent=gene3025;Dbxref=ASAP:ABE-0009722,UniProtKB/Swiss-Prot:P0A8P3,Genbank:NP_417437.1,EcoGene:EG12984,GeneID:947461;Name=NP_417437.1;gbkey=CDS;gene=yggX;product=oxidative damage protective factor for iron-sulfur proteins;protein_id=NP_417437.1;transl_table=11 NC_000913.3 RefSeq gene 3104433 3105512 . + . ID=gene3026;Dbxref=EcoGene:EG12986,GeneID:945428;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;gene_synonym=ECK2958,JW5481,yggZ;locus_tag=b2963 NC_000913.3 RefSeq CDS 3104433 3105512 . + 0 ID=cds2917;Parent=gene3026;Dbxref=ASAP:ABE-0009725,UniProtKB/Swiss-Prot:P0C066,Genbank:NP_417438.2,EcoGene:EG12986,GeneID:945428;Name=NP_417438.2;gbkey=CDS;gene=mltC;product=membrane-bound lytic murein transglycosylase C;protein_id=NP_417438.2;transl_table=11 NC_000913.3 RefSeq gene 3105714 3106970 . + . ID=gene3027;Dbxref=EcoGene:EG10664,GeneID:946282;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;gene_synonym=ECK2959,JW2932;locus_tag=b2964 NC_000913.3 RefSeq CDS 3105714 3106970 . + 0 ID=cds2918;Parent=gene3027;Dbxref=ASAP:ABE-0009728,UniProtKB/Swiss-Prot:P0AFF4,Genbank:NP_417439.4,EcoGene:EG10664,GeneID:946282;Name=NP_417439.4;Note=transport of nucleosides%2C permease protein;gbkey=CDS;gene=nupG;product=nucleoside transporter;protein_id=NP_417439.4;transl_table=11 NC_000913.3 RefSeq gene 3107020 3109155 . - . ID=gene3028;Dbxref=EcoGene:EG10961,GeneID:947457;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;gene_synonym=ECK2960,JW5482;locus_tag=b2965 NC_000913.3 RefSeq CDS 3107020 3109155 . - 0 ID=cds2919;Parent=gene3028;Dbxref=ASAP:ABE-0009730,UniProtKB/Swiss-Prot:P21169,Genbank:NP_417440.4,EcoGene:EG10961,GeneID:947457;Name=NP_417440.4;Note=ornithine decarboxylase isozyme;gbkey=CDS;gene=speC;product=ornithine decarboxylase%2C constitutive;protein_id=NP_417440.4;transl_table=11 NC_000913.3 RefSeq gene 3109553 3110260 . + . ID=gene3029;Dbxref=EcoGene:EG12987,GeneID:947462;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;gene_synonym=ECK2961,JW2934;locus_tag=b2966 NC_000913.3 RefSeq CDS 3109553 3110260 . + 0 ID=cds2920;Parent=gene3029;Dbxref=ASAP:ABE-0009736,UniProtKB/Swiss-Prot:Q46831,Genbank:NP_417441.1,EcoGene:EG12987,GeneID:947462;Name=NP_417441.1;Note=putative transport protein;gbkey=CDS;gene=yqgA;product=DUF554 family putative inner membrane protein;protein_id=NP_417441.1;transl_table=11 NC_000913.3 RefSeq gene 3110366 3110441 . + . ID=gene3030;Dbxref=EcoGene:EG30065,GeneID:947463;Name=pheV;gbkey=Gene;gene=pheV;gene_biotype=tRNA;gene_synonym=ECK2962,JWR0068,pheC;locus_tag=b2967 NC_000913.3 RefSeq tRNA 3110366 3110441 . + . ID=rna108;Parent=gene3030;Dbxref=ASAP:ABE-0009738,EcoGene:EG30065,GeneID:947463;Note=anticodon: GAA;gbkey=tRNA;gene=pheV;product=tRNA-Phe NC_000913.3 RefSeq exon 3110366 3110441 . + . ID=id373;Parent=rna108;Dbxref=ASAP:ABE-0009738,EcoGene:EG30065,GeneID:947463;Note=anticodon: GAA;gbkey=tRNA;gene=pheV;product=tRNA-Phe NC_000913.3 RefSeq gene 3110590 3111126 . - . ID=gene3031;Dbxref=EcoGene:EG12988,GeneID:947025;Name=yghD;gbkey=Gene;gene=yghD;gene_biotype=protein_coding;gene_synonym=ecfC,ECK2963,gspMbeta,JW2935;locus_tag=b2968 NC_000913.3 RefSeq CDS 3110590 3111126 . - 0 ID=cds2921;Parent=gene3031;Dbxref=ASAP:ABE-0009740,UniProtKB/Swiss-Prot:Q46832,Genbank:NP_417442.1,EcoGene:EG12988,GeneID:947025;Name=NP_417442.1;Note=putative secretion pathway protein;gbkey=CDS;gene=yghD;product=putative membrane-anchored secretion pathway M-type protein;protein_id=NP_417442.1;transl_table=11 NC_000913.3 RefSeq gene 3111128 3112090 . - . ID=gene3032;Dbxref=EcoGene:EG12989,GeneID:945897;Name=yghE;gbkey=Gene;gene=yghE;gene_biotype=pseudogene;gene_synonym=ecfB,ECK2964,gspLbeta,JW5924;locus_tag=b2969;pseudo=true NC_000913.3 RefSeq CDS 3111128 3112090 . - 0 ID=cds2922;Parent=gene3032;Dbxref=ASAP:ABE-0009742,UniProtKB/Swiss-Prot:Q46833,EcoGene:EG12989,GeneID:945897;Note=pseudogene%2C secretion pathway protein%2C L-type protein homology~putative general secretion pathway for protein export (GSP);gbkey=CDS;gene=yghE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3112093 3112941 . - . ID=gene3033;Dbxref=EcoGene:EG12990,GeneID:947469;Name=yghF;gbkey=Gene;gene=yghF;gene_biotype=pseudogene;gene_synonym=ecfA,ECK2965,gspCbeta,JW5484;locus_tag=b2970;pseudo=true NC_000913.3 RefSeq CDS 3112093 3112941 . - 0 ID=cds2923;Parent=gene3033;Dbxref=ASAP:ABE-0009745,UniProtKB/Swiss-Prot:Q46834,EcoGene:EG12990,GeneID:947469;Note=pseudogene%2C secretion pathway protein%2C C-type protein homology%3Bputative transport%3B Not classified~putative general secretion pathway for protein export (GSP);gbkey=CDS;gene=yghF;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3113067 3113477 . - . ID=gene3034;Dbxref=EcoGene:EG12991,GeneID:947470;Name=yghG;gbkey=Gene;gene=yghG;gene_biotype=protein_coding;gene_synonym=ECK2966,gspSbeta,JW2938;locus_tag=b2971 NC_000913.3 RefSeq CDS 3113067 3113477 . - 0 ID=cds2924;Parent=gene3034;Dbxref=ASAP:ABE-0009748,UniProtKB/Swiss-Prot:Q46835,Genbank:NP_417445.1,EcoGene:EG12991,GeneID:947470;Name=NP_417445.1;gbkey=CDS;gene=yghG;product=secretin (GspDbeta) OM localization lipoprotein pilotin;protein_id=NP_417445.1;transl_table=11 NC_000913.3 RefSeq gene 3113543 3114352 . - . ID=gene3035;Dbxref=EcoGene:EG12992,GeneID:947467;Name=pppA;gbkey=Gene;gene=pppA;gene_biotype=protein_coding;gene_synonym=ECK2967,JW2939,yghH;locus_tag=b2972 NC_000913.3 RefSeq CDS 3113543 3114352 . - 0 ID=cds2925;Parent=gene3035;Dbxref=ASAP:ABE-0009751,UniProtKB/Swiss-Prot:Q46836,Genbank:NP_417446.4,EcoGene:EG12992,GeneID:947467;Name=NP_417446.4;gbkey=CDS;gene=pppA;product=bifunctional prepilin leader peptidase/ methylase;protein_id=NP_417446.4;transl_table=11 NC_000913.3 RefSeq repeat_region 3114378 3114545 . + . ID=id374;Note=REP219 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3114550 3119112 . - . ID=gene3036;Dbxref=EcoGene:EG12994,GeneID:2847716;Name=sslE;gbkey=Gene;gene=sslE;gene_biotype=protein_coding;gene_synonym=acfD,ECK2968,JW5925,yghJ;locus_tag=b4466 NC_000913.3 RefSeq CDS 3114550 3119112 . - 0 ID=cds2926;Parent=gene3036;Dbxref=ASAP:ABE-0174096,UniProtKB/Swiss-Prot:P0CK95,Genbank:YP_026189.1,EcoGene:EG12994,GeneID:2847716;Name=YP_026189.1;Note=putative lipoprotein;gbkey=CDS;gene=sslE;product=putative secreted and surface-associated lipoprotein mucinase;protein_id=YP_026189.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3119561 3119587 . + . ID=id375;Note=REP220 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3119597 3121279 . - . ID=gene3037;Dbxref=EcoGene:EG12995,GeneID:947259;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;gene_synonym=ECK2969,JW2942,yghK;locus_tag=b2975 NC_000913.3 RefSeq CDS 3119597 3121279 . - 0 ID=cds2927;Parent=gene3037;Dbxref=ASAP:ABE-0009763,UniProtKB/Swiss-Prot:Q46839,Genbank:NP_417449.1,EcoGene:EG12995,GeneID:947259;Name=NP_417449.1;Note=putative permease;gbkey=CDS;gene=glcA;product=glycolate transporter;protein_id=NP_417449.1;transl_table=11 NC_000913.3 RefSeq gene 3121634 3123805 . - . ID=gene3038;Dbxref=EcoGene:EG20080,GeneID:948857;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;gene_synonym=ECK2970,glc,JW2943;locus_tag=b2976 NC_000913.3 RefSeq CDS 3121634 3123805 . - 0 ID=cds2928;Parent=gene3038;Dbxref=ASAP:ABE-0009767,UniProtKB/Swiss-Prot:P37330,Genbank:NP_417450.1,EcoGene:EG20080,GeneID:948857;Name=NP_417450.1;gbkey=CDS;gene=glcB;product=malate synthase G;protein_id=NP_417450.1;transl_table=11 NC_000913.3 RefSeq gene 3123827 3124231 . - . ID=gene3039;Dbxref=EcoGene:EG12952,GeneID:947473;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;gene_synonym=ECK2971,JW2944,yghC;locus_tag=b2977 NC_000913.3 RefSeq CDS 3123827 3124231 . - 0 ID=cds2929;Parent=gene3039;Dbxref=ASAP:ABE-0009769,UniProtKB/Swiss-Prot:P0AEQ1,Genbank:NP_417451.1,EcoGene:EG12952,GeneID:947473;Name=NP_417451.1;gbkey=CDS;gene=glcG;product=DUF336 family protein;protein_id=NP_417451.1;transl_table=11 NC_000913.3 RefSeq gene 3124236 3125459 . - . ID=gene3040;Dbxref=EcoGene:EG13291,GeneID:2847717;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;gene_synonym=ECK2972,gox,JW5486,yghL;locus_tag=b4467 NC_000913.3 RefSeq CDS 3124236 3125459 . - 0 ID=cds2930;Parent=gene3040;Dbxref=ASAP:ABE-0174097,UniProtKB/Swiss-Prot:P52074,Genbank:YP_026190.1,EcoGene:EG13291,GeneID:2847717;Name=YP_026190.1;gbkey=CDS;gene=glcF;product=glycolate oxidase 4Fe-4S iron-sulfur cluster subunit;protein_id=YP_026190.1;transl_table=11 NC_000913.3 RefSeq gene 3125470 3126522 . - . ID=gene3041;Dbxref=EcoGene:EG12996,GeneID:2847718;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;gene_synonym=ECK2973,gox,JW5487,yghL;locus_tag=b4468 NC_000913.3 RefSeq CDS 3125470 3126522 . - 0 ID=cds2931;Parent=gene3041;Dbxref=ASAP:ABE-0174098,UniProtKB/Swiss-Prot:P52073,Genbank:YP_026191.1,EcoGene:EG12996,GeneID:2847718;Name=YP_026191.1;Note=glycolate oxidase iron-sulfur subunit;gbkey=CDS;gene=glcE;product=glycolate oxidase FAD binding subunit;protein_id=YP_026191.1;transl_table=11 NC_000913.3 RefSeq gene 3126522 3128021 . - . ID=gene3042;Dbxref=EcoGene:EG12997,GeneID:947353;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;gene_synonym=ECK2974,gox,JW2946,yghM;locus_tag=b2979 NC_000913.3 RefSeq CDS 3126522 3128021 . - 0 ID=cds2932;Parent=gene3042;Dbxref=ASAP:ABE-0009773,UniProtKB/Swiss-Prot:P0AEP9,Genbank:NP_417453.1,EcoGene:EG12997,GeneID:947353;Name=NP_417453.1;Note=glycolate oxidase subunit D;gbkey=CDS;gene=glcD;product=glycolate oxidase subunit%2C FAD-linked;protein_id=NP_417453.1;transl_table=11 NC_000913.3 RefSeq gene 3128272 3129036 . + . ID=gene3043;Dbxref=EcoGene:EG12998,GeneID:947466;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;gene_synonym=ECK2975,JW2947,yghN;locus_tag=b2980 NC_000913.3 RefSeq CDS 3128272 3129036 . + 0 ID=cds2933;Parent=gene3043;Dbxref=ASAP:ABE-0009777,UniProtKB/Swiss-Prot:P0ACL5,Genbank:NP_417454.1,EcoGene:EG12998,GeneID:947466;Name=NP_417454.1;Note=transcriptional activator for glc operon;gbkey=CDS;gene=glcC;product=glycolate-inducible glc operon transcriptional repressor%3B autorepressor;protein_id=NP_417454.1;transl_table=11 NC_000913.3 RefSeq gene 3129043 3130143 . - . ID=gene3044;Dbxref=EcoGene:EG12999,GeneID:947701;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=pseudogene;gene_synonym=ECK2976,JW5848;locus_tag=b2981;pseudo=true NC_000913.3 RefSeq CDS 3129043 3130143 . - 0 ID=cds2934;Parent=gene3044;Dbxref=ASAP:ABE-0009779,UniProtKB/Swiss-Prot:Q46840,EcoGene:EG12999,GeneID:947701;Note=pseudogene%2C IS-interrupted;gbkey=CDS;gene=yghO;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 3130146 3131340 . + . ID=id376;gbkey=mobile_element NC_000913.3 RefSeq gene 3130178 3131194 . + . ID=gene3045;Dbxref=EcoGene:EG40008,GeneID:947516;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b2982 NC_000913.3 RefSeq CDS 3130178 3131194 . + 0 ID=cds2935;Parent=gene3045;Dbxref=ASAP:ABE-0009783,UniProtKB/Swiss-Prot:P0CE56,Genbank:NP_417456.1,EcoGene:EG40008,GeneID:947516;Name=NP_417456.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_417456.1;transl_table=11 NC_000913.3 RefSeq gene 3131341 3132408 . - . ID=gene3046;Dbxref=EcoGene:EG13001,GeneID:947716;Name=yghQ;gbkey=Gene;gene=yghQ;gene_biotype=protein_coding;gene_synonym=ECK2977,JW5490;locus_tag=b2983 NC_000913.3 RefSeq CDS 3131341 3132408 . - 0 ID=cds2936;Parent=gene3046;Dbxref=ASAP:ABE-0009786,UniProtKB/Swiss-Prot:Q46841,Genbank:YP_026192.1,EcoGene:EG13001,GeneID:947716;Name=YP_026192.1;gbkey=CDS;gene=yghQ;product=putative inner membrane polysaccharide flippase;protein_id=YP_026192.1;transl_table=11 NC_000913.3 RefSeq gene 3132454 3133212 . - . ID=gene3047;Dbxref=EcoGene:EG13002,GeneID:947310;Name=yghR;gbkey=Gene;gene=yghR;gene_biotype=protein_coding;gene_synonym=ECK2978,JW2952;locus_tag=b2984 NC_000913.3 RefSeq CDS 3132454 3133212 . - 0 ID=cds2937;Parent=gene3047;Dbxref=ASAP:ABE-0009789,UniProtKB/Swiss-Prot:P64572,Genbank:NP_417458.1,EcoGene:EG13002,GeneID:947310;Name=NP_417458.1;gbkey=CDS;gene=yghR;product=putative ATP-binding protein;protein_id=NP_417458.1;transl_table=11 NC_000913.3 RefSeq gene 3133244 3133957 . - . ID=gene3048;Dbxref=EcoGene:EG13003,GeneID:947476;Name=yghS;gbkey=Gene;gene=yghS;gene_biotype=protein_coding;gene_synonym=ECK2979,JW5491;locus_tag=b2985 NC_000913.3 RefSeq CDS 3133244 3133957 . - 0 ID=cds2938;Parent=gene3048;Dbxref=ASAP:ABE-0009793,UniProtKB/Swiss-Prot:Q46843,Genbank:NP_417459.1,EcoGene:EG13003,GeneID:947476;Name=NP_417459.1;gbkey=CDS;gene=yghS;product=putative ATP-binding protein;protein_id=NP_417459.1;transl_table=11 NC_000913.3 RefSeq gene 3134131 3134823 . + . ID=gene3049;Dbxref=EcoGene:EG13004,GeneID:947477;Name=yghT;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;gene_synonym=ECK2980,JW2954;locus_tag=b2986 NC_000913.3 RefSeq CDS 3134131 3134823 . + 0 ID=cds2939;Parent=gene3049;Dbxref=ASAP:ABE-0009798,UniProtKB/Swiss-Prot:Q46844,Genbank:NP_417460.1,EcoGene:EG13004,GeneID:947477;Name=NP_417460.1;gbkey=CDS;gene=yghT;product=putative ATP-binding protein;protein_id=NP_417460.1;transl_table=11 NC_000913.3 RefSeq gene 3134872 3136371 . - . ID=gene3050;Dbxref=EcoGene:EG12883,GeneID:947475;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;gene_synonym=ECK2981,JW2955;locus_tag=b2987 NC_000913.3 RefSeq CDS 3134872 3136371 . - 0 ID=cds2940;Parent=gene3050;Dbxref=ASAP:ABE-0009800,UniProtKB/Swiss-Prot:P43676,Genbank:NP_417461.1,EcoGene:EG12883,GeneID:947475;Name=NP_417461.1;Note=low-affinity phosphate transport;gbkey=CDS;gene=pitB;product=phosphate transporter;protein_id=NP_417461.1;transl_table=11 NC_000913.3 RefSeq gene 3136663 3138522 . - . ID=gene3051;Dbxref=EcoGene:EG12882,GeneID:947474;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;gene_synonym=ECK2982,gsp,JW2956;locus_tag=b2988 NC_000913.3 RefSeq CDS 3136663 3138522 . - 0 ID=cds2941;Parent=gene3051;Dbxref=ASAP:ABE-0009804,UniProtKB/Swiss-Prot:P0AES0,Genbank:NP_417462.1,EcoGene:EG12882,GeneID:947474;Name=NP_417462.1;Note=glutathionylspermidine synthetase/amidase;gbkey=CDS;gene=gss;product=glutathionylspermidine amidase and glutathionylspermidine synthetase;protein_id=NP_417462.1;transl_table=11 NC_000913.3 RefSeq gene 3138727 3139593 . + . ID=gene3052;Dbxref=EcoGene:EG13005,GeneID:947472;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;gene_synonym=ECK2983,JW5492;locus_tag=b2989 NC_000913.3 RefSeq CDS 3138727 3139593 . + 0 ID=cds2942;Parent=gene3052;Dbxref=ASAP:ABE-0009812,UniProtKB/Swiss-Prot:Q46845,Genbank:NP_417463.4,EcoGene:EG13005,GeneID:947472;Name=NP_417463.4;gbkey=CDS;gene=yghU;product=putative S-transferase;protein_id=NP_417463.4;transl_table=11 NC_000913.3 RefSeq repeat_region 3139621 3139703 . + . ID=id377;Note=REP221 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3139716 3139964 . - . ID=gene3053;Dbxref=EcoGene:EG11805,GeneID:948020;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;gene_synonym=ECK2984,JW2958;locus_tag=b2990 NC_000913.3 RefSeq CDS 3139716 3139964 . - 0 ID=cds2943;Parent=gene3053;Dbxref=ASAP:ABE-0009816,UniProtKB/Swiss-Prot:P0AAM7,Genbank:NP_417464.1,EcoGene:EG11805,GeneID:948020;Name=NP_417464.1;Note=hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2;gbkey=CDS;gene=hybG;product=hydrogenase 2 accessory protein;protein_id=NP_417464.1;transl_table=11 NC_000913.3 RefSeq gene 3139977 3140318 . - . ID=gene3054;Dbxref=EcoGene:EG11804,GeneID:948004;Name=hybF;gbkey=Gene;gene=hybF;gene_biotype=protein_coding;gene_synonym=ECK2985,JW5493;locus_tag=b2991 NC_000913.3 RefSeq CDS 3139977 3140318 . - 0 ID=cds2944;Parent=gene3054;Dbxref=ASAP:ABE-0009818,UniProtKB/Swiss-Prot:P0A703,Genbank:NP_417465.1,EcoGene:EG11804,GeneID:948004;Name=NP_417465.1;Note=may modulate levels of hydrogenease-2;gbkey=CDS;gene=hybF;product=protein involved with the maturation of hydrogenases 1 and 2;protein_id=NP_417465.1;transl_table=11 NC_000913.3 RefSeq gene 3140311 3140799 . - . ID=gene3055;Dbxref=EcoGene:EG11803,GeneID:947483;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;gene_synonym=ECK2986,JW2960;locus_tag=b2992 NC_000913.3 RefSeq CDS 3140311 3140799 . - 0 ID=cds2945;Parent=gene3055;Dbxref=ASAP:ABE-0009824,UniProtKB/Swiss-Prot:P0AAN1,Genbank:NP_417466.1,EcoGene:EG11803,GeneID:947483;Name=NP_417466.1;Note=member of hyb operon;gbkey=CDS;gene=hybE;product=hydrogenase 2-specific chaperone;protein_id=NP_417466.1;transl_table=11 NC_000913.3 RefSeq gene 3140792 3141286 . - . ID=gene3056;Dbxref=EcoGene:EG11802,GeneID:948982;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;gene_synonym=ECK2987,JW2961;locus_tag=b2993 NC_000913.3 RefSeq CDS 3140792 3141286 . - 0 ID=cds2946;Parent=gene3056;Dbxref=ASAP:ABE-0009826,UniProtKB/Swiss-Prot:P37182,Genbank:NP_417467.1,EcoGene:EG11802,GeneID:948982;Name=NP_417467.1;Note=probable processing element for hydrogenase-2;gbkey=CDS;gene=hybD;product=maturation protease for hydrogenase 2;protein_id=NP_417467.1;transl_table=11 NC_000913.3 RefSeq gene 3141286 3142989 . - . ID=gene3057;Dbxref=EcoGene:EG11801,GeneID:945182;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;gene_synonym=ECK2988,JW2962;locus_tag=b2994 NC_000913.3 RefSeq CDS 3141286 3142989 . - 0 ID=cds2947;Parent=gene3057;Dbxref=ASAP:ABE-0009828,UniProtKB/Swiss-Prot:P0ACE0,Genbank:NP_417468.1,EcoGene:EG11801,GeneID:945182;Name=NP_417468.1;Note=probable large subunit%2C hydrogenase-2;gbkey=CDS;gene=hybC;product=hydrogenase 2%2C large subunit;protein_id=NP_417468.1;transl_table=11 NC_000913.3 RefSeq gene 3142986 3144164 . - . ID=gene3058;Dbxref=EcoGene:EG11800,GeneID:948615;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;gene_synonym=ECK2989,JW5494;locus_tag=b2995 NC_000913.3 RefSeq CDS 3142986 3144164 . - 0 ID=cds2948;Parent=gene3058;Dbxref=ASAP:ABE-0009830,UniProtKB/Swiss-Prot:P37180,Genbank:NP_417469.1,EcoGene:EG11800,GeneID:948615;Name=NP_417469.1;Note=probable cytochrome Ni/Fe component of hydrogenase-2;gbkey=CDS;gene=hybB;product=putative hydrogenase 2 cytochrome b type component;protein_id=NP_417469.1;transl_table=11 NC_000913.3 RefSeq gene 3144154 3145140 . - . ID=gene3059;Dbxref=EcoGene:EG11799,GeneID:944842;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;gene_synonym=ECK2990,hydL,JW2964;locus_tag=b2996 NC_000913.3 RefSeq CDS 3144154 3145140 . - 0 ID=cds2949;Parent=gene3059;Dbxref=ASAP:ABE-0009832,UniProtKB/Swiss-Prot:P0AAJ8,Genbank:NP_417470.1,EcoGene:EG11799,GeneID:944842;Name=NP_417470.1;Note=hydrogenase-2 small subunit;gbkey=CDS;gene=hybA;product=hydrogenase 2 4Fe-4S ferredoxin-type component;protein_id=NP_417470.1;transl_table=11 NC_000913.3 RefSeq gene 3145143 3146261 . - . ID=gene3060;Dbxref=EcoGene:EG13006,GeneID:945902;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;gene_synonym=ECK2991,JW2965,yghV;locus_tag=b2997 NC_000913.3 RefSeq CDS 3145143 3146261 . - 0 ID=cds2950;Parent=gene3060;Dbxref=ASAP:ABE-0009834,UniProtKB/Swiss-Prot:P69741,Genbank:NP_417471.1,EcoGene:EG13006,GeneID:945902;Name=NP_417471.1;gbkey=CDS;gene=hybO;product=hydrogenase 2%2C small subunit;protein_id=NP_417471.1;transl_table=11 NC_000913.3 RefSeq gene 3146450 3146737 . - . ID=gene3061;Dbxref=EcoGene:EG13007,GeneID:947485;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;gene_synonym=ECK2992,JW2966;locus_tag=b2998 NC_000913.3 RefSeq CDS 3146450 3146737 . - 0 ID=cds2951;Parent=gene3061;Dbxref=ASAP:ABE-0009839,UniProtKB/Swiss-Prot:P64574,Genbank:NP_417472.1,EcoGene:EG13007,GeneID:947485;Name=NP_417472.1;gbkey=CDS;gene=yghW;product=DUF2623 family protein;protein_id=NP_417472.1;transl_table=11 NC_000913.3 RefSeq gene 3146856 3147691 . - . ID=gene3062;Dbxref=EcoGene:EG13008,GeneID:2847694;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=pseudogene;gene_synonym=ECK2993,JW5926,yghY;locus_tag=b4658;pseudo=true NC_000913.3 RefSeq CDS 3147272 3147691 . - 0 ID=cds2952;Parent=gene3062;Dbxref=ASAP:ABE-0009842,ASAP:ABE-0009844,UniProtKB/Swiss-Prot:Q7DFU6,EcoGene:EG13008,GeneID:2847694;Note=pseudogene%2C dienlactone hydrolase family;gbkey=CDS;gene=yghX;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3146856 3147272 . - 0 ID=cds2952;Parent=gene3062;Dbxref=ASAP:ABE-0009842,ASAP:ABE-0009844,UniProtKB/Swiss-Prot:Q7DFU6,EcoGene:EG13008,GeneID:2847694;Note=pseudogene%2C dienlactone hydrolase family;gbkey=CDS;gene=yghX;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3147897 3148937 . + . ID=gene3063;Dbxref=EcoGene:EG13010,GeneID:947480;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;gene_synonym=ECK2995,JW2970,mgrA,yghZ;locus_tag=b3001 NC_000913.3 RefSeq CDS 3147897 3148937 . + 0 ID=cds2953;Parent=gene3063;Dbxref=ASAP:ABE-0009848,UniProtKB/Swiss-Prot:Q46851,Genbank:NP_417474.1,EcoGene:EG13010,GeneID:947480;Name=NP_417474.1;Note=putative reductase;gbkey=CDS;gene=gpr;product=L-glyceraldehyde 3-phosphate reductase;protein_id=NP_417474.1;transl_table=11 NC_000913.3 RefSeq gene 3148977 3149471 . - . ID=gene3064;Dbxref=EcoGene:EG13011,GeneID:947479;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;gene_synonym=ECK2996,JW2971;locus_tag=b3002 NC_000913.3 RefSeq CDS 3148977 3149471 . - 0 ID=cds2954;Parent=gene3064;Dbxref=ASAP:ABE-0009850,UniProtKB/Swiss-Prot:P67244,Genbank:NP_417475.1,EcoGene:EG13011,GeneID:947479;Name=NP_417475.1;gbkey=CDS;gene=yqhA;product=UPF0114 family putative inner membrane protein;protein_id=NP_417475.1;transl_table=11 NC_000913.3 RefSeq gene 3149662 3150546 . + . ID=gene3065;Dbxref=EcoGene:EG11292,GeneID:947478;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;gene_synonym=ECK2997,JW2972;locus_tag=b3003 NC_000913.3 RefSeq CDS 3149662 3150546 . + 0 ID=cds2955;Parent=gene3065;Dbxref=ASAP:ABE-0009859,UniProtKB/Swiss-Prot:P0AG84,Genbank:NP_417476.1,EcoGene:EG11292,GeneID:947478;Name=NP_417476.1;Note=putative oxidoreductase;gbkey=CDS;gene=yghA;product=putative oxidoreductase;protein_id=NP_417476.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3150554 3150808 . + . ID=id378;Note=RIP222 (repetitive extragenic palindromic) element%3B contains 5 REP sequences and 2 IHF sites;gbkey=repeat_region NC_000913.3 RefSeq gene 3150818 3151243 . - . ID=gene3066;Dbxref=EcoGene:EG10272,GeneID:946345;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;gene_synonym=ECK2998,JW2973;locus_tag=b3005 NC_000913.3 RefSeq CDS 3150818 3151243 . - 0 ID=cds2956;Parent=gene3066;Dbxref=ASAP:ABE-0009866,UniProtKB/Swiss-Prot:P0ABV2,Genbank:NP_417478.1,EcoGene:EG10272,GeneID:946345;Name=NP_417478.1;Note=uptake of enterochelin%3B tonB-dependent uptake of B colicins;gbkey=CDS;gene=exbD;product=membrane spanning protein in TonB-ExbB-ExbD complex;protein_id=NP_417478.1;transl_table=11 NC_000913.3 RefSeq gene 3151250 3151984 . - . ID=gene3067;Dbxref=EcoGene:EG10271,GeneID:945420;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;gene_synonym=ECK2999,JW2974;locus_tag=b3006 NC_000913.3 RefSeq CDS 3151250 3151984 . - 0 ID=cds2957;Parent=gene3067;Dbxref=ASAP:ABE-0009869,UniProtKB/Swiss-Prot:P0ABU7,Genbank:NP_417479.1,EcoGene:EG10271,GeneID:945420;Name=NP_417479.1;Note=uptake of enterochelin%3B tonB-dependent uptake of B colicins;gbkey=CDS;gene=exbB;product=membrane spanning protein in TonB-ExbB-ExbD complex;protein_id=NP_417479.1;transl_table=11 NC_000913.3 RefSeq gene 3152236 3153423 . + . ID=gene3068;Dbxref=EcoGene:EG10583,GeneID:946240;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;gene_synonym=ECK3000,JW2975;locus_tag=b3008 NC_000913.3 RefSeq CDS 3152236 3153423 . + 0 ID=cds2958;Parent=gene3068;Dbxref=ASAP:ABE-0009878,UniProtKB/Swiss-Prot:P06721,Genbank:NP_417481.1,EcoGene:EG10583,GeneID:946240;Name=NP_417481.1;Note=cystathionine beta-lyase (beta-cystathionase);gbkey=CDS;gene=metC;product=cystathionine beta-lyase%2C PLP-dependent;protein_id=NP_417481.1;transl_table=11 NC_000913.3 RefSeq gene 3153563 3154222 . + . ID=gene3069;Dbxref=EcoGene:EG11824,GeneID:947490;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;gene_synonym=ECK3001,JW2976;locus_tag=b3009 NC_000913.3 RefSeq CDS 3153563 3154222 . + 0 ID=cds2959;Parent=gene3069;Dbxref=ASAP:ABE-0009882,UniProtKB/Swiss-Prot:P0AA60,Genbank:NP_417482.1,EcoGene:EG11824,GeneID:947490;Name=NP_417482.1;gbkey=CDS;gene=yghB;product=general envelope maintenance protein%3B DedA family inner membrane protein%3B putative multidrug efflux transporter;protein_id=NP_417482.1;transl_table=11 NC_000913.3 RefSeq gene 3154262 3155218 . - . ID=gene3070;Dbxref=EcoGene:EG13013,GeneID:947491;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;gene_synonym=ECK3002,JW5849;locus_tag=b3010 NC_000913.3 RefSeq CDS 3154262 3155218 . - 0 ID=cds2960;Parent=gene3070;Dbxref=ASAP:ABE-0009884,UniProtKB/Swiss-Prot:Q46855,Genbank:NP_417483.2,EcoGene:EG13013,GeneID:947491;Name=NP_417483.2;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=yqhC;product=transcriptional activator of yqhD;protein_id=NP_417483.2;transl_table=11 NC_000913.3 RefSeq gene 3155355 3156518 . + . ID=gene3071;Dbxref=EcoGene:EG13014,GeneID:947493;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;gene_synonym=ECK3003,JW2978;locus_tag=b3011 NC_000913.3 RefSeq CDS 3155355 3156518 . + 0 ID=cds2961;Parent=gene3071;Dbxref=ASAP:ABE-0009888,UniProtKB/Swiss-Prot:Q46856,Genbank:NP_417484.1,EcoGene:EG13014,GeneID:947493;Name=NP_417484.1;Note=putative oxidoreductase;gbkey=CDS;gene=yqhD;product=aldehyde reductase%2C NADPH-dependent;protein_id=NP_417484.1;transl_table=11 NC_000913.3 RefSeq gene 3156623 3157450 . + . ID=gene3072;Dbxref=EcoGene:EG13015,GeneID:947495;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;gene_synonym=ECK3004,JW5499,yqhE;locus_tag=b3012 NC_000913.3 RefSeq CDS 3156623 3157450 . + 0 ID=cds2962;Parent=gene3072;Dbxref=ASAP:ABE-0009892,UniProtKB/Swiss-Prot:Q46857,Genbank:NP_417485.4,EcoGene:EG13015,GeneID:947495;Name=NP_417485.4;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconate reductase A;protein_id=NP_417485.4;transl_table=11 NC_000913.3 RefSeq gene 3157650 3158576 . + . ID=gene3073;Dbxref=EcoGene:EG13017,GeneID:945919;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;gene_synonym=ECK3005,JW5500,yqhF;locus_tag=b3013 NC_000913.3 RefSeq CDS 3157650 3158576 . + 0 ID=cds2963;Parent=gene3073;Dbxref=ASAP:ABE-0009895,UniProtKB/Swiss-Prot:Q46858,Genbank:YP_026195.1,EcoGene:EG13017,GeneID:945919;Name=YP_026195.1;gbkey=CDS;gene=yqhG;product=DUF3828 family putative periplasmic protein;protein_id=YP_026195.1;transl_table=11 NC_000913.3 RefSeq gene 3158627 3158884 . + . ID=gene3074;Dbxref=EcoGene:EG13018,GeneID:946832;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;gene_synonym=ECK3006,JW2982;locus_tag=b3014 NC_000913.3 RefSeq CDS 3158627 3158884 . + 0 ID=cds2964;Parent=gene3074;Dbxref=ASAP:ABE-0009898,UniProtKB/Swiss-Prot:P65298,Genbank:NP_417487.1,EcoGene:EG13018,GeneID:946832;Name=NP_417487.1;gbkey=CDS;gene=yqhH;product=outer membrane lipoprotein%2C Lpp paralog;protein_id=NP_417487.1;transl_table=11 NC_000913.3 RefSeq gene 3158927 3161146 . - . ID=gene3075;Dbxref=EcoGene:EG13019,GeneID:948963;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;gene_synonym=ECK3007,JW5501,ygiR;locus_tag=b4469 NC_000913.3 RefSeq CDS 3158927 3161146 . - 0 ID=cds2965;Parent=gene3075;Dbxref=ASAP:ABE-0174099,UniProtKB/Swiss-Prot:Q46861,Genbank:YP_026196.1,EcoGene:EG13019,GeneID:948963;Name=YP_026196.1;gbkey=CDS;gene=ygiQ;product=Radical SAM superfamily protein;protein_id=YP_026196.1;transl_table=11 NC_000913.3 RefSeq gene 3161257 3162669 . - . ID=gene3076;Dbxref=EcoGene:EG11376,GeneID:944982;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;gene_synonym=ECK3008,JW2985,sufI,sui,ygiJ;locus_tag=b3017 NC_000913.3 RefSeq CDS 3161257 3162669 . - 0 ID=cds2966;Parent=gene3076;Dbxref=ASAP:ABE-0009905,UniProtKB/Swiss-Prot:P26648,Genbank:NP_417489.1,EcoGene:EG11376,GeneID:944982;Name=NP_417489.1;Note=suppressor of ftsI;gbkey=CDS;gene=ftsP;product=septal ring component that protects the divisome from stress%3B multicopy suppressor of ftsI(Ts);protein_id=NP_417489.1;transl_table=11 NC_000913.3 RefSeq gene 3162744 3163481 . - . ID=gene3077;Dbxref=EcoGene:EG11377,GeneID:947496;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=ECK3009,JW2986,parF;locus_tag=b3018 NC_000913.3 RefSeq CDS 3162744 3163481 . - 0 ID=cds2967;Parent=gene3077;Dbxref=ASAP:ABE-0009910,UniProtKB/Swiss-Prot:P26647,Genbank:NP_417490.1,EcoGene:EG11377,GeneID:947496;Name=NP_417490.1;gbkey=CDS;gene=plsC;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=NP_417490.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3163644 3163673 . + . ID=id379;Note=REP223 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3163715 3165973 . - . ID=gene3078;Dbxref=EcoGene:EG10686,GeneID:947499;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;gene_synonym=ECK3010,JW2987;locus_tag=b3019 NC_000913.3 RefSeq CDS 3163715 3165973 . - 0 ID=cds2968;Parent=gene3078;Dbxref=ASAP:ABE-0009916,UniProtKB/Swiss-Prot:P0AFI2,Genbank:NP_417491.1,EcoGene:EG10686,GeneID:947499;Name=NP_417491.1;Note=DNA topoisomerase IV subunit A;gbkey=CDS;gene=parC;product=DNA topoisomerase IV%2C subunit A;protein_id=NP_417491.1;transl_table=11 NC_000913.3 RefSeq gene 3166111 3167718 . - . ID=gene3079;Dbxref=EcoGene:EG13021,GeneID:947140;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=protein_coding;gene_synonym=ECK3011,JW2988;locus_tag=b3020 NC_000913.3 RefSeq CDS 3166111 3167718 . - 0 ID=cds2969;Parent=gene3079;Dbxref=ASAP:ABE-0009920,UniProtKB/Swiss-Prot:Q46863,Genbank:NP_417492.1,EcoGene:EG13021,GeneID:947140;Name=NP_417492.1;Note=putative transport periplasmic protein;gbkey=CDS;gene=ygiS;product=putative ABC transporter permease;protein_id=NP_417492.1;transl_table=11 NC_000913.3 RefSeq gene 3167851 3168246 . - . ID=gene3080;Dbxref=EcoGene:EG13022,GeneID:945814;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;gene_synonym=ECK3012,JW2989,ygiT;locus_tag=b3021 NC_000913.3 RefSeq CDS 3167851 3168246 . - 0 ID=cds2970;Parent=gene3080;Dbxref=ASAP:ABE-0009923,UniProtKB/Swiss-Prot:Q46864,Genbank:NP_417493.1,EcoGene:EG13022,GeneID:945814;Name=NP_417493.1;gbkey=CDS;gene=mqsA;product=antitoxin for MqsR toxin%3B transcriptional repressor;protein_id=NP_417493.1;transl_table=11 NC_000913.3 RefSeq gene 3168248 3168544 . - . ID=gene3081;Dbxref=EcoGene:EG13023,GeneID:947500;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;gene_synonym=ECK3013,JW2990,ygiU;locus_tag=b3022 NC_000913.3 RefSeq CDS 3168248 3168544 . - 0 ID=cds2971;Parent=gene3081;Dbxref=ASAP:ABE-0009925,UniProtKB/Swiss-Prot:Q46865,Genbank:NP_417494.1,EcoGene:EG13023,GeneID:947500;Name=NP_417494.1;gbkey=CDS;gene=mqsR;product=GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system%3B biofilm/motility regulator%3B anti-repressor;protein_id=NP_417494.1;transl_table=11 NC_000913.3 RefSeq gene 3168749 3169231 . - . ID=gene3082;Dbxref=EcoGene:EG13024,GeneID:945805;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;gene_synonym=ECK3014,JW5502;locus_tag=b3023 NC_000913.3 RefSeq CDS 3168749 3169231 . - 0 ID=cds2972;Parent=gene3082;Dbxref=ASAP:ABE-0009928,UniProtKB/Swiss-Prot:Q46866,Genbank:YP_026197.1,EcoGene:EG13024,GeneID:945805;Name=YP_026197.1;gbkey=CDS;gene=ygiV;product=transcriptional repressor for mcbR biofilm gene;protein_id=YP_026197.1;transl_table=11 NC_000913.3 RefSeq gene 3169284 3169676 . - . ID=gene3083;Dbxref=EcoGene:EG13025,GeneID:946051;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;gene_synonym=ECK3015,JW2992;locus_tag=b3024 NC_000913.3 RefSeq CDS 3169284 3169676 . - 0 ID=cds2973;Parent=gene3083;Dbxref=ASAP:ABE-0009930,UniProtKB/Swiss-Prot:P0ADU5,Genbank:NP_417496.1,EcoGene:EG13025,GeneID:946051;Name=NP_417496.1;gbkey=CDS;gene=ygiW;product=hydrogen peroxide and cadmium resistance periplasmic protein%3B stress-induced OB-fold protein;protein_id=NP_417496.1;transl_table=11 NC_000913.3 RefSeq gene 3169828 3170487 . + . ID=gene3084;Dbxref=EcoGene:EG13026,GeneID:945369;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;gene_synonym=ECK3016,JW2993,preA,ygiX;locus_tag=b3025 NC_000913.3 RefSeq CDS 3169828 3170487 . + 0 ID=cds2974;Parent=gene3084;Dbxref=ASAP:ABE-0009936,UniProtKB/Swiss-Prot:P52076,Genbank:NP_417497.1,EcoGene:EG13026,GeneID:945369;Name=NP_417497.1;Note=putative 2-component transcriptional regulator;gbkey=CDS;gene=qseB;product=quorum sensing DNA-binding response regulator in two-component regulatory system with QseC;protein_id=NP_417497.1;transl_table=11 NC_000913.3 RefSeq gene 3170484 3171833 . + . ID=gene3085;Dbxref=EcoGene:EG13027,GeneID:947174;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;gene_synonym=ECK3017,JW2994,preB,ygiY;locus_tag=b3026 NC_000913.3 RefSeq CDS 3170484 3171833 . + 0 ID=cds2975;Parent=gene3085;Dbxref=ASAP:ABE-0009938,UniProtKB/Swiss-Prot:P40719,Genbank:NP_417498.1,EcoGene:EG13027,GeneID:947174;Name=NP_417498.1;Note=putative 2-component sensor protein;gbkey=CDS;gene=qseC;product=quorum sensing sensory histidine kinase in two-component regulatory system with QseB;protein_id=NP_417498.1;transl_table=11 NC_000913.3 RefSeq gene 3171879 3172211 . - . ID=gene3086;Dbxref=EcoGene:EG13028,GeneID:946450;Name=ygiZ;gbkey=Gene;gene=ygiZ;gene_biotype=protein_coding;gene_synonym=ECK3018,JW2995;locus_tag=b3027 NC_000913.3 RefSeq CDS 3171879 3172211 . - 0 ID=cds2976;Parent=gene3086;Dbxref=ASAP:ABE-0009940,UniProtKB/Swiss-Prot:Q46867,Genbank:NP_417499.1,EcoGene:EG13028,GeneID:946450;Name=NP_417499.1;gbkey=CDS;gene=ygiZ;product=inner membrane protein;protein_id=NP_417499.1;transl_table=11 NC_000913.3 RefSeq gene 3172530 3173111 . + . ID=gene3087;Dbxref=EcoGene:EG12656,GeneID:947512;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;gene_synonym=ECK3019,JW2996,mda66;locus_tag=b3028 NC_000913.3 RefSeq CDS 3172530 3173111 . + 0 ID=cds2977;Parent=gene3087;Dbxref=ASAP:ABE-0009946,UniProtKB/Swiss-Prot:P0AEY5,Genbank:NP_417500.1,EcoGene:EG12656,GeneID:947512;Name=NP_417500.1;Note=modulator of drug activity B;gbkey=CDS;gene=mdaB;product=NADPH quinone reductase;protein_id=NP_417500.1;transl_table=11 NC_000913.3 RefSeq gene 3173142 3173456 . + . ID=gene3088;Dbxref=EcoGene:EG12657,GeneID:947506;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;gene_synonym=ECK3020,JW2997;locus_tag=b3029 NC_000913.3 RefSeq CDS 3173142 3173456 . + 0 ID=cds2978;Parent=gene3088;Dbxref=ASAP:ABE-0009948,UniProtKB/Swiss-Prot:P0ADU2,Genbank:NP_417501.1,EcoGene:EG12657,GeneID:947506;Name=NP_417501.1;gbkey=CDS;gene=ygiN;product=quinol monooxygenase;protein_id=NP_417501.1;transl_table=11 NC_000913.3 RefSeq gene 3173504 3175396 . - . ID=gene3089;Dbxref=EcoGene:EG10687,GeneID:947501;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;gene_synonym=ECK3021,JW2998,nfxD;locus_tag=b3030 NC_000913.3 RefSeq CDS 3173504 3175396 . - 0 ID=cds2979;Parent=gene3089;Dbxref=ASAP:ABE-0009950,UniProtKB/Swiss-Prot:P20083,Genbank:NP_417502.1,EcoGene:EG10687,GeneID:947501;Name=NP_417502.1;Note=DNA topoisomerase IV subunit B;gbkey=CDS;gene=parE;product=DNA topoisomerase IV%2C subunit B;protein_id=NP_417502.1;transl_table=11 NC_000913.3 RefSeq gene 3175425 3176006 . - . ID=gene3090;Dbxref=EcoGene:EG12186,GeneID:947488;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;gene_synonym=ECK3022,JW2999,yzzI;locus_tag=b3031 NC_000913.3 RefSeq CDS 3175425 3176006 . - 0 ID=cds2980;Parent=gene3090;Dbxref=ASAP:ABE-0009953,UniProtKB/Swiss-Prot:P0A8Z7,Genbank:NP_417503.1,EcoGene:EG12186,GeneID:947488;Name=NP_417503.1;gbkey=CDS;gene=yqiA;product=acyl CoA esterase;protein_id=NP_417503.1;transl_table=11 NC_000913.3 RefSeq gene 3176006 3176833 . - . ID=gene3091;Dbxref=EcoGene:EG12187,GeneID:947515;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;gene_synonym=ECK3023,icc,JW3000;locus_tag=b3032 NC_000913.3 RefSeq CDS 3176006 3176833 . - 0 ID=cds2981;Parent=gene3091;Dbxref=ASAP:ABE-0009957,UniProtKB/Swiss-Prot:P0AEW4,Genbank:NP_417504.1,EcoGene:EG12187,GeneID:947515;Name=NP_417504.1;gbkey=CDS;gene=cpdA;product=3'%2C5' cAMP phosphodiesterase;protein_id=NP_417504.1;transl_table=11 NC_000913.3 RefSeq gene 3176858 3177280 . - . ID=gene3092;Dbxref=EcoGene:EG12185,GeneID:947518;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;gene_synonym=ECK3024,JW3001,yzzH;locus_tag=b3033 NC_000913.3 RefSeq CDS 3176858 3177280 . - 0 ID=cds2982;Parent=gene3092;Dbxref=ASAP:ABE-0009959,UniProtKB/Swiss-Prot:P0ADU7,Genbank:NP_417505.1,EcoGene:EG12185,GeneID:947518;Name=NP_417505.1;Note=putative enzyme;gbkey=CDS;gene=yqiB;product=DUF1249 protein YqiB;protein_id=NP_417505.1;transl_table=11 NC_000913.3 RefSeq gene 3177281 3177910 . - . ID=gene3093;Dbxref=EcoGene:EG12184,GeneID:947519;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;gene_synonym=adpP,aspP,ECK3025,JW3002,rdsA,trgB,yqiE,yzzG;locus_tag=b3034 NC_000913.3 RefSeq CDS 3177281 3177910 . - 0 ID=cds2983;Parent=gene3093;Dbxref=ASAP:ABE-0009961,UniProtKB/Swiss-Prot:Q93K97,Genbank:NP_417506.1,EcoGene:EG12184,GeneID:947519;Name=NP_417506.1;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=NP_417506.1;transl_table=11 NC_000913.3 RefSeq gene 3178115 3179596 . + . ID=gene3094;Dbxref=EcoGene:EG11009,GeneID:947521;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;gene_synonym=colE1-i,ECK3026,JW5503,mtcB,mukA,refI,toc,weeA;locus_tag=b3035 NC_000913.3 RefSeq CDS 3178115 3179596 . + 0 ID=cds2984;Parent=gene3094;Dbxref=ASAP:ABE-0009965,UniProtKB/Swiss-Prot:P02930,Genbank:NP_417507.2,EcoGene:EG11009,GeneID:947521;Name=NP_417507.2;Note=outer membrane channel%3B specific tolerance to colicin E1%3B segregation of daughter chromosomes;gbkey=CDS;gene=tolC;product=transport channel;protein_id=NP_417507.2;transl_table=11 NC_000913.3 RefSeq gene 3179744 3180415 . + . ID=gene3095;Dbxref=EcoGene:EG11164,GeneID:945086;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;gene_synonym=ECK3028,JW5927;locus_tag=b3037 NC_000913.3 RefSeq CDS 3179744 3180415 . + 0 ID=cds2985;Parent=gene3095;Dbxref=ASAP:ABE-0009969,UniProtKB/Swiss-Prot:P0ADT2,Genbank:NP_417509.3,EcoGene:EG11164,GeneID:945086;Name=NP_417509.3;gbkey=CDS;gene=ygiB;product=DUF1190 family protein;protein_id=NP_417509.3;transl_table=11 NC_000913.3 RefSeq gene 3180421 3181581 . + . ID=gene3096;Dbxref=EcoGene:EG11165,GeneID:947249;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;gene_synonym=ECK3029,JW3006;locus_tag=b3038 NC_000913.3 RefSeq CDS 3180421 3181581 . + 0 ID=cds2986;Parent=gene3096;Dbxref=ASAP:ABE-0009971,UniProtKB/Swiss-Prot:P0ADT5,Genbank:NP_417510.1,EcoGene:EG11165,GeneID:947249;Name=NP_417510.1;Note=putative synthetase/amidase;gbkey=CDS;gene=ygiC;product=ATP-Grasp family ATPase;protein_id=NP_417510.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3181590 3181613 . + . ID=id380;Note=REP224 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3181619 3182407 . - . ID=gene3097;Dbxref=EcoGene:EG11166,GeneID:946447;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;gene_synonym=ECK3030,JW3007;locus_tag=b3039 NC_000913.3 RefSeq CDS 3181619 3182407 . - 0 ID=cds2987;Parent=gene3097;Dbxref=ASAP:ABE-0009973,UniProtKB/Swiss-Prot:P24197,Genbank:NP_417511.2,EcoGene:EG11166,GeneID:946447;Name=NP_417511.2;gbkey=CDS;gene=ygiD;product=4%2C5- DOPA-extradiol-dioxygenase;protein_id=NP_417511.2;transl_table=11 NC_000913.3 RefSeq gene 3182550 3183323 . + . ID=gene3098;Dbxref=EcoGene:EG11167,GeneID:947035;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;gene_synonym=ECK3031,JW3008,ygiE;locus_tag=b3040 NC_000913.3 RefSeq CDS 3182550 3183323 . + 0 ID=cds2988;Parent=gene3098;Dbxref=ASAP:ABE-0009977,UniProtKB/Swiss-Prot:P0A8H3,Genbank:NP_417512.1,EcoGene:EG11167,GeneID:947035;Name=NP_417512.1;gbkey=CDS;gene=zupT;product=zinc transporter;protein_id=NP_417512.1;transl_table=11 NC_000913.3 RefSeq gene 3183813 3184466 . - . ID=gene3099;Dbxref=EcoGene:EG10465,GeneID:947526;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;gene_synonym=ECK3032,htrP,JW3009,luxH;locus_tag=b3041 NC_000913.3 RefSeq CDS 3183813 3184466 . - 0 ID=cds2989;Parent=gene3099;Dbxref=ASAP:ABE-0009980,UniProtKB/Swiss-Prot:P0A7J0,Genbank:NP_417513.1,EcoGene:EG10465,GeneID:947526;Name=NP_417513.1;Note=3%2C4 dihydroxy-2-butanone-4-phosphate synthase;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=NP_417513.1;transl_table=11 NC_000913.3 RefSeq gene 3184840 3185130 . + . ID=gene3100;Dbxref=EcoGene:EG13031,GeneID:947524;Name=yqiC;gbkey=Gene;gene=yqiC;gene_biotype=protein_coding;gene_synonym=ECK3033,JW5505;locus_tag=b3042 NC_000913.3 RefSeq CDS 3184840 3185130 . + 0 ID=cds2990;Parent=gene3100;Dbxref=ASAP:ABE-0009987,UniProtKB/Swiss-Prot:Q46868,Genbank:NP_417514.4,EcoGene:EG13031,GeneID:947524;Name=NP_417514.4;gbkey=CDS;gene=yqiC;product=BMFP family putative fusogenic protein;protein_id=NP_417514.4;transl_table=11 NC_000913.3 RefSeq gene 3185414 3185965 . + . ID=gene3101;Dbxref=EcoGene:EG12363,GeneID:947522;Name=ygiL;gbkey=Gene;gene=ygiL;gene_biotype=protein_coding;gene_synonym=ECK3034,JW3011;locus_tag=b3043 NC_000913.3 RefSeq CDS 3185414 3185965 . + 0 ID=cds2991;Parent=gene3101;Dbxref=ASAP:ABE-0009992,UniProtKB/Swiss-Prot:P39834,Genbank:NP_417515.1,EcoGene:EG12363,GeneID:947522;Name=NP_417515.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=ygiL;product=putative fimbrial-like adhesin protein;protein_id=NP_417515.1;transl_table=11 NC_000913.3 RefSeq gene 3186061 3186090 . + . ID=gene3102;Dbxref=EcoGene:EG14228,GeneID:947529;Name=yqiG;gbkey=Gene;gene=yqiG;gene_biotype=pseudogene;gene_synonym=ECK3035,JW5507;locus_tag=b3046;part=1/2;pseudo=true NC_000913.3 RefSeq gene 3187427 3189865 . + . ID=gene3102;Dbxref=EcoGene:EG14228,GeneID:947529;Name=yqiG;gbkey=Gene;gene=yqiG;gene_biotype=pseudogene;gene_synonym=ECK3035,JW5507;locus_tag=b3046;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 3186061 3186090 . + 0 ID=cds2992;Parent=gene3102;Dbxref=ASAP:ABE-0010001,UniProtKB/Swiss-Prot:P76655,EcoGene:EG14228,GeneID:947529;Note=pseudogene%3B fimbrial export usher family%3Bputative membrane%3B Not classified~putative membrane protein;gbkey=CDS;gene=yqiG;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3187427 3189865 . + 0 ID=cds2992;Parent=gene3102;Dbxref=ASAP:ABE-0010001,UniProtKB/Swiss-Prot:P76655,EcoGene:EG14228,GeneID:947529;Note=pseudogene%3B fimbrial export usher family%3Bputative membrane%3B Not classified~putative membrane protein;gbkey=CDS;gene=yqiG;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 3186096 3187426 . + . ID=id381;gbkey=mobile_element NC_000913.3 RefSeq gene 3186187 3186552 . + . ID=gene3103;Dbxref=EcoGene:EG40003,GeneID:947520;Name=insC1;gbkey=Gene;gene=insC1;gene_biotype=protein_coding;gene_synonym=ECK0357;locus_tag=b3044 NC_000913.3 RefSeq CDS 3186187 3186552 . + 0 ID=cds2993;Parent=gene3103;Dbxref=ASAP:ABE-0009997,UniProtKB/Swiss-Prot:P0CF44,Genbank:NP_417516.3,EcoGene:EG40003,GeneID:947520;Name=NP_417516.3;gbkey=CDS;gene=insC1;product=IS2 repressor TnpA;protein_id=NP_417516.3;transl_table=11 NC_000913.3 RefSeq gene 3186510 3187415 . + . ID=gene3104;Dbxref=EcoGene:EG40004,GeneID:947517;Name=insD1;gbkey=Gene;gene=insD1;gene_biotype=protein_coding;gene_synonym=ECK0358;locus_tag=b3045 NC_000913.3 RefSeq CDS 3186510 3187415 . + 0 ID=cds2994;Parent=gene3104;Dbxref=ASAP:ABE-0009999,UniProtKB/Swiss-Prot:P0CF57,Genbank:NP_417517.1,EcoGene:EG40004,GeneID:947517;Name=NP_417517.1;gbkey=CDS;gene=insD1;product=IS2 transposase TnpB;protein_id=NP_417517.1;transl_table=11 NC_000913.3 RefSeq gene 3189881 3190630 . + . ID=gene3105;Dbxref=EcoGene:EG14229,GeneID:947531;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;gene_synonym=ECK3036,JW5508;locus_tag=b3047 NC_000913.3 RefSeq CDS 3189881 3190630 . + 0 ID=cds2995;Parent=gene3105;Dbxref=ASAP:ABE-0010003,UniProtKB/Swiss-Prot:P77616,Genbank:NP_417519.4,EcoGene:EG14229,GeneID:947531;Name=NP_417519.4;Note=putative membrane protein;gbkey=CDS;gene=yqiH;product=putative periplasmic pilin chaperone;protein_id=NP_417519.4;transl_table=11 NC_000913.3 RefSeq gene 3190632 3191696 . + . ID=gene3106;Dbxref=EcoGene:EG14230,GeneID:947535;Name=yqiI;gbkey=Gene;gene=yqiI;gene_biotype=protein_coding;gene_synonym=ECK3037,JW5509;locus_tag=b3048 NC_000913.3 RefSeq CDS 3190632 3191696 . + 0 ID=cds2996;Parent=gene3106;Dbxref=ASAP:ABE-0010005,UniProtKB/Swiss-Prot:P76656,Genbank:NP_417520.1,EcoGene:EG14230,GeneID:947535;Name=NP_417520.1;gbkey=CDS;gene=yqiI;product=fimbrial protein;protein_id=NP_417520.1;transl_table=11 NC_000913.3 RefSeq gene 3191739 3191939 . - . ID=gene3107;Dbxref=EcoGene:EG11381,GeneID:947533;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;gene_synonym=ECK3038,JW3021,scoR;locus_tag=b3049 NC_000913.3 RefSeq CDS 3191739 3191939 . - 0 ID=cds2997;Parent=gene3107;Dbxref=ASAP:ABE-0010007,UniProtKB/Swiss-Prot:P26649,Genbank:NP_417521.1,EcoGene:EG11381,GeneID:947533;Name=NP_417521.1;Note=glycogen biosynthesis%2C rpoS dependent;gbkey=CDS;gene=glgS;product=motility and biofilm regulator;protein_id=NP_417521.1;transl_table=11 NC_000913.3 RefSeq gene 3192208 3192837 . + . ID=gene3108;Dbxref=EcoGene:EG14231,GeneID:947530;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;gene_synonym=ECK3039,JW3022;locus_tag=b3050 NC_000913.3 RefSeq CDS 3192208 3192837 . + 0 ID=cds2998;Parent=gene3108;Dbxref=ASAP:ABE-0010011,UniProtKB/Swiss-Prot:P76657,Genbank:NP_417522.1,EcoGene:EG14231,GeneID:947530;Name=NP_417522.1;Note=putative oxidoreductase;gbkey=CDS;gene=yqiJ;product=DUF1449 family inner membrane protein;protein_id=NP_417522.1;transl_table=11 NC_000913.3 RefSeq gene 3192864 3194525 . + . ID=gene3109;Dbxref=EcoGene:EG14232,GeneID:947537;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;gene_synonym=ECK3040,JW3023;locus_tag=b3051 NC_000913.3 RefSeq CDS 3192864 3194525 . + 0 ID=cds2999;Parent=gene3109;Dbxref=ASAP:ABE-0010013,UniProtKB/Swiss-Prot:P77306,Genbank:NP_417523.1,EcoGene:EG14232,GeneID:947537;Name=NP_417523.1;Note=putative membrane protein;gbkey=CDS;gene=yqiK;product=PHB family membrane protein%2C function unknown;protein_id=NP_417523.1;transl_table=11 NC_000913.3 RefSeq gene 3194723 3194865 . - . ID=gene3110;Dbxref=EcoGene:EG31160,GeneID:2847684;Name=sibD;gbkey=Gene;gene=sibD;gene_biotype=antisense_RNA;gene_synonym=C0730,ECK3041,IS156,JWR0251,QUAD1d,rygD,tp8;locus_tag=b4447 NC_000913.3 RefSeq ncRNA 3194723 3194865 . - . ID=rna109;Parent=gene3110;Dbxref=ASAP:ABE-0047267,EcoGene:EG31160,GeneID:2847684;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibD;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsD protein NC_000913.3 RefSeq exon 3194723 3194865 . - . ID=id382;Parent=rna109;Dbxref=ASAP:ABE-0047267,EcoGene:EG31160,GeneID:2847684;Note=identified in a large scale screen;gbkey=ncRNA;gene=sibD;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsD protein NC_000913.3 RefSeq gene 3194766 3194825 . + . ID=gene3111;Dbxref=EcoGene:EG14469,GeneID:7751628;Name=ibsD;gbkey=Gene;gene=ibsD;gene_biotype=protein_coding;gene_synonym=ECK4479;locus_tag=b4664 NC_000913.3 RefSeq CDS 3194766 3194825 . + 0 ID=cds3000;Parent=gene3111;Dbxref=UniProtKB/Swiss-Prot:C1P616,Genbank:YP_002791256.1,EcoGene:EG14469,GeneID:7751628;Name=YP_002791256.1;gbkey=CDS;gene=ibsD;product=toxic membrane protein;protein_id=YP_002791256.1;transl_table=11 NC_000913.3 RefSeq gene 3195099 3195240 . - . ID=gene3112;Dbxref=EcoGene:EG31169,GeneID:5061520;Name=sibE;gbkey=Gene;gene=sibE;gene_biotype=antisense_RNA;gene_synonym=ECK4420,QUAD1e,rygE;locus_tag=b4611 NC_000913.3 RefSeq ncRNA 3195099 3195240 . - . ID=rna110;Parent=gene3112;Dbxref=EcoGene:EG31169,GeneID:5061520;gbkey=ncRNA;gene=sibE;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsE protein NC_000913.3 RefSeq exon 3195099 3195240 . - . ID=id383;Parent=rna110;Dbxref=EcoGene:EG31169,GeneID:5061520;gbkey=ncRNA;gene=sibE;ncrna_class=antisense_RNA;product=sRNA antisense regulator of toxic IbsE protein NC_000913.3 RefSeq gene 3195141 3195200 . + . ID=gene3113;Dbxref=EcoGene:EG14471,GeneID:7751629;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;gene_synonym=ECK4481;locus_tag=b4666 NC_000913.3 RefSeq CDS 3195141 3195200 . + 0 ID=cds3001;Parent=gene3113;Dbxref=UniProtKB/Swiss-Prot:C1P617,Genbank:YP_002791257.1,EcoGene:EG14471,GeneID:7751629;Name=YP_002791257.1;gbkey=CDS;gene=ibsE;product=toxic membrane protein;protein_id=YP_002791257.1;transl_table=11 NC_000913.3 RefSeq gene 3195320 3196753 . - . ID=gene3114;Dbxref=EcoGene:EG13416,GeneID:947548;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;gene_synonym=ECK3042,gmhC,JW3024,rfaE,waaE,yqiF;locus_tag=b3052 NC_000913.3 RefSeq CDS 3195320 3196753 . - 0 ID=cds3002;Parent=gene3114;Dbxref=ASAP:ABE-0010015,UniProtKB/Swiss-Prot:P76658,Genbank:NP_417524.1,EcoGene:EG13416,GeneID:947548;Name=NP_417524.1;gbkey=CDS;gene=hldE;product=heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase;protein_id=NP_417524.1;transl_table=11 NC_000913.3 RefSeq gene 3196801 3199641 . - . ID=gene3115;Dbxref=EcoGene:EG11602,GeneID:947552;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;gene_synonym=ECK3043,JW3025;locus_tag=b3053 NC_000913.3 RefSeq CDS 3196801 3199641 . - 0 ID=cds3003;Parent=gene3115;Dbxref=ASAP:ABE-0010018,UniProtKB/Swiss-Prot:P30870,Genbank:NP_417525.1,EcoGene:EG11602,GeneID:947552;Name=NP_417525.1;Note=adenylylating enzyme for glutamine synthetase;gbkey=CDS;gene=glnE;product=fused deadenylyltransferase/adenylyltransferase for glutamine synthetase;protein_id=NP_417525.1;transl_table=11 NC_000913.3 RefSeq gene 3199664 3200965 . - . ID=gene3116;Dbxref=EcoGene:EG11603,GeneID:947554;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;gene_synonym=ECK3044,JW3026;locus_tag=b3054 NC_000913.3 RefSeq CDS 3199664 3200965 . - 0 ID=cds3004;Parent=gene3116;Dbxref=ASAP:ABE-0010020,UniProtKB/Swiss-Prot:P30871,Genbank:NP_417526.1,EcoGene:EG11603,GeneID:947554;Name=NP_417526.1;gbkey=CDS;gene=ygiF;product=inorganic triphosphatase;protein_id=NP_417526.1;transl_table=11 NC_000913.3 RefSeq gene 3201207 3201827 . + . ID=gene3117;Dbxref=EcoGene:EG12434,GeneID:947555;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;gene_synonym=ecfG,ECK3045,htrG,JW3027;locus_tag=b3055 NC_000913.3 RefSeq CDS 3201207 3201827 . + 0 ID=cds3005;Parent=gene3117;Dbxref=ASAP:ABE-0010028,UniProtKB/Swiss-Prot:P0ADT8,Genbank:NP_417527.1,EcoGene:EG12434,GeneID:947555;Name=NP_417527.1;gbkey=CDS;gene=ygiM;product=SH3 domain protein;protein_id=NP_417527.1;transl_table=11 NC_000913.3 RefSeq gene 3201891 3203129 . + . ID=gene3118;Dbxref=EcoGene:EG10136,GeneID:947553;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;gene_synonym=ECK3046,JW3028;locus_tag=b3056 NC_000913.3 RefSeq CDS 3201891 3203129 . + 0 ID=cds3006;Parent=gene3118;Dbxref=ASAP:ABE-0010031,UniProtKB/Swiss-Prot:P06961,Genbank:NP_417528.1,EcoGene:EG10136,GeneID:947553;Name=NP_417528.1;Note=tRNA nucleotidyl transferase;gbkey=CDS;gene=cca;product=fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase;protein_id=NP_417528.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3203144 3203268 . + . ID=id384;Note=REP225 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3203310 3204131 . - . ID=gene3119;Dbxref=EcoGene:EG11665,GeneID:947551;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;gene_synonym=ECK3047,JW3029,uppP;locus_tag=b3057 NC_000913.3 RefSeq CDS 3203310 3204131 . - 0 ID=cds3007;Parent=gene3119;Dbxref=ASAP:ABE-0010034,UniProtKB/Swiss-Prot:P60932,Genbank:NP_417529.1,EcoGene:EG11665,GeneID:947551;Name=NP_417529.1;Note=bacitracin resistance%3B possibly phosphorylates undecaprenol;gbkey=CDS;gene=bacA;product=undecaprenyl pyrophosphate phosphatase;protein_id=NP_417529.1;transl_table=11 NC_000913.3 RefSeq gene 3204221 3204589 . - . ID=gene3120;Dbxref=EcoGene:EG11673,GeneID:947544;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;gene_synonym=ECK3048,JW3030,ygiG;locus_tag=b3058 NC_000913.3 RefSeq CDS 3204221 3204589 . - 0 ID=cds3008;Parent=gene3120;Dbxref=ASAP:ABE-0010036,UniProtKB/Swiss-Prot:P0AC16,Genbank:NP_417530.2,EcoGene:EG11673,GeneID:947544;Name=NP_417530.2;Note=putative kinase;gbkey=CDS;gene=folB;product=dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase;protein_id=NP_417530.2;transl_table=11 NC_000913.3 RefSeq gene 3204694 3205311 . + . ID=gene3121;Dbxref=EcoGene:EG11674,GeneID:947561;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;gene_synonym=ECK3049,JW3031,ygiH;locus_tag=b3059 NC_000913.3 RefSeq CDS 3204694 3205311 . + 0 ID=cds3009;Parent=gene3121;Dbxref=ASAP:ABE-0010042,UniProtKB/Swiss-Prot:P60782,Genbank:NP_417531.1,EcoGene:EG11674,GeneID:947561;Name=NP_417531.1;gbkey=CDS;gene=plsY;product=putative glycerol-3-phosphate acyltransferase;protein_id=NP_417531.1;transl_table=11 NC_000913.3 RefSeq gene 3205324 3206256 . - . ID=gene3122;Dbxref=EcoGene:EG12694,GeneID:947562;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;gene_synonym=dan,ECK3050,JW3032,ygiP;locus_tag=b3060 NC_000913.3 RefSeq CDS 3205324 3206256 . - 0 ID=cds3010;Parent=gene3122;Dbxref=ASAP:ABE-0010045,UniProtKB/Swiss-Prot:P45463,Genbank:NP_417532.1,EcoGene:EG12694,GeneID:947562;Name=NP_417532.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=ttdR;product=transcriptional activator of ttdABT;protein_id=NP_417532.1;transl_table=11 NC_000913.3 RefSeq gene 3206463 3207374 . + . ID=gene3123;Dbxref=EcoGene:EG11168,GeneID:947565;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;gene_synonym=ECK3051,JW3033,ygjA;locus_tag=b3061 NC_000913.3 RefSeq CDS 3206463 3207374 . + 0 ID=cds3011;Parent=gene3123;Dbxref=ASAP:ABE-0010050,UniProtKB/Swiss-Prot:P05847,Genbank:NP_417533.1,EcoGene:EG11168,GeneID:947565;Name=NP_417533.1;Note=L-tartrate dehydratase%2C subunit A;gbkey=CDS;gene=ttdA;product=L-tartrate dehydratase%2C alpha subunit;protein_id=NP_417533.1;transl_table=11 NC_000913.3 RefSeq gene 3207371 3207976 . + . ID=gene3124;Dbxref=EcoGene:EG11169,GeneID:947568;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;gene_synonym=ECK3052,JW3034,ygjB;locus_tag=b3062 NC_000913.3 RefSeq CDS 3207371 3207976 . + 0 ID=cds3012;Parent=gene3124;Dbxref=ASAP:ABE-0010052,UniProtKB/Swiss-Prot:P0AC35,Genbank:NP_417534.1,EcoGene:EG11169,GeneID:947568;Name=NP_417534.1;Note=L-tartrate dehydratase%2C subunit B;gbkey=CDS;gene=ttdB;product=L-tartrate dehydratase%2C beta subunit;protein_id=NP_417534.1;transl_table=11 NC_000913.3 RefSeq gene 3208024 3209487 . + . ID=gene3125;Dbxref=EcoGene:EG12393,GeneID:947576;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;gene_synonym=ECK3053,JW3035,ygjC,ygjE;locus_tag=b3063 NC_000913.3 RefSeq CDS 3208024 3209487 . + 0 ID=cds3013;Parent=gene3125;Dbxref=ASAP:ABE-0010056,UniProtKB/Swiss-Prot:P39414,Genbank:NP_417535.1,EcoGene:EG12393,GeneID:947576;Name=NP_417535.1;gbkey=CDS;gene=ttdT;product=L-tartrate/succinate antiporte;protein_id=NP_417535.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3209499 3209518 . + . ID=id385;Note=REP226 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3209530 3210543 . - . ID=gene3126;Dbxref=EcoGene:EG11171,GeneID:947578;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;gene_synonym=ECK3054,gcp,JW3036,ygjD;locus_tag=b3064 NC_000913.3 RefSeq CDS 3209530 3210543 . - 0 ID=cds3014;Parent=gene3126;Dbxref=ASAP:ABE-0010058,UniProtKB/Swiss-Prot:P05852,Genbank:NP_417536.1,EcoGene:EG11171,GeneID:947578;Name=NP_417536.1;Note=putative O-sialoglycoprotein endopeptidase;gbkey=CDS;gene=tsaD;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%3B glycation binding protein;protein_id=NP_417536.1;transl_table=11 NC_000913.3 RefSeq gene 3210781 3210996 . + . ID=gene3127;Dbxref=EcoGene:EG10920,GeneID:947577;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;gene_synonym=ECK3055,JW3037;locus_tag=b3065 NC_000913.3 RefSeq CDS 3210781 3210996 . + 0 ID=cds3015;Parent=gene3127;Dbxref=ASAP:ABE-0010063,UniProtKB/Swiss-Prot:P68679,Genbank:NP_417537.1,EcoGene:EG10920,GeneID:947577;Name=NP_417537.1;gbkey=CDS;gene=rpsU;product=30S ribosomal subunit protein S21;protein_id=NP_417537.1;transl_table=11 NC_000913.3 RefSeq gene 3211107 3212852 . + . ID=gene3128;Dbxref=EcoGene:EG10239,GeneID:947570;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;gene_synonym=dnaP,ECK3056,JW3038,parB,sdgA;locus_tag=b3066 NC_000913.3 RefSeq CDS 3211107 3212852 . + 0 ID=cds3016;Parent=gene3128;Dbxref=ASAP:ABE-0010065,UniProtKB/Swiss-Prot:P0ABS5,Genbank:NP_417538.1,EcoGene:EG10239,GeneID:947570;Name=NP_417538.1;Note=DNA biosynthesis%3B DNA primase;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=NP_417538.1;transl_table=11 NC_000913.3 RefSeq gene 3213047 3214888 . + . ID=gene3129;Dbxref=EcoGene:EG10896,GeneID:947567;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;gene_synonym=alt,ECK3057,JW3039;locus_tag=b3067 NC_000913.3 RefSeq CDS 3213047 3214888 . + 0 ID=cds3017;Parent=gene3129;Dbxref=ASAP:ABE-0010070,UniProtKB/Swiss-Prot:P00579,Genbank:NP_417539.1,EcoGene:EG10896,GeneID:947567;Name=NP_417539.1;Note=RNA polymerase%2C sigma(70) factor%3B regulation of proteins induced at high temperatures;gbkey=CDS;gene=rpoD;product=RNA polymerase%2C sigma 70 (sigma D) factor;protein_id=NP_417539.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3214892 3214924 . + . ID=id386;Note=REP227 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3214967 3215473 . - . ID=gene3130;Dbxref=EcoGene:EG12717,GeneID:947560;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;gene_synonym=dug,ECK3058,JW3040,ygjF;locus_tag=b3068 NC_000913.3 RefSeq CDS 3214967 3215473 . - 0 ID=cds3018;Parent=gene3130;Dbxref=ASAP:ABE-0010073,UniProtKB/Swiss-Prot:P0A9H1,Genbank:NP_417540.1,EcoGene:EG12717,GeneID:947560;Name=NP_417540.1;gbkey=CDS;gene=mug;product=G/U mismatch-specific DNA glycosylase%3B xanthine DNA glycosylase;protein_id=NP_417540.1;transl_table=11 NC_000913.3 RefSeq gene 3215598 3215673 . + . ID=gene3131;Dbxref=EcoGene:EG30046,GeneID:947558;Name=ileX;gbkey=Gene;gene=ileX;gene_biotype=tRNA;gene_synonym=ECK3059,JWR0069;locus_tag=b3069 NC_000913.3 RefSeq tRNA 3215598 3215673 . + . ID=rna111;Parent=gene3131;Dbxref=ASAP:ABE-0010076,EcoGene:EG30046,GeneID:947558;Note=anticodon: CAU;gbkey=tRNA;gene=ileX;product=tRNA-Ile NC_000913.3 RefSeq exon 3215598 3215673 . + . ID=id387;Parent=rna111;Dbxref=ASAP:ABE-0010076,EcoGene:EG30046,GeneID:947558;Note=anticodon: CAU;gbkey=tRNA;gene=ileX;product=tRNA-Ile NC_000913.3 RefSeq gene 3215727 3216491 . - . ID=gene3132;Dbxref=EcoGene:EG12953,GeneID:947582;Name=yqjH;gbkey=Gene;gene=yqjH;gene_biotype=protein_coding;gene_synonym=ECK3060,JW3041;locus_tag=b3070 NC_000913.3 RefSeq CDS 3215727 3216491 . - 0 ID=cds3019;Parent=gene3132;Dbxref=ASAP:ABE-0010079,UniProtKB/Swiss-Prot:Q46871,Genbank:NP_417541.1,EcoGene:EG12953,GeneID:947582;Name=NP_417541.1;gbkey=CDS;gene=yqjH;product=putative siderophore interacting protein;protein_id=NP_417541.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3216601 3216678 . + . ID=id388;Note=REP228 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3216779 3217402 . + . ID=gene3133;Dbxref=EcoGene:EG12954,GeneID:947584;Name=yqjI;gbkey=Gene;gene=yqjI;gene_biotype=protein_coding;gene_synonym=ECK3061,JW3042;locus_tag=b3071 NC_000913.3 RefSeq CDS 3216779 3217402 . + 0 ID=cds3020;Parent=gene3133;Dbxref=ASAP:ABE-0010084,UniProtKB/Swiss-Prot:P64588,Genbank:NP_417542.1,EcoGene:EG12954,GeneID:947584;Name=NP_417542.1;gbkey=CDS;gene=yqjI;product=PadR family putative transcriptional regulator;protein_id=NP_417542.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3217434 3217522 . + . ID=id389;Note=REP229 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3217556 3219076 . - . ID=gene3134;Dbxref=EcoGene:EG12955,GeneID:945301;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;gene_synonym=air,ECK3062,JW3043,yqjJ;locus_tag=b3072 NC_000913.3 RefSeq CDS 3217556 3219076 . - 0 ID=cds3021;Parent=gene3134;Dbxref=ASAP:ABE-0010087,UniProtKB/Swiss-Prot:P50466,Genbank:NP_417543.1,EcoGene:EG12955,GeneID:945301;Name=NP_417543.1;Note=aerotaxis sensor receptor%2C flavoprotein;gbkey=CDS;gene=aer;product=fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component;protein_id=NP_417543.1;transl_table=11 NC_000913.3 RefSeq gene 3219494 3220873 . + . ID=gene3135;Dbxref=EcoGene:EG12718,GeneID:947120;Name=patA;gbkey=Gene;gene=patA;gene_biotype=protein_coding;gene_synonym=ECK3063,JW5510,ygjG;locus_tag=b3073 NC_000913.3 RefSeq CDS 3219494 3220873 . + 0 ID=cds3022;Parent=gene3135;Dbxref=ASAP:ABE-0010092,UniProtKB/Swiss-Prot:P42588,Genbank:NP_417544.5,EcoGene:EG12718,GeneID:947120;Name=NP_417544.5;Note=probable ornithine aminotransferase;gbkey=CDS;gene=patA;product=putrescine:2-oxoglutaric acid aminotransferase%2C PLP-dependent;protein_id=NP_417544.5;transl_table=11 NC_000913.3 RefSeq repeat_region 3220880 3220910 . + . ID=id390;Note=REP230 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3220915 3221247 . - . ID=gene3136;Dbxref=EcoGene:EG12719,GeneID:946251;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;gene_synonym=ECK3064,JW3045;locus_tag=b3074 NC_000913.3 RefSeq CDS 3220915 3221247 . - 0 ID=cds3023;Parent=gene3136;Dbxref=ASAP:ABE-0010094,UniProtKB/Swiss-Prot:P42589,Genbank:NP_417545.1,EcoGene:EG12719,GeneID:946251;Name=NP_417545.1;Note=putative tRNA synthetase;gbkey=CDS;gene=ygjH;product=putative tRNA binding protein%3B putative tRNA corner chaperone;protein_id=NP_417545.1;transl_table=11 NC_000913.3 RefSeq gene 3221466 3222449 . + . ID=gene3137;Dbxref=EcoGene:EG10254,GeneID:947586;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;gene_synonym=ECK3065,JW3046;locus_tag=b3075 NC_000913.3 RefSeq CDS 3221466 3222449 . + 0 ID=cds3024;Parent=gene3137;Dbxref=ASAP:ABE-0010099,UniProtKB/Swiss-Prot:P06846,Genbank:NP_417546.1,EcoGene:EG10254,GeneID:947586;Name=NP_417546.1;Note=regulator of ebg operon;gbkey=CDS;gene=ebgR;product=transcriptional repressor;protein_id=NP_417546.1;transl_table=11 NC_000913.3 RefSeq gene 3222633 3225725 . + . ID=gene3138;Dbxref=EcoGene:EG10252,GeneID:947583;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;gene_synonym=ECK3066,JW5511;locus_tag=b3076 NC_000913.3 RefSeq CDS 3222633 3225725 . + 0 ID=cds3025;Parent=gene3138;Dbxref=ASAP:ABE-0010104,UniProtKB/Swiss-Prot:P06864,Genbank:YP_026199.1,EcoGene:EG10252,GeneID:947583;Name=YP_026199.1;Note=evolved beta-D-galactosidase%2C alpha subunit%3B cryptic gene;gbkey=CDS;gene=ebgA;product=evolved beta-D-galactosidase%2C alpha subunit;protein_id=YP_026199.1;transl_table=11 NC_000913.3 RefSeq gene 3225722 3226171 . + . ID=gene3139;Dbxref=EcoGene:EG10253,GeneID:947581;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;gene_synonym=ECK3067,JW3048;locus_tag=b3077 NC_000913.3 RefSeq CDS 3225722 3226171 . + 0 ID=cds3026;Parent=gene3139;Dbxref=ASAP:ABE-0010106,UniProtKB/Swiss-Prot:P0AC73,Genbank:NP_417548.1,EcoGene:EG10253,GeneID:947581;Name=NP_417548.1;Note=evolved beta-D-galactosidase%2C beta subunit%3B cryptic gene;gbkey=CDS;gene=ebgC;product=evolved beta-D-galactosidase%2C beta subunit%3B cupin superfamily;protein_id=NP_417548.1;transl_table=11 NC_000913.3 RefSeq gene 3226234 3227667 . + . ID=gene3140;Dbxref=EcoGene:EG12720,GeneID:947579;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;gene_synonym=ebgB,ECK3068,JW5512;locus_tag=b3078 NC_000913.3 RefSeq CDS 3226234 3227667 . + 0 ID=cds3027;Parent=gene3140;Dbxref=ASAP:ABE-0010110,UniProtKB/Swiss-Prot:P42590,Genbank:YP_026200.1,EcoGene:EG12720,GeneID:947579;Name=YP_026200.1;Note=putative oxidoreductase;gbkey=CDS;gene=ygjI;product=putative transporter;protein_id=YP_026200.1;transl_table=11 NC_000913.3 RefSeq gene 3227801 3228871 . + . ID=gene3141;Dbxref=EcoGene:EG12721,GeneID:947597;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;gene_synonym=ECK3069,JW3050;locus_tag=b3079 NC_000913.3 RefSeq CDS 3227801 3228871 . + 0 ID=cds3028;Parent=gene3141;Dbxref=ASAP:ABE-0010115,UniProtKB/Swiss-Prot:P42591,Genbank:NP_417550.1,EcoGene:EG12721,GeneID:947597;Name=NP_417550.1;gbkey=CDS;gene=ygjJ;product=putative periplasmic protein;protein_id=NP_417550.1;transl_table=11 NC_000913.3 RefSeq gene 3228888 3231239 . + . ID=gene3142;Dbxref=EcoGene:EG12722,GeneID:947596;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;gene_synonym=ECK3070,JW3051;locus_tag=b3080 NC_000913.3 RefSeq CDS 3228888 3231239 . + 0 ID=cds3029;Parent=gene3142;Dbxref=ASAP:ABE-0010118,UniProtKB/Swiss-Prot:P42592,Genbank:NP_417551.1,EcoGene:EG12722,GeneID:947596;Name=NP_417551.1;Note=putative isomerase;gbkey=CDS;gene=ygjK;product=alpha-glucosidase;protein_id=NP_417551.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3231252 3231534 . + . ID=id391;Note=REP231 (repetitive extragenic palindromic) element%3B contains 6 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3231665 3233683 . + . ID=gene3143;Dbxref=EcoGene:EG12723,GeneID:947594;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;gene_synonym=ECK3071,JW3052,ygjL;locus_tag=b3081 NC_000913.3 RefSeq CDS 3231665 3233683 . + 0 ID=cds3030;Parent=gene3143;Dbxref=ASAP:ABE-0010124,UniProtKB/Swiss-Prot:P42593,Genbank:NP_417552.1,EcoGene:EG12723,GeneID:947594;Name=NP_417552.1;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase%2C NADH and FMN-linked;protein_id=NP_417552.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3233699 3233719 . + . ID=id392;Note=REP232 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3233728 3234144 . - . ID=gene3144;Dbxref=EcoGene:EG12724,GeneID:947593;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;gene_synonym=ECK3072,JW3053,ygjM;locus_tag=b3082 NC_000913.3 RefSeq CDS 3233728 3234144 . - 0 ID=cds3031;Parent=gene3144;Dbxref=ASAP:ABE-0010126,UniProtKB/Swiss-Prot:P67701,Genbank:NP_417553.1,EcoGene:EG12724,GeneID:947593;Name=NP_417553.1;gbkey=CDS;gene=higA;product=antitoxinof the HigB-HigA toxin-antitoxin system;protein_id=NP_417553.1;transl_table=11 NC_000913.3 RefSeq gene 3234141 3234455 . - . ID=gene3145;Dbxref=EcoGene:EG12725,GeneID:947591;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;gene_synonym=ECK3073,JW3054,ygjN;locus_tag=b3083 NC_000913.3 RefSeq CDS 3234141 3234455 . - 0 ID=cds3032;Parent=gene3145;Dbxref=ASAP:ABE-0010128,UniProtKB/Swiss-Prot:P64578,Genbank:NP_417554.1,EcoGene:EG12725,GeneID:947591;Name=NP_417554.1;gbkey=CDS;gene=higB;product=mRNA interferase toxin of the HigB-HigA toxin-antitoxin system;protein_id=NP_417554.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3234638 3234723 . + . ID=id393;Note=REP233 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3234739 3235875 . - . ID=gene3146;Dbxref=EcoGene:EG12726,GeneID:947589;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;gene_synonym=ECK3074,JW5513,rsmD,ygjO;locus_tag=b3084 NC_000913.3 RefSeq CDS 3234739 3235875 . - 0 ID=cds3033;Parent=gene3146;Dbxref=ASAP:ABE-0010133,UniProtKB/Swiss-Prot:P42596,Genbank:NP_417555.4,EcoGene:EG12726,GeneID:947589;Name=NP_417555.4;Note=putative enzyme;gbkey=CDS;gene=rlmG;product=23S rRNA m(2)G1835 methyltransferase%2C SAM-dependent;protein_id=NP_417555.4;transl_table=11 NC_000913.3 RefSeq gene 3235960 3236463 . + . ID=gene3147;Dbxref=EcoGene:EG12727,GeneID:947650;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;gene_synonym=ECK3075,JW5514;locus_tag=b3085 NC_000913.3 RefSeq CDS 3235960 3236463 . + 0 ID=cds3034;Parent=gene3147;Dbxref=ASAP:ABE-0010138,UniProtKB/Swiss-Prot:P42597,Genbank:NP_417556.2,EcoGene:EG12727,GeneID:947650;Name=NP_417556.2;gbkey=CDS;gene=ygjP;product=putative metal dependent hydrolase;protein_id=NP_417556.2;transl_table=11 NC_000913.3 RefSeq gene 3236540 3237232 . + . ID=gene3148;Dbxref=EcoGene:EG12728,GeneID:947598;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;gene_synonym=ECK3076,JW3057;locus_tag=b3086 NC_000913.3 RefSeq CDS 3236540 3237232 . + 0 ID=cds3035;Parent=gene3148;Dbxref=ASAP:ABE-0010142,UniProtKB/Swiss-Prot:P42598,Genbank:NP_417557.1,EcoGene:EG12728,GeneID:947598;Name=NP_417557.1;gbkey=CDS;gene=ygjQ;product=DUF218 superfamily protein;protein_id=NP_417557.1;transl_table=11 NC_000913.3 RefSeq gene 3237311 3238297 . + . ID=gene3149;Dbxref=EcoGene:EG12729,GeneID:947600;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;gene_synonym=ECK3077,JW3058;locus_tag=b3087 NC_000913.3 RefSeq CDS 3237311 3238297 . + 0 ID=cds3036;Parent=gene3149;Dbxref=ASAP:ABE-0010148,UniProtKB/Swiss-Prot:P42599,Genbank:NP_417558.2,EcoGene:EG12729,GeneID:947600;Name=NP_417558.2;gbkey=CDS;gene=ygjR;product=putative NAD(P)-dependent dehydrogenase;protein_id=NP_417558.2;transl_table=11 NC_000913.3 RefSeq gene 3238580 3239545 . + . ID=gene3150;Dbxref=EcoGene:EG12731,GeneID:947607;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;gene_synonym=ECK3079,JW5515,ygjT;locus_tag=b3088 NC_000913.3 RefSeq CDS 3238580 3239545 . + 0 ID=cds3037;Parent=gene3150;Dbxref=ASAP:ABE-0010151,UniProtKB/Swiss-Prot:P42601,Genbank:YP_026201.1,EcoGene:EG12731,GeneID:947607;Name=YP_026201.1;Note=putative transport protein;gbkey=CDS;gene=alx;product=putative membrane-bound redox modulator;protein_id=YP_026201.1;transl_table=11 NC_000913.3 RefSeq gene 3239944 3241188 . + . ID=gene3151;Dbxref=EcoGene:EG12732,GeneID:947605;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;gene_synonym=ECK3080,JW3060,ygjU;locus_tag=b3089 NC_000913.3 RefSeq CDS 3239944 3241188 . + 0 ID=cds3038;Parent=gene3151;Dbxref=ASAP:ABE-0010159,UniProtKB/Swiss-Prot:P0AGE4,Genbank:NP_417560.1,EcoGene:EG12732,GeneID:947605;Name=NP_417560.1;Note=putative transport protein;gbkey=CDS;gene=sstT;product=sodium:serine/threonine symporter;protein_id=NP_417560.1;transl_table=11 NC_000913.3 RefSeq gene 3241193 3241744 . - . ID=gene3152;Dbxref=EcoGene:EG12733,GeneID:947604;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;gene_synonym=ECK3081,JW3061;locus_tag=b3090 NC_000913.3 RefSeq CDS 3241193 3241744 . - 0 ID=cds3039;Parent=gene3152;Dbxref=ASAP:ABE-0010161,UniProtKB/Swiss-Prot:P42603,Genbank:NP_417561.1,EcoGene:EG12733,GeneID:947604;Name=NP_417561.1;gbkey=CDS;gene=ygjV;product=Imp-YgjV family inner membrane protein;protein_id=NP_417561.1;transl_table=11 NC_000913.3 RefSeq gene 3241827 3243314 . - . ID=gene3153;Dbxref=EcoGene:EG12734,GeneID:947603;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;gene_synonym=ECK3082,JW3062,ygjW;locus_tag=b3091 NC_000913.3 RefSeq CDS 3241827 3243314 . - 0 ID=cds3040;Parent=gene3153;Dbxref=ASAP:ABE-0010164,UniProtKB/Swiss-Prot:P42604,Genbank:NP_417562.1,EcoGene:EG12734,GeneID:947603;Name=NP_417562.1;gbkey=CDS;gene=uxaA;product=altronate hydrolase;protein_id=NP_417562.1;transl_table=11 NC_000913.3 RefSeq gene 3243329 3244741 . - . ID=gene3154;Dbxref=EcoGene:EG12737,GeneID:947599;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;gene_synonym=ECK3083,JW3063,ygjX,ygjY,ygjZ;locus_tag=b3092 NC_000913.3 RefSeq CDS 3243329 3244741 . - 0 ID=cds3041;Parent=gene3154;Dbxref=ASAP:ABE-0010167,UniProtKB/Swiss-Prot:P0A8G3,Genbank:NP_417563.1,EcoGene:EG12737,GeneID:947599;Name=NP_417563.1;gbkey=CDS;gene=uxaC;product=uronate isomerase;protein_id=NP_417563.1;transl_table=11 NC_000913.3 RefSeq gene 3245224 3246522 . + . ID=gene3155;Dbxref=EcoGene:EG12738,GeneID:947601;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;gene_synonym=ECK3084,JW3064;locus_tag=b3093 NC_000913.3 RefSeq CDS 3245224 3246522 . + 0 ID=cds3042;Parent=gene3155;Dbxref=ASAP:ABE-0010171,UniProtKB/Swiss-Prot:P0AA78,Genbank:NP_417564.2,EcoGene:EG12738,GeneID:947601;Name=NP_417564.2;Note=transport of hexuronates;gbkey=CDS;gene=exuT;product=hexuronate transporter;protein_id=NP_417564.2;transl_table=11 NC_000913.3 RefSeq gene 3246652 3247428 . + . ID=gene3156;Dbxref=EcoGene:EG12739,GeneID:947602;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;gene_synonym=ECK3085,JW3065;locus_tag=b3094 NC_000913.3 RefSeq CDS 3246652 3247428 . + 0 ID=cds3043;Parent=gene3156;Dbxref=ASAP:ABE-0010176,UniProtKB/Swiss-Prot:P0ACL2,Genbank:NP_417565.2,EcoGene:EG12739,GeneID:947602;Name=NP_417565.2;Note=negative regulator of exu regulon%2C exuT%2C uxaAC%2C and uxuB;gbkey=CDS;gene=exuR;product=hexuronate regulon transcriptional repressor%3B autorepressor;protein_id=NP_417565.2;transl_table=11 NC_000913.3 RefSeq gene 3247773 3248435 . + . ID=gene3157;Dbxref=EcoGene:EG12740,GeneID:947643;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;gene_synonym=ecfL,ECK3086,JW3066;locus_tag=b3095 NC_000913.3 RefSeq CDS 3247773 3248435 . + 0 ID=cds3044;Parent=gene3157;Dbxref=ASAP:ABE-0010181,UniProtKB/Swiss-Prot:P0AA63,Genbank:NP_417566.1,EcoGene:EG12740,GeneID:947643;Name=NP_417566.1;gbkey=CDS;gene=yqjA;product=general envelope maintenance protein%3B DedA family inner membrane protein%3B putative multidrug efflux transporter;protein_id=NP_417566.1;transl_table=11 NC_000913.3 RefSeq gene 3248439 3248822 . + . ID=gene3158;Dbxref=EcoGene:EG12741,GeneID:947619;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;gene_synonym=ecfM,ECK3087,JW3067,yqjB;locus_tag=b3096 NC_000913.3 RefSeq CDS 3248439 3248822 . + 0 ID=cds3045;Parent=gene3158;Dbxref=ASAP:ABE-0010183,UniProtKB/Swiss-Prot:P42615,Genbank:NP_417567.1,EcoGene:EG12741,GeneID:947619;Name=NP_417567.1;gbkey=CDS;gene=mzrA;product=modulator of EnvZ/OmpR regulon;protein_id=NP_417567.1;transl_table=11 NC_000913.3 RefSeq gene 3248969 3249337 . + . ID=gene3159;Dbxref=EcoGene:EG12742,GeneID:947622;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;gene_synonym=ECK3088,JW5516;locus_tag=b3097 NC_000913.3 RefSeq CDS 3248969 3249337 . + 0 ID=cds3046;Parent=gene3159;Dbxref=ASAP:ABE-0010188,UniProtKB/Swiss-Prot:P42616,Genbank:NP_417568.2,EcoGene:EG12742,GeneID:947622;Name=NP_417568.2;gbkey=CDS;gene=yqjC;product=DUF1090 family putative periplasmic protein;protein_id=NP_417568.2;transl_table=11 NC_000913.3 RefSeq gene 3249375 3249680 . + . ID=gene3160;Dbxref=EcoGene:EG12743,GeneID:947614;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;gene_synonym=ECK3089,JW3069;locus_tag=b3098 NC_000913.3 RefSeq CDS 3249375 3249680 . + 0 ID=cds3047;Parent=gene3160;Dbxref=ASAP:ABE-0010192,UniProtKB/Swiss-Prot:P64581,Genbank:NP_417569.1,EcoGene:EG12743,GeneID:947614;Name=NP_417569.1;gbkey=CDS;gene=yqjD;product=membrane-anchored ribosome-binding protein;protein_id=NP_417569.1;transl_table=11 NC_000913.3 RefSeq gene 3249683 3250087 . + . ID=gene3161;Dbxref=EcoGene:EG12744,GeneID:947611;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;gene_synonym=ECK3090,JW3070;locus_tag=b3099 NC_000913.3 RefSeq CDS 3249683 3250087 . + 0 ID=cds3048;Parent=gene3161;Dbxref=ASAP:ABE-0010195,UniProtKB/Swiss-Prot:P64585,Genbank:NP_417570.1,EcoGene:EG12744,GeneID:947611;Name=NP_417570.1;gbkey=CDS;gene=yqjE;product=DUF1469 family inner membrane protein;protein_id=NP_417570.1;transl_table=11 NC_000913.3 RefSeq gene 3250077 3250376 . + . ID=gene3162;Dbxref=EcoGene:EG14314,GeneID:947610;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;gene_synonym=ECK3091,JW3071;locus_tag=b3100 NC_000913.3 RefSeq CDS 3250077 3250376 . + 0 ID=cds3049;Parent=gene3162;Dbxref=ASAP:ABE-0010197,UniProtKB/Swiss-Prot:Q47710,Genbank:NP_417571.1,EcoGene:EG14314,GeneID:947610;Name=NP_417571.1;gbkey=CDS;gene=yqjK;product=uncharacterized protein;protein_id=NP_417571.1;transl_table=11 NC_000913.3 RefSeq gene 3250562 3250954 . + . ID=gene3163;Dbxref=EcoGene:EG12745,GeneID:947608;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;gene_synonym=ECK3092,JW5850;locus_tag=b3101 NC_000913.3 RefSeq CDS 3250562 3250954 . + 0 ID=cds3050;Parent=gene3163;Dbxref=ASAP:ABE-0010200,UniProtKB/Swiss-Prot:P42619,Genbank:NP_417572.2,EcoGene:EG12745,GeneID:947608;Name=NP_417572.2;gbkey=CDS;gene=yqjF;product=putative quinol oxidase subunit;protein_id=NP_417572.2;transl_table=11 NC_000913.3 RefSeq gene 3251024 3252010 . + . ID=gene3164;Dbxref=EcoGene:EG12746,GeneID:947615;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;gene_synonym=ECK3093,JW3073;locus_tag=b3102 NC_000913.3 RefSeq CDS 3251024 3252010 . + 0 ID=cds3051;Parent=gene3164;Dbxref=ASAP:ABE-0010203,UniProtKB/Swiss-Prot:P42620,Genbank:NP_417573.1,EcoGene:EG12746,GeneID:947615;Name=NP_417573.1;Note=putative transferase;gbkey=CDS;gene=yqjG;product=putative S-transferase;protein_id=NP_417573.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3252065 3252162 . + . ID=id394;Note=RIP234 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3252304 3252669 . + . ID=gene3165;Dbxref=EcoGene:EG12747,GeneID:947617;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;gene_synonym=ECK3094,JW3074;locus_tag=b3103 NC_000913.3 RefSeq CDS 3252304 3252669 . + 0 ID=cds3052;Parent=gene3165;Dbxref=ASAP:ABE-0010207,UniProtKB/Swiss-Prot:P64590,Genbank:NP_417574.1,EcoGene:EG12747,GeneID:947617;Name=NP_417574.1;Note=putative cytochrome;gbkey=CDS;gene=yhaH;product=DUF805 family inner membrane protein;protein_id=NP_417574.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3252683 3252705 . + . ID=id395;Note=REP235 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3252911 3253267 . + . ID=gene3166;Dbxref=EcoGene:EG12748,GeneID:947612;Name=yhaI;gbkey=Gene;gene=yhaI;gene_biotype=protein_coding;gene_synonym=ECK3095,JW3075;locus_tag=b3104 NC_000913.3 RefSeq CDS 3252911 3253267 . + 0 ID=cds3053;Parent=gene3166;Dbxref=ASAP:ABE-0010211,UniProtKB/Swiss-Prot:P64592,Genbank:NP_417575.1,EcoGene:EG12748,GeneID:947612;Name=NP_417575.1;Note=putative cytochrome;gbkey=CDS;gene=yhaI;product=DUF805 family inner membrane protein;protein_id=NP_417575.1;transl_table=11 NC_000913.3 RefSeq gene 3253318 3254214 . - . ID=gene3167;Dbxref=EcoGene:EG12749,GeneID:947621;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;gene_synonym=ECK3096,JW3076;locus_tag=b3105 NC_000913.3 RefSeq CDS 3253318 3254214 . - 0 ID=cds3054;Parent=gene3167;Dbxref=ASAP:ABE-0010213,UniProtKB/Swiss-Prot:P67660,Genbank:NP_417576.1,EcoGene:EG12749,GeneID:947621;Name=NP_417576.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yhaJ;product=LysR family putative transcriptional regulator;protein_id=NP_417576.1;transl_table=11 NC_000913.3 RefSeq gene 3254319 3255020 . + . ID=gene3168;Dbxref=EcoGene:EG12750,GeneID:947620;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;gene_synonym=ECK3097,JW3077;locus_tag=b3106 NC_000913.3 RefSeq CDS 3254319 3255020 . + 0 ID=cds3055;Parent=gene3168;Dbxref=ASAP:ABE-0010217,UniProtKB/Swiss-Prot:P42624,Genbank:NP_417577.1,EcoGene:EG12750,GeneID:947620;Name=NP_417577.1;gbkey=CDS;gene=yhaK;product=redox-sensitive bicupin;protein_id=NP_417577.1;transl_table=11 NC_000913.3 RefSeq gene 3255043 3255207 . + . ID=gene3169;Dbxref=EcoGene:EG12751,GeneID:947618;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;gene_synonym=ECK3098,JW5517;locus_tag=b3107 NC_000913.3 RefSeq CDS 3255043 3255207 . + 0 ID=cds3056;Parent=gene3169;Dbxref=ASAP:ABE-0010219,UniProtKB/Swiss-Prot:P42625,Genbank:NP_417578.2,EcoGene:EG12751,GeneID:947618;Name=NP_417578.2;gbkey=CDS;gene=yhaL;product=uncharacterized protein;protein_id=NP_417578.2;transl_table=11 NC_000913.3 RefSeq repeat_region 3255217 3255319 . + . ID=id396;Note=REP236 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3255341 3256651 . - . ID=gene3170;Dbxref=EcoGene:EG12752,GeneID:2847723;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;gene_synonym=ECK3099,JW5518,yhaN;locus_tag=b4470 NC_000913.3 RefSeq CDS 3255341 3256651 . - 0 ID=cds3057;Parent=gene3170;Dbxref=ASAP:ABE-0174100,UniProtKB/Swiss-Prot:P42626,Genbank:YP_026202.1,EcoGene:EG12752,GeneID:2847723;Name=YP_026202.1;Note=conserved hypothetical protein;gbkey=CDS;gene=yhaM;product=putative L-serine dehydratase alpha chain;protein_id=YP_026202.1;transl_table=11 NC_000913.3 RefSeq gene 3256679 3258010 . - . ID=gene3171;Dbxref=EcoGene:EG12754,GeneID:947628;Name=yhaO;gbkey=Gene;gene=yhaO;gene_biotype=protein_coding;gene_synonym=ECK3100,JW5519;locus_tag=b3110 NC_000913.3 RefSeq CDS 3256679 3258010 . - 0 ID=cds3058;Parent=gene3171;Dbxref=ASAP:ABE-0010228,UniProtKB/Swiss-Prot:P42628,Genbank:YP_026203.3,EcoGene:EG12754,GeneID:947628;Name=YP_026203.3;Note=putative transport system permease protein;gbkey=CDS;gene=yhaO;product=putative transporter;protein_id=YP_026203.3;transl_table=11 NC_000913.3 RefSeq gene 3258285 3259649 . - . ID=gene3172;Dbxref=EcoGene:EG12756,GeneID:2847724;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;gene_synonym=ECK3101,JW5520,yhaP,yhaQ;locus_tag=b4471 NC_000913.3 RefSeq CDS 3258285 3259649 . - 0 ID=cds3059;Parent=gene3172;Dbxref=ASAP:ABE-0174101,UniProtKB/Swiss-Prot:P42630,Genbank:YP_026204.1,EcoGene:EG12756,GeneID:2847724;Name=YP_026204.1;Note=L-serine dehydratase;gbkey=CDS;gene=tdcG;product=L-serine dehydratase 3%2C anaerobic;protein_id=YP_026204.1;transl_table=11 NC_000913.3 RefSeq gene 3259721 3260110 . - . ID=gene3173;Dbxref=EcoGene:EG12757,GeneID:947624;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;gene_synonym=ECK3102,JW5521,yhaR;locus_tag=b3113 NC_000913.3 RefSeq CDS 3259721 3260110 . - 0 ID=cds3060;Parent=gene3173;Dbxref=ASAP:ABE-0010240,UniProtKB/Swiss-Prot:P0AGL2,Genbank:NP_417583.4,EcoGene:EG12757,GeneID:947624;Name=NP_417583.4;gbkey=CDS;gene=tdcF;product=putative reactive intermediate deaminase;protein_id=NP_417583.4;transl_table=11 NC_000913.3 RefSeq gene 3260124 3262418 . - . ID=gene3174;Dbxref=EcoGene:EG12758,GeneID:947623;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;gene_synonym=ECK3103,JW5522,yhaS;locus_tag=b3114 NC_000913.3 RefSeq CDS 3260124 3262418 . - 0 ID=cds3061;Parent=gene3174;Dbxref=ASAP:ABE-0010242,UniProtKB/Swiss-Prot:P42632,Genbank:YP_026205.1,EcoGene:EG12758,GeneID:947623;Name=YP_026205.1;Note=probable formate acetyltransferase 3;gbkey=CDS;gene=tdcE;product=pyruvate formate-lyase 4/2-ketobutyrate formate-lyase;protein_id=YP_026205.1;transl_table=11 NC_000913.3 RefSeq gene 3262452 3263660 . - . ID=gene3175;Dbxref=EcoGene:EG11172,GeneID:947635;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;gene_synonym=ECK3104,JW5806,yhaA;locus_tag=b3115 NC_000913.3 RefSeq CDS 3262452 3263660 . - 0 ID=cds3062;Parent=gene3175;Dbxref=ASAP:ABE-0010245,UniProtKB/Swiss-Prot:P11868,Genbank:NP_417585.2,EcoGene:EG11172,GeneID:947635;Name=NP_417585.2;Note=propionate kinase/acetate kinase II%2C anaerobic;gbkey=CDS;gene=tdcD;product=propionate kinase/acetate kinase C%2C anaerobic;protein_id=NP_417585.2;transl_table=11 NC_000913.3 RefSeq gene 3263686 3265017 . - . ID=gene3176;Dbxref=EcoGene:EG10991,GeneID:947629;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;gene_synonym=ECK3105,JW3087;locus_tag=b3116 NC_000913.3 RefSeq CDS 3263686 3265017 . - 0 ID=cds3063;Parent=gene3176;Dbxref=ASAP:ABE-0010247,UniProtKB/Swiss-Prot:P0AAD8,Genbank:NP_417586.1,EcoGene:EG10991,GeneID:947629;Name=NP_417586.1;Note=anaerobically inducible L-threonine%2C L-serine permease;gbkey=CDS;gene=tdcC;product=L-threonine/L-serine transporter;protein_id=NP_417586.1;transl_table=11 NC_000913.3 RefSeq gene 3265039 3266028 . - . ID=gene3177;Dbxref=EcoGene:EG10990,GeneID:947633;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;gene_synonym=ECK3106,JW3088;locus_tag=b3117 NC_000913.3 RefSeq CDS 3265039 3266028 . - 0 ID=cds3064;Parent=gene3177;Dbxref=ASAP:ABE-0010249,UniProtKB/Swiss-Prot:P0AGF6,Genbank:NP_417587.1,EcoGene:EG10990,GeneID:947633;Name=NP_417587.1;Note=threonine dehydratase%2C catabolic;gbkey=CDS;gene=tdcB;product=L-threonine dehydratase%2C catabolic;protein_id=NP_417587.1;transl_table=11 NC_000913.3 RefSeq gene 3266127 3267065 . - . ID=gene3178;Dbxref=EcoGene:EG10989,GeneID:947494;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;gene_synonym=ECK3107,JW3089;locus_tag=b3118 NC_000913.3 RefSeq CDS 3266127 3267065 . - 0 ID=cds3065;Parent=gene3178;Dbxref=ASAP:ABE-0010252,UniProtKB/Swiss-Prot:P0ACQ7,Genbank:NP_417588.1,EcoGene:EG10989,GeneID:947494;Name=NP_417588.1;Note=transcriptional activator of tdc operon;gbkey=CDS;gene=tdcA;product=tdc operon transcriptional activator;protein_id=NP_417588.1;transl_table=11 NC_000913.3 RefSeq gene 3267380 3267598 . + . ID=gene3179;Dbxref=EcoGene:EG10992,GeneID:944907;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;gene_synonym=ECK3108,JW5525;locus_tag=b3119 NC_000913.3 RefSeq CDS 3267380 3267598 . + 0 ID=cds3066;Parent=gene3179;Dbxref=ASAP:ABE-0010255,UniProtKB/Swiss-Prot:P11866,Genbank:NP_417589.4,EcoGene:EG10992,GeneID:944907;Name=NP_417589.4;Note=threonine dehydratase operon activator protein;gbkey=CDS;gene=tdcR;product=L-threonine dehydratase operon activator protein;protein_id=NP_417589.4;transl_table=11 NC_000913.3 RefSeq gene 3267854 3268393 . + . ID=gene3180;Dbxref=EcoGene:EG11173,GeneID:947705;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;gene_synonym=ECK3109,JW3091;locus_tag=b3120 NC_000913.3 RefSeq CDS 3267854 3268393 . + 0 ID=cds3067;Parent=gene3180;Dbxref=ASAP:ABE-0010261,UniProtKB/Swiss-Prot:P11865,Genbank:NP_417590.2,EcoGene:EG11173,GeneID:947705;Name=NP_417590.2;gbkey=CDS;gene=yhaB;product=uncharacterized protein;protein_id=NP_417590.2;transl_table=11 NC_000913.3 RefSeq gene 3268415 3269602 . + . ID=gene3181;Dbxref=EcoGene:EG11174,GeneID:947557;Name=yhaC;gbkey=Gene;gene=yhaC;gene_biotype=protein_coding;gene_synonym=ECK3110,JW3092;locus_tag=b3121 NC_000913.3 RefSeq CDS 3268415 3269602 . + 0 ID=cds3068;Parent=gene3181;Dbxref=ASAP:ABE-0010263,UniProtKB/Swiss-Prot:P11864,Genbank:NP_417591.1,EcoGene:EG11174,GeneID:947557;Name=NP_417591.1;gbkey=CDS;gene=yhaC;product=pentapetide repeats-related protein;protein_id=NP_417591.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3269722 3269819 . + . ID=id397;Note=RIP237 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3270216 3270592 . - . ID=gene3182;Dbxref=EcoGene:EG30069,GeneID:947634;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;gene_synonym=ECK3111,JWR0070;locus_tag=b3123 NC_000913.3 RefSeq ncRNA 3270216 3270592 . - . ID=rna112;Parent=gene3182;Dbxref=ASAP:ABE-0010269,EcoGene:EG30069,GeneID:947634;Note=RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA%2C 4.5S RNA%2C and other naturally occurring stable RNA molecules%3B RNase P also affects gene expression of polycistronic operon mRNAs;gbkey=ncRNA;gene=rnpB;ncrna_class=RNase_P_RNA;product=RNase P%2C M1 RNA component NC_000913.3 RefSeq exon 3270216 3270592 . - . ID=id398;Parent=rna112;Dbxref=ASAP:ABE-0010269,EcoGene:EG30069,GeneID:947634;Note=RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA%2C 4.5S RNA%2C and other naturally occurring stable RNA molecules%3B RNase P also affects gene expression of polycistronic operon mRNAs;gbkey=ncRNA;gene=rnpB;ncrna_class=RNase_P_RNA;product=RNase P%2C M1 RNA component NC_000913.3 RefSeq gene 3270625 3271770 . - . ID=gene3183;Dbxref=EcoGene:EG11175,GeneID:947632;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;gene_synonym=ECK3112,JW3093,yhaD;locus_tag=b3124 NC_000913.3 RefSeq CDS 3270625 3271770 . - 0 ID=cds3069;Parent=gene3183;Dbxref=ASAP:ABE-0010271,UniProtKB/Swiss-Prot:P23524,Genbank:NP_417593.4,EcoGene:EG11175,GeneID:947632;Name=NP_417593.4;gbkey=CDS;gene=garK;product=glycerate kinase I;protein_id=NP_417593.4;transl_table=11 NC_000913.3 RefSeq gene 3271867 3272751 . - . ID=gene3184;Dbxref=EcoGene:EG11176,GeneID:947631;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;gene_synonym=ECK3113,JW5526,yhaE;locus_tag=b3125 NC_000913.3 RefSeq CDS 3271867 3272751 . - 0 ID=cds3070;Parent=gene3184;Dbxref=ASAP:ABE-0010273,UniProtKB/Swiss-Prot:P0ABQ2,Genbank:NP_417594.3,EcoGene:EG11176,GeneID:947631;Name=NP_417594.3;Note=tartronate semialdehyde reductase (TSAR);gbkey=CDS;gene=garR;product=tartronate semialdehyde reductase;protein_id=NP_417594.3;transl_table=11 NC_000913.3 RefSeq gene 3272787 3273557 . - . ID=gene3185;Dbxref=EcoGene:EG10016,GeneID:947630;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;gene_synonym=ECK3114,JW3095,yhaF;locus_tag=b3126 NC_000913.3 RefSeq CDS 3272787 3273557 . - 0 ID=cds3071;Parent=gene3185;Dbxref=ASAP:ABE-0010276,UniProtKB/Swiss-Prot:P23522,Genbank:NP_417595.1,EcoGene:EG10016,GeneID:947630;Name=NP_417595.1;gbkey=CDS;gene=garL;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=NP_417595.1;transl_table=11 NC_000913.3 RefSeq gene 3273573 3274907 . - . ID=gene3186;Dbxref=EcoGene:EG12760,GeneID:947642;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;gene_synonym=ECK3115,JW3096,yhaU;locus_tag=b3127 NC_000913.3 RefSeq CDS 3273573 3274907 . - 0 ID=cds3072;Parent=gene3186;Dbxref=ASAP:ABE-0010279,UniProtKB/Swiss-Prot:P0AA80,Genbank:NP_417596.1,EcoGene:EG12760,GeneID:947642;Name=NP_417596.1;Note=putative transport protein;gbkey=CDS;gene=garP;product=putative (D)-galactarate transporter;protein_id=NP_417596.1;transl_table=11 NC_000913.3 RefSeq gene 3275282 3276853 . + . ID=gene3187;Dbxref=EcoGene:EG12522,GeneID:947641;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;gene_synonym=ECK3116,JW3097,yhaG;locus_tag=b3128 NC_000913.3 RefSeq CDS 3275282 3276853 . + 0 ID=cds3073;Parent=gene3187;Dbxref=ASAP:ABE-0010284,UniProtKB/Swiss-Prot:P39829,Genbank:NP_417597.1,EcoGene:EG12522,GeneID:947641;Name=NP_417597.1;gbkey=CDS;gene=garD;product=D-galactarate dehydrogenase;protein_id=NP_417597.1;transl_table=11 NC_000913.3 RefSeq gene 3277002 3277337 . + . ID=gene3188;Dbxref=EcoGene:EG10955,GeneID:947639;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;gene_synonym=ECK3117,JW3098,sohA;locus_tag=b3129 NC_000913.3 RefSeq CDS 3277002 3277337 . + 0 ID=cds3074;Parent=gene3188;Dbxref=ASAP:ABE-0010287,UniProtKB/Swiss-Prot:P15373,Genbank:NP_417598.1,EcoGene:EG10955,GeneID:947639;Name=NP_417598.1;Note=putative protease%3B htrA suppressor protein;gbkey=CDS;gene=prlF;product=antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system;protein_id=NP_417598.1;transl_table=11 NC_000913.3 RefSeq gene 3277337 3277801 . + . ID=gene3189;Dbxref=EcoGene:EG12761,GeneID:947638;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;gene_synonym=ECK3118,JW3099;locus_tag=b3130 NC_000913.3 RefSeq CDS 3277337 3277801 . + 0 ID=cds3075;Parent=gene3189;Dbxref=ASAP:ABE-0010289,UniProtKB/Swiss-Prot:P64594,Genbank:NP_417599.1,EcoGene:EG12761,GeneID:947638;Name=NP_417599.1;gbkey=CDS;gene=yhaV;product=toxin of the SohB(PrlF)-YhaV toxin-antitoxin system;protein_id=NP_417599.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3277819 3277847 . + . ID=id399;Note=REP238 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3277856 3278665 . - . ID=gene3190;Dbxref=EcoGene:EG12762,GeneID:947636;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;gene_synonym=ECK3119,JW3100,yhaW;locus_tag=b3131 NC_000913.3 RefSeq CDS 3277856 3278665 . - 0 ID=cds3076;Parent=gene3190;Dbxref=ASAP:ABE-0010291,UniProtKB/Swiss-Prot:P0ACK2,Genbank:NP_417600.1,EcoGene:EG12762,GeneID:947636;Name=NP_417600.1;Note=putative DEOR-type transcriptional regulator of aga operon;gbkey=CDS;gene=agaR;product=transcriptional repressor of the aga regulon;protein_id=NP_417600.1;transl_table=11 NC_000913.3 RefSeq gene 3278914 3280194 . + . ID=gene3191;Dbxref=EcoGene:EG12763,GeneID:947637;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;gene_synonym=agaZ,ECK3120,JW3101,yhaX;locus_tag=b3132 NC_000913.3 RefSeq CDS 3278914 3280194 . + 0 ID=cds3077;Parent=gene3191;Dbxref=ASAP:ABE-0010295,UniProtKB/Swiss-Prot:P0C8K0,Genbank:NP_417601.1,EcoGene:EG12763,GeneID:947637;Name=NP_417601.1;Note=putative tagatose 6-phosphate kinase 2;gbkey=CDS;gene=kbaZ;product=tagatose 6-phosphate aldolase 1%2C kbaZ subunit;protein_id=NP_417601.1;transl_table=11 NC_000913.3 RefSeq gene 3280217 3280690 . + . ID=gene3192;Dbxref=EcoGene:EG12764,GeneID:947648;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;gene_synonym=ECK3121,JW3102,yhaY;locus_tag=b3133 NC_000913.3 RefSeq CDS 3280217 3280690 . + 0 ID=cds3078;Parent=gene3192;Dbxref=ASAP:ABE-0010297,UniProtKB/Swiss-Prot:P42904,Genbank:NP_417602.4,EcoGene:EG12764,GeneID:947648;Name=NP_417602.4;Note=PTS system%2C cytoplasmic%2C N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA);gbkey=CDS;gene=agaV;product=N-acetylgalactosamine-specific enzyme IIB component of PTS;protein_id=NP_417602.4;transl_table=11 NC_000913.3 RefSeq gene 3280701 3281075 . + . ID=gene3193;Dbxref=EcoGene:EG12765,GeneID:947647;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=pseudogene;gene_synonym=ECK3122,JW3103,yhaZ;locus_tag=b3134;pseudo=true NC_000913.3 RefSeq CDS 3280701 3281075 . + 0 ID=cds3079;Parent=gene3193;Dbxref=ASAP:ABE-0010299,UniProtKB/Swiss-Prot:P42905,EcoGene:EG12765,GeneID:947647;Note=pseudogene%2C N-acetylgalactosamine-specific enzyme IIC component of PTS%3Benzyme%3B Central intermediary metabolism: Amino sugars~PTS system N-acetylgalactosameine-specific IIC component 2;gbkey=CDS;gene=agaW;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3281071 3281625 . + . ID=gene3194;Dbxref=EcoGene:EG12766,GeneID:947646;Name=agaA;gbkey=Gene;gene=agaA;gene_biotype=pseudogene;gene_synonym=ECK3123,JW5527,yraA;locus_tag=b3135;pseudo=true NC_000913.3 RefSeq CDS 3281071 3281625 . + 0 ID=cds3080;Parent=gene3194;Dbxref=ASAP:ABE-0010302,UniProtKB/Swiss-Prot:P42906,EcoGene:EG12766,GeneID:947646;Note=pseudogene%2C N-acetylgalactosamine-6-phosphate deacetylase fragment~putative N-acetylgalactosamine-6-phosphate deacetylase;gbkey=CDS;gene=agaA;pseudo=true;transl_table=11 NC_000913.3 RefSeq repeat_region 3281702 3281783 . + . ID=id400;Note=REP239 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3281976 3283130 . + . ID=gene3195;Dbxref=EcoGene:EG12767,GeneID:947645;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;gene_synonym=ECK3124,JW3105,yraB;locus_tag=b3136 NC_000913.3 RefSeq CDS 3281976 3283130 . + 0 ID=cds3081;Parent=gene3195;Dbxref=ASAP:ABE-0010305,UniProtKB/Swiss-Prot:P42907,Genbank:NP_417605.1,EcoGene:EG12767,GeneID:947645;Name=NP_417605.1;Note=putative tagatose-6-phosphate aldose/ketose isomerase;gbkey=CDS;gene=agaS;product=tagatose-6-phosphate ketose/aldose isomerase;protein_id=NP_417605.1;transl_table=11 NC_000913.3 RefSeq gene 3283143 3284003 . + . ID=gene3196;Dbxref=EcoGene:EG12768,GeneID:947644;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;gene_synonym=agaY,ECK3125,JW3106,kba,yraC;locus_tag=b3137 NC_000913.3 RefSeq CDS 3283143 3284003 . + 0 ID=cds3082;Parent=gene3196;Dbxref=ASAP:ABE-0010307,UniProtKB/Swiss-Prot:P0AB74,Genbank:NP_417606.1,EcoGene:EG12768,GeneID:947644;Name=NP_417606.1;Note=tagatose-bisphosphate aldolase 2;gbkey=CDS;gene=kbaY;product=tagatose 6-phosphate aldolase 1%2C kbaY subunit;protein_id=NP_417606.1;transl_table=11 NC_000913.3 RefSeq gene 3284170 3284646 . + . ID=gene3197;Dbxref=EcoGene:EG12769,GeneID:947653;Name=agaB;gbkey=Gene;gene=agaB;gene_biotype=protein_coding;gene_synonym=ECK3126,JW3107,yraD;locus_tag=b3138 NC_000913.3 RefSeq CDS 3284170 3284646 . + 0 ID=cds3083;Parent=gene3197;Dbxref=ASAP:ABE-0010310,UniProtKB/Swiss-Prot:P42909,Genbank:NP_417607.1,EcoGene:EG12769,GeneID:947653;Name=NP_417607.1;Note=PTS system%2C cytoplasmic%2C N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA);gbkey=CDS;gene=agaB;product=N-acetylgalactosamine-specific enzyme IIB component of PTS;protein_id=NP_417607.1;transl_table=11 NC_000913.3 RefSeq gene 3284685 3285488 . + . ID=gene3198;Dbxref=EcoGene:EG12770,GeneID:947652;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;gene_synonym=ECK3127,JW3108,yraE;locus_tag=b3139 NC_000913.3 RefSeq CDS 3284685 3285488 . + 0 ID=cds3084;Parent=gene3198;Dbxref=ASAP:ABE-0010312,UniProtKB/Swiss-Prot:P42910,Genbank:NP_417608.1,EcoGene:EG12770,GeneID:947652;Name=NP_417608.1;Note=PTS system N-acetylgalactosamine-specific IIC component 1;gbkey=CDS;gene=agaC;product=N-acetylgalactosamine-specific enzyme IIC component of PTS;protein_id=NP_417608.1;transl_table=11 NC_000913.3 RefSeq gene 3285478 3286269 . + . ID=gene3199;Dbxref=EcoGene:EG12771,GeneID:947649;Name=agaD;gbkey=Gene;gene=agaD;gene_biotype=protein_coding;gene_synonym=ECK3128,JW3109,yraF;locus_tag=b3140 NC_000913.3 RefSeq CDS 3285478 3286269 . + 0 ID=cds3085;Parent=gene3199;Dbxref=ASAP:ABE-0010314,UniProtKB/Swiss-Prot:P42911,Genbank:NP_417609.1,EcoGene:EG12771,GeneID:947649;Name=NP_417609.1;Note=PTS system%2C N-acetylglucosamine enzyme IID component 1;gbkey=CDS;gene=agaD;product=N-acetylgalactosamine-specific enzyme IID component of PTS;protein_id=NP_417609.1;transl_table=11 NC_000913.3 RefSeq gene 3286270 3287025 . + . ID=gene3200;Dbxref=EcoGene:EG12772,GeneID:947985;Name=agaI;gbkey=Gene;gene=agaI;gene_biotype=protein_coding;gene_synonym=ECK3129,JW3110,yraG;locus_tag=b3141 NC_000913.3 RefSeq CDS 3286270 3287025 . + 0 ID=cds3086;Parent=gene3200;Dbxref=ASAP:ABE-0010317,UniProtKB/Swiss-Prot:P42912,Genbank:NP_417610.1,EcoGene:EG12772,GeneID:947985;Name=NP_417610.1;Note=putative galactosamine-6-phosphate isomerase;gbkey=CDS;gene=agaI;product=galactosamine-6-phosphate isomerase;protein_id=NP_417610.1;transl_table=11 NC_000913.3 RefSeq gene 3287426 3288010 . + . ID=gene3201;Dbxref=EcoGene:EG12773,GeneID:947658;Name=yraH;gbkey=Gene;gene=yraH;gene_biotype=protein_coding;gene_synonym=ECK3130,JW3111;locus_tag=b3142 NC_000913.3 RefSeq CDS 3287426 3288010 . + 0 ID=cds3087;Parent=gene3201;Dbxref=ASAP:ABE-0010325,UniProtKB/Swiss-Prot:P42913,Genbank:NP_417611.1,EcoGene:EG12773,GeneID:947658;Name=NP_417611.1;Note=putative fimbrial-like protein;gbkey=CDS;gene=yraH;product=putative fimbrial-like adhesin protein;protein_id=NP_417611.1;transl_table=11 NC_000913.3 RefSeq gene 3288090 3288785 . + . ID=gene3202;Dbxref=EcoGene:EG12774,GeneID:947657;Name=yraI;gbkey=Gene;gene=yraI;gene_biotype=protein_coding;gene_synonym=ECK3131,JW3112;locus_tag=b3143 NC_000913.3 RefSeq CDS 3288090 3288785 . + 0 ID=cds3088;Parent=gene3202;Dbxref=ASAP:ABE-0010331,UniProtKB/Swiss-Prot:P42914,Genbank:NP_417612.1,EcoGene:EG12774,GeneID:947657;Name=NP_417612.1;Note=putative chaperone;gbkey=CDS;gene=yraI;product=putative periplasmic pilin chaperone;protein_id=NP_417612.1;transl_table=11 NC_000913.3 RefSeq gene 3288814 3291330 . + . ID=gene3203;Dbxref=EcoGene:EG12775,GeneID:947656;Name=yraJ;gbkey=Gene;gene=yraJ;gene_biotype=protein_coding;gene_synonym=ECK3132,JW3113;locus_tag=b3144 NC_000913.3 RefSeq CDS 3288814 3291330 . + 0 ID=cds3089;Parent=gene3203;Dbxref=ASAP:ABE-0010333,UniProtKB/Swiss-Prot:P42915,Genbank:NP_417613.1,EcoGene:EG12775,GeneID:947656;Name=NP_417613.1;Note=putative outer membrane protein;gbkey=CDS;gene=yraJ;product=putative outer membrane protein;protein_id=NP_417613.1;transl_table=11 NC_000913.3 RefSeq gene 3291341 3292432 . + . ID=gene3204;Dbxref=EcoGene:EG12776,GeneID:947654;Name=yraK;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;gene_synonym=ECK3133,JW3114;locus_tag=b3145 NC_000913.3 RefSeq CDS 3291341 3292432 . + 0 ID=cds3090;Parent=gene3204;Dbxref=ASAP:ABE-0010335,UniProtKB/Swiss-Prot:P43319,Genbank:NP_417614.1,EcoGene:EG12776,GeneID:947654;Name=NP_417614.1;Note=putative fimbrial protein;gbkey=CDS;gene=yraK;product=putative fimbrial-like adhesin protein;protein_id=NP_417614.1;transl_table=11 NC_000913.3 RefSeq gene 3292475 3293335 . - . ID=gene3205;Dbxref=EcoGene:EG12777,GeneID:947664;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;gene_synonym=ECK3134,JW3115,yraL;locus_tag=b3146 NC_000913.3 RefSeq CDS 3292475 3293335 . - 0 ID=cds3091;Parent=gene3205;Dbxref=ASAP:ABE-0010337,UniProtKB/Swiss-Prot:P67087,Genbank:NP_417615.1,EcoGene:EG12777,GeneID:947664;Name=NP_417615.1;gbkey=CDS;gene=rsmI;product=16S rRNA C1402 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=NP_417615.1;transl_table=11 NC_000913.3 RefSeq gene 3293400 3295436 . + . ID=gene3206;Dbxref=EcoGene:EG12778,GeneID:947663;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;gene_synonym=ECK3135,JW3116,yraM;locus_tag=b3147 NC_000913.3 RefSeq CDS 3293400 3295436 . + 0 ID=cds3092;Parent=gene3206;Dbxref=ASAP:ABE-0010343,UniProtKB/Swiss-Prot:P45464,Genbank:NP_417616.1,EcoGene:EG12778,GeneID:947663;Name=NP_417616.1;Note=putative glycosylase;gbkey=CDS;gene=lpoA;product=OM lipoprotein stimulator of MrcA transpeptidase;protein_id=NP_417616.1;transl_table=11 NC_000913.3 RefSeq gene 3295394 3295789 . + . ID=gene3207;Dbxref=EcoGene:EG12779,GeneID:947662;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;gene_synonym=ECK3136,JW3117;locus_tag=b3148 NC_000913.3 RefSeq CDS 3295394 3295789 . + 0 ID=cds3093;Parent=gene3207;Dbxref=ASAP:ABE-0010346,UniProtKB/Swiss-Prot:P45465,Genbank:NP_417617.1,EcoGene:EG12779,GeneID:947662;Name=NP_417617.1;gbkey=CDS;gene=yraN;product=UPF0102 family protein;protein_id=NP_417617.1;transl_table=11 NC_000913.3 RefSeq gene 3295809 3296399 . + . ID=gene3208;Dbxref=EcoGene:EG12780,GeneID:947661;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;gene_synonym=ECK3137,JW3118,yraO;locus_tag=b3149 NC_000913.3 RefSeq CDS 3295809 3296399 . + 0 ID=cds3094;Parent=gene3208;Dbxref=ASAP:ABE-0010348,UniProtKB/Swiss-Prot:P66817,Genbank:NP_417618.1,EcoGene:EG12780,GeneID:947661;Name=NP_417618.1;gbkey=CDS;gene=diaA;product=DnaA initiator-associating factor for replication initiation;protein_id=NP_417618.1;transl_table=11 NC_000913.3 RefSeq gene 3296409 3296984 . + . ID=gene3209;Dbxref=EcoGene:EG12781,GeneID:947659;Name=yraP;gbkey=Gene;gene=yraP;gene_biotype=protein_coding;gene_synonym=ecfH,ECK3138,JW3119;locus_tag=b3150 NC_000913.3 RefSeq CDS 3296409 3296984 . + 0 ID=cds3095;Parent=gene3209;Dbxref=ASAP:ABE-0010350,UniProtKB/Swiss-Prot:P64596,Genbank:NP_417619.1,EcoGene:EG12781,GeneID:947659;Name=NP_417619.1;Note=putative periplasmic protein;gbkey=CDS;gene=yraP;product=outer membrane lipoprotein;protein_id=NP_417619.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3296999 3297082 . + . ID=id401;Note=REP240 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3297098 3298138 . - . ID=gene3210;Dbxref=EcoGene:EG12782,GeneID:947668;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;gene_synonym=ECK3139,JW3120;locus_tag=b3151 NC_000913.3 RefSeq CDS 3297098 3298138 . - 0 ID=cds3096;Parent=gene3210;Dbxref=ASAP:ABE-0010353,UniProtKB/Swiss-Prot:P45468,Genbank:NP_417620.1,EcoGene:EG12782,GeneID:947668;Name=NP_417620.1;gbkey=CDS;gene=yraQ;product=putative inner membrane permease;protein_id=NP_417620.1;transl_table=11 NC_000913.3 RefSeq gene 3298211 3298846 . - . ID=gene3211;Dbxref=EcoGene:EG12783,GeneID:947667;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;gene_synonym=ECK3140,JW5528;locus_tag=b3152 NC_000913.3 RefSeq CDS 3298211 3298846 . - 0 ID=cds3097;Parent=gene3211;Dbxref=ASAP:ABE-0010356,UniProtKB/Swiss-Prot:P45469,Genbank:NP_417621.2,EcoGene:EG12783,GeneID:947667;Name=NP_417621.2;gbkey=CDS;gene=yraR;product=putative nucleoside-diphosphate-sugar epimerase;protein_id=NP_417621.2;transl_table=11 NC_000913.3 RefSeq gene 3298974 3299492 . + . ID=gene3212;Dbxref=EcoGene:EG12784,GeneID:947666;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;gene_synonym=ECK3141,JW5529;locus_tag=b3153 NC_000913.3 RefSeq CDS 3298974 3299492 . + 0 ID=cds3098;Parent=gene3212;Dbxref=ASAP:ABE-0010361,UniProtKB/Swiss-Prot:P45470,Genbank:NP_417622.2,EcoGene:EG12784,GeneID:947666;Name=NP_417622.2;gbkey=CDS;gene=yhbO;product=stress-resistance protein;protein_id=NP_417622.2;transl_table=11 NC_000913.3 RefSeq gene 3299472 3299915 . - . ID=gene3213;Dbxref=EcoGene:EG12785,GeneID:947665;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;gene_synonym=ECK3142,JW3123;locus_tag=b3154 NC_000913.3 RefSeq CDS 3299472 3299915 . - 0 ID=cds3099;Parent=gene3213;Dbxref=ASAP:ABE-0010363,UniProtKB/Swiss-Prot:P67762,Genbank:NP_417623.1,EcoGene:EG12785,GeneID:947665;Name=NP_417623.1;gbkey=CDS;gene=yhbP;product=UPF0306 family protein;protein_id=NP_417623.1;transl_table=11 NC_000913.3 RefSeq gene 3299966 3300268 . + . ID=gene3214;Dbxref=EcoGene:EG12786,GeneID:947671;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;gene_synonym=ECK3143,JW3124;locus_tag=b3155 NC_000913.3 RefSeq CDS 3299966 3300268 . + 0 ID=cds3100;Parent=gene3214;Dbxref=ASAP:ABE-0010370,UniProtKB/Swiss-Prot:P45472,Genbank:NP_417624.1,EcoGene:EG12786,GeneID:947671;Name=NP_417624.1;gbkey=CDS;gene=yhbQ;product=GIY-YIG nuclease superfamily protein;protein_id=NP_417624.1;transl_table=11 NC_000913.3 RefSeq gene 3300255 3300758 . - . ID=gene3215;Dbxref=EcoGene:EG12788,GeneID:947670;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;gene_synonym=ECK3144,JW3125;locus_tag=b3156 NC_000913.3 RefSeq CDS 3300255 3300758 . - 0 ID=cds3101;Parent=gene3215;Dbxref=ASAP:ABE-0010373,UniProtKB/Swiss-Prot:P63417,Genbank:NP_417625.1,EcoGene:EG12788,GeneID:947670;Name=NP_417625.1;gbkey=CDS;gene=yhbS;product=GNAT family putative N-acetyltransferase;protein_id=NP_417625.1;transl_table=11 NC_000913.3 RefSeq gene 3300752 3301276 . - . ID=gene3216;Dbxref=EcoGene:EG12789,GeneID:947669;Name=yhbT;gbkey=Gene;gene=yhbT;gene_biotype=protein_coding;gene_synonym=ECK3145,JW3126;locus_tag=b3157 NC_000913.3 RefSeq CDS 3300752 3301276 . - 0 ID=cds3102;Parent=gene3216;Dbxref=ASAP:ABE-0010375,UniProtKB/Swiss-Prot:P64599,Genbank:NP_417626.1,EcoGene:EG12789,GeneID:947669;Name=NP_417626.1;gbkey=CDS;gene=yhbT;product=SCP-2 sterol transfer family protein;protein_id=NP_417626.1;transl_table=11 NC_000913.3 RefSeq gene 3301485 3302480 . + . ID=gene3217;Dbxref=EcoGene:EG12790,GeneID:949115;Name=yhbU;gbkey=Gene;gene=yhbU;gene_biotype=protein_coding;gene_synonym=ECK3146,JW3127;locus_tag=b3158 NC_000913.3 RefSeq CDS 3301485 3302480 . + 0 ID=cds3103;Parent=gene3217;Dbxref=ASAP:ABE-0010380,UniProtKB/Swiss-Prot:P45527,Genbank:NP_417627.1,EcoGene:EG12790,GeneID:949115;Name=NP_417627.1;Note=putative collagenase;gbkey=CDS;gene=yhbU;product=U32 peptidase family protein;protein_id=NP_417627.1;transl_table=11 NC_000913.3 RefSeq gene 3302489 3303367 . + . ID=gene3218;Dbxref=EcoGene:EG12791,GeneID:949117;Name=yhbV;gbkey=Gene;gene=yhbV;gene_biotype=protein_coding;gene_synonym=ECK3147,JW5530;locus_tag=b3159 NC_000913.3 RefSeq CDS 3302489 3303367 . + 0 ID=cds3104;Parent=gene3218;Dbxref=ASAP:ABE-0010382,UniProtKB/Swiss-Prot:P45475,Genbank:NP_417628.2,EcoGene:EG12791,GeneID:949117;Name=NP_417628.2;gbkey=CDS;gene=yhbV;product=U32 peptidase family protein;protein_id=NP_417628.2;transl_table=11 NC_000913.3 RefSeq gene 3303448 3304455 . + . ID=gene3219;Dbxref=EcoGene:EG12792,GeneID:947677;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;gene_synonym=ECK3148,JW3129;locus_tag=b3160 NC_000913.3 RefSeq CDS 3303448 3304455 . + 0 ID=cds3105;Parent=gene3219;Dbxref=ASAP:ABE-0010385,UniProtKB/Swiss-Prot:P0ADV5,Genbank:NP_417629.1,EcoGene:EG12792,GeneID:947677;Name=NP_417629.1;Note=putative enzyme;gbkey=CDS;gene=yhbW;product=putative luciferase-like monooxygenase;protein_id=NP_417629.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3304504 3304532 . + . ID=id402;Note=REP241 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3304573 3305817 . - . ID=gene3220;Dbxref=EcoGene:EG10617,GeneID:947675;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;gene_synonym=ECK3149,JW3130;locus_tag=b3161 NC_000913.3 RefSeq CDS 3304573 3305817 . - 0 ID=cds3106;Parent=gene3220;Dbxref=ASAP:ABE-0010387,UniProtKB/Swiss-Prot:P0AAD2,Genbank:NP_417630.1,EcoGene:EG10617,GeneID:947675;Name=NP_417630.1;Note=tryptophan-specific transport protein;gbkey=CDS;gene=mtr;product=tryptophan transporter of high affinity;protein_id=NP_417630.1;transl_table=11 NC_000913.3 RefSeq gene 3305971 3307860 . - . ID=gene3221;Dbxref=EcoGene:EG10215,GeneID:947674;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;gene_synonym=csdA,ECK3150,JW5531,mssB,rhlD;locus_tag=b3162 NC_000913.3 RefSeq CDS 3305971 3307860 . - 0 ID=cds3107;Parent=gene3221;Dbxref=ASAP:ABE-0010392,UniProtKB/Swiss-Prot:P0A9P6,Genbank:NP_417631.2,EcoGene:EG10215,GeneID:947674;Name=NP_417631.2;Note=inducible ATP-independent RNA helicase;gbkey=CDS;gene=deaD;product=ATP-dependent RNA helicase;protein_id=NP_417631.2;transl_table=11 NC_000913.3 RefSeq gene 3307853 3307933 . - . ID=gene3222;Dbxref=EcoGene:EG14490,GeneID:7751619;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;gene_synonym=ECK4500;locus_tag=b4685 NC_000913.3 RefSeq CDS 3307853 3307933 . - 0 ID=cds3108;Parent=gene3222;Dbxref=UniProtKB/Swiss-Prot:C1P618,Genbank:YP_002791258.1,EcoGene:EG14490,GeneID:7751619;Name=YP_002791258.1;gbkey=CDS;gene=yrbN;product=uncharacterized protein;protein_id=YP_002791258.1;transl_table=11 NC_000913.3 RefSeq gene 3308040 3308924 . - . ID=gene3223;Dbxref=EcoGene:EG12371,GeneID:947673;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;gene_synonym=ECK3151,JW3132,yhbM;locus_tag=b3163 NC_000913.3 RefSeq CDS 3308040 3308924 . - 0 ID=cds3109;Parent=gene3223;Dbxref=ASAP:ABE-0010395,UniProtKB/Swiss-Prot:P0AFB1,Genbank:NP_417632.1,EcoGene:EG12371,GeneID:947673;Name=NP_417632.1;gbkey=CDS;gene=nlpI;product=lipoprotein involved in osmotic sensitivity and filamentation;protein_id=NP_417632.1;transl_table=11 NC_000913.3 RefSeq gene 3309033 3311168 . - . ID=gene3224;Dbxref=EcoGene:EG10743,GeneID:947672;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;gene_synonym=bfl,ECK3152,JW5851;locus_tag=b3164 NC_000913.3 RefSeq CDS 3309033 3311168 . - 0 ID=cds3110;Parent=gene3224;Dbxref=ASAP:ABE-0010397,UniProtKB/Swiss-Prot:P05055,Genbank:NP_417633.4,EcoGene:EG10743,GeneID:947672;Name=NP_417633.4;Note=polynucleotide phosphorylase%3B cytidylate kinase activity;gbkey=CDS;gene=pnp;product=polynucleotide phosphorylase/polyadenylase;protein_id=NP_417633.4;transl_table=11 NC_000913.3 RefSeq gene 3311225 3311398 . + . ID=gene3225;Dbxref=EcoGene:EG31162,GeneID:2847685;Name=psrO;gbkey=Gene;gene=psrO;gene_biotype=ncRNA;gene_synonym=ECK3153,JWR0253,p3,psrA15,sraG;locus_tag=b4449 NC_000913.3 RefSeq ncRNA 3311225 3311398 . + . ID=rna113;Parent=gene3225;Dbxref=ASAP:ABE-0047269,EcoGene:EG31162,GeneID:2847685;Note=identified in a large scale screen;gbkey=ncRNA;gene=psrO;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 3311225 3311398 . + . ID=id403;Parent=rna113;Dbxref=ASAP:ABE-0047269,EcoGene:EG31162,GeneID:2847685;Note=identified in a large scale screen;gbkey=ncRNA;gene=psrO;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 3311415 3311684 . - . ID=gene3226;Dbxref=EcoGene:EG10914,GeneID:947686;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;gene_synonym=ECK3154,JW3134,secC;locus_tag=b3165 NC_000913.3 RefSeq CDS 3311415 3311684 . - 0 ID=cds3111;Parent=gene3226;Dbxref=ASAP:ABE-0010401,UniProtKB/Swiss-Prot:P0ADZ4,Genbank:NP_417634.1,EcoGene:EG10914,GeneID:947686;Name=NP_417634.1;gbkey=CDS;gene=rpsO;product=30S ribosomal subunit protein S15;protein_id=NP_417634.1;transl_table=11 NC_000913.3 RefSeq gene 3311833 3312777 . - . ID=gene3227;Dbxref=EcoGene:EG11177,GeneID:947687;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;gene_synonym=ECK3155,JW3135,yhbA;locus_tag=b3166 NC_000913.3 RefSeq CDS 3311833 3312777 . - 0 ID=cds3112;Parent=gene3227;Dbxref=ASAP:ABE-0010404,UniProtKB/Swiss-Prot:P60340,Genbank:NP_417635.1,EcoGene:EG11177,GeneID:947687;Name=NP_417635.1;Note=tRNA pseudouridine 5S synthase;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase;protein_id=NP_417635.1;transl_table=11 NC_000913.3 RefSeq gene 3312777 3313178 . - . ID=gene3228;Dbxref=EcoGene:EG11178,GeneID:947685;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;gene_synonym=ECK3156,JW3136,sdr-43,yhbB;locus_tag=b3167 NC_000913.3 RefSeq CDS 3312777 3313178 . - 0 ID=cds3113;Parent=gene3228;Dbxref=ASAP:ABE-0010406,UniProtKB/Swiss-Prot:P0A7G2,Genbank:NP_417636.1,EcoGene:EG11178,GeneID:947685;Name=NP_417636.1;Note=ribosome-binding factor A;gbkey=CDS;gene=rbfA;product=30s ribosome binding factor;protein_id=NP_417636.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3313252 3313328 . + . ID=id404;Note=REP242 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3313342 3316014 . - . ID=gene3229;Dbxref=EcoGene:EG10505,GeneID:947684;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;gene_synonym=ECK3157,gicD,JW3137,ssyG;locus_tag=b3168 NC_000913.3 RefSeq CDS 3313342 3316014 . - 0 ID=cds3114;Parent=gene3229;Dbxref=ASAP:ABE-0010410,UniProtKB/Swiss-Prot:P0A705,Genbank:NP_417637.1,EcoGene:EG10505,GeneID:947684;Name=NP_417637.1;Note=protein chain initiation factor IF-2;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=NP_417637.1;transl_table=11 NC_000913.3 RefSeq gene 3316039 3317526 . - . ID=gene3230;Dbxref=EcoGene:EG10665,GeneID:947682;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;gene_synonym=ECK3158,JW3138;locus_tag=b3169 NC_000913.3 RefSeq CDS 3316039 3317526 . - 0 ID=cds3115;Parent=gene3230;Dbxref=ASAP:ABE-0010413,UniProtKB/Swiss-Prot:P0AFF6,Genbank:NP_417638.1,EcoGene:EG10665,GeneID:947682;Name=NP_417638.1;Note=transcription pausing%3B L factor;gbkey=CDS;gene=nusA;product=transcription termination/antitermination L factor;protein_id=NP_417638.1;transl_table=11 NC_000913.3 RefSeq gene 3317554 3318006 . - . ID=gene3231;Dbxref=EcoGene:EG11179,GeneID:947680;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;gene_synonym=ECK3159,JW5533,yhbC;locus_tag=b3170 NC_000913.3 RefSeq CDS 3317554 3318006 . - 0 ID=cds3116;Parent=gene3231;Dbxref=ASAP:ABE-0010417,UniProtKB/Swiss-Prot:P0A8A8,Genbank:NP_417639.6,EcoGene:EG11179,GeneID:947680;Name=NP_417639.6;gbkey=CDS;gene=rimP;product=ribosome maturation factor for 30S subunits;protein_id=NP_417639.6;transl_table=11 NC_000913.3 RefSeq gene 3318213 3318289 . - . ID=gene3232;Dbxref=EcoGene:EG30061,GeneID:947678;Name=metY;gbkey=Gene;gene=metY;gene_biotype=tRNA;gene_synonym=ECK3160,JWR0071;locus_tag=b3171 NC_000913.3 RefSeq tRNA 3318213 3318289 . - . ID=rna114;Parent=gene3232;Dbxref=ASAP:ABE-0010420,EcoGene:EG30061,GeneID:947678;Note=anticodon: CAU;gbkey=tRNA;gene=metY;product=tRNA-Met NC_000913.3 RefSeq exon 3318213 3318289 . - . ID=id405;Parent=rna114;Dbxref=ASAP:ABE-0010420,EcoGene:EG30061,GeneID:947678;Note=anticodon: CAU;gbkey=tRNA;gene=metY;product=tRNA-Met NC_000913.3 RefSeq gene 3318637 3319980 . + . ID=gene3233;Dbxref=EcoGene:EG10068,GeneID:947590;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;gene_synonym=Arg6,argE,ECK3161,JW3140;locus_tag=b3172 NC_000913.3 RefSeq CDS 3318637 3319980 . + 0 ID=cds3117;Parent=gene3233;Dbxref=ASAP:ABE-0010428,UniProtKB/Swiss-Prot:P0A6E4,Genbank:NP_417640.1,EcoGene:EG10068,GeneID:947590;Name=NP_417640.1;gbkey=CDS;gene=argG;product=argininosuccinate synthetase;protein_id=NP_417640.1;transl_table=11 NC_000913.3 RefSeq gene 3319988 3321613 . - . ID=gene3234;Dbxref=EcoGene:EG12793,GeneID:947711;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;gene_synonym=ECK3162,JW5534;locus_tag=b3173 NC_000913.3 RefSeq CDS 3319988 3321613 . - 0 ID=cds3118;Parent=gene3234;Dbxref=ASAP:ABE-0010430,UniProtKB/Swiss-Prot:P42640,Genbank:NP_417641.4,EcoGene:EG12793,GeneID:947711;Name=NP_417641.4;Note=putative alkaline phosphatase I;gbkey=CDS;gene=yhbX;product=putative EptAB family phosphoethanolamine transferase%2C inner membrane protein;protein_id=NP_417641.4;transl_table=11 NC_000913.3 RefSeq gene 3322072 3322158 . - . ID=gene3235;Dbxref=EcoGene:EG30050,GeneID:947505;Name=leuU;gbkey=Gene;gene=leuU;gene_biotype=tRNA;gene_synonym=ECK3163,JWR0072;locus_tag=b3174 NC_000913.3 RefSeq tRNA 3322072 3322158 . - . ID=rna115;Parent=gene3235;Dbxref=ASAP:ABE-0010434,EcoGene:EG30050,GeneID:947505;Note=anticodon: UAG;gbkey=tRNA;gene=leuU;product=tRNA-Leu NC_000913.3 RefSeq exon 3322072 3322158 . - . ID=id406;Parent=rna115;Dbxref=ASAP:ABE-0010434,EcoGene:EG30050,GeneID:947505;Note=anticodon: UAG;gbkey=tRNA;gene=leuU;product=tRNA-Leu NC_000913.3 RefSeq gene 3322173 3322505 . - . ID=gene3236;Dbxref=EcoGene:EG12095,GeneID:947720;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;gene_synonym=ECK3164,JW3142,prlH;locus_tag=b3175 NC_000913.3 RefSeq CDS 3322173 3322505 . - 0 ID=cds3119;Parent=gene3236;Dbxref=ASAP:ABE-0010436,UniProtKB/Swiss-Prot:P0AG99,Genbank:NP_417642.1,EcoGene:EG12095,GeneID:947720;Name=NP_417642.1;Note=protein export - membrane protein;gbkey=CDS;gene=secG;product=preprotein translocase membrane subunit;protein_id=NP_417642.1;transl_table=11 NC_000913.3 RefSeq gene 3322733 3324070 . - . ID=gene3237;Dbxref=EcoGene:EG11553,GeneID:947692;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;gene_synonym=ECK3165,JW3143,mrsA,yhbF;locus_tag=b3176 NC_000913.3 RefSeq CDS 3322733 3324070 . - 0 ID=cds3120;Parent=gene3237;Dbxref=ASAP:ABE-0010439,UniProtKB/Swiss-Prot:P31120,Genbank:NP_417643.1,EcoGene:EG11553,GeneID:947692;Name=NP_417643.1;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=NP_417643.1;transl_table=11 NC_000913.3 RefSeq gene 3324063 3324911 . - . ID=gene3238;Dbxref=EcoGene:EG50011,GeneID:947691;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;gene_synonym=dhpS,ECK3166,JW3144;locus_tag=b3177 NC_000913.3 RefSeq CDS 3324063 3324911 . - 0 ID=cds3121;Parent=gene3238;Dbxref=ASAP:ABE-0010441,UniProtKB/Swiss-Prot:P0AC13,Genbank:NP_417644.4,EcoGene:EG50011,GeneID:947691;Name=NP_417644.4;gbkey=CDS;gene=folP;product=7%2C8-dihydropteroate synthase;protein_id=NP_417644.4;transl_table=11 NC_000913.3 RefSeq gene 3325001 3326935 . - . ID=gene3239;Dbxref=EcoGene:EG11506,GeneID:947690;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=ECK3167,hflB,JW3145,mrsC,std,tolZ;locus_tag=b3178 NC_000913.3 RefSeq CDS 3325001 3326935 . - 0 ID=cds3122;Parent=gene3239;Dbxref=ASAP:ABE-0010444,UniProtKB/Swiss-Prot:P0AAI3,Genbank:NP_417645.1,EcoGene:EG11506,GeneID:947690;Name=NP_417645.1;gbkey=CDS;gene=ftsH;product=protease%2C ATP-dependent zinc-metallo;protein_id=NP_417645.1;transl_table=11 NC_000913.3 RefSeq gene 3327035 3327664 . - . ID=gene3240;Dbxref=EcoGene:EG11507,GeneID:947689;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;gene_synonym=ECK3168,ftsJ,JW3146,mrsF,rrmJ;locus_tag=b3179 NC_000913.3 RefSeq CDS 3327035 3327664 . - 0 ID=cds3123;Parent=gene3240;Dbxref=ASAP:ABE-0010447,UniProtKB/Swiss-Prot:P0C0R7,Genbank:NP_417646.1,EcoGene:EG11507,GeneID:947689;Name=NP_417646.1;gbkey=CDS;gene=rlmE;product=23S rRNA U2552 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=NP_417646.1;transl_table=11 NC_000913.3 RefSeq gene 3327790 3328083 . + . ID=gene3241;Dbxref=EcoGene:EG12794,GeneID:947688;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;gene_synonym=ECK3169,JW3147;locus_tag=b3180 NC_000913.3 RefSeq CDS 3327790 3328083 . + 0 ID=cds3124;Parent=gene3241;Dbxref=ASAP:ABE-0010452,UniProtKB/Swiss-Prot:P0AGK4,Genbank:NP_417647.1,EcoGene:EG12794,GeneID:947688;Name=NP_417647.1;gbkey=CDS;gene=yhbY;product=RNA binding protein associated with pre-50S ribosomal subunits;protein_id=NP_417647.1;transl_table=11 NC_000913.3 RefSeq gene 3328239 3328715 . - . ID=gene3242;Dbxref=EcoGene:EG10415,GeneID:947696;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;gene_synonym=ECK3170,JW3148;locus_tag=b3181 NC_000913.3 RefSeq CDS 3328239 3328715 . - 0 ID=cds3125;Parent=gene3242;Dbxref=ASAP:ABE-0010454,UniProtKB/Swiss-Prot:P0A6W5,Genbank:NP_417648.4,EcoGene:EG10415,GeneID:947696;Name=NP_417648.4;Note=transcription elongation factor: cleaves 3' nucleotide of paused mRNA;gbkey=CDS;gene=greA;product=transcript cleavage factor;protein_id=NP_417648.4;transl_table=11 NC_000913.3 RefSeq gene 3328963 3330396 . + . ID=gene3243;Dbxref=EcoGene:EG10202,GeneID:947693;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;gene_synonym=ECK3171,JW3149;locus_tag=b3182 NC_000913.3 RefSeq CDS 3328963 3330396 . + 0 ID=cds3126;Parent=gene3243;Dbxref=ASAP:ABE-0010458,UniProtKB/Swiss-Prot:P24228,Genbank:NP_417649.1,EcoGene:EG10202,GeneID:947693;Name=NP_417649.1;Note=D-alanyl-D-alanine carboxypeptidase%2C fraction B%3B penicillin-binding protein 4;gbkey=CDS;gene=dacB;product=D-alanyl-D-alanine carboxypeptidase;protein_id=NP_417649.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3330460 3330557 . + . ID=id407;Note=RIP243 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3330582 3331754 . - . ID=gene3244;Dbxref=EcoGene:EG12795,GeneID:947694;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,ECK3172,JW3150,obg,yhbZ;locus_tag=b3183 NC_000913.3 RefSeq CDS 3330582 3331754 . - 0 ID=cds3127;Parent=gene3244;Dbxref=ASAP:ABE-0010462,UniProtKB/Swiss-Prot:P42641,Genbank:NP_417650.1,EcoGene:EG12795,GeneID:947694;Name=NP_417650.1;Note=putative GTP-binding factor;gbkey=CDS;gene=obgE;product=GTPase involved in cell partioning and DNA repair;protein_id=NP_417650.1;transl_table=11 NC_000913.3 RefSeq gene 3331770 3332735 . - . ID=gene3245;Dbxref=EcoGene:EG11499,GeneID:947699;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;gene_synonym=ECK3173,JW3151;locus_tag=b3184 NC_000913.3 RefSeq CDS 3331770 3332735 . - 0 ID=cds3128;Parent=gene3245;Dbxref=ASAP:ABE-0010464,UniProtKB/Swiss-Prot:P0AA73,Genbank:NP_417651.1,EcoGene:EG11499,GeneID:947699;Name=NP_417651.1;gbkey=CDS;gene=yhbE;product=EamA family inner membrane putative transporter;protein_id=NP_417651.1;transl_table=11 NC_000913.3 RefSeq gene 3332862 3333119 . - . ID=gene3246;Dbxref=EcoGene:EG50002,GeneID:945190;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;gene_synonym=ECK3174,JW3152,rpz;locus_tag=b3185 NC_000913.3 RefSeq CDS 3332862 3333119 . - 0 ID=cds3129;Parent=gene3246;Dbxref=ASAP:ABE-0010468,UniProtKB/Swiss-Prot:P0A7L8,Genbank:NP_417652.1,EcoGene:EG50002,GeneID:945190;Name=NP_417652.1;gbkey=CDS;gene=rpmA;product=50S ribosomal subunit protein L27;protein_id=NP_417652.1;transl_table=11 NC_000913.3 RefSeq gene 3333140 3333451 . - . ID=gene3247;Dbxref=EcoGene:EG50001,GeneID:949057;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;gene_synonym=ECK3175,JW3153;locus_tag=b3186 NC_000913.3 RefSeq CDS 3333140 3333451 . - 0 ID=cds3130;Parent=gene3247;Dbxref=ASAP:ABE-0010470,UniProtKB/Swiss-Prot:P0AG48,Genbank:NP_417653.1,EcoGene:EG50001,GeneID:949057;Name=NP_417653.1;gbkey=CDS;gene=rplU;product=50S ribosomal subunit protein L21;protein_id=NP_417653.1;transl_table=11 NC_000913.3 RefSeq gene 3333710 3334681 . + . ID=gene3248;Dbxref=EcoGene:EG10017,GeneID:947364;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;gene_synonym=cel,ECK3176,JW3154,yhbD;locus_tag=b3187 NC_000913.3 RefSeq CDS 3333710 3334681 . + 0 ID=cds3131;Parent=gene3248;Dbxref=ASAP:ABE-0010474,UniProtKB/Swiss-Prot:P0AD57,Genbank:NP_417654.1,EcoGene:EG10017,GeneID:947364;Name=NP_417654.1;gbkey=CDS;gene=ispB;product=octaprenyl diphosphate synthase;protein_id=NP_417654.1;transl_table=11 NC_000913.3 RefSeq gene 3334909 3335187 . + . ID=gene3249;Dbxref=EcoGene:EG10656,GeneID:947960;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;gene_synonym=ECK3177,JW3155,nlp,sfs7;locus_tag=b3188 NC_000913.3 RefSeq CDS 3334909 3335187 . + 0 ID=cds3132;Parent=gene3249;Dbxref=ASAP:ABE-0010477,UniProtKB/Swiss-Prot:P0ACH1,Genbank:NP_417655.1,EcoGene:EG10656,GeneID:947960;Name=NP_417655.1;Note=regulatory factor of maltose metabolism%3B similar to Ner repressor protein of phage Mu;gbkey=CDS;gene=sfsB;product=malPQ operon transcriptional activator;protein_id=NP_417655.1;transl_table=11 NC_000913.3 RefSeq gene 3335235 3336494 . - . ID=gene3250;Dbxref=EcoGene:EG11358,GeneID:947703;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=ECK3178,JW3156,mrbA,murZ;locus_tag=b3189 NC_000913.3 RefSeq CDS 3335235 3336494 . - 0 ID=cds3133;Parent=gene3250;Dbxref=ASAP:ABE-0010479,UniProtKB/Swiss-Prot:P0A749,Genbank:NP_417656.1,EcoGene:EG11358,GeneID:947703;Name=NP_417656.1;Note=first step in murein biosynthesis%3BUDP-N-glucosamine 1-carboxyvinyltransferase;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=NP_417656.1;transl_table=11 NC_000913.3 RefSeq gene 3336549 3336803 . - . ID=gene3251;Dbxref=EcoGene:EG12796,GeneID:947958;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;gene_synonym=ECK3179,JW3157,yrbA;locus_tag=b3190 NC_000913.3 RefSeq CDS 3336549 3336803 . - 0 ID=cds3134;Parent=gene3251;Dbxref=ASAP:ABE-0010481,UniProtKB/Swiss-Prot:P0A9W6,Genbank:NP_417657.2,EcoGene:EG12796,GeneID:947958;Name=NP_417657.2;gbkey=CDS;gene=ibaG;product=acid stress protein%3B putative BolA family transcriptional regulator;protein_id=NP_417657.2;transl_table=11 NC_000913.3 RefSeq repeat_region 3336919 3336952 . + . ID=id408;Note=REP244 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3336963 3337256 . - . ID=gene3252;Dbxref=EcoGene:EG12797,GeneID:947954;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;gene_synonym=ECK3180,JW5535,yrbB;locus_tag=b3191 NC_000913.3 RefSeq CDS 3336963 3337256 . - 0 ID=cds3135;Parent=gene3252;Dbxref=ASAP:ABE-0010487,UniProtKB/Swiss-Prot:P64602,Genbank:NP_417658.4,EcoGene:EG12797,GeneID:947954;Name=NP_417658.4;gbkey=CDS;gene=mlaB;product=ABC transporter maintaining OM lipid asymmetry%2C cytoplasmic STAS component;protein_id=NP_417658.4;transl_table=11 NC_000913.3 RefSeq gene 3337256 3337891 . - . ID=gene3253;Dbxref=EcoGene:EG12798,GeneID:947710;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;gene_synonym=ECK3181,JW3159,yrbC;locus_tag=b3192 NC_000913.3 RefSeq CDS 3337256 3337891 . - 0 ID=cds3136;Parent=gene3253;Dbxref=ASAP:ABE-0010489,UniProtKB/Swiss-Prot:P0ADV7,Genbank:NP_417659.1,EcoGene:EG12798,GeneID:947710;Name=NP_417659.1;gbkey=CDS;gene=mlaC;product=ABC transporter maintaining OM lipid asymmetry%2C periplasmic binding protein;protein_id=NP_417659.1;transl_table=11 NC_000913.3 RefSeq gene 3337910 3338461 . - . ID=gene3254;Dbxref=EcoGene:EG12799,GeneID:947712;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;gene_synonym=ECK3182,JW3160,vpsC,yrbD;locus_tag=b3193 NC_000913.3 RefSeq CDS 3337910 3338461 . - 0 ID=cds3137;Parent=gene3254;Dbxref=ASAP:ABE-0010493,UniProtKB/Swiss-Prot:P64604,Genbank:NP_417660.1,EcoGene:EG12799,GeneID:947712;Name=NP_417660.1;gbkey=CDS;gene=mlaD;product=OM lipid asymmetry maintenance protein%3B membrane-anchored ABC family periplasmic binding protein;protein_id=NP_417660.1;transl_table=11 NC_000913.3 RefSeq gene 3338466 3339248 . - . ID=gene3255;Dbxref=EcoGene:EG12800,GeneID:947732;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;gene_synonym=ECK3183,JW3161,vpsB,yrbE;locus_tag=b3194 NC_000913.3 RefSeq CDS 3338466 3339248 . - 0 ID=cds3138;Parent=gene3255;Dbxref=ASAP:ABE-0010495,UniProtKB/Swiss-Prot:P64606,Genbank:NP_417661.1,EcoGene:EG12800,GeneID:947732;Name=NP_417661.1;gbkey=CDS;gene=mlaE;product=ABC transporter maintaining OM lipid asymmetry%2C inner membrane permease protein;protein_id=NP_417661.1;transl_table=11 NC_000913.3 RefSeq gene 3339256 3340065 . - . ID=gene3256;Dbxref=EcoGene:EG12801,GeneID:947729;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;gene_synonym=ECK3184,JW3162,vpsA,yrbF;locus_tag=b3195 NC_000913.3 RefSeq CDS 3339256 3340065 . - 0 ID=cds3139;Parent=gene3256;Dbxref=ASAP:ABE-0010498,UniProtKB/Swiss-Prot:P63386,Genbank:NP_417662.1,EcoGene:EG12801,GeneID:947729;Name=NP_417662.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=mlaF;product=ABC transporter maintaining OM lipid asymmetry%2C ATP-binding protein;protein_id=NP_417662.1;transl_table=11 NC_000913.3 RefSeq gene 3340275 3341252 . + . ID=gene3257;Dbxref=EcoGene:EG12802,GeneID:947730;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;gene_synonym=ECK3185,JW3163;locus_tag=b3196 NC_000913.3 RefSeq CDS 3340275 3341252 . + 0 ID=cds3140;Parent=gene3257;Dbxref=ASAP:ABE-0010502,UniProtKB/Swiss-Prot:P45394,Genbank:NP_417663.1,EcoGene:EG12802,GeneID:947730;Name=NP_417663.1;gbkey=CDS;gene=yrbG;product=putative calcium/sodium:proton antiporter;protein_id=NP_417663.1;transl_table=11 NC_000913.3 RefSeq gene 3341266 3342252 . + . ID=gene3258;Dbxref=EcoGene:EG12803,GeneID:947734;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;gene_synonym=ECK3186,JW3164,yrbH;locus_tag=b3197 NC_000913.3 RefSeq CDS 3341266 3342252 . + 0 ID=cds3141;Parent=gene3258;Dbxref=ASAP:ABE-0010504,UniProtKB/Swiss-Prot:P45395,Genbank:NP_417664.1,EcoGene:EG12803,GeneID:947734;Name=NP_417664.1;Note=putative isomerase;gbkey=CDS;gene=kdsD;product=D-arabinose 5-phosphate isomerase;protein_id=NP_417664.1;transl_table=11 NC_000913.3 RefSeq gene 3342273 3342839 . + . ID=gene3259;Dbxref=EcoGene:EG12804,GeneID:947717;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;gene_synonym=ECK3187,JW3165,yrbI,yrbJ;locus_tag=b3198 NC_000913.3 RefSeq CDS 3342273 3342839 . + 0 ID=cds3142;Parent=gene3259;Dbxref=ASAP:ABE-0010506,UniProtKB/Swiss-Prot:P0ABZ4,Genbank:NP_417665.1,EcoGene:EG12804,GeneID:947717;Name=NP_417665.1;gbkey=CDS;gene=kdsC;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=NP_417665.1;transl_table=11 NC_000913.3 RefSeq gene 3342836 3343411 . + . ID=gene3260;Dbxref=EcoGene:EG12806,GeneID:947722;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;gene_synonym=ECK3188,JW3166,yrbK;locus_tag=b3199 NC_000913.3 RefSeq CDS 3342836 3343411 . + 0 ID=cds3143;Parent=gene3260;Dbxref=ASAP:ABE-0010508,UniProtKB/Swiss-Prot:P0ADV9,Genbank:NP_417666.1,EcoGene:EG12806,GeneID:947722;Name=NP_417666.1;gbkey=CDS;gene=lptC;product=periplasmic membrane-anchored LPS-binding protein%3B LPS export protein;protein_id=NP_417666.1;transl_table=11 NC_000913.3 RefSeq gene 3343380 3343937 . + . ID=gene3261;Dbxref=EcoGene:EG12618,GeneID:947920;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;gene_synonym=ECK3189,JW3167,yhbN;locus_tag=b3200 NC_000913.3 RefSeq CDS 3343380 3343937 . + 0 ID=cds3144;Parent=gene3261;Dbxref=ASAP:ABE-0010510,UniProtKB/Swiss-Prot:P0ADV1,Genbank:NP_417667.1,EcoGene:EG12618,GeneID:947920;Name=NP_417667.1;gbkey=CDS;gene=lptA;product=lipopolysaccharide export ABC transporter periplasmic binding protein%3B Lipid A binding protein%3B LPS export and assembly protein;protein_id=NP_417667.1;transl_table=11 NC_000913.3 RefSeq gene 3343944 3344669 . + . ID=gene3262;Dbxref=EcoGene:EG11680,GeneID:947725;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;gene_synonym=ECK3190,JW3168,yhbG;locus_tag=b3201 NC_000913.3 RefSeq CDS 3343944 3344669 . + 0 ID=cds3145;Parent=gene3262;Dbxref=ASAP:ABE-0010512,UniProtKB/Swiss-Prot:P0A9V1,Genbank:NP_417668.1,EcoGene:EG11680,GeneID:947725;Name=NP_417668.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=lptB;product=lipopolysaccharide export ABC transporter ATPase;protein_id=NP_417668.1;transl_table=11 NC_000913.3 RefSeq gene 3344717 3346150 . + . ID=gene3263;Dbxref=EcoGene:EG10898,GeneID:947714;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;gene_synonym=ECK3191,glnF,JW3169,ntrA;locus_tag=b3202 NC_000913.3 RefSeq CDS 3344717 3346150 . + 0 ID=cds3146;Parent=gene3263;Dbxref=ASAP:ABE-0010514,UniProtKB/Swiss-Prot:P24255,Genbank:NP_417669.1,EcoGene:EG10898,GeneID:947714;Name=NP_417669.1;Note=RNA polymerase%2C sigma(54 or 60) factor%3B nitrogen and fermentation regulation;gbkey=CDS;gene=rpoN;product=RNA polymerase%2C sigma 54 (sigma N) factor;protein_id=NP_417669.1;transl_table=11 NC_000913.3 RefSeq gene 3346173 3346460 . + . ID=gene3264;Dbxref=EcoGene:EG11681,GeneID:947718;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;gene_synonym=ECK3192,JW3170,yhbH;locus_tag=b3203 NC_000913.3 RefSeq CDS 3346173 3346460 . + 0 ID=cds3147;Parent=gene3264;Dbxref=ASAP:ABE-0010516,UniProtKB/Swiss-Prot:P0AFX0,Genbank:NP_417670.1,EcoGene:EG11681,GeneID:947718;Name=NP_417670.1;Note=probable sigma-54 modulation protein;gbkey=CDS;gene=hpf;product=ribosome hibernation promoting factor HPF%3B stabilizes 100S dimers;protein_id=NP_417670.1;transl_table=11 NC_000913.3 RefSeq gene 3346578 3347069 . + . ID=gene3265;Dbxref=EcoGene:EG11682,GeneID:947721;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;gene_synonym=ECK3193,JW3171,rpoP,yhbI;locus_tag=b3204 NC_000913.3 RefSeq CDS 3346578 3347069 . + 0 ID=cds3148;Parent=gene3265;Dbxref=ASAP:ABE-0010520,UniProtKB/Swiss-Prot:P69829,Genbank:NP_417671.1,EcoGene:EG11682,GeneID:947721;Name=NP_417671.1;Note=phosphotransferase system enzyme IIA%2C regulates N metabolism;gbkey=CDS;gene=ptsN;product=sugar-specific enzyme IIA component of PTS;protein_id=NP_417671.1;transl_table=11 NC_000913.3 RefSeq gene 3347115 3347969 . + . ID=gene3266;Dbxref=EcoGene:EG12146,GeneID:947727;Name=yhbJ;gbkey=Gene;gene=yhbJ;gene_biotype=protein_coding;gene_synonym=ECK3194,JW3172,rapZ;locus_tag=b3205 NC_000913.3 RefSeq CDS 3347115 3347969 . + 0 ID=cds3149;Parent=gene3266;Dbxref=ASAP:ABE-0010522,UniProtKB/Swiss-Prot:P0A894,Genbank:NP_417672.1,EcoGene:EG12146,GeneID:947727;Name=NP_417672.1;gbkey=CDS;gene=yhbJ;product=adaptor protein for GlmZ/GlmY sRNA decay%2C glucosamine-6-phosphate-regulated%3B NTPase;protein_id=NP_417672.1;transl_table=11 NC_000913.3 RefSeq gene 3347966 3348238 . + . ID=gene3267;Dbxref=EcoGene:EG12147,GeneID:947914;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;gene_synonym=ECK3195,JW3173,ptsO,rpoR,yhbK;locus_tag=b3206 NC_000913.3 RefSeq CDS 3347966 3348238 . + 0 ID=cds3150;Parent=gene3267;Dbxref=ASAP:ABE-0010524,UniProtKB/Swiss-Prot:P0A9N0,Genbank:NP_417673.1,EcoGene:EG12147,GeneID:947914;Name=NP_417673.1;Note=phosphocarrier protein HPr-like NPr%2C nitrogen related%2C exchanges phosphate with Enzyme I%2C Hpr;gbkey=CDS;gene=npr;product=phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr);protein_id=NP_417673.1;transl_table=11 NC_000913.3 RefSeq gene 3348452 3349084 . + . ID=gene3268;Dbxref=EcoGene:EG12807,GeneID:947910;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;gene_synonym=ECK3196,JW3174;locus_tag=b3207 NC_000913.3 RefSeq CDS 3348452 3349084 . + 0 ID=cds3151;Parent=gene3268;Dbxref=ASAP:ABE-0010528,UniProtKB/Swiss-Prot:P64610,Genbank:NP_417674.1,EcoGene:EG12807,GeneID:947910;Name=NP_417674.1;gbkey=CDS;gene=yrbL;product=Mg(2+)-starvation-stimulated protein;protein_id=NP_417674.1;transl_table=11 NC_000913.3 RefSeq gene 3349081 3349809 . - . ID=gene3269;Dbxref=EcoGene:EG12808,GeneID:947728;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;gene_synonym=ECK3197,JW3175,mgt,yrbM;locus_tag=b3208 NC_000913.3 RefSeq CDS 3349081 3349809 . - 0 ID=cds3152;Parent=gene3269;Dbxref=ASAP:ABE-0010530,UniProtKB/Swiss-Prot:P46022,Genbank:NP_417675.1,EcoGene:EG12808,GeneID:947728;Name=NP_417675.1;Note=putative peptidoglycan enzyme;gbkey=CDS;gene=mtgA;product=biosynthetic peptidoglycan transglycosylase;protein_id=NP_417675.1;transl_table=11 NC_000913.3 RefSeq gene 3349806 3350459 . - . ID=gene3270;Dbxref=EcoGene:EG11383,GeneID:947903;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;gene_synonym=ECK3198,elb2,JW3176,yhbL,yzzB;locus_tag=b3209 NC_000913.3 RefSeq CDS 3349806 3350459 . - 0 ID=cds3153;Parent=gene3270;Dbxref=ASAP:ABE-0010532,UniProtKB/Swiss-Prot:P0ABU5,Genbank:NP_417676.2,EcoGene:EG11383,GeneID:947903;Name=NP_417676.2;Note=sigma cross-reacting protein 27A (SCRP-27A);gbkey=CDS;gene=elbB;product=isoprenoid biosynthesis protein with amidotransferase-like domain;protein_id=NP_417676.2;transl_table=11 NC_000913.3 RefSeq gene 3350577 3350697 . + . ID=gene3271;Dbxref=EcoGene:EG31163,GeneID:2847690;Name=arcZ;gbkey=Gene;gene=arcZ;gene_biotype=antisense_RNA;gene_synonym=ECK3199,JWR0254,psrA16,ryhA,sraH;locus_tag=b4450 NC_000913.3 RefSeq ncRNA 3350577 3350697 . + . ID=rna116;Parent=gene3271;Dbxref=ASAP:ABE-0047270,EcoGene:EG31163,GeneID:2847690;Note=identified in a large scale screen;gbkey=ncRNA;gene=arcZ;ncrna_class=antisense_RNA;product=sRNA positive antisense regulator of rpoS%3B binds Hfq NC_000913.3 RefSeq exon 3350577 3350697 . + . ID=id409;Parent=rna116;Dbxref=ASAP:ABE-0047270,EcoGene:EG31163,GeneID:2847690;Note=identified in a large scale screen;gbkey=ncRNA;gene=arcZ;ncrna_class=antisense_RNA;product=sRNA positive antisense regulator of rpoS%3B binds Hfq NC_000913.3 RefSeq gene 3350689 3353025 . - . ID=gene3272;Dbxref=EcoGene:EG10062,GeneID:947887;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;gene_synonym=ECK3200,JW5536;locus_tag=b3210 NC_000913.3 RefSeq CDS 3350689 3353025 . - 0 ID=cds3154;Parent=gene3272;Dbxref=ASAP:ABE-0010537,UniProtKB/Swiss-Prot:P0AEC3,Genbank:YP_026207.1,EcoGene:EG10062,GeneID:947887;Name=YP_026207.1;Note=aerobic respiration sensor-response protein%3B histidine protein kinase/phosphatase%2C sensor for arcA;gbkey=CDS;gene=arcB;product=aerobic respiration control sensor histidine protein kinase%2C cognate to two-component response regulators ArcA and RssB;protein_id=YP_026207.1;transl_table=11 NC_000913.3 RefSeq gene 3353121 3354050 . - . ID=gene3273;Dbxref=EcoGene:EG12809,GeneID:947733;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;gene_synonym=ECK3201,JW3178;locus_tag=b3211 NC_000913.3 RefSeq CDS 3353121 3354050 . - 0 ID=cds3155;Parent=gene3273;Dbxref=ASAP:ABE-0010540,UniProtKB/Swiss-Prot:P0ADW6,Genbank:NP_417678.1,EcoGene:EG12809,GeneID:947733;Name=NP_417678.1;gbkey=CDS;gene=yhcC;product=putative Fe-S oxidoreductase%2C Radical SAM superfamily protein;protein_id=NP_417678.1;transl_table=11 NC_000913.3 RefSeq gene 3354725 3359185 . + . ID=gene3274;Dbxref=EcoGene:EG10403,GeneID:947724;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;gene_synonym=aspB,ECK3202,JW3179,ossB,psiQ;locus_tag=b3212 NC_000913.3 RefSeq CDS 3354725 3359185 . + 0 ID=cds3156;Parent=gene3274;Dbxref=ASAP:ABE-0010545,UniProtKB/Swiss-Prot:P09831,Genbank:NP_417679.2,EcoGene:EG10403,GeneID:947724;Name=NP_417679.2;gbkey=CDS;gene=gltB;product=glutamate synthase%2C large subunit;protein_id=NP_417679.2;transl_table=11 NC_000913.3 RefSeq gene 3359198 3360616 . + . ID=gene3275;Dbxref=EcoGene:EG10404,GeneID:947723;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;gene_synonym=aspB,ECK3203,JW3180,ossB,psiQ;locus_tag=b3213 NC_000913.3 RefSeq CDS 3359198 3360616 . + 0 ID=cds3157;Parent=gene3275;Dbxref=ASAP:ABE-0010547,UniProtKB/Swiss-Prot:P09832,Genbank:NP_417680.1,EcoGene:EG10404,GeneID:947723;Name=NP_417680.1;Note=glutamate synthase%2C small subunit;gbkey=CDS;gene=gltD;product=glutamate synthase%2C 4Fe-4S protein%2C small subunit;protein_id=NP_417680.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3360688 3360786 . + . ID=id410;Note=RIP51 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3361176 3361940 . + . ID=gene3276;Dbxref=EcoGene:EG11514,GeneID:947746;Name=gltF;gbkey=Gene;gene=gltF;gene_biotype=protein_coding;gene_synonym=ECK3204,JW3181,ossB;locus_tag=b3214 NC_000913.3 RefSeq CDS 3361176 3361940 . + 0 ID=cds3158;Parent=gene3276;Dbxref=ASAP:ABE-0010549,UniProtKB/Swiss-Prot:P28721,Genbank:NP_417681.1,EcoGene:EG11514,GeneID:947746;Name=NP_417681.1;Note=regulator of gltBDF operon%2C induction of Ntr enzymes;gbkey=CDS;gene=gltF;product=periplasmic protein;protein_id=NP_417681.1;transl_table=11 NC_000913.3 RefSeq gene 3362112 3362786 . + . ID=gene3277;Dbxref=EcoGene:EG11515,GeneID:947741;Name=yhcA;gbkey=Gene;gene=yhcA;gene_biotype=protein_coding;gene_synonym=ECK3205,JW3182;locus_tag=b3215 NC_000913.3 RefSeq CDS 3362112 3362786 . + 0 ID=cds3159;Parent=gene3277;Dbxref=ASAP:ABE-0010552,UniProtKB/Swiss-Prot:P28722,Genbank:NP_417682.1,EcoGene:EG11515,GeneID:947741;Name=NP_417682.1;Note=putative chaperone;gbkey=CDS;gene=yhcA;product=putative periplasmic chaperone protein;protein_id=NP_417682.1;transl_table=11 NC_000913.3 RefSeq gene 3362807 3365188 . + . ID=gene3278;Dbxref=EcoGene:EG12810,GeneID:947738;Name=yhcD;gbkey=Gene;gene=yhcD;gene_biotype=protein_coding;gene_synonym=ECK3206,JW3183;locus_tag=b3216 NC_000913.3 RefSeq CDS 3362807 3365188 . + 0 ID=cds3160;Parent=gene3278;Dbxref=ASAP:ABE-0010554,UniProtKB/Swiss-Prot:P45420,Genbank:NP_417683.1,EcoGene:EG12810,GeneID:947738;Name=NP_417683.1;Note=putative outer membrane protein;gbkey=CDS;gene=yhcD;product=putative outer membrane fimbrial subunit usher protein;protein_id=NP_417683.1;transl_table=11 NC_000913.3 RefSeq gene 3365185 3365551 . + . ID=gene3279;Dbxref=EcoGene:EG12811,GeneID:4056032;Name=yhcE;gbkey=Gene;gene=yhcE;gene_biotype=pseudogene;gene_synonym=ECK3207,JW3184,JW3187;locus_tag=b4569;part=1/2;pseudo=true NC_000913.3 RefSeq gene 3366751 3366929 . + . ID=gene3279;Dbxref=EcoGene:EG12811,GeneID:4056032;Name=yhcE;gbkey=Gene;gene=yhcE;gene_biotype=pseudogene;gene_synonym=ECK3207,JW3184,JW3187;locus_tag=b4569;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 3365185 3365551 . + 0 ID=cds3161;Parent=gene3279;Dbxref=ASAP:ABE-0010556,ASAP:ABE-0285070,ASAP:ABE-0285102,UniProtKB/Swiss-Prot:P45421,EcoGene:EG12811,GeneID:4056032;Note=pseudogene fragment~interrupted by IS5;gbkey=CDS;gene=yhcE;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3366751 3366929 . + 2 ID=cds3161;Parent=gene3279;Dbxref=ASAP:ABE-0010556,ASAP:ABE-0285070,ASAP:ABE-0285102,UniProtKB/Swiss-Prot:P45421,EcoGene:EG12811,GeneID:4056032;Note=pseudogene fragment~interrupted by IS5;gbkey=CDS;gene=yhcE;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 3365556 3366750 . - . ID=id411;gbkey=mobile_element NC_000913.3 RefSeq gene 3365702 3366718 . - . ID=gene3280;Dbxref=EcoGene:EG40008,GeneID:947743;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b3218 NC_000913.3 RefSeq CDS 3365702 3366718 . - 0 ID=cds3162;Parent=gene3280;Dbxref=ASAP:ABE-0010559,UniProtKB/Swiss-Prot:P0CE57,Genbank:NP_417685.1,EcoGene:EG40008,GeneID:947743;Name=NP_417685.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_417685.1;transl_table=11 NC_000913.3 RefSeq gene 3366926 3367642 . + . ID=gene3281;Dbxref=EcoGene:EG12812,GeneID:947735;Name=yhcF;gbkey=Gene;gene=yhcF;gene_biotype=protein_coding;gene_synonym=ECK3208,JW3188;locus_tag=b3219 NC_000913.3 RefSeq CDS 3366926 3367642 . + 0 ID=cds3163;Parent=gene3281;Dbxref=ASAP:ABE-0010564,UniProtKB/Swiss-Prot:P45422,Genbank:NP_417686.1,EcoGene:EG12812,GeneID:947735;Name=NP_417686.1;Note=putative transcriptional regulator;gbkey=CDS;gene=yhcF;product=putative transcriptional regulator;protein_id=NP_417686.1;transl_table=11 NC_000913.3 RefSeq gene 3367827 3368954 . + . ID=gene3282;Dbxref=EcoGene:EG12813,GeneID:947739;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;gene_synonym=ECK3209,JW3189;locus_tag=b3220 NC_000913.3 RefSeq CDS 3367827 3368954 . + 0 ID=cds3164;Parent=gene3282;Dbxref=ASAP:ABE-0010567,UniProtKB/Swiss-Prot:P45423,Genbank:NP_417687.1,EcoGene:EG12813,GeneID:947739;Name=NP_417687.1;gbkey=CDS;gene=yhcG;product=DUF1016 family protein in the PD-(D/E)XK nuclease superfamily;protein_id=NP_417687.1;transl_table=11 NC_000913.3 RefSeq gene 3369014 3369478 . - . ID=gene3283;Dbxref=EcoGene:EG12814,GeneID:947750;Name=yhcH;gbkey=Gene;gene=yhcH;gene_biotype=protein_coding;gene_synonym=ECK3210,JW3190;locus_tag=b3221 NC_000913.3 RefSeq CDS 3369014 3369478 . - 0 ID=cds3165;Parent=gene3283;Dbxref=ASAP:ABE-0010569,UniProtKB/Swiss-Prot:P45424,Genbank:NP_417688.1,EcoGene:EG12814,GeneID:947750;Name=NP_417688.1;gbkey=CDS;gene=yhcH;product=DUF386 family protein%2C cupin superfamily;protein_id=NP_417688.1;transl_table=11 NC_000913.3 RefSeq gene 3369475 3370350 . - . ID=gene3284;Dbxref=EcoGene:EG12815,GeneID:947757;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;gene_synonym=ECK3211,JW5538,yhcI;locus_tag=b3222 NC_000913.3 RefSeq CDS 3369475 3370350 . - 0 ID=cds3166;Parent=gene3284;Dbxref=ASAP:ABE-0010571,UniProtKB/Swiss-Prot:P45425,Genbank:NP_417689.4,EcoGene:EG12815,GeneID:947757;Name=NP_417689.4;gbkey=CDS;gene=nanK;product=N-acetylmannosamine kinase;protein_id=NP_417689.4;transl_table=11 NC_000913.3 RefSeq gene 3370347 3371036 . - . ID=gene3285;Dbxref=EcoGene:EG12816,GeneID:947745;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;gene_synonym=ECK3212,JW3192,yhcJ;locus_tag=b3223 NC_000913.3 RefSeq CDS 3370347 3371036 . - 0 ID=cds3167;Parent=gene3285;Dbxref=ASAP:ABE-0010575,UniProtKB/Swiss-Prot:P0A761,Genbank:NP_417690.1,EcoGene:EG12816,GeneID:947745;Name=NP_417690.1;gbkey=CDS;gene=nanE;product=putative N-acetylmannosamine-6-P epimerase;protein_id=NP_417690.1;transl_table=11 NC_000913.3 RefSeq gene 3371084 3372574 . - . ID=gene3286;Dbxref=EcoGene:EG20145,GeneID:947740;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;gene_synonym=ECK3213,JW3193;locus_tag=b3224 NC_000913.3 RefSeq CDS 3371084 3372574 . - 0 ID=cds3168;Parent=gene3286;Dbxref=ASAP:ABE-0010577,UniProtKB/Swiss-Prot:P41036,Genbank:NP_417691.4,EcoGene:EG20145,GeneID:947740;Name=NP_417691.4;gbkey=CDS;gene=nanT;product=sialic acid transporter;protein_id=NP_417691.4;transl_table=11 NC_000913.3 RefSeq gene 3372683 3373576 . - . ID=gene3287;Dbxref=EcoGene:EG10637,GeneID:947742;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;gene_synonym=ECK3214,JW3194,npl;locus_tag=b3225 NC_000913.3 RefSeq CDS 3372683 3373576 . - 0 ID=cds3169;Parent=gene3287;Dbxref=ASAP:ABE-0010579,UniProtKB/Swiss-Prot:P0A6L4,Genbank:NP_417692.1,EcoGene:EG10637,GeneID:947742;Name=NP_417692.1;Note=N-acetylneuraminate lyase (aldolase)%3B catabolism of sialic acid%3B not K-12?;gbkey=CDS;gene=nanA;product=N-acetylneuraminate lyase;protein_id=NP_417692.1;transl_table=11 NC_000913.3 RefSeq gene 3373698 3374489 . - . ID=gene3288;Dbxref=EcoGene:EG12817,GeneID:945468;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;gene_synonym=ECK3215,JW3195,yhcK;locus_tag=b3226 NC_000913.3 RefSeq CDS 3373698 3374489 . - 0 ID=cds3170;Parent=gene3288;Dbxref=ASAP:ABE-0010584,UniProtKB/Swiss-Prot:P0A8W0,Genbank:NP_417693.3,EcoGene:EG12817,GeneID:945468;Name=NP_417693.3;gbkey=CDS;gene=nanR;product=sialic acid-inducible nan operon repressor;protein_id=NP_417693.3;transl_table=11 NC_000913.3 RefSeq gene 3374869 3376236 . + . ID=gene3289;Dbxref=EcoGene:EG12818,GeneID:946575;Name=dcuD;gbkey=Gene;gene=dcuD;gene_biotype=protein_coding;gene_synonym=ECK3216,JW3196,yhcL;locus_tag=b3227 NC_000913.3 RefSeq CDS 3374869 3376236 . + 0 ID=cds3171;Parent=gene3289;Dbxref=ASAP:ABE-0010589,UniProtKB/Swiss-Prot:P45428,Genbank:NP_417694.1,EcoGene:EG12818,GeneID:946575;Name=NP_417694.1;gbkey=CDS;gene=dcuD;product=putative transporter;protein_id=NP_417694.1;transl_table=11 NC_000913.3 RefSeq gene 3376279 3376776 . - . ID=gene3290;Dbxref=EcoGene:EG10978,GeneID:944774;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;gene_synonym=ECK3217,JW3197;locus_tag=b3228 NC_000913.3 RefSeq CDS 3376279 3376776 . - 0 ID=cds3172;Parent=gene3290;Dbxref=ASAP:ABE-0010591,UniProtKB/Swiss-Prot:P0AFZ3,Genbank:NP_417695.1,EcoGene:EG10978,GeneID:944774;Name=NP_417695.1;Note=stringent starvation protein B;gbkey=CDS;gene=sspB;product=ClpXP protease specificity enhancing factor;protein_id=NP_417695.1;transl_table=11 NC_000913.3 RefSeq gene 3376782 3377420 . - . ID=gene3291;Dbxref=EcoGene:EG10977,GeneID:944744;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;gene_synonym=ECK3218,JW3198,pog,ssp;locus_tag=b3229 NC_000913.3 RefSeq CDS 3376782 3377420 . - 0 ID=cds3173;Parent=gene3291;Dbxref=ASAP:ABE-0010594,UniProtKB/Swiss-Prot:P0ACA3,Genbank:NP_417696.1,EcoGene:EG10977,GeneID:944744;Name=NP_417696.1;Note=regulator of transcription%3B stringent starvation protein A;gbkey=CDS;gene=sspA;product=stringent starvation protein A%2C phage P1 late gene activator%2C RNAP-associated acid-resistance protein%2C inactive glutathione S-transferase homolog;protein_id=NP_417696.1;transl_table=11 NC_000913.3 RefSeq gene 3377815 3378207 . - . ID=gene3292;Dbxref=EcoGene:EG10908,GeneID:949000;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;gene_synonym=ECK3219,JW3199;locus_tag=b3230 NC_000913.3 RefSeq CDS 3377815 3378207 . - 0 ID=cds3174;Parent=gene3292;Dbxref=ASAP:ABE-0010597,UniProtKB/Swiss-Prot:P0A7X3,Genbank:NP_417697.1,EcoGene:EG10908,GeneID:949000;Name=NP_417697.1;gbkey=CDS;gene=rpsI;product=30S ribosomal subunit protein S9;protein_id=NP_417697.1;transl_table=11 NC_000913.3 RefSeq gene 3378223 3378651 . - . ID=gene3293;Dbxref=EcoGene:EG10874,GeneID:947828;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;gene_synonym=ECK3220,JW3200;locus_tag=b3231 NC_000913.3 RefSeq CDS 3378223 3378651 . - 0 ID=cds3175;Parent=gene3293;Dbxref=ASAP:ABE-0010599,UniProtKB/Swiss-Prot:P0AA10,Genbank:NP_417698.1,EcoGene:EG10874,GeneID:947828;Name=NP_417698.1;gbkey=CDS;gene=rplM;product=50S ribosomal subunit protein L13;protein_id=NP_417698.1;transl_table=11 NC_000913.3 RefSeq gene 3378870 3379997 . - . ID=gene3294;Dbxref=EcoGene:EG12819,GeneID:947821;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;gene_synonym=ECK3221,JW3201,yhcM;locus_tag=b3232 NC_000913.3 RefSeq CDS 3378870 3379997 . - 0 ID=cds3176;Parent=gene3294;Dbxref=ASAP:ABE-0010602,UniProtKB/Swiss-Prot:P64612,Genbank:NP_417699.1,EcoGene:EG12819,GeneID:947821;Name=NP_417699.1;gbkey=CDS;gene=zapE;product=divisome ATPase;protein_id=NP_417699.1;transl_table=11 NC_000913.3 RefSeq gene 3380191 3380589 . + . ID=gene3295;Dbxref=EcoGene:EG12614,GeneID:947815;Name=yhcB;gbkey=Gene;gene=yhcB;gene_biotype=protein_coding;gene_synonym=ECK3222,JW5539;locus_tag=b3233 NC_000913.3 RefSeq CDS 3380191 3380589 . + 0 ID=cds3177;Parent=gene3295;Dbxref=ASAP:ABE-0010606,UniProtKB/Swiss-Prot:P0ADW3,Genbank:NP_417700.2,EcoGene:EG12614,GeneID:947815;Name=NP_417700.2;gbkey=CDS;gene=yhcB;product=DUF1043 family inner membrane-anchored protein;protein_id=NP_417700.2;transl_table=11 NC_000913.3 RefSeq gene 3380743 3382110 . + . ID=gene3296;Dbxref=EcoGene:EG12612,GeneID:947812;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;gene_synonym=ECK3223,hhoA,JW3203;locus_tag=b3234 NC_000913.3 RefSeq CDS 3380743 3382110 . + 0 ID=cds3178;Parent=gene3296;Dbxref=ASAP:ABE-0010609,UniProtKB/Swiss-Prot:P39099,Genbank:NP_417701.1,EcoGene:EG12612,GeneID:947812;Name=NP_417701.1;Note=serine endoprotease;gbkey=CDS;gene=degQ;product=serine endoprotease%2C periplasmic;protein_id=NP_417701.1;transl_table=11 NC_000913.3 RefSeq gene 3382200 3383267 . + . ID=gene3297;Dbxref=EcoGene:EG11652,GeneID:947865;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;gene_synonym=ECK3224,hhoB,htrH,JW3204;locus_tag=b3235 NC_000913.3 RefSeq CDS 3382200 3383267 . + 0 ID=cds3179;Parent=gene3297;Dbxref=ASAP:ABE-0010611,UniProtKB/Swiss-Prot:P0AEE3,Genbank:NP_417702.1,EcoGene:EG11652,GeneID:947865;Name=NP_417702.1;Note=protease;gbkey=CDS;gene=degS;product=serine endoprotease%2C periplasmic;protein_id=NP_417702.1;transl_table=11 NC_000913.3 RefSeq gene 3383330 3384268 . - . ID=gene3298;Dbxref=EcoGene:EG10576,GeneID:947854;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;gene_synonym=ECK3225,JW3205;locus_tag=b3236 NC_000913.3 RefSeq CDS 3383330 3384268 . - 0 ID=cds3180;Parent=gene3298;Dbxref=ASAP:ABE-0010613,UniProtKB/Swiss-Prot:P61889,Genbank:NP_417703.1,EcoGene:EG10576,GeneID:947854;Name=NP_417703.1;Note=malate dehydrogenase;gbkey=CDS;gene=mdh;product=malate dehydrogenase%2C NAD(P)-binding;protein_id=NP_417703.1;transl_table=11 NC_000913.3 RefSeq gene 3384703 3385173 . + . ID=gene3299;Dbxref=EcoGene:EG10070,GeneID:947861;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;gene_synonym=ECK3226,JW3206,Rarg,xerA;locus_tag=b3237 NC_000913.3 RefSeq CDS 3384703 3385173 . + 0 ID=cds3181;Parent=gene3299;Dbxref=ASAP:ABE-0010620,UniProtKB/Swiss-Prot:P0A6D0,Genbank:NP_417704.1,EcoGene:EG10070,GeneID:947861;Name=NP_417704.1;Note=repressor of arg regulon%3B cer-mediated site specific recombination;gbkey=CDS;gene=argR;product=l-arginine-responsive arginine metabolism regulon transcriptional regulator;protein_id=NP_417704.1;transl_table=11 NC_000913.3 RefSeq gene 3385538 3385801 . + . ID=gene3300;Dbxref=EcoGene:EG12820,GeneID:947835;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;gene_synonym=ECK3227,JW5540;locus_tag=b3238 NC_000913.3 RefSeq CDS 3385538 3385801 . + 0 ID=cds3182;Parent=gene3300;Dbxref=ASAP:ABE-0010623,UniProtKB/Swiss-Prot:P64614,Genbank:NP_417705.2,EcoGene:EG12820,GeneID:947835;Name=NP_417705.2;gbkey=CDS;gene=yhcN;product=cadmium and peroxide resistance protein%2C stress-induced;protein_id=NP_417705.2;transl_table=11 NC_000913.3 RefSeq gene 3385857 3386129 . - . ID=gene3301;Dbxref=EcoGene:EG12821,GeneID:947830;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;gene_synonym=ECK3228,JW3208;locus_tag=b3239 NC_000913.3 RefSeq CDS 3385857 3386129 . - 0 ID=cds3183;Parent=gene3301;Dbxref=ASAP:ABE-0010625,UniProtKB/Swiss-Prot:P64616,Genbank:NP_417706.1,EcoGene:EG12821,GeneID:947830;Name=NP_417706.1;gbkey=CDS;gene=yhcO;product=putative barnase inhibitor;protein_id=NP_417706.1;transl_table=11 NC_000913.3 RefSeq gene 3386221 3388188 . - . ID=gene3302;Dbxref=EcoGene:EG12822,GeneID:947747;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;gene_synonym=ECK3229,JW3209,yhcP;locus_tag=b3240 NC_000913.3 RefSeq CDS 3386221 3388188 . - 0 ID=cds3184;Parent=gene3302;Dbxref=ASAP:ABE-0010629,UniProtKB/Swiss-Prot:P46481,Genbank:NP_417707.1,EcoGene:EG12822,GeneID:947747;Name=NP_417707.1;gbkey=CDS;gene=aaeB;product=p-hydroxybenzoic acid efflux system component;protein_id=NP_417707.1;transl_table=11 NC_000913.3 RefSeq gene 3388194 3389126 . - . ID=gene3303;Dbxref=EcoGene:EG12823,GeneID:947748;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;gene_synonym=ECK3230,JW3210,yhcQ;locus_tag=b3241 NC_000913.3 RefSeq CDS 3388194 3389126 . - 0 ID=cds3185;Parent=gene3303;Dbxref=ASAP:ABE-0010631,UniProtKB/Swiss-Prot:P46482,Genbank:NP_417708.1,EcoGene:EG12823,GeneID:947748;Name=NP_417708.1;gbkey=CDS;gene=aaeA;product=p-hydroxybenzoic acid efflux system component;protein_id=NP_417708.1;transl_table=11 NC_000913.3 RefSeq gene 3389134 3389337 . - . ID=gene3304;Dbxref=EcoGene:EG12824,GeneID:947751;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;gene_synonym=ECK3231,JW5541,yhcR;locus_tag=b3242 NC_000913.3 RefSeq CDS 3389134 3389337 . - 0 ID=cds3186;Parent=gene3304;Dbxref=ASAP:ABE-0010636,UniProtKB/Swiss-Prot:P46478,Genbank:NP_417709.2,EcoGene:EG12824,GeneID:947751;Name=NP_417709.2;gbkey=CDS;gene=aaeX;product=DUF1656 family putative inner membrane efflux pump associated protein;protein_id=NP_417709.2;transl_table=11 NC_000913.3 RefSeq gene 3389520 3390449 . + . ID=gene3305;Dbxref=EcoGene:EG12825,GeneID:947760;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;gene_synonym=ECK3232,JW3212,qseA,yhcS;locus_tag=b3243 NC_000913.3 RefSeq CDS 3389520 3390449 . + 0 ID=cds3187;Parent=gene3305;Dbxref=ASAP:ABE-0010639,UniProtKB/Swiss-Prot:P67662,Genbank:NP_417710.1,EcoGene:EG12825,GeneID:947760;Name=NP_417710.1;gbkey=CDS;gene=aaeR;product=transcriptional regulator for aaeXAB operon;protein_id=NP_417710.1;transl_table=11 NC_000913.3 RefSeq gene 3390583 3392028 . - . ID=gene3306;Dbxref=EcoGene:EG12826,GeneID:947749;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;gene_synonym=ECK3233,JW3213,yhdO;locus_tag=b3244 NC_000913.3 RefSeq CDS 3390583 3392028 . - 0 ID=cds3188;Parent=gene3306;Dbxref=ASAP:ABE-0010642,UniProtKB/Swiss-Prot:P0AGG8,Genbank:NP_417711.1,EcoGene:EG12826,GeneID:947749;Name=NP_417711.1;Note=suppresses inhibitory activity of CsrA;gbkey=CDS;gene=tldD;product=putative peptidase;protein_id=NP_417711.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3392076 3392383 . + . ID=id412;Note=REP245 (repetitive extragenic palindromic) element%3B contains 7 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3392458 3396258 . - . ID=gene3307;Dbxref=EcoGene:EG12827,GeneID:2847740;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;gene_synonym=ECK3234,JW5542,yhdQ,yhdR;locus_tag=b4472 NC_000913.3 RefSeq CDS 3392458 3396258 . - 0 ID=cds3189;Parent=gene3307;Dbxref=ASAP:ABE-0174102,UniProtKB/Swiss-Prot:P46474,Genbank:YP_026208.1,EcoGene:EG12827,GeneID:2847740;Name=YP_026208.1;gbkey=CDS;gene=yhdP;product=DUF3971-AsmA2 domains protein;protein_id=YP_026208.1;transl_table=11 NC_000913.3 RefSeq gene 3396326 3397795 . - . ID=gene3308;Dbxref=EcoGene:EG11299,GeneID:947744;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;gene_synonym=adhR,cafA,ECK3235,JW3216,yhdF;locus_tag=b3247 NC_000913.3 RefSeq CDS 3396326 3397795 . - 0 ID=cds3190;Parent=gene3308;Dbxref=ASAP:ABE-0010651,UniProtKB/Swiss-Prot:P0A9J0,Genbank:NP_417713.2,EcoGene:EG11299,GeneID:947744;Name=NP_417713.2;gbkey=CDS;gene=rng;product=ribonuclease G;protein_id=NP_417713.2;transl_table=11 NC_000913.3 RefSeq gene 3397785 3398378 . - . ID=gene3309;Dbxref=EcoGene:EG11298,GeneID:947753;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;gene_synonym=ECK3236,JW3217,maf;locus_tag=b3248 NC_000913.3 RefSeq CDS 3397785 3398378 . - 0 ID=cds3191;Parent=gene3309;Dbxref=ASAP:ABE-0010653,UniProtKB/Swiss-Prot:P25536,Genbank:NP_417714.1,EcoGene:EG11298,GeneID:947753;Name=NP_417714.1;gbkey=CDS;gene=yhdE;product=dTTP/UTP pyrophosphatase%3B m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase;protein_id=NP_417714.1;transl_table=11 NC_000913.3 RefSeq gene 3398387 3398875 . - . ID=gene3310;Dbxref=EcoGene:EG10610,GeneID:947756;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;gene_synonym=ECK3237,JW3218;locus_tag=b3249 NC_000913.3 RefSeq CDS 3398387 3398875 . - 0 ID=cds3192;Parent=gene3310;Dbxref=ASAP:ABE-0010656,UniProtKB/Swiss-Prot:P0ABH4,Genbank:NP_417715.1,EcoGene:EG10610,GeneID:947756;Name=NP_417715.1;Note=rod shape-determining protein;gbkey=CDS;gene=mreD;product=cell wall structural complex MreBCD transmembrane component MreD;protein_id=NP_417715.1;transl_table=11 NC_000913.3 RefSeq gene 3398875 3399978 . - . ID=gene3311;Dbxref=EcoGene:EG10609,GeneID:947655;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;gene_synonym=ECK3238,JW3219;locus_tag=b3250 NC_000913.3 RefSeq CDS 3398875 3399978 . - 0 ID=cds3193;Parent=gene3311;Dbxref=ASAP:ABE-0010658,UniProtKB/Swiss-Prot:P16926,Genbank:NP_417716.1,EcoGene:EG10609,GeneID:947655;Name=NP_417716.1;Note=rod shape-determining protein;gbkey=CDS;gene=mreC;product=cell wall structural complex MreBCD transmembrane component MreC;protein_id=NP_417716.1;transl_table=11 NC_000913.3 RefSeq gene 3400044 3401087 . - . ID=gene3312;Dbxref=EcoGene:EG10608,GeneID:948588;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;gene_synonym=ECK3239,envB,JW3220,mon,rodY;locus_tag=b3251 NC_000913.3 RefSeq CDS 3400044 3401087 . - 0 ID=cds3194;Parent=gene3312;Dbxref=ASAP:ABE-0010661,UniProtKB/Swiss-Prot:P0A9X4,Genbank:NP_417717.2,EcoGene:EG10608,GeneID:948588;Name=NP_417717.2;Note=regulator of ftsI%2C penicillin binding protein 3%2C septation function;gbkey=CDS;gene=mreB;product=cell wall structural complex MreBCD%2C actin-like component MreB;protein_id=NP_417717.2;transl_table=11 NC_000913.3 RefSeq gene 3401392 3403332 . - . ID=gene3313;Dbxref=EcoGene:EG10018,GeneID:947702;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;gene_synonym=ECK3240,JW3221,yhdA;locus_tag=b3252 NC_000913.3 RefSeq CDS 3401392 3403332 . - 0 ID=cds3195;Parent=gene3313;Dbxref=ASAP:ABE-0010663,UniProtKB/Swiss-Prot:P13518,Genbank:NP_417718.1,EcoGene:EG10018,GeneID:947702;Name=NP_417718.1;gbkey=CDS;gene=csrD;product=targeting factor for csrBC sRNA degradation;protein_id=NP_417718.1;transl_table=11 NC_000913.3 RefSeq gene 3403484 3404458 . + . ID=gene3314;Dbxref=EcoGene:EG11315,GeneID:947848;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;gene_synonym=ECK3241,JW3222,yhdH;locus_tag=b3253 NC_000913.3 RefSeq CDS 3403484 3404458 . + 0 ID=cds3196;Parent=gene3314;Dbxref=ASAP:ABE-0010667,UniProtKB/Swiss-Prot:P26646,Genbank:NP_417719.1,EcoGene:EG11315,GeneID:947848;Name=NP_417719.1;Note=putative dehydrogenase;gbkey=CDS;gene=acuI;product=putative acryloyl-CoA reductase;protein_id=NP_417719.1;transl_table=11 NC_000913.3 RefSeq gene 3404495 3404637 . + . ID=gene3315;Dbxref=EcoGene:EG14497,GeneID:7751640;Name=yrdF;gbkey=Gene;gene=yrdF;gene_biotype=pseudogene;gene_synonym=ECK4509;locus_tag=b4697;pseudo=true NC_000913.3 RefSeq CDS 3404495 3404637 . + 0 ID=cds3197;Parent=gene3315;Dbxref=EcoGene:EG14497,GeneID:7751640;Note=pseudogene%2C conserved protein;gbkey=CDS;gene=yrdF;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3404638 3405031 . + . ID=gene3316;Dbxref=EcoGene:EG14352,GeneID:5625572;Name=yrdE;gbkey=Gene;gene=yrdE;gene_biotype=pseudogene;gene_synonym=ECK4442;locus_tag=b4646;pseudo=true NC_000913.3 RefSeq CDS 3404638 3404733 . + 0 ID=cds3198;Parent=gene3316;Dbxref=ASAP:ABE-0285243,EcoGene:EG14352,GeneID:5625572;Note=pseudogene%2C yedZ paralog;gbkey=CDS;gene=yrdE;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3404732 3405031 . + 0 ID=cds3198;Parent=gene3316;Dbxref=ASAP:ABE-0285243,EcoGene:EG14352,GeneID:5625572;Note=pseudogene%2C yedZ paralog;gbkey=CDS;gene=yrdE;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3405436 3405906 . + . ID=gene3317;Dbxref=EcoGene:EG10275,GeneID:947758;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;gene_synonym=ECK3242,fabE,JW3223;locus_tag=b3255 NC_000913.3 RefSeq CDS 3405436 3405906 . + 0 ID=cds3199;Parent=gene3317;Dbxref=ASAP:ABE-0010675,UniProtKB/Swiss-Prot:P0ABD8,Genbank:NP_417721.1,EcoGene:EG10275,GeneID:947758;Name=NP_417721.1;Note=acetylCoA carboxylase%2C BCCP subunit%3B carrier of biotin;gbkey=CDS;gene=accB;product=acetyl CoA carboxylase%2C BCCP subunit;protein_id=NP_417721.1;transl_table=11 NC_000913.3 RefSeq gene 3405917 3407266 . + . ID=gene3318;Dbxref=EcoGene:EG10276,GeneID:947761;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;gene_synonym=ECK3243,fabG,JW3224;locus_tag=b3256 NC_000913.3 RefSeq CDS 3405917 3407266 . + 0 ID=cds3200;Parent=gene3318;Dbxref=ASAP:ABE-0010677,UniProtKB/Swiss-Prot:P24182,Genbank:NP_417722.1,EcoGene:EG10276,GeneID:947761;Name=NP_417722.1;Note=acetyl CoA carboxylase%2C biotin carboxylase subunit;gbkey=CDS;gene=accC;product=acetyl-CoA carboxylase%2C biotin carboxylase subunit;protein_id=NP_417722.1;transl_table=11 NC_000913.3 RefSeq gene 3407375 3407617 . + . ID=gene3319;Dbxref=EcoGene:EG12831,GeneID:947762;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;gene_synonym=ECK3244,JW3225;locus_tag=b3257 NC_000913.3 RefSeq CDS 3407375 3407617 . + 0 ID=cds3201;Parent=gene3319;Dbxref=ASAP:ABE-0010690,UniProtKB/Swiss-Prot:P45566,Genbank:NP_417723.1,EcoGene:EG12831,GeneID:947762;Name=NP_417723.1;gbkey=CDS;gene=yhdT;product=DUF997 family putative inner membrane protein;protein_id=NP_417723.1;transl_table=11 NC_000913.3 RefSeq gene 3407607 3409058 . + . ID=gene3320;Dbxref=EcoGene:EG10685,GeneID:947752;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;gene_synonym=ECK3245,JW3226;locus_tag=b3258 NC_000913.3 RefSeq CDS 3407607 3409058 . + 0 ID=cds3202;Parent=gene3320;Dbxref=ASAP:ABE-0010695,UniProtKB/Swiss-Prot:P16256,Genbank:NP_417724.4,EcoGene:EG10685,GeneID:947752;Name=NP_417724.4;Note=sodium/pantothenate symporter;gbkey=CDS;gene=panF;product=pantothenate:sodium symporter;protein_id=NP_417724.4;transl_table=11 NC_000913.3 RefSeq gene 3409070 3409951 . + . ID=gene3321;Dbxref=EcoGene:EG11497,GeneID:947708;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;gene_synonym=ECK3246,JW3227,prm-1,yhdI;locus_tag=b3259 NC_000913.3 RefSeq CDS 3409070 3409951 . + 0 ID=cds3203;Parent=gene3321;Dbxref=ASAP:ABE-0010697,UniProtKB/Swiss-Prot:P0A8T1,Genbank:NP_417725.1,EcoGene:EG11497,GeneID:947708;Name=NP_417725.1;gbkey=CDS;gene=prmA;product=methyltransferase for 50S ribosomal subunit protein L11;protein_id=NP_417725.1;transl_table=11 NC_000913.3 RefSeq gene 3410280 3411245 . + . ID=gene3322;Dbxref=EcoGene:EG11311,GeneID:947707;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;gene_synonym=ECK3247,JW3228,yhdG;locus_tag=b3260 NC_000913.3 RefSeq CDS 3410280 3411245 . + 0 ID=cds3204;Parent=gene3322;Dbxref=ASAP:ABE-0010700,UniProtKB/Swiss-Prot:P0ABT5,Genbank:NP_417726.1,EcoGene:EG11311,GeneID:947707;Name=NP_417726.1;Note=putative dehydrogenase;gbkey=CDS;gene=dusB;product=tRNA-dihydrouridine synthase B;protein_id=NP_417726.1;transl_table=11 NC_000913.3 RefSeq gene 3411271 3411567 . + . ID=gene3323;Dbxref=EcoGene:EG10317,GeneID:947697;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;gene_synonym=ECK3248,JW3229,nbp;locus_tag=b3261 NC_000913.3 RefSeq CDS 3411271 3411567 . + 0 ID=cds3205;Parent=gene3323;Dbxref=ASAP:ABE-0010703,UniProtKB/Swiss-Prot:P0A6R3,Genbank:NP_417727.1,EcoGene:EG10317,GeneID:947697;Name=NP_417727.1;Note=site-specific DNA inversion stimulation factor%3B DNA-binding protein%3B a trans activator for transcription;gbkey=CDS;gene=fis;product=global DNA-binding transcriptional dual regulator;protein_id=NP_417727.1;transl_table=11 NC_000913.3 RefSeq gene 3411653 3412537 . + . ID=gene3324;Dbxref=EcoGene:EG11498,GeneID:947695;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;gene_synonym=ccrM,ECK3249,JW5543;locus_tag=b3262 NC_000913.3 RefSeq CDS 3411653 3412537 . + 0 ID=cds3206;Parent=gene3324;Dbxref=ASAP:ABE-0010706,UniProtKB/Swiss-Prot:P28638,Genbank:NP_417728.4,EcoGene:EG11498,GeneID:947695;Name=NP_417728.4;Note=putative methyltransferase;gbkey=CDS;gene=yhdJ;product=DNA adenine methyltransferase%2C SAM-dependent;protein_id=NP_417728.4;transl_table=11 NC_000913.3 RefSeq gene 3412621 3412800 . + . ID=gene3325;Dbxref=EcoGene:EG12832,GeneID:947700;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;gene_synonym=ECK3250,JW3231;locus_tag=b3263 NC_000913.3 RefSeq CDS 3412621 3412800 . + 0 ID=cds3207;Parent=gene3325;Dbxref=ASAP:ABE-0010710,UniProtKB/Swiss-Prot:P64619,Genbank:NP_417729.1,EcoGene:EG12832,GeneID:947700;Name=NP_417729.1;gbkey=CDS;gene=yhdU;product=putative membrane protein;protein_id=NP_417729.1;transl_table=11 NC_000913.3 RefSeq gene 3412803 3413465 . - . ID=gene3326;Dbxref=EcoGene:EG11741,GeneID:947704;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;gene_synonym=ECK3251,envR,JW3232,yhdK;locus_tag=b3264 NC_000913.3 RefSeq CDS 3412803 3413465 . - 0 ID=cds3208;Parent=gene3326;Dbxref=ASAP:ABE-0010712,UniProtKB/Swiss-Prot:P0ACT2,Genbank:NP_417730.1,EcoGene:EG11741,GeneID:947704;Name=NP_417730.1;Note=putative transcriptional regulator;gbkey=CDS;gene=acrS;product=acrAB operon transcriptional repressor;protein_id=NP_417730.1;transl_table=11 NC_000913.3 RefSeq gene 3413864 3415021 . + . ID=gene3327;Dbxref=EcoGene:EG10266,GeneID:947706;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;gene_synonym=ECK3252,envC,JW3233;locus_tag=b3265 NC_000913.3 RefSeq CDS 3413864 3415021 . + 0 ID=cds3209;Parent=gene3327;Dbxref=ASAP:ABE-0010722,UniProtKB/Swiss-Prot:P24180,Genbank:NP_417731.1,EcoGene:EG10266,GeneID:947706;Name=NP_417731.1;Note=transmembrane protein affects septum formation and cell membrane permeability;gbkey=CDS;gene=acrE;product=cytoplasmic membrane lipoprotein;protein_id=NP_417731.1;transl_table=11 NC_000913.3 RefSeq gene 3415033 3418137 . + . ID=gene3328;Dbxref=EcoGene:EG10267,GeneID:947768;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;gene_synonym=ECK3253,envD,JW3234;locus_tag=b3266 NC_000913.3 RefSeq CDS 3415033 3418137 . + 0 ID=cds3210;Parent=gene3328;Dbxref=ASAP:ABE-0010724,UniProtKB/Swiss-Prot:P24181,Genbank:NP_417732.1,EcoGene:EG10267,GeneID:947768;Name=NP_417732.1;Note=integral transmembrane protein%3B acridine resistance;gbkey=CDS;gene=acrF;product=multidrug efflux system protein;protein_id=NP_417732.1;transl_table=11 NC_000913.3 RefSeq gene 3418390 3418611 . + . ID=gene3329;Dbxref=EcoGene:EG12833,GeneID:947767;Name=yhdV;gbkey=Gene;gene=yhdV;gene_biotype=protein_coding;gene_synonym=ECK3254,JW3235;locus_tag=b3267 NC_000913.3 RefSeq CDS 3418390 3418611 . + 0 ID=cds3211;Parent=gene3329;Dbxref=ASAP:ABE-0010728,UniProtKB/Swiss-Prot:P64622,Genbank:NP_417733.1,EcoGene:EG12833,GeneID:947767;Name=NP_417733.1;gbkey=CDS;gene=yhdV;product=putative outer membrane protein;protein_id=NP_417733.1;transl_table=11 NC_000913.3 RefSeq gene 3419042 3420066 . + . ID=gene3330;Dbxref=EcoGene:EG12834,GeneID:947766;Name=yhdW;gbkey=Gene;gene=yhdW;gene_biotype=pseudogene;gene_synonym=ECK3255,JW3236;locus_tag=b3268;pseudo=true NC_000913.3 RefSeq CDS 3419042 3419107 . + 0 ID=cds3212;Parent=gene3330;Dbxref=ASAP:ABE-0010731,UniProtKB/Swiss-Prot:P45766,EcoGene:EG12834,GeneID:947766;Note=pseudogene%2C ABC transporter periplasmic binding protein family%3Bputative transport%3B Not classified~putative periplasmic binding transport protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=yhdW;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3419107 3420066 . + 0 ID=cds3212;Parent=gene3330;Dbxref=ASAP:ABE-0010731,UniProtKB/Swiss-Prot:P45766,EcoGene:EG12834,GeneID:947766;Note=pseudogene%2C ABC transporter periplasmic binding protein family%3Bputative transport%3B Not classified~putative periplasmic binding transport protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=yhdW;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3420134 3421315 . + . ID=gene3331;Dbxref=EcoGene:EG12835,GeneID:947765;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;gene_synonym=ECK3256,JW5544;locus_tag=b3269 NC_000913.3 RefSeq CDS 3420134 3421315 . + 0 ID=cds3213;Parent=gene3331;Dbxref=ASAP:ABE-0010733,UniProtKB/Swiss-Prot:P45767,Genbank:YP_026209.1,EcoGene:EG12835,GeneID:947765;Name=YP_026209.1;Note=putative transport system permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=yhdX;product=putative amino acid ABC transporter permease;protein_id=YP_026209.1;transl_table=11 NC_000913.3 RefSeq gene 3421325 3422428 . + . ID=gene3332;Dbxref=EcoGene:EG12836,GeneID:947764;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;gene_synonym=ECK3257,JW5545;locus_tag=b3270 NC_000913.3 RefSeq CDS 3421325 3422428 . + 0 ID=cds3214;Parent=gene3332;Dbxref=ASAP:ABE-0010736,UniProtKB/Swiss-Prot:P45768,Genbank:NP_417736.2,EcoGene:EG12836,GeneID:947764;Name=NP_417736.2;Note=putative transport system permease protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=yhdY;product=putative amino acid ABC transporter permease;protein_id=NP_417736.2;transl_table=11 NC_000913.3 RefSeq gene 3422436 3423194 . + . ID=gene3333;Dbxref=EcoGene:EG12837,GeneID:947763;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;gene_synonym=ECK3258,JW3239;locus_tag=b3271 NC_000913.3 RefSeq CDS 3422436 3423194 . + 0 ID=cds3215;Parent=gene3333;Dbxref=ASAP:ABE-0010738,UniProtKB/Swiss-Prot:P45769,Genbank:NP_417737.1,EcoGene:EG12837,GeneID:947763;Name=NP_417737.1;Note=putative ATP-binding component of a transport system%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=yhdZ;product=putative amino acid ABC transporter ATPase;protein_id=NP_417737.1;transl_table=11 NC_000913.3 RefSeq gene 3423423 3423542 . - . ID=gene3334;Dbxref=EcoGene:EG30091,GeneID:947771;Name=rrfF;gbkey=Gene;gene=rrfF;gene_biotype=rRNA;gene_synonym=ECK3259,JWR0073,rrfDbeta,rrvD;locus_tag=b3272 NC_000913.3 RefSeq rRNA 3423423 3423542 . - . ID=rna117;Parent=gene3334;Dbxref=ASAP:ABE-0010740,EcoGene:EG30091,GeneID:947771;gbkey=rRNA;gene=rrfF;product=5S ribosomal RNA of rrnD operon NC_000913.3 RefSeq exon 3423423 3423542 . - . ID=id413;Parent=rna117;Dbxref=ASAP:ABE-0010740,EcoGene:EG30091,GeneID:947771;gbkey=rRNA;gene=rrfF;product=5S ribosomal RNA of rrnD operon NC_000913.3 RefSeq gene 3423580 3423655 . - . ID=gene3335;Dbxref=EcoGene:EG30103,GeneID:947770;Name=thrV;gbkey=Gene;gene=thrV;gene_biotype=tRNA;gene_synonym=ECK3260,JWR0074;locus_tag=b3273 NC_000913.3 RefSeq tRNA 3423580 3423655 . - . ID=rna118;Parent=gene3335;Dbxref=ASAP:ABE-0010742,EcoGene:EG30103,GeneID:947770;Note=anticodon: GGU;gbkey=tRNA;gene=thrV;product=tRNA-Thr NC_000913.3 RefSeq exon 3423580 3423655 . - . ID=id414;Parent=rna118;Dbxref=ASAP:ABE-0010742,EcoGene:EG30103,GeneID:947770;Note=anticodon: GGU;gbkey=tRNA;gene=thrV;product=tRNA-Thr NC_000913.3 RefSeq gene 3423668 3423787 . - . ID=gene3336;Dbxref=EcoGene:EG30073,GeneID:947769;Name=rrfD;gbkey=Gene;gene=rrfD;gene_biotype=rRNA;gene_synonym=ECK3261,JWR0075;locus_tag=b3274 NC_000913.3 RefSeq rRNA 3423668 3423787 . - . ID=rna119;Parent=gene3336;Dbxref=ASAP:ABE-0010744,EcoGene:EG30073,GeneID:947769;gbkey=rRNA;gene=rrfD;product=5S ribosomal RNA of rrnD operon NC_000913.3 RefSeq exon 3423668 3423787 . - . ID=id415;Parent=rna119;Dbxref=ASAP:ABE-0010744,EcoGene:EG30073,GeneID:947769;gbkey=rRNA;gene=rrfD;product=5S ribosomal RNA of rrnD operon NC_000913.3 RefSeq gene 3423880 3426783 . - . ID=gene3337;Dbxref=EcoGene:EG30080,GeneID:947773;Name=rrlD;gbkey=Gene;gene=rrlD;gene_biotype=rRNA;gene_synonym=ECK3262,JWR0076;locus_tag=b3275 NC_000913.3 RefSeq rRNA 3423880 3426783 . - . ID=rna120;Parent=gene3337;Dbxref=ASAP:ABE-0010746,EcoGene:EG30080,GeneID:947773;gbkey=rRNA;gene=rrlD;product=23S ribosomal RNA of rrnD operon NC_000913.3 RefSeq exon 3423880 3426783 . - . ID=id416;Parent=rna120;Dbxref=ASAP:ABE-0010746,EcoGene:EG30080,GeneID:947773;gbkey=rRNA;gene=rrlD;product=23S ribosomal RNA of rrnD operon NC_000913.3 RefSeq gene 3426958 3427033 . - . ID=gene3338;Dbxref=EcoGene:EG30009,GeneID:947772;Name=alaU;gbkey=Gene;gene=alaU;gene_biotype=tRNA;gene_synonym=ECK3263,JWR0077,talD;locus_tag=b3276 NC_000913.3 RefSeq tRNA 3426958 3427033 . - . ID=rna121;Parent=gene3338;Dbxref=ASAP:ABE-0010748,EcoGene:EG30009,GeneID:947772;Note=anticodon: UGC;gbkey=tRNA;gene=alaU;product=tRNA-Ala NC_000913.3 RefSeq exon 3426958 3427033 . - . ID=id417;Parent=rna121;Dbxref=ASAP:ABE-0010748,EcoGene:EG30009,GeneID:947772;Note=anticodon: UGC;gbkey=tRNA;gene=alaU;product=tRNA-Ala NC_000913.3 RefSeq gene 3427076 3427152 . - . ID=gene3339;Dbxref=EcoGene:EG30044,GeneID:947778;Name=ileU;gbkey=Gene;gene=ileU;gene_biotype=tRNA;gene_synonym=ECK3264,JWR0078,tilD;locus_tag=b3277 NC_000913.3 RefSeq tRNA 3427076 3427152 . - . ID=rna122;Parent=gene3339;Dbxref=ASAP:ABE-0010750,EcoGene:EG30044,GeneID:947778;Note=anticodon: GAU;gbkey=tRNA;gene=ileU;product=tRNA-Ile NC_000913.3 RefSeq exon 3427076 3427152 . - . ID=id418;Parent=rna122;Dbxref=ASAP:ABE-0010750,EcoGene:EG30044,GeneID:947778;Note=anticodon: GAU;gbkey=tRNA;gene=ileU;product=tRNA-Ile NC_000913.3 RefSeq gene 3427221 3428762 . - . ID=gene3340;Dbxref=EcoGene:EG30087,GeneID:947777;Name=rrsD;gbkey=Gene;gene=rrsD;gene_biotype=rRNA;gene_synonym=ECK3265,JWR0079;locus_tag=b3278 NC_000913.3 RefSeq rRNA 3427221 3428762 . - . ID=rna123;Parent=gene3340;Dbxref=ASAP:ABE-0010753,EcoGene:EG30087,GeneID:947777;gbkey=rRNA;gene=rrsD;product=16S ribosomal RNA of rrnD operon NC_000913.3 RefSeq exon 3427221 3428762 . - . ID=id419;Parent=rna123;Dbxref=ASAP:ABE-0010753,EcoGene:EG30087,GeneID:947777;gbkey=rRNA;gene=rrsD;product=16S ribosomal RNA of rrnD operon NC_000913.3 RefSeq gene 3429236 3429790 . + . ID=gene3341;Dbxref=EcoGene:EG12838,GeneID:947775;Name=yrdA;gbkey=Gene;gene=yrdA;gene_biotype=protein_coding;gene_synonym=ECK3266,JW5710;locus_tag=b3279 NC_000913.3 RefSeq CDS 3429236 3429790 . + 0 ID=cds3216;Parent=gene3341;Dbxref=ASAP:ABE-0010759,UniProtKB/Swiss-Prot:P0A9W9,Genbank:NP_417738.4,EcoGene:EG12838,GeneID:947775;Name=NP_417738.4;Note=putative transferase;gbkey=CDS;gene=yrdA;product=bacterial transferase hexapeptide domain protein;protein_id=NP_417738.4;transl_table=11 NC_000913.3 RefSeq gene 3429766 3430023 . - . ID=gene3342;Dbxref=EcoGene:EG12839,GeneID:947774;Name=yrdB;gbkey=Gene;gene=yrdB;gene_biotype=protein_coding;gene_synonym=ECK3267,JW3241;locus_tag=b3280 NC_000913.3 RefSeq CDS 3429766 3430023 . - 0 ID=cds3217;Parent=gene3342;Dbxref=ASAP:ABE-0010761,UniProtKB/Swiss-Prot:P45795,Genbank:NP_417739.1,EcoGene:EG12839,GeneID:947774;Name=NP_417739.1;gbkey=CDS;gene=yrdB;product=DUF1488 family protein;protein_id=NP_417739.1;transl_table=11 NC_000913.3 RefSeq gene 3430020 3430838 . - . ID=gene3343;Dbxref=EcoGene:EG10077,GeneID:947776;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;gene_synonym=ECK3268,JW3242;locus_tag=b3281 NC_000913.3 RefSeq CDS 3430020 3430838 . - 0 ID=cds3218;Parent=gene3343;Dbxref=ASAP:ABE-0010763,UniProtKB/Swiss-Prot:P15770,Genbank:NP_417740.1,EcoGene:EG10077,GeneID:947776;Name=NP_417740.1;Note=dehydroshikimate reductase;gbkey=CDS;gene=aroE;product=dehydroshikimate reductase%2C NAD(P)-binding;protein_id=NP_417740.1;transl_table=11 NC_000913.3 RefSeq gene 3430843 3431415 . - . ID=gene3344;Dbxref=EcoGene:EG12840,GeneID:947783;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;gene_synonym=ECK3269,JW3243,rimN,yrdC;locus_tag=b3282 NC_000913.3 RefSeq CDS 3430843 3431415 . - 0 ID=cds3219;Parent=gene3344;Dbxref=ASAP:ABE-0010766,UniProtKB/Swiss-Prot:P45748,Genbank:NP_417741.1,EcoGene:EG12840,GeneID:947783;Name=NP_417741.1;gbkey=CDS;gene=tsaC;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%2C threonine-dependent ADP-forming ATPase;protein_id=NP_417741.1;transl_table=11 NC_000913.3 RefSeq gene 3431420 3431962 . - . ID=gene3345;Dbxref=EcoGene:EG12841,GeneID:947782;Name=yrdD;gbkey=Gene;gene=yrdD;gene_biotype=protein_coding;gene_synonym=ECK3270,JW5949;locus_tag=b3283 NC_000913.3 RefSeq CDS 3431420 3431962 . - 0 ID=cds3220;Parent=gene3345;Dbxref=ASAP:ABE-0010768,UniProtKB/Swiss-Prot:P45771,Genbank:YP_026210.1,EcoGene:EG12841,GeneID:947782;Name=YP_026210.1;Note=putative DNA topoisomerase;gbkey=CDS;gene=yrdD;product=ssDNA-binding protein%2C function unknown;protein_id=YP_026210.1;transl_table=11 NC_000913.3 RefSeq gene 3431991 3432464 . - . ID=gene3346;Dbxref=EcoGene:EG11605,GeneID:947781;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;gene_synonym=ECK3271,JW3245;locus_tag=b3284 NC_000913.3 RefSeq CDS 3431991 3432464 . - 0 ID=cds3221;Parent=gene3346;Dbxref=ASAP:ABE-0010770,UniProtKB/Swiss-Prot:P0A828,Genbank:NP_417743.1,EcoGene:EG11605,GeneID:947781;Name=NP_417743.1;gbkey=CDS;gene=smg;product=DUF494 family putative periplasmic protein;protein_id=NP_417743.1;transl_table=11 NC_000913.3 RefSeq gene 3432436 3433560 . - . ID=gene3347;Dbxref=EcoGene:EG11604,GeneID:2847708;Name=smf;gbkey=Gene;gene=smf;gene_biotype=protein_coding;gene_synonym=ECK3272,JW5708;locus_tag=b4473 NC_000913.3 RefSeq CDS 3432436 3433560 . - 0 ID=cds3222;Parent=gene3347;Dbxref=ASAP:ABE-0174103,UniProtKB/Swiss-Prot:P30852,Genbank:YP_026211.1,EcoGene:EG11604,GeneID:2847708;Name=YP_026211.1;gbkey=CDS;gene=smf;product=DNA recombination-mediator A family protein;protein_id=YP_026211.1;transl_table=11 NC_000913.3 RefSeq gene 3433690 3434199 . + . ID=gene3348;Dbxref=EcoGene:EG11440,GeneID:947780;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;gene_synonym=ECK3273,fms,JW3248;locus_tag=b3287 NC_000913.3 RefSeq CDS 3433690 3434199 . + 0 ID=cds3223;Parent=gene3348;Dbxref=ASAP:ABE-0010779,UniProtKB/Swiss-Prot:P0A6K3,Genbank:NP_417745.1,EcoGene:EG11440,GeneID:947780;Name=NP_417745.1;gbkey=CDS;gene=def;product=peptide deformylase;protein_id=NP_417745.1;transl_table=11 NC_000913.3 RefSeq gene 3434214 3435161 . + . ID=gene3349;Dbxref=EcoGene:EG11268,GeneID:947779;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;gene_synonym=ECK3274,JW3249,yhdD;locus_tag=b3288 NC_000913.3 RefSeq CDS 3434214 3435161 . + 0 ID=cds3224;Parent=gene3349;Dbxref=ASAP:ABE-0010781,UniProtKB/Swiss-Prot:P23882,Genbank:NP_417746.1,EcoGene:EG11268,GeneID:947779;Name=NP_417746.1;gbkey=CDS;gene=fmt;product=10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase;protein_id=NP_417746.1;transl_table=11 NC_000913.3 RefSeq gene 3435207 3436496 . + . ID=gene3350;Dbxref=EcoGene:EG12163,GeneID:947789;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;gene_synonym=ECK3275,fmu,fmv,JW3250,rrmB,sun,yhdB;locus_tag=b3289 NC_000913.3 RefSeq CDS 3435207 3436496 . + 0 ID=cds3225;Parent=gene3350;Dbxref=ASAP:ABE-0010785,UniProtKB/Swiss-Prot:P36929,Genbank:NP_417747.1,EcoGene:EG12163,GeneID:947789;Name=NP_417747.1;Note=16S rRNA m5C967 methyltransferase;gbkey=CDS;gene=rsmB;product=16S rRNA m(5)C967 methyltransferase%2C SAM-dependent;protein_id=NP_417747.1;transl_table=11 NC_000913.3 RefSeq gene 3436518 3437894 . + . ID=gene3351;Dbxref=EcoGene:EG11019,GeneID:947788;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=ECK3276,JW3251,sapG;locus_tag=b3290 NC_000913.3 RefSeq CDS 3436518 3437894 . + 0 ID=cds3226;Parent=gene3351;Dbxref=ASAP:ABE-0010787,UniProtKB/Swiss-Prot:P0AGI8,Genbank:NP_417748.1,EcoGene:EG11019,GeneID:947788;Name=NP_417748.1;Note=transport of potassium;gbkey=CDS;gene=trkA;product=NAD-binding component of TrK potassium transporter;protein_id=NP_417748.1;transl_table=11 NC_000913.3 RefSeq gene 3438024 3438434 . + . ID=gene3352;Dbxref=EcoGene:EG11180,GeneID:947787;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;gene_synonym=ECK3277,JW3252,stkA,yhdC;locus_tag=b3291 NC_000913.3 RefSeq CDS 3438024 3438434 . + 0 ID=cds3227;Parent=gene3352;Dbxref=ASAP:ABE-0010790,UniProtKB/Swiss-Prot:P0A742,Genbank:NP_417749.1,EcoGene:EG11180,GeneID:947787;Name=NP_417749.1;gbkey=CDS;gene=mscL;product=mechanosensitive channel protein%2C high conductance;protein_id=NP_417749.1;transl_table=11 NC_000913.3 RefSeq gene 3438431 3438649 . - . ID=gene3353;Dbxref=EcoGene:EG11968,GeneID:1450289;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;gene_synonym=ECK3278,JW3253,yhdL;locus_tag=b4550 NC_000913.3 RefSeq CDS 3438431 3438649 . - 0 ID=cds3228;Parent=gene3353;Dbxref=ASAP:ABE-0285071,UniProtKB/Swiss-Prot:P36675,Genbank:YP_588467.1,EcoGene:EG11968,GeneID:1450289;Name=YP_588467.1;gbkey=CDS;gene=arfA;product=alternate ribosome-rescue factor A;protein_id=YP_588467.1;transl_table=11 NC_000913.3 RefSeq gene 3438705 3439130 . - . ID=gene3354;Dbxref=EcoGene:EG11969,GeneID:947786;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;gene_synonym=ECK3279,JW3254,yhdM;locus_tag=b3292 NC_000913.3 RefSeq CDS 3438705 3439130 . - 0 ID=cds3229;Parent=gene3354;Dbxref=ASAP:ABE-0010793,UniProtKB/Swiss-Prot:P0ACS5,Genbank:NP_417751.1,EcoGene:EG11969,GeneID:947786;Name=NP_417751.1;gbkey=CDS;gene=zntR;product=zntA gene transcriptional activator;protein_id=NP_417751.1;transl_table=11 NC_000913.3 RefSeq gene 3439141 3439509 . - . ID=gene3355;Dbxref=EcoGene:EG11970,GeneID:947785;Name=yhdN;gbkey=Gene;gene=yhdN;gene_biotype=protein_coding;gene_synonym=ECK3280,JW3255;locus_tag=b3293 NC_000913.3 RefSeq CDS 3439141 3439509 . - 0 ID=cds3230;Parent=gene3355;Dbxref=ASAP:ABE-0010795,UniProtKB/Swiss-Prot:P36677,Genbank:NP_417752.1,EcoGene:EG11970,GeneID:947785;Name=NP_417752.1;gbkey=CDS;gene=yhdN;product=DUF1992 family protein;protein_id=NP_417752.1;transl_table=11 NC_000913.3 RefSeq gene 3439616 3439999 . - . ID=gene3356;Dbxref=EcoGene:EG10878,GeneID:947784;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;gene_synonym=ECK3281,JW3256;locus_tag=b3294 NC_000913.3 RefSeq CDS 3439616 3439999 . - 0 ID=cds3231;Parent=gene3356;Dbxref=ASAP:ABE-0010799,UniProtKB/Swiss-Prot:P0AG44,Genbank:NP_417753.1,EcoGene:EG10878,GeneID:947784;Name=NP_417753.1;gbkey=CDS;gene=rplQ;product=50S ribosomal subunit protein L17;protein_id=NP_417753.1;transl_table=11 NC_000913.3 RefSeq gene 3440040 3441029 . - . ID=gene3357;Dbxref=EcoGene:EG10893,GeneID:947794;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;gene_synonym=ECK3282,JW3257,pez,phs,sez;locus_tag=b3295 NC_000913.3 RefSeq CDS 3440040 3441029 . - 0 ID=cds3232;Parent=gene3357;Dbxref=ASAP:ABE-0010802,UniProtKB/Swiss-Prot:P0A7Z4,Genbank:NP_417754.1,EcoGene:EG10893,GeneID:947794;Name=NP_417754.1;gbkey=CDS;gene=rpoA;product=RNA polymerase%2C alpha subunit;protein_id=NP_417754.1;transl_table=11 NC_000913.3 RefSeq gene 3441055 3441675 . - . ID=gene3358;Dbxref=EcoGene:EG10903,GeneID:947793;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;gene_synonym=ECK3283,JW3258,ramA,sud;locus_tag=b3296 NC_000913.3 RefSeq CDS 3441055 3441675 . - 0 ID=cds3233;Parent=gene3358;Dbxref=ASAP:ABE-0010805,UniProtKB/Swiss-Prot:P0A7V8,Genbank:NP_417755.1,EcoGene:EG10903,GeneID:947793;Name=NP_417755.1;gbkey=CDS;gene=rpsD;product=30S ribosomal subunit protein S4;protein_id=NP_417755.1;transl_table=11 NC_000913.3 RefSeq gene 3441709 3442098 . - . ID=gene3359;Dbxref=EcoGene:EG10910,GeneID:947792;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;gene_synonym=ECK3284,JW3259;locus_tag=b3297 NC_000913.3 RefSeq CDS 3441709 3442098 . - 0 ID=cds3234;Parent=gene3359;Dbxref=ASAP:ABE-0010807,UniProtKB/Swiss-Prot:P0A7R9,Genbank:NP_417756.1,EcoGene:EG10910,GeneID:947792;Name=NP_417756.1;gbkey=CDS;gene=rpsK;product=30S ribosomal subunit protein S11;protein_id=NP_417756.1;transl_table=11 NC_000913.3 RefSeq gene 3442115 3442471 . - . ID=gene3360;Dbxref=EcoGene:EG10912,GeneID:947791;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;gene_synonym=ECK3285,JW3260;locus_tag=b3298 NC_000913.3 RefSeq CDS 3442115 3442471 . - 0 ID=cds3235;Parent=gene3360;Dbxref=ASAP:ABE-0010809,UniProtKB/Swiss-Prot:P0A7S9,Genbank:NP_417757.1,EcoGene:EG10912,GeneID:947791;Name=NP_417757.1;gbkey=CDS;gene=rpsM;product=30S ribosomal subunit protein S13;protein_id=NP_417757.1;transl_table=11 NC_000913.3 RefSeq gene 3442618 3442734 . - . ID=gene3361;Dbxref=EcoGene:EG11232,GeneID:947805;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;gene_synonym=ECK3286,JW3261,secX;locus_tag=b3299 NC_000913.3 RefSeq CDS 3442618 3442734 . - 0 ID=cds3236;Parent=gene3361;Dbxref=ASAP:ABE-0010812,UniProtKB/Swiss-Prot:P0A7Q6,Genbank:NP_417758.1,EcoGene:EG11232,GeneID:947805;Name=NP_417758.1;gbkey=CDS;gene=rpmJ;product=50S ribosomal subunit protein L36;protein_id=NP_417758.1;transl_table=11 NC_000913.3 RefSeq gene 3442766 3444097 . - . ID=gene3362;Dbxref=EcoGene:EG10766,GeneID:947799;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;gene_synonym=ECK3287,JW3262,prlA;locus_tag=b3300 NC_000913.3 RefSeq CDS 3442766 3444097 . - 0 ID=cds3237;Parent=gene3362;Dbxref=ASAP:ABE-0010814,UniProtKB/Swiss-Prot:P0AGA2,Genbank:NP_417759.1,EcoGene:EG10766,GeneID:947799;Name=NP_417759.1;Note=putative ATPase subunit of translocase;gbkey=CDS;gene=secY;product=preprotein translocase membrane subunit;protein_id=NP_417759.1;transl_table=11 NC_000913.3 RefSeq gene 3444105 3444539 . - . ID=gene3363;Dbxref=EcoGene:EG10876,GeneID:947798;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;gene_synonym=ECK3288,JW3263;locus_tag=b3301 NC_000913.3 RefSeq CDS 3444105 3444539 . - 0 ID=cds3238;Parent=gene3363;Dbxref=ASAP:ABE-0010819,UniProtKB/Swiss-Prot:P02413,Genbank:NP_417760.1,EcoGene:EG10876,GeneID:947798;Name=NP_417760.1;gbkey=CDS;gene=rplO;product=50S ribosomal subunit protein L15;protein_id=NP_417760.1;transl_table=11 NC_000913.3 RefSeq gene 3444543 3444722 . - . ID=gene3364;Dbxref=EcoGene:EG10888,GeneID:947797;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;gene_synonym=ECK3289,JW3264;locus_tag=b3302 NC_000913.3 RefSeq CDS 3444543 3444722 . - 0 ID=cds3239;Parent=gene3364;Dbxref=ASAP:ABE-0010821,UniProtKB/Swiss-Prot:P0AG51,Genbank:NP_417761.1,EcoGene:EG10888,GeneID:947797;Name=NP_417761.1;gbkey=CDS;gene=rpmD;product=50S ribosomal subunit protein L30;protein_id=NP_417761.1;transl_table=11 NC_000913.3 RefSeq gene 3444726 3445229 . - . ID=gene3365;Dbxref=EcoGene:EG10904,GeneID:947795;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;gene_synonym=ECK3290,eps,JW3265,spc,spcA;locus_tag=b3303 NC_000913.3 RefSeq CDS 3444726 3445229 . - 0 ID=cds3240;Parent=gene3365;Dbxref=ASAP:ABE-0010823,UniProtKB/Swiss-Prot:P0A7W1,Genbank:NP_417762.1,EcoGene:EG10904,GeneID:947795;Name=NP_417762.1;gbkey=CDS;gene=rpsE;product=30S ribosomal subunit protein S5;protein_id=NP_417762.1;transl_table=11 NC_000913.3 RefSeq gene 3445244 3445597 . - . ID=gene3366;Dbxref=EcoGene:EG10879,GeneID:947804;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;gene_synonym=ECK3291,JW3266;locus_tag=b3304 NC_000913.3 RefSeq CDS 3445244 3445597 . - 0 ID=cds3241;Parent=gene3366;Dbxref=ASAP:ABE-0010825,UniProtKB/Swiss-Prot:P0C018,Genbank:NP_417763.1,EcoGene:EG10879,GeneID:947804;Name=NP_417763.1;gbkey=CDS;gene=rplR;product=50S ribosomal subunit protein L18;protein_id=NP_417763.1;transl_table=11 NC_000913.3 RefSeq gene 3445607 3446140 . - . ID=gene3367;Dbxref=EcoGene:EG10869,GeneID:947803;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;gene_synonym=ECK3292,JW3267;locus_tag=b3305 NC_000913.3 RefSeq CDS 3445607 3446140 . - 0 ID=cds3242;Parent=gene3367;Dbxref=ASAP:ABE-0010827,UniProtKB/Swiss-Prot:P0AG55,Genbank:NP_417764.1,EcoGene:EG10869,GeneID:947803;Name=NP_417764.1;gbkey=CDS;gene=rplF;product=50S ribosomal subunit protein L6;protein_id=NP_417764.1;transl_table=11 NC_000913.3 RefSeq gene 3446153 3446545 . - . ID=gene3368;Dbxref=EcoGene:EG10907,GeneID:947802;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;gene_synonym=ECK3293,JW3268;locus_tag=b3306 NC_000913.3 RefSeq CDS 3446153 3446545 . - 0 ID=cds3243;Parent=gene3368;Dbxref=ASAP:ABE-0010829,UniProtKB/Swiss-Prot:P0A7W7,Genbank:NP_417765.1,EcoGene:EG10907,GeneID:947802;Name=NP_417765.1;Note=30S ribosomal subunit protein S8%2C and regulator;gbkey=CDS;gene=rpsH;product=30S ribosomal subunit protein S8;protein_id=NP_417765.1;transl_table=11 NC_000913.3 RefSeq gene 3446579 3446884 . - . ID=gene3369;Dbxref=EcoGene:EG10913,GeneID:947801;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;gene_synonym=ECK3294,JW3269;locus_tag=b3307 NC_000913.3 RefSeq CDS 3446579 3446884 . - 0 ID=cds3244;Parent=gene3369;Dbxref=ASAP:ABE-0010831,UniProtKB/Swiss-Prot:P0AG59,Genbank:NP_417766.1,EcoGene:EG10913,GeneID:947801;Name=NP_417766.1;gbkey=CDS;gene=rpsN;product=30S ribosomal subunit protein S14;protein_id=NP_417766.1;transl_table=11 NC_000913.3 RefSeq gene 3446899 3447438 . - . ID=gene3370;Dbxref=EcoGene:EG10868,GeneID:947800;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;gene_synonym=ECK3295,JW3270;locus_tag=b3308 NC_000913.3 RefSeq CDS 3446899 3447438 . - 0 ID=cds3245;Parent=gene3370;Dbxref=ASAP:ABE-0010833,UniProtKB/Swiss-Prot:P62399,Genbank:NP_417767.1,EcoGene:EG10868,GeneID:947800;Name=NP_417767.1;gbkey=CDS;gene=rplE;product=50S ribosomal subunit protein L5;protein_id=NP_417767.1;transl_table=11 NC_000913.3 RefSeq gene 3447453 3447767 . - . ID=gene3371;Dbxref=EcoGene:EG10884,GeneID:947810;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;gene_synonym=ECK3296,JW3271;locus_tag=b3309 NC_000913.3 RefSeq CDS 3447453 3447767 . - 0 ID=cds3246;Parent=gene3371;Dbxref=ASAP:ABE-0010835,UniProtKB/Swiss-Prot:P60624,Genbank:NP_417768.1,EcoGene:EG10884,GeneID:947810;Name=NP_417768.1;gbkey=CDS;gene=rplX;product=50S ribosomal subunit protein L24;protein_id=NP_417768.1;transl_table=11 NC_000913.3 RefSeq gene 3447778 3448149 . - . ID=gene3372;Dbxref=EcoGene:EG10875,GeneID:947809;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;gene_synonym=ECK3297,JW3272;locus_tag=b3310 NC_000913.3 RefSeq CDS 3447778 3448149 . - 0 ID=cds3247;Parent=gene3372;Dbxref=ASAP:ABE-0010837,UniProtKB/Swiss-Prot:P0ADY3,Genbank:NP_417769.1,EcoGene:EG10875,GeneID:947809;Name=NP_417769.1;gbkey=CDS;gene=rplN;product=50S ribosomal subunit protein L14;protein_id=NP_417769.1;transl_table=11 NC_000913.3 RefSeq gene 3448314 3448568 . - . ID=gene3373;Dbxref=EcoGene:EG10916,GeneID:947808;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;gene_synonym=ECK3298,JW3273,neaA;locus_tag=b3311 NC_000913.3 RefSeq CDS 3448314 3448568 . - 0 ID=cds3248;Parent=gene3373;Dbxref=ASAP:ABE-0010840,UniProtKB/Swiss-Prot:P0AG63,Genbank:NP_417770.1,EcoGene:EG10916,GeneID:947808;Name=NP_417770.1;gbkey=CDS;gene=rpsQ;product=30S ribosomal subunit protein S17;protein_id=NP_417770.1;transl_table=11 NC_000913.3 RefSeq gene 3448568 3448759 . - . ID=gene3374;Dbxref=EcoGene:EG10887,GeneID:947807;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;gene_synonym=ECK3299,JW3274;locus_tag=b3312 NC_000913.3 RefSeq CDS 3448568 3448759 . - 0 ID=cds3249;Parent=gene3374;Dbxref=ASAP:ABE-0010842,UniProtKB/Swiss-Prot:P0A7M6,Genbank:NP_417771.1,EcoGene:EG10887,GeneID:947807;Name=NP_417771.1;gbkey=CDS;gene=rpmC;product=50S ribosomal subunit protein L29;protein_id=NP_417771.1;transl_table=11 NC_000913.3 RefSeq gene 3448759 3449169 . - . ID=gene3375;Dbxref=EcoGene:EG10877,GeneID:947806;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;gene_synonym=ECK3300,JW3275;locus_tag=b3313 NC_000913.3 RefSeq CDS 3448759 3449169 . - 0 ID=cds3250;Parent=gene3375;Dbxref=ASAP:ABE-0010846,UniProtKB/Swiss-Prot:P0ADY7,Genbank:NP_417772.1,EcoGene:EG10877,GeneID:947806;Name=NP_417772.1;gbkey=CDS;gene=rplP;product=50S ribosomal subunit protein L16;protein_id=NP_417772.1;transl_table=11 NC_000913.3 RefSeq gene 3449182 3449883 . - . ID=gene3376;Dbxref=EcoGene:EG10902,GeneID:947814;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;gene_synonym=ECK3301,JW3276;locus_tag=b3314 NC_000913.3 RefSeq CDS 3449182 3449883 . - 0 ID=cds3251;Parent=gene3376;Dbxref=ASAP:ABE-0010848,UniProtKB/Swiss-Prot:P0A7V3,Genbank:NP_417773.1,EcoGene:EG10902,GeneID:947814;Name=NP_417773.1;gbkey=CDS;gene=rpsC;product=30S ribosomal subunit protein S3;protein_id=NP_417773.1;transl_table=11 NC_000913.3 RefSeq gene 3449901 3450233 . - . ID=gene3377;Dbxref=EcoGene:EG10882,GeneID:947813;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;gene_synonym=ECK3302,eryB,JW3277;locus_tag=b3315 NC_000913.3 RefSeq CDS 3449901 3450233 . - 0 ID=cds3252;Parent=gene3377;Dbxref=ASAP:ABE-0010850,UniProtKB/Swiss-Prot:P61175,Genbank:NP_417774.1,EcoGene:EG10882,GeneID:947813;Name=NP_417774.1;gbkey=CDS;gene=rplV;product=50S ribosomal subunit protein L22;protein_id=NP_417774.1;transl_table=11 NC_000913.3 RefSeq gene 3450248 3450526 . - . ID=gene3378;Dbxref=EcoGene:EG10918,GeneID:947811;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;gene_synonym=ECK3303,JW3278;locus_tag=b3316 NC_000913.3 RefSeq CDS 3450248 3450526 . - 0 ID=cds3253;Parent=gene3378;Dbxref=ASAP:ABE-0010852,UniProtKB/Swiss-Prot:P0A7U3,Genbank:NP_417775.1,EcoGene:EG10918,GeneID:947811;Name=NP_417775.1;gbkey=CDS;gene=rpsS;product=30S ribosomal subunit protein S19;protein_id=NP_417775.1;transl_table=11 NC_000913.3 RefSeq gene 3450543 3451364 . - . ID=gene3379;Dbxref=EcoGene:EG10865,GeneID:947820;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;gene_synonym=ECK3304,JW3279;locus_tag=b3317 NC_000913.3 RefSeq CDS 3450543 3451364 . - 0 ID=cds3254;Parent=gene3379;Dbxref=ASAP:ABE-0010854,UniProtKB/Swiss-Prot:P60422,Genbank:NP_417776.1,EcoGene:EG10865,GeneID:947820;Name=NP_417776.1;gbkey=CDS;gene=rplB;product=50S ribosomal subunit protein L2;protein_id=NP_417776.1;transl_table=11 NC_000913.3 RefSeq gene 3451382 3451684 . - . ID=gene3380;Dbxref=EcoGene:EG10883,GeneID:947819;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;gene_synonym=ECK3305,JW3280;locus_tag=b3318 NC_000913.3 RefSeq CDS 3451382 3451684 . - 0 ID=cds3255;Parent=gene3380;Dbxref=ASAP:ABE-0010856,UniProtKB/Swiss-Prot:P0ADZ0,Genbank:NP_417777.1,EcoGene:EG10883,GeneID:947819;Name=NP_417777.1;gbkey=CDS;gene=rplW;product=50S ribosomal subunit protein L23;protein_id=NP_417777.1;transl_table=11 NC_000913.3 RefSeq gene 3451681 3452286 . - . ID=gene3381;Dbxref=EcoGene:EG10867,GeneID:947818;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;gene_synonym=ECK3306,eryA,JW3281;locus_tag=b3319 NC_000913.3 RefSeq CDS 3451681 3452286 . - 0 ID=cds3256;Parent=gene3381;Dbxref=ASAP:ABE-0010858,UniProtKB/Swiss-Prot:P60723,Genbank:NP_417778.1,EcoGene:EG10867,GeneID:947818;Name=NP_417778.1;Note=50S ribosomal subunit protein L4%2C regulates expression of S10 operon;gbkey=CDS;gene=rplD;product=50S ribosomal subunit protein L4;protein_id=NP_417778.1;transl_table=11 NC_000913.3 RefSeq gene 3452297 3452926 . - . ID=gene3382;Dbxref=EcoGene:EG10866,GeneID:947817;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;gene_synonym=ECK3307,JW3282;locus_tag=b3320 NC_000913.3 RefSeq CDS 3452297 3452926 . - 0 ID=cds3257;Parent=gene3382;Dbxref=ASAP:ABE-0010860,UniProtKB/Swiss-Prot:P60438,Genbank:NP_417779.1,EcoGene:EG10866,GeneID:947817;Name=NP_417779.1;gbkey=CDS;gene=rplC;product=50S ribosomal subunit protein L3;protein_id=NP_417779.1;transl_table=11 NC_000913.3 RefSeq gene 3452959 3453270 . - . ID=gene3383;Dbxref=EcoGene:EG10909,GeneID:947816;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=ECK3308,JW3283,nusE;locus_tag=b3321 NC_000913.3 RefSeq CDS 3452959 3453270 . - 0 ID=cds3258;Parent=gene3383;Dbxref=ASAP:ABE-0010862,UniProtKB/Swiss-Prot:P0A7R5,Genbank:NP_417780.1,EcoGene:EG10909,GeneID:947816;Name=NP_417780.1;gbkey=CDS;gene=rpsJ;product=30S ribosomal subunit protein S10;protein_id=NP_417780.1;transl_table=11 NC_000913.3 RefSeq gene 3453508 3453927 . - . ID=gene3384;Dbxref=EcoGene:EG11263,GeneID:947826;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;gene_synonym=ECK3309,JW3284,pinO,pioO;locus_tag=b3322 NC_000913.3 RefSeq CDS 3453508 3453927 . - 0 ID=cds3259;Parent=gene3384;Dbxref=ASAP:ABE-0010865,UniProtKB/Swiss-Prot:P03825,Genbank:NP_417781.1,EcoGene:EG11263,GeneID:947826;Name=NP_417781.1;Note=calcium-binding protein required for initiation of chromosome replication;gbkey=CDS;gene=gspB;product=part of gsp divergon involved in type II protein secretion;protein_id=NP_417781.1;transl_table=11 NC_000913.3 RefSeq gene 3453929 3455398 . - . ID=gene3385;Dbxref=EcoGene:EG12888,GeneID:947825;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;gene_synonym=ECK3310,JW3285,yheD;locus_tag=b3323 NC_000913.3 RefSeq CDS 3453929 3455398 . - 0 ID=cds3260;Parent=gene3385;Dbxref=ASAP:ABE-0010867,UniProtKB/Swiss-Prot:P45756,Genbank:NP_417782.1,EcoGene:EG12888,GeneID:947825;Name=NP_417782.1;Note=putative export protein A for general secretion pathway (GSP);gbkey=CDS;gene=gspA;product=general secretory pathway component%2C cryptic;protein_id=NP_417782.1;transl_table=11 NC_000913.3 RefSeq gene 3455578 3456393 . + . ID=gene3386;Dbxref=EcoGene:EG12889,GeneID:947824;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;gene_synonym=ECK3311,JW3286,yheE;locus_tag=b3324 NC_000913.3 RefSeq CDS 3455578 3456393 . + 0 ID=cds3261;Parent=gene3386;Dbxref=ASAP:ABE-0010877,UniProtKB/Swiss-Prot:P45757,Genbank:NP_417783.1,EcoGene:EG12889,GeneID:947824;Name=NP_417783.1;gbkey=CDS;gene=gspC;product=general secretory pathway component%2C cryptic;protein_id=NP_417783.1;transl_table=11 NC_000913.3 RefSeq gene 3456377 3458329 . + . ID=gene3387;Dbxref=EcoGene:EG12890,GeneID:947822;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;gene_synonym=ECK3312,JW5707,yheF;locus_tag=b3325 NC_000913.3 RefSeq CDS 3456377 3458329 . + 0 ID=cds3262;Parent=gene3387;Dbxref=ASAP:ABE-0010879,UniProtKB/Swiss-Prot:P45758,Genbank:NP_417784.4,EcoGene:EG12890,GeneID:947822;Name=NP_417784.4;gbkey=CDS;gene=gspD;product=general secretory pathway component%2C cryptic;protein_id=NP_417784.4;transl_table=11 NC_000913.3 RefSeq gene 3458339 3459820 . + . ID=gene3388;Dbxref=EcoGene:EG12891,GeneID:947823;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;gene_synonym=ECK3313,JW3288,yheG;locus_tag=b3326 NC_000913.3 RefSeq CDS 3458339 3459820 . + 0 ID=cds3263;Parent=gene3388;Dbxref=ASAP:ABE-0010881,UniProtKB/Swiss-Prot:P45759,Genbank:NP_417785.1,EcoGene:EG12891,GeneID:947823;Name=NP_417785.1;gbkey=CDS;gene=gspE;product=general secretory pathway component%2C cryptic;protein_id=NP_417785.1;transl_table=11 NC_000913.3 RefSeq gene 3459817 3461013 . + . ID=gene3389;Dbxref=EcoGene:EG12885,GeneID:947829;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;gene_synonym=ECK3314,hofF,hopF,JW3289;locus_tag=b3327 NC_000913.3 RefSeq CDS 3459817 3461013 . + 0 ID=cds3264;Parent=gene3389;Dbxref=ASAP:ABE-0010883,UniProtKB/Swiss-Prot:P41441,Genbank:NP_417786.1,EcoGene:EG12885,GeneID:947829;Name=NP_417786.1;gbkey=CDS;gene=gspF;product=general secretory pathway component%2C cryptic;protein_id=NP_417786.1;transl_table=11 NC_000913.3 RefSeq gene 3461023 3461460 . + . ID=gene3390;Dbxref=EcoGene:EG12886,GeneID:947827;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;gene_synonym=ECK3315,hofG,hopG,JW3290;locus_tag=b3328 NC_000913.3 RefSeq CDS 3461023 3461460 . + 0 ID=cds3265;Parent=gene3390;Dbxref=ASAP:ABE-0010885,UniProtKB/Swiss-Prot:P41442,Genbank:NP_417787.1,EcoGene:EG12886,GeneID:947827;Name=NP_417787.1;gbkey=CDS;gene=gspG;product=pseudopilin%2C cryptic%2C general secretion pathway;protein_id=NP_417787.1;transl_table=11 NC_000913.3 RefSeq gene 3461468 3461977 . + . ID=gene3391;Dbxref=EcoGene:EG12887,GeneID:947834;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;gene_synonym=ECK3316,hofH,hopH,JW3291;locus_tag=b3329 NC_000913.3 RefSeq CDS 3461468 3461977 . + 0 ID=cds3266;Parent=gene3391;Dbxref=ASAP:ABE-0010888,UniProtKB/Swiss-Prot:P41443,Genbank:NP_417788.1,EcoGene:EG12887,GeneID:947834;Name=NP_417788.1;gbkey=CDS;gene=gspH;product=putative general secretory pathway component%2C cryptic;protein_id=NP_417788.1;transl_table=11 NC_000913.3 RefSeq gene 3461974 3462351 . + . ID=gene3392;Dbxref=EcoGene:EG12892,GeneID:947833;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;gene_synonym=ECK3317,JW5706,yheH;locus_tag=b3330 NC_000913.3 RefSeq CDS 3461974 3462351 . + 0 ID=cds3267;Parent=gene3392;Dbxref=ASAP:ABE-0010890,UniProtKB/Swiss-Prot:P45760,Genbank:NP_417789.4,EcoGene:EG12892,GeneID:947833;Name=NP_417789.4;gbkey=CDS;gene=gspI;product=general secretory pathway component%2C cryptic;protein_id=NP_417789.4;transl_table=11 NC_000913.3 RefSeq gene 3462344 3462931 . + . ID=gene3393;Dbxref=EcoGene:EG12893,GeneID:947832;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;gene_synonym=ECK3318,JW3293,yheI;locus_tag=b3331 NC_000913.3 RefSeq CDS 3462344 3462931 . + 0 ID=cds3268;Parent=gene3393;Dbxref=ASAP:ABE-0010892,UniProtKB/Swiss-Prot:P45761,Genbank:NP_417790.1,EcoGene:EG12893,GeneID:947832;Name=NP_417790.1;gbkey=CDS;gene=gspJ;product=putative general secretory pathway component%2C cryptic;protein_id=NP_417790.1;transl_table=11 NC_000913.3 RefSeq gene 3462924 3463907 . + . ID=gene3394;Dbxref=EcoGene:EG12894,GeneID:947831;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;gene_synonym=ECK3319,JW3294,yheJ;locus_tag=b3332 NC_000913.3 RefSeq CDS 3462924 3463907 . + 0 ID=cds3269;Parent=gene3394;Dbxref=ASAP:ABE-0010894,UniProtKB/Swiss-Prot:P45762,Genbank:NP_417791.1,EcoGene:EG12894,GeneID:947831;Name=NP_417791.1;gbkey=CDS;gene=gspK;product=general secretory pathway component%2C cryptic;protein_id=NP_417791.1;transl_table=11 NC_000913.3 RefSeq gene 3463922 3465085 . + . ID=gene3395;Dbxref=EcoGene:EG12895,GeneID:947842;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;gene_synonym=ECK3320,JW5705,yheK;locus_tag=b3333 NC_000913.3 RefSeq CDS 3463922 3465085 . + 0 ID=cds3270;Parent=gene3395;Dbxref=ASAP:ABE-0010896,UniProtKB/Swiss-Prot:P45763,Genbank:NP_417792.2,EcoGene:EG12895,GeneID:947842;Name=NP_417792.2;gbkey=CDS;gene=gspL;product=general secretory pathway component%2C cryptic;protein_id=NP_417792.2;transl_table=11 NC_000913.3 RefSeq gene 3465082 3465543 . + . ID=gene3396;Dbxref=EcoGene:EG12173,GeneID:947841;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;gene_synonym=ECK3321,hopZ,JW5704,pshM;locus_tag=b3334 NC_000913.3 RefSeq CDS 3465082 3465543 . + 0 ID=cds3271;Parent=gene3396;Dbxref=ASAP:ABE-0010898,UniProtKB/Swiss-Prot:P36678,Genbank:NP_417793.2,EcoGene:EG12173,GeneID:947841;Name=NP_417793.2;gbkey=CDS;gene=gspM;product=general secretory pathway component%2C cryptic;protein_id=NP_417793.2;transl_table=11 NC_000913.3 RefSeq gene 3465543 3466220 . + . ID=gene3397;Dbxref=EcoGene:EG11359,GeneID:947840;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;gene_synonym=ECK3322,hofD,hopD,hopO,JW3297,yheC;locus_tag=b3335 NC_000913.3 RefSeq CDS 3465543 3466220 . + 0 ID=cds3272;Parent=gene3397;Dbxref=ASAP:ABE-0010901,UniProtKB/Swiss-Prot:P25960,Genbank:NP_417794.1,EcoGene:EG11359,GeneID:947840;Name=NP_417794.1;gbkey=CDS;gene=gspO;product=bifunctional prepilin leader peptidase/ methylase;protein_id=NP_417794.1;transl_table=11 NC_000913.3 RefSeq gene 3466249 3466725 . - . ID=gene3398;Dbxref=EcoGene:EG10113,GeneID:947839;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;gene_synonym=ECK3323,JW3298;locus_tag=b3336 NC_000913.3 RefSeq CDS 3466249 3466725 . - 0 ID=cds3273;Parent=gene3398;Dbxref=ASAP:ABE-0010903,UniProtKB/Swiss-Prot:P0ABD3,Genbank:NP_417795.1,EcoGene:EG10113,GeneID:947839;Name=NP_417795.1;Note=bacterioferrin%2C an iron storage homoprotein;gbkey=CDS;gene=bfr;product=bacterioferritin%2C iron storage and detoxification protein;protein_id=NP_417795.1;transl_table=11 NC_000913.3 RefSeq gene 3466797 3466991 . - . ID=gene3399;Dbxref=EcoGene:EG11181,GeneID:947836;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;gene_synonym=ECK3324,JW3299,yheA;locus_tag=b3337 NC_000913.3 RefSeq CDS 3466797 3466991 . - 0 ID=cds3274;Parent=gene3399;Dbxref=ASAP:ABE-0010906,UniProtKB/Swiss-Prot:P0AE56,Genbank:NP_417796.1,EcoGene:EG11181,GeneID:947836;Name=NP_417796.1;gbkey=CDS;gene=bfd;product=bacterioferritin-associated ferredoxin;protein_id=NP_417796.1;transl_table=11 NC_000913.3 RefSeq gene 3467160 3469853 . - . ID=gene3400;Dbxref=EcoGene:EG11237,GeneID:947837;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;gene_synonym=ECK3325,JW3300,yheB;locus_tag=b3338 NC_000913.3 RefSeq CDS 3467160 3469853 . - 0 ID=cds3275;Parent=gene3400;Dbxref=ASAP:ABE-0010909,UniProtKB/Swiss-Prot:P13656,Genbank:NP_417797.1,EcoGene:EG11237,GeneID:947837;Name=NP_417797.1;gbkey=CDS;gene=chiA;product=periplasmic endochitinase;protein_id=NP_417797.1;transl_table=11 NC_000913.3 RefSeq gene 3470145 3471329 . - . ID=gene3401;Dbxref=EcoGene:EG11036,GeneID:947838;Name=tufA;gbkey=Gene;gene=tufA;gene_biotype=protein_coding;gene_synonym=ECK3326,JW3301,kirT,pulT;locus_tag=b3339 NC_000913.3 RefSeq CDS 3470145 3471329 . - 0 ID=cds3276;Parent=gene3401;Dbxref=ASAP:ABE-0010912,UniProtKB/Swiss-Prot:P0CE47,Genbank:NP_417798.1,EcoGene:EG11036,GeneID:947838;Name=NP_417798.1;gbkey=CDS;gene=tufA;product=translation elongation factor EF-Tu 1;protein_id=NP_417798.1;transl_table=11 NC_000913.3 RefSeq gene 3471400 3473514 . - . ID=gene3402;Dbxref=EcoGene:EG10360,GeneID:947847;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;gene_synonym=ECK3327,far,fus,JW3302;locus_tag=b3340 NC_000913.3 RefSeq CDS 3471400 3473514 . - 0 ID=cds3277;Parent=gene3402;Dbxref=ASAP:ABE-0010914,UniProtKB/Swiss-Prot:P0A6M8,Genbank:NP_417799.1,EcoGene:EG10360,GeneID:947847;Name=NP_417799.1;Note=GTP-binding protein chain elongation factor EF-G;gbkey=CDS;gene=fusA;product=protein chain elongation factor EF-G%2C GTP-binding;protein_id=NP_417799.1;transl_table=11 NC_000913.3 RefSeq gene 3473542 3474081 . - . ID=gene3403;Dbxref=EcoGene:EG10906,GeneID:947846;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;gene_synonym=ECK3328,JW3303;locus_tag=b3341 NC_000913.3 RefSeq CDS 3473542 3474081 . - 0 ID=cds3278;Parent=gene3403;Dbxref=ASAP:ABE-0010917,UniProtKB/Swiss-Prot:P02359,Genbank:NP_417800.1,EcoGene:EG10906,GeneID:947846;Name=NP_417800.1;Note=30S ribosomal subunit protein S7%2C initiates assembly;gbkey=CDS;gene=rpsG;product=30S ribosomal subunit protein S7;protein_id=NP_417800.1;transl_table=11 NC_000913.3 RefSeq gene 3474178 3474552 . - . ID=gene3404;Dbxref=EcoGene:EG10911,GeneID:947845;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;gene_synonym=asuB,ECK3329,JW3304,strA;locus_tag=b3342 NC_000913.3 RefSeq CDS 3474178 3474552 . - 0 ID=cds3279;Parent=gene3404;Dbxref=ASAP:ABE-0010919,UniProtKB/Swiss-Prot:P0A7S3,Genbank:NP_417801.1,EcoGene:EG10911,GeneID:947845;Name=NP_417801.1;gbkey=CDS;gene=rpsL;product=30S ribosomal subunit protein S12;protein_id=NP_417801.1;transl_table=11 NC_000913.3 RefSeq gene 3474678 3474965 . - . ID=gene3405;Dbxref=EcoGene:EG12896,GeneID:947844;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;gene_synonym=ECK3330,JW3305,yheL;locus_tag=b3343 NC_000913.3 RefSeq CDS 3474678 3474965 . - 0 ID=cds3280;Parent=gene3405;Dbxref=ASAP:ABE-0010922,UniProtKB/Swiss-Prot:P45530,Genbank:NP_417802.1,EcoGene:EG12896,GeneID:947844;Name=NP_417802.1;gbkey=CDS;gene=tusB;product=mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein;protein_id=NP_417802.1;transl_table=11 NC_000913.3 RefSeq gene 3474973 3475332 . - . ID=gene3406;Dbxref=EcoGene:EG12897,GeneID:947853;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;gene_synonym=ECK3331,JW3306,yheM;locus_tag=b3344 NC_000913.3 RefSeq CDS 3474973 3475332 . - 0 ID=cds3281;Parent=gene3406;Dbxref=ASAP:ABE-0010928,UniProtKB/Swiss-Prot:P45531,Genbank:NP_417803.1,EcoGene:EG12897,GeneID:947853;Name=NP_417803.1;gbkey=CDS;gene=tusC;product=mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein;protein_id=NP_417803.1;transl_table=11 NC_000913.3 RefSeq gene 3475332 3475718 . - . ID=gene3407;Dbxref=EcoGene:EG12898,GeneID:947852;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;gene_synonym=ECK3332,JW3307,yheN;locus_tag=b3345 NC_000913.3 RefSeq CDS 3475332 3475718 . - 0 ID=cds3282;Parent=gene3407;Dbxref=ASAP:ABE-0010933,UniProtKB/Swiss-Prot:P45532,Genbank:NP_417804.1,EcoGene:EG12898,GeneID:947852;Name=NP_417804.1;gbkey=CDS;gene=tusD;product=sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis;protein_id=NP_417804.1;transl_table=11 NC_000913.3 RefSeq gene 3475718 3476440 . - . ID=gene3408;Dbxref=EcoGene:EG12899,GeneID:947851;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;gene_synonym=ECK3333,JW5703;locus_tag=b3346 NC_000913.3 RefSeq CDS 3475718 3476440 . - 0 ID=cds3283;Parent=gene3408;Dbxref=ASAP:ABE-0010936,UniProtKB/Swiss-Prot:P64624,Genbank:NP_417805.4,EcoGene:EG12899,GeneID:947851;Name=NP_417805.4;gbkey=CDS;gene=yheO;product=putative PAS domain-containing DNA-binding transcriptional regulator;protein_id=NP_417805.4;transl_table=11 NC_000913.3 RefSeq gene 3476607 3477419 . - . ID=gene3409;Dbxref=EcoGene:EG12900,GeneID:947850;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;gene_synonym=ECK3334,JW3309,yzzS;locus_tag=b3347 NC_000913.3 RefSeq CDS 3476607 3477419 . - 0 ID=cds3284;Parent=gene3409;Dbxref=ASAP:ABE-0010938,UniProtKB/Swiss-Prot:P45523,Genbank:NP_417806.1,EcoGene:EG12900,GeneID:947850;Name=NP_417806.1;gbkey=CDS;gene=fkpA;product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase);protein_id=NP_417806.1;transl_table=11 NC_000913.3 RefSeq gene 3477640 3477858 . + . ID=gene3410;Dbxref=EcoGene:EG11664,GeneID:947849;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;gene_synonym=ECK3335,JW3310;locus_tag=b3348 NC_000913.3 RefSeq CDS 3477640 3477858 . + 0 ID=cds3285;Parent=gene3410;Dbxref=ASAP:ABE-0010944,UniProtKB/Swiss-Prot:P0A8R4,Genbank:NP_417807.1,EcoGene:EG11664,GeneID:947849;Name=NP_417807.1;Note=host factor for lysis of phiX174 infection;gbkey=CDS;gene=slyX;product=phi X174 lysis protein;protein_id=NP_417807.1;transl_table=11 NC_000913.3 RefSeq gene 3477907 3478497 . - . ID=gene3411;Dbxref=EcoGene:EG11663,GeneID:947859;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;gene_synonym=ECK3336,JW3311;locus_tag=b3349 NC_000913.3 RefSeq CDS 3477907 3478497 . - 0 ID=cds3286;Parent=gene3411;Dbxref=ASAP:ABE-0010946,UniProtKB/Swiss-Prot:P0A9K9,Genbank:NP_417808.1,EcoGene:EG11663,GeneID:947859;Name=NP_417808.1;Note=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase);gbkey=CDS;gene=slyD;product=FKBP-type peptidyl prolyl cis-trans isomerase (rotamase);protein_id=NP_417808.1;transl_table=11 NC_000913.3 RefSeq gene 3478592 3478792 . - . ID=gene3412;Dbxref=EcoGene:EG14364,GeneID:1450290;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;gene_synonym=ECK3337,JW3312;locus_tag=b4551 NC_000913.3 RefSeq CDS 3478592 3478792 . - 0 ID=cds3287;Parent=gene3412;Dbxref=ASAP:ABE-0285072,UniProtKB/Swiss-Prot:P0ADW8,Genbank:YP_588468.1,EcoGene:EG14364,GeneID:1450290;Name=YP_588468.1;gbkey=CDS;gene=yheV;product=DUF2387 family putative metal-binding protein;protein_id=YP_588468.1;transl_table=11 NC_000913.3 RefSeq gene 3478802 3480607 . - . ID=gene3413;Dbxref=EcoGene:EG20110,GeneID:947858;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;gene_synonym=ECK3338,JW3313,trkB;locus_tag=b3350 NC_000913.3 RefSeq CDS 3478802 3480607 . - 0 ID=cds3288;Parent=gene3413;Dbxref=ASAP:ABE-0010949,UniProtKB/Swiss-Prot:P45522,Genbank:NP_417809.1,EcoGene:EG20110,GeneID:947858;Name=NP_417809.1;Note=K+ efflux%3B NEM-activable K+/H+ antiporter;gbkey=CDS;gene=kefB;product=potassium:proton antiporter;protein_id=NP_417809.1;transl_table=11 NC_000913.3 RefSeq gene 3480607 3481161 . - . ID=gene3414;Dbxref=EcoGene:EG12902,GeneID:947857;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;gene_synonym=ECK3339,JW3314,yheR;locus_tag=b3351 NC_000913.3 RefSeq CDS 3480607 3481161 . - 0 ID=cds3289;Parent=gene3414;Dbxref=ASAP:ABE-0010951,UniProtKB/Swiss-Prot:P0A756,Genbank:NP_417810.1,EcoGene:EG12902,GeneID:947857;Name=NP_417810.1;Note=putative NAD(P)H oxidoreductase;gbkey=CDS;gene=kefG;product=potassium-efflux system ancillary protein for KefB%2C glutathione-regulated;protein_id=NP_417810.1;transl_table=11 NC_000913.3 RefSeq gene 3481289 3483202 . + . ID=gene3415;Dbxref=EcoGene:EG12903,GeneID:947856;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;gene_synonym=ECK3340,JW3315;locus_tag=b3352 NC_000913.3 RefSeq CDS 3481289 3483202 . + 0 ID=cds3290;Parent=gene3415;Dbxref=ASAP:ABE-0010955,UniProtKB/Swiss-Prot:P63389,Genbank:NP_417811.1,EcoGene:EG12903,GeneID:947856;Name=NP_417811.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=yheS;product=ABC-F family protein predicted regulatory ATPase;protein_id=NP_417811.1;transl_table=11 NC_000913.3 RefSeq gene 3483202 3484224 . + . ID=gene3416;Dbxref=EcoGene:EG12904,GeneID:947855;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;gene_synonym=ECK3341,JW3316;locus_tag=b3353 NC_000913.3 RefSeq CDS 3483202 3484224 . + 0 ID=cds3291;Parent=gene3416;Dbxref=ASAP:ABE-0010957,UniProtKB/Swiss-Prot:P45524,Genbank:NP_417812.1,EcoGene:EG12904,GeneID:947855;Name=NP_417812.1;gbkey=CDS;gene=yheT;product=UPF0017 family putative hydrolase;protein_id=NP_417812.1;transl_table=11 NC_000913.3 RefSeq gene 3484218 3484436 . + . ID=gene3417;Dbxref=EcoGene:EG12905,GeneID:947863;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;gene_synonym=ECK3342,JW3317;locus_tag=b3354 NC_000913.3 RefSeq CDS 3484218 3484436 . + 0 ID=cds3292;Parent=gene3417;Dbxref=ASAP:ABE-0010959,UniProtKB/Swiss-Prot:P67624,Genbank:NP_417813.1,EcoGene:EG12905,GeneID:947863;Name=NP_417813.1;gbkey=CDS;gene=yheU;product=UPF0270 family protein;protein_id=NP_417813.1;transl_table=11 NC_000913.3 RefSeq gene 3484490 3485359 . + . ID=gene3418;Dbxref=EcoGene:EG12365,GeneID:947862;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;gene_synonym=ECK3343,JW3318,prk?,yhfF;locus_tag=b3355 NC_000913.3 RefSeq CDS 3484490 3485359 . + 0 ID=cds3293;Parent=gene3418;Dbxref=ASAP:ABE-0010962,UniProtKB/Swiss-Prot:P0AEX5,Genbank:NP_417814.1,EcoGene:EG12365,GeneID:947862;Name=NP_417814.1;Note=probable phosphoribulokinase;gbkey=CDS;gene=prkB;product=putative phosphoribulokinase;protein_id=NP_417814.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3485372 3485393 . + . ID=id420;Note=REP246 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3485414 3485818 . - . ID=gene3419;Dbxref=EcoGene:EG11182,GeneID:947860;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;gene_synonym=ECK3344,JW3319;locus_tag=b3356 NC_000913.3 RefSeq CDS 3485414 3485818 . - 0 ID=cds3294;Parent=gene3419;Dbxref=ASAP:ABE-0010964,UniProtKB/Swiss-Prot:P0ADX1,Genbank:NP_417815.1,EcoGene:EG11182,GeneID:947860;Name=NP_417815.1;gbkey=CDS;gene=yhfA;product=OsmC family protein;protein_id=NP_417815.1;transl_table=11 NC_000913.3 RefSeq gene 3486120 3486752 . + . ID=gene3420;Dbxref=EcoGene:EG10164,GeneID:947867;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;gene_synonym=cap,csm,ECK3345,JW5702;locus_tag=b3357 NC_000913.3 RefSeq CDS 3486120 3486752 . + 0 ID=cds3295;Parent=gene3420;Dbxref=ASAP:ABE-0010970,UniProtKB/Swiss-Prot:P0ACJ8,Genbank:NP_417816.1,EcoGene:EG10164,GeneID:947867;Name=NP_417816.1;Note=cyclic AMP receptor protein;gbkey=CDS;gene=crp;product=cAMP-activated global transcription factor%2C mediator of catabolite repression;protein_id=NP_417816.1;transl_table=11 NC_000913.3 RefSeq gene 3486791 3488893 . + . ID=gene3421;Dbxref=EcoGene:EG12906,GeneID:947866;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;gene_synonym=ECK3346,JW5701;locus_tag=b3358 NC_000913.3 RefSeq CDS 3486791 3488893 . + 0 ID=cds3296;Parent=gene3421;Dbxref=ASAP:ABE-0010974,UniProtKB/Swiss-Prot:P45537,Genbank:NP_417817.2,EcoGene:EG12906,GeneID:947866;Name=NP_417817.2;gbkey=CDS;gene=yhfK;product=putative transporter%2C FUSC superfamily inner membrane protein;protein_id=NP_417817.2;transl_table=11 NC_000913.3 RefSeq repeat_region 3488903 3488958 . + . ID=id421;Note=REP247 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3488960 3490180 . - . ID=gene3422;Dbxref=EcoGene:EG10066,GeneID:947864;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=alaB,Arg1,argG,dapC,dtu,ECK3347,JW3322;locus_tag=b3359 NC_000913.3 RefSeq CDS 3488960 3490180 . - 0 ID=cds3297;Parent=gene3422;Dbxref=ASAP:ABE-0010976,UniProtKB/Swiss-Prot:P18335,Genbank:NP_417818.1,EcoGene:EG10066,GeneID:947864;Name=NP_417818.1;Note=acetylornithine delta-aminotransferase;gbkey=CDS;gene=argD;product=bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase;protein_id=NP_417818.1;transl_table=11 NC_000913.3 RefSeq gene 3490266 3490829 . - . ID=gene3423;Dbxref=EcoGene:EG10682,GeneID:947873;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;gene_synonym=ECK3348,JW3323;locus_tag=b3360 NC_000913.3 RefSeq CDS 3490266 3490829 . - 0 ID=cds3298;Parent=gene3423;Dbxref=ASAP:ABE-0010983,UniProtKB/Swiss-Prot:P00903,Genbank:NP_417819.1,EcoGene:EG10682,GeneID:947873;Name=NP_417819.1;Note=p-aminobenzoate synthetase%2C component II;gbkey=CDS;gene=pabA;product=aminodeoxychorismate synthase%2C subunit II;protein_id=NP_417819.1;transl_table=11 NC_000913.3 RefSeq gene 3490861 3491463 . - . ID=gene3424;Dbxref=EcoGene:EG10307,GeneID:947872;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;gene_synonym=ECK3349,JW3324,vhpT;locus_tag=b3361 NC_000913.3 RefSeq CDS 3490861 3491463 . - 0 ID=cds3299;Parent=gene3424;Dbxref=ASAP:ABE-0010987,UniProtKB/Swiss-Prot:P20605,Genbank:NP_417820.1,EcoGene:EG10307,GeneID:947872;Name=NP_417820.1;Note=induced in stationary phase%2C recognized by rpoS%2C affects cell division;gbkey=CDS;gene=fic;product=stationary phase-induced protein%2C putative toxin;protein_id=NP_417820.1;transl_table=11 NC_000913.3 RefSeq gene 3491453 3491620 . - . ID=gene3425;Dbxref=EcoGene:EG12374,GeneID:947871;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;gene_synonym=ECK3350,JW3325,vhpA;locus_tag=b3362 NC_000913.3 RefSeq CDS 3491453 3491620 . - 0 ID=cds3300;Parent=gene3425;Dbxref=ASAP:ABE-0010989,UniProtKB/Swiss-Prot:P0ADX5,Genbank:NP_417821.1,EcoGene:EG12374,GeneID:947871;Name=NP_417821.1;gbkey=CDS;gene=yhfG;product=putative antitoxin for Fic;protein_id=NP_417821.1;transl_table=11 NC_000913.3 RefSeq gene 3491725 3492297 . - . ID=gene3426;Dbxref=EcoGene:EG10757,GeneID:947870;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=ECK3351,JW3326,rot,rotA;locus_tag=b3363 NC_000913.3 RefSeq CDS 3491725 3492297 . - 0 ID=cds3301;Parent=gene3426;Dbxref=ASAP:ABE-0010992,UniProtKB/Swiss-Prot:P0AFL3,Genbank:NP_417822.1,EcoGene:EG10757,GeneID:947870;Name=NP_417822.1;gbkey=CDS;gene=ppiA;product=peptidyl-prolyl cis-trans isomerase A (rotamase A);protein_id=NP_417822.1;transl_table=11 NC_000913.3 RefSeq gene 3492568 3493749 . + . ID=gene3427;Dbxref=EcoGene:EG11262,GeneID:947869;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;gene_synonym=ECK3352,gutS,JW3327,yhfC,yhfH;locus_tag=b3364 NC_000913.3 RefSeq CDS 3492568 3493749 . + 0 ID=cds3302;Parent=gene3427;Dbxref=ASAP:ABE-0010997,UniProtKB/Swiss-Prot:P60778,Genbank:NP_417823.1,EcoGene:EG11262,GeneID:947869;Name=NP_417823.1;Note=putative transport;gbkey=CDS;gene=tsgA;product=putative transporter;protein_id=NP_417823.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3493758 3493783 . + . ID=id422;Note=REP248 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3494011 3496554 . + . ID=gene3428;Dbxref=EcoGene:EG10653,GeneID:947868;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;gene_synonym=ECK3353,JW3328;locus_tag=b3365 NC_000913.3 RefSeq CDS 3494011 3496554 . + 0 ID=cds3303;Parent=gene3428;Dbxref=ASAP:ABE-0011003,UniProtKB/Swiss-Prot:P08201,Genbank:NP_417824.1,EcoGene:EG10653,GeneID:947868;Name=NP_417824.1;Note=nitrite reductase (NAD(P)H) subunit;gbkey=CDS;gene=nirB;product=nitrite reductase%2C large subunit%2C NAD(P)H-binding;protein_id=NP_417824.1;transl_table=11 NC_000913.3 RefSeq gene 3496551 3496877 . + . ID=gene3429;Dbxref=EcoGene:EG10655,GeneID:947881;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;gene_synonym=ECK3354,JW3329;locus_tag=b3366 NC_000913.3 RefSeq CDS 3496551 3496877 . + 0 ID=cds3304;Parent=gene3429;Dbxref=ASAP:ABE-0011005,UniProtKB/Swiss-Prot:P0A9I8,Genbank:NP_417825.1,EcoGene:EG10655,GeneID:947881;Name=NP_417825.1;Note=nitrite reductase (NAD(P)H) subunit;gbkey=CDS;gene=nirD;product=nitrite reductase (NADH) small subunit;protein_id=NP_417825.1;transl_table=11 NC_000913.3 RefSeq gene 3497003 3497809 . + . ID=gene3430;Dbxref=EcoGene:EG10654,GeneID:2847757;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;gene_synonym=ECK3355,JW3330;locus_tag=b3367 NC_000913.3 RefSeq CDS 3497003 3497809 . + 0 ID=cds3305;Parent=gene3430;Dbxref=ASAP:ABE-0011008,UniProtKB/Swiss-Prot:P0AC26,Genbank:YP_026212.2,EcoGene:EG10654,GeneID:2847757;Name=YP_026212.2;Note=nitrite reductase activity;gbkey=CDS;gene=nirC;product=nitrite transporter;protein_id=YP_026212.2;transl_table=11 NC_000913.3 RefSeq gene 3497828 3499201 . + . ID=gene3431;Dbxref=EcoGene:EG10188,GeneID:947880;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;gene_synonym=ECK3356,JW3331;locus_tag=b3368 NC_000913.3 RefSeq CDS 3497828 3499201 . + 0 ID=cds3306;Parent=gene3431;Dbxref=ASAP:ABE-0011010,UniProtKB/Swiss-Prot:P0AEA8,Genbank:NP_417827.1,EcoGene:EG10188,GeneID:947880;Name=NP_417827.1;Note=uroporphyrinogen III methylase%3B sirohaeme biosynthesis;gbkey=CDS;gene=cysG;product=fused siroheme synthase 1%2C3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase;protein_id=NP_417827.1;transl_table=11 NC_000913.3 RefSeq gene 3499448 3499615 . + . ID=gene3432;Dbxref=EcoGene:EG12907,GeneID:947879;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;gene_synonym=ECK3357,JW3332;locus_tag=b3369 NC_000913.3 RefSeq CDS 3499448 3499615 . + 0 ID=cds3307;Parent=gene3432;Dbxref=ASAP:ABE-0011016,UniProtKB/Swiss-Prot:P64627,Genbank:NP_417828.1,EcoGene:EG12907,GeneID:947879;Name=NP_417828.1;gbkey=CDS;gene=yhfL;product=small lipoprotein;protein_id=NP_417828.1;transl_table=11 NC_000913.3 RefSeq gene 3499910 3501247 . + . ID=gene3433;Dbxref=EcoGene:EG12908,GeneID:947878;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;gene_synonym=ECK3358,JW3333,yhfM;locus_tag=b3370 NC_000913.3 RefSeq CDS 3499910 3501247 . + 0 ID=cds3308;Parent=gene3433;Dbxref=ASAP:ABE-0011019,UniProtKB/Swiss-Prot:P45539,Genbank:NP_417829.2,EcoGene:EG12908,GeneID:947878;Name=NP_417829.2;Note=putative amino acid/amine transport protein;gbkey=CDS;gene=frlA;product=putative fructoselysine transporter;protein_id=NP_417829.2;transl_table=11 NC_000913.3 RefSeq gene 3501268 3502290 . + . ID=gene3434;Dbxref=EcoGene:EG12909,GeneID:947875;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;gene_synonym=ECK3359,JW5700,yhfN;locus_tag=b3371 NC_000913.3 RefSeq CDS 3501268 3502290 . + 0 ID=cds3309;Parent=gene3434;Dbxref=ASAP:ABE-0011021,UniProtKB/Swiss-Prot:P0AC00,Genbank:NP_417830.4,EcoGene:EG12909,GeneID:947875;Name=NP_417830.4;Note=putative transport protein;gbkey=CDS;gene=frlB;product=fructoselysine-6-P-deglycase;protein_id=NP_417830.4;transl_table=11 NC_000913.3 RefSeq gene 3502340 3503170 . + . ID=gene3435;Dbxref=EcoGene:EG12910,GeneID:2847758;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;gene_synonym=ECK3360,JW5699,yhfO,yhfP;locus_tag=b4474 NC_000913.3 RefSeq CDS 3502340 3503170 . + 0 ID=cds3310;Parent=gene3435;Dbxref=ASAP:ABE-0174114,UniProtKB/Swiss-Prot:P45541,Genbank:YP_026213.1,EcoGene:EG12910,GeneID:2847758;Name=YP_026213.1;Note=putative fructoselysine or fructoselysine 6-P isomerase;gbkey=CDS;gene=frlC;product=fructoselysine 3-epimerase;protein_id=YP_026213.1;transl_table=11 NC_000913.3 RefSeq gene 3503167 3503952 . + . ID=gene3436;Dbxref=EcoGene:EG12912,GeneID:947886;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;gene_synonym=ECK3361,JW3337,yhfQ;locus_tag=b3374 NC_000913.3 RefSeq CDS 3503167 3503952 . + 0 ID=cds3311;Parent=gene3436;Dbxref=ASAP:ABE-0011029,UniProtKB/Swiss-Prot:P45543,Genbank:NP_417833.1,EcoGene:EG12912,GeneID:947886;Name=NP_417833.1;Note=putative kinase;gbkey=CDS;gene=frlD;product=fructoselysine 6-kinase;protein_id=NP_417833.1;transl_table=11 NC_000913.3 RefSeq gene 3504052 3504783 . + . ID=gene3437;Dbxref=EcoGene:EG12913,GeneID:947885;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=ECK3362,JW5698,yhfR;locus_tag=b3375 NC_000913.3 RefSeq CDS 3504052 3504783 . + 0 ID=cds3312;Parent=gene3437;Dbxref=ASAP:ABE-0011031,UniProtKB/Swiss-Prot:P45544,Genbank:NP_417834.6,EcoGene:EG12913,GeneID:947885;Name=NP_417834.6;Note=putative transcriptional regulator;gbkey=CDS;gene=frlR;product=putative DNA-binding transcriptional regulator;protein_id=NP_417834.6;transl_table=11 NC_000913.3 RefSeq repeat_region 3504786 3504821 . + . ID=id423;Note=REP249 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3504935 3506020 . - . ID=gene3438;Dbxref=EcoGene:EG12914,GeneID:947884;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;gene_synonym=ECK3363,JW3339;locus_tag=b3376 NC_000913.3 RefSeq CDS 3504935 3506020 . - 0 ID=cds3313;Parent=gene3438;Dbxref=ASAP:ABE-0011035,UniProtKB/Swiss-Prot:P45545,Genbank:NP_417835.1,EcoGene:EG12914,GeneID:947884;Name=NP_417835.1;gbkey=CDS;gene=yhfS;product=FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein;protein_id=NP_417835.1;transl_table=11 NC_000913.3 RefSeq gene 3506032 3507336 . - . ID=gene3439;Dbxref=EcoGene:EG12915,GeneID:947883;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;gene_synonym=ECK3364,JW3340;locus_tag=b3377 NC_000913.3 RefSeq CDS 3506032 3507336 . - 0 ID=cds3314;Parent=gene3439;Dbxref=ASAP:ABE-0011037,UniProtKB/Swiss-Prot:P45546,Genbank:NP_417836.1,EcoGene:EG12915,GeneID:947883;Name=NP_417836.1;Note=putative transport system permease protein;gbkey=CDS;gene=yhfT;product=inner membrane protein;protein_id=NP_417836.1;transl_table=11 NC_000913.3 RefSeq gene 3507348 3507701 . - . ID=gene3440;Dbxref=EcoGene:EG12916,GeneID:947892;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;gene_synonym=ECK3365,JW5697;locus_tag=b3378 NC_000913.3 RefSeq CDS 3507348 3507701 . - 0 ID=cds3315;Parent=gene3440;Dbxref=ASAP:ABE-0011041,UniProtKB/Swiss-Prot:P64631,Genbank:NP_417837.2,EcoGene:EG12916,GeneID:947892;Name=NP_417837.2;gbkey=CDS;gene=yhfU;product=DUF2620 family protein;protein_id=NP_417837.2;transl_table=11 NC_000913.3 RefSeq gene 3507712 3508590 . - . ID=gene3441;Dbxref=EcoGene:EG12917,GeneID:947891;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;gene_synonym=ECK3366,JW3342,yhfV;locus_tag=b3379 NC_000913.3 RefSeq CDS 3507712 3508590 . - 0 ID=cds3316;Parent=gene3441;Dbxref=ASAP:ABE-0011044,UniProtKB/Swiss-Prot:P45548,Genbank:NP_417838.1,EcoGene:EG12917,GeneID:947891;Name=NP_417838.1;Note=putative hydrolase;gbkey=CDS;gene=php;product=phosphotriesterase homology protein;protein_id=NP_417838.1;transl_table=11 NC_000913.3 RefSeq gene 3508587 3509813 . - . ID=gene3442;Dbxref=EcoGene:EG12918,GeneID:947890;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;gene_synonym=ECK3367,JW3343;locus_tag=b3380 NC_000913.3 RefSeq CDS 3508587 3509813 . - 0 ID=cds3317;Parent=gene3442;Dbxref=ASAP:ABE-0011046,UniProtKB/Swiss-Prot:P45549,Genbank:NP_417839.1,EcoGene:EG12918,GeneID:947890;Name=NP_417839.1;Note=putative mutase;gbkey=CDS;gene=yhfW;product=phosphopentomutase-related metalloenzyme superfamily protein;protein_id=NP_417839.1;transl_table=11 NC_000913.3 RefSeq gene 3509813 3510976 . - . ID=gene3443;Dbxref=EcoGene:EG12919,GeneID:947889;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;gene_synonym=ECK3368,JW3344;locus_tag=b3381 NC_000913.3 RefSeq CDS 3509813 3510976 . - 0 ID=cds3318;Parent=gene3443;Dbxref=ASAP:ABE-0011048,UniProtKB/Swiss-Prot:P45550,Genbank:NP_417840.1,EcoGene:EG12919,GeneID:947889;Name=NP_417840.1;gbkey=CDS;gene=yhfX;product=putative pyridoxal 5'-phosphate binding protein;protein_id=NP_417840.1;transl_table=11 NC_000913.3 RefSeq gene 3511060 3511422 . - . ID=gene3444;Dbxref=EcoGene:EG12920,GeneID:947888;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;gene_synonym=ECK3369,JW5696;locus_tag=b3382 NC_000913.3 RefSeq CDS 3511060 3511422 . - 0 ID=cds3319;Parent=gene3444;Dbxref=ASAP:ABE-0011050,UniProtKB/Swiss-Prot:P45551,Genbank:NP_417841.2,EcoGene:EG12920,GeneID:947888;Name=NP_417841.2;gbkey=CDS;gene=yhfY;product=PRD domain protein;protein_id=NP_417841.2;transl_table=11 NC_000913.3 RefSeq gene 3511439 3512344 . - . ID=gene3445;Dbxref=EcoGene:EG12921,GeneID:947897;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;gene_synonym=ECK3370,JW5948;locus_tag=b3383 NC_000913.3 RefSeq CDS 3511439 3512344 . - 0 ID=cds3320;Parent=gene3445;Dbxref=ASAP:ABE-0011052,UniProtKB/Swiss-Prot:P45552,Genbank:YP_026214.1,EcoGene:EG12921,GeneID:947897;Name=YP_026214.1;gbkey=CDS;gene=yhfZ;product=putative DNA-binding transcriptional regulator;protein_id=YP_026214.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3512511 3512600 . + . ID=id424;Note=REP250 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3512634 3513638 . - . ID=gene3446;Dbxref=EcoGene:EG11030,GeneID:947894;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;gene_synonym=ECK3371,JW3347;locus_tag=b3384 NC_000913.3 RefSeq CDS 3512634 3513638 . - 0 ID=cds3321;Parent=gene3446;Dbxref=ASAP:ABE-0011056,UniProtKB/Swiss-Prot:P00954,Genbank:NP_417843.1,EcoGene:EG11030,GeneID:947894;Name=NP_417843.1;Note=tryptophan tRNA synthetase;gbkey=CDS;gene=trpS;product=tryptophanyl-tRNA synthetase;protein_id=NP_417843.1;transl_table=11 NC_000913.3 RefSeq gene 3513631 3514389 . - . ID=gene3447;Dbxref=EcoGene:EG11871,GeneID:947895;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;gene_synonym=ECK3372,JW3348,yhfE;locus_tag=b3385 NC_000913.3 RefSeq CDS 3513631 3514389 . - 0 ID=cds3322;Parent=gene3447;Dbxref=ASAP:ABE-0011058,UniProtKB/Swiss-Prot:P32662,Genbank:NP_417844.1,EcoGene:EG11871,GeneID:947895;Name=NP_417844.1;gbkey=CDS;gene=gph;product=phosphoglycolate phosphatase;protein_id=NP_417844.1;transl_table=11 NC_000913.3 RefSeq gene 3514382 3515059 . - . ID=gene3448;Dbxref=EcoGene:EG11960,GeneID:947896;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;gene_synonym=dod,ECK3373,JW3349,yhfD;locus_tag=b3386 NC_000913.3 RefSeq CDS 3514382 3515059 . - 0 ID=cds3323;Parent=gene3448;Dbxref=ASAP:ABE-0011061,UniProtKB/Swiss-Prot:P0AG07,Genbank:NP_417845.1,EcoGene:EG11960,GeneID:947896;Name=NP_417845.1;gbkey=CDS;gene=rpe;product=D-ribulose-5-phosphate 3-epimerase;protein_id=NP_417845.1;transl_table=11 NC_000913.3 RefSeq gene 3515077 3515913 . - . ID=gene3449;Dbxref=EcoGene:EG10204,GeneID:947893;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;gene_synonym=ECK3374,JW3350;locus_tag=b3387 NC_000913.3 RefSeq CDS 3515077 3515913 . - 0 ID=cds3324;Parent=gene3449;Dbxref=ASAP:ABE-0011063,UniProtKB/Swiss-Prot:P0AEE8,Genbank:NP_417846.1,EcoGene:EG10204,GeneID:947893;Name=NP_417846.1;gbkey=CDS;gene=dam;product=DNA adenine methyltransferase;protein_id=NP_417846.1;transl_table=11 NC_000913.3 RefSeq gene 3516020 3517306 . - . ID=gene3450;Dbxref=EcoGene:EG11183,GeneID:947930;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;gene_synonym=ECK3375,JW3351,yhfB;locus_tag=b3388 NC_000913.3 RefSeq CDS 3516020 3517306 . - 0 ID=cds3325;Parent=gene3450;Dbxref=ASAP:ABE-0011065,UniProtKB/Swiss-Prot:P11557,Genbank:NP_417847.1,EcoGene:EG11183,GeneID:947930;Name=NP_417847.1;Note=putative membrane protein%3B interferes with cell division;gbkey=CDS;gene=damX;product=cell division protein that binds to the septal ring;protein_id=NP_417847.1;transl_table=11 NC_000913.3 RefSeq gene 3517398 3518486 . - . ID=gene3451;Dbxref=EcoGene:EG10074,GeneID:947927;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;gene_synonym=ECK3376,JW3352;locus_tag=b3389 NC_000913.3 RefSeq CDS 3517398 3518486 . - 0 ID=cds3326;Parent=gene3451;Dbxref=ASAP:ABE-0011067,UniProtKB/Swiss-Prot:P07639,Genbank:NP_417848.1,EcoGene:EG10074,GeneID:947927;Name=NP_417848.1;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=NP_417848.1;transl_table=11 NC_000913.3 RefSeq gene 3518543 3519064 . - . ID=gene3452;Dbxref=EcoGene:EG10081,GeneID:2847759;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;gene_synonym=ECK3377,JW5947;locus_tag=b3390 NC_000913.3 RefSeq CDS 3518543 3519064 . - 0 ID=cds3327;Parent=gene3452;Dbxref=ASAP:ABE-0011069,UniProtKB/Swiss-Prot:P0A6D7,Genbank:YP_026215.2,EcoGene:EG10081,GeneID:2847759;Name=YP_026215.2;gbkey=CDS;gene=aroK;product=shikimate kinase I;protein_id=YP_026215.2;transl_table=11 NC_000913.3 RefSeq gene 3519465 3520703 . - . ID=gene3453;Dbxref=EcoGene:EG12113,GeneID:947901;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;gene_synonym=ECK3378,hopQ,JW3354;locus_tag=b3391 NC_000913.3 RefSeq CDS 3519465 3520703 . - 0 ID=cds3328;Parent=gene3453;Dbxref=ASAP:ABE-0011071,UniProtKB/Swiss-Prot:P34749,Genbank:NP_417850.1,EcoGene:EG12113,GeneID:947901;Name=NP_417850.1;Note=putative transport portein;gbkey=CDS;gene=hofQ;product=DNA catabolic putative fimbrial transporter;protein_id=NP_417850.1;transl_table=11 NC_000913.3 RefSeq gene 3520615 3521019 . - . ID=gene3454;Dbxref=EcoGene:EG12922,GeneID:947900;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;gene_synonym=ECK3379,JW5694,yrfA;locus_tag=b3392 NC_000913.3 RefSeq CDS 3520615 3521019 . - 0 ID=cds3329;Parent=gene3454;Dbxref=ASAP:ABE-0011073,UniProtKB/Swiss-Prot:P45750,Genbank:NP_417851.4,EcoGene:EG12922,GeneID:947900;Name=NP_417851.4;gbkey=CDS;gene=hofP;product=DNA catabolic protein;protein_id=NP_417851.4;transl_table=11 NC_000913.3 RefSeq gene 3521009 3521449 . - . ID=gene3455;Dbxref=EcoGene:EG12923,GeneID:947899;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;gene_synonym=ECK3380,JW3356,yrfB;locus_tag=b3393 NC_000913.3 RefSeq CDS 3521009 3521449 . - 0 ID=cds3330;Parent=gene3455;Dbxref=ASAP:ABE-0011075,UniProtKB/Swiss-Prot:P45751,Genbank:NP_417852.1,EcoGene:EG12923,GeneID:947899;Name=NP_417852.1;gbkey=CDS;gene=hofO;product=DNA catabolic protein;protein_id=NP_417852.1;transl_table=11 NC_000913.3 RefSeq gene 3521433 3521972 . - . ID=gene3456;Dbxref=EcoGene:EG12924,GeneID:947898;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;gene_synonym=ECK3381,JW3357,yrfC;locus_tag=b3394 NC_000913.3 RefSeq CDS 3521433 3521972 . - 0 ID=cds3331;Parent=gene3456;Dbxref=ASAP:ABE-0011077,UniProtKB/Swiss-Prot:P64634,Genbank:NP_417853.1,EcoGene:EG12924,GeneID:947898;Name=NP_417853.1;gbkey=CDS;gene=hofN;product=DNA catabolic putative fimbrial assembly protein;protein_id=NP_417853.1;transl_table=11 NC_000913.3 RefSeq gene 3521972 3522751 . - . ID=gene3457;Dbxref=EcoGene:EG12925,GeneID:947908;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;gene_synonym=ECK3382,JW5693,yrfD;locus_tag=b3395 NC_000913.3 RefSeq CDS 3521972 3522751 . - 0 ID=cds3332;Parent=gene3457;Dbxref=ASAP:ABE-0011079,UniProtKB/Swiss-Prot:P45753,Genbank:NP_417854.4,EcoGene:EG12925,GeneID:947908;Name=NP_417854.4;gbkey=CDS;gene=hofM;product=DNA catabolic putative pilus assembly protein;protein_id=NP_417854.4;transl_table=11 NC_000913.3 RefSeq gene 3522871 3525423 . + . ID=gene3458;Dbxref=EcoGene:EG10748,GeneID:947907;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;gene_synonym=ECK3383,JW3359,ponA;locus_tag=b3396 NC_000913.3 RefSeq CDS 3522871 3525423 . + 0 ID=cds3333;Parent=gene3458;Dbxref=ASAP:ABE-0011082,UniProtKB/Swiss-Prot:P02918,Genbank:NP_417855.4,EcoGene:EG10748,GeneID:947907;Name=NP_417855.4;Note=peptidoglycan synthetase%3B penicillin-binding protein 1A;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1a%2C murein transglycosylase and transpeptidase;protein_id=NP_417855.4;transl_table=11 NC_000913.3 RefSeq repeat_region 3525478 3525575 . + . ID=id425;Note=RIP251 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3525589 3526149 . - . ID=gene3459;Dbxref=EcoGene:EG12926,GeneID:947906;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;gene_synonym=ECK3384,JW3360,yrfE;locus_tag=b3397 NC_000913.3 RefSeq CDS 3525589 3526149 . - 0 ID=cds3334;Parent=gene3459;Dbxref=ASAP:ABE-0011086,UniProtKB/Swiss-Prot:P45799,Genbank:NP_417856.1,EcoGene:EG12926,GeneID:947906;Name=NP_417856.1;gbkey=CDS;gene=nudE;product=adenosine nucleotide hydrolase%3B Ap3A/Ap2A/ADP-ribose/NADH hydrolase;protein_id=NP_417856.1;transl_table=11 NC_000913.3 RefSeq gene 3526469 3528604 . + . ID=gene3460;Dbxref=EcoGene:EG12927,GeneID:947905;Name=yrfF;gbkey=Gene;gene=yrfF;gene_biotype=protein_coding;gene_synonym=ECK3385,igaA,JW3361,mucM,umoB;locus_tag=b3398 NC_000913.3 RefSeq CDS 3526469 3528604 . + 0 ID=cds3335;Parent=gene3460;Dbxref=ASAP:ABE-0011090,UniProtKB/Swiss-Prot:P45800,Genbank:NP_417857.1,EcoGene:EG12927,GeneID:947905;Name=NP_417857.1;Note=putative dehydrogenase;gbkey=CDS;gene=yrfF;product=putative RcsCDB-response attenuator%2C inner membrane protein;protein_id=NP_417857.1;transl_table=11 NC_000913.3 RefSeq gene 3528669 3529337 . + . ID=gene3461;Dbxref=EcoGene:EG12928,GeneID:947904;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;gene_synonym=ECK3386,JW5865;locus_tag=b3399 NC_000913.3 RefSeq CDS 3528669 3529337 . + 0 ID=cds3336;Parent=gene3461;Dbxref=ASAP:ABE-0011092,UniProtKB/Swiss-Prot:P64636,Genbank:NP_417858.4,EcoGene:EG12928,GeneID:947904;Name=NP_417858.4;Note=putative phosphatase;gbkey=CDS;gene=yrfG;product=GMP/IMP nucleotidase;protein_id=NP_417858.4;transl_table=11 NC_000913.3 RefSeq gene 3529348 3529749 . + . ID=gene3462;Dbxref=EcoGene:EG12929,GeneID:947912;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;gene_synonym=ECK3387,JW3363,yrfH;locus_tag=b3400 NC_000913.3 RefSeq CDS 3529348 3529749 . + 0 ID=cds3337;Parent=gene3462;Dbxref=ASAP:ABE-0011094,UniProtKB/Swiss-Prot:P0ACG8,Genbank:NP_417859.1,EcoGene:EG12929,GeneID:947912;Name=NP_417859.1;gbkey=CDS;gene=hslR;product=ribosome-associated heat shock protein Hsp15;protein_id=NP_417859.1;transl_table=11 NC_000913.3 RefSeq gene 3529774 3530652 . + . ID=gene3463;Dbxref=EcoGene:EG12930,GeneID:947178;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;gene_synonym=ECK3388,JW5692,yrfI;locus_tag=b3401 NC_000913.3 RefSeq CDS 3529774 3530652 . + 0 ID=cds3338;Parent=gene3463;Dbxref=ASAP:ABE-0011096,UniProtKB/Swiss-Prot:P0A6Y5,Genbank:NP_417860.2,EcoGene:EG12930,GeneID:947178;Name=NP_417860.2;gbkey=CDS;gene=hslO;product=heat shock protein Hsp33;protein_id=NP_417860.2;transl_table=11 NC_000913.3 RefSeq gene 3530715 3532439 . - . ID=gene3464;Dbxref=EcoGene:EG12931,GeneID:947651;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;gene_synonym=ECK3389,JW3365;locus_tag=b3402 NC_000913.3 RefSeq CDS 3530715 3532439 . - 0 ID=cds3339;Parent=gene3464;Dbxref=ASAP:ABE-0011098,UniProtKB/Swiss-Prot:P45804,Genbank:NP_417861.1,EcoGene:EG12931,GeneID:947651;Name=NP_417861.1;Note=putative transport;gbkey=CDS;gene=yhgE;product=DUF4153 family putative inner membrane protein;protein_id=NP_417861.1;transl_table=11 NC_000913.3 RefSeq gene 3532818 3534440 . + . ID=gene3465;Dbxref=EcoGene:EG10688,GeneID:945667;Name=pck;gbkey=Gene;gene=pck;gene_biotype=protein_coding;gene_synonym=ECK3390,JW3366,pckA;locus_tag=b3403 NC_000913.3 RefSeq CDS 3532818 3534440 . + 0 ID=cds3340;Parent=gene3465;Dbxref=ASAP:ABE-0011106,UniProtKB/Swiss-Prot:P22259,Genbank:NP_417862.1,EcoGene:EG10688,GeneID:945667;Name=NP_417862.1;gbkey=CDS;gene=pck;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=NP_417862.1;transl_table=11 NC_000913.3 RefSeq gene 3534516 3535868 . - . ID=gene3466;Dbxref=EcoGene:EG10269,GeneID:947272;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=cpr,ECK3391,JW3367,ompB,perA,tpo;locus_tag=b3404 NC_000913.3 RefSeq CDS 3534516 3535868 . - 0 ID=cds3341;Parent=gene3466;Dbxref=ASAP:ABE-0011108,UniProtKB/Swiss-Prot:P0AEJ4,Genbank:NP_417863.1,EcoGene:EG10269,GeneID:947272;Name=NP_417863.1;Note=protein histidine kinase/phosphatase sensor for OmpR%2C modulates expression of ompF and ompC;gbkey=CDS;gene=envZ;product=sensory histidine kinase in two-component regulatory system with OmpR;protein_id=NP_417863.1;transl_table=11 NC_000913.3 RefSeq gene 3535865 3536584 . - . ID=gene3467;Dbxref=EcoGene:EG10672,GeneID:947913;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;gene_synonym=ECK3392,JW3368,kmt,ompB;locus_tag=b3405 NC_000913.3 RefSeq CDS 3535865 3536584 . - 0 ID=cds3342;Parent=gene3467;Dbxref=ASAP:ABE-0011110,UniProtKB/Swiss-Prot:P0AA16,Genbank:NP_417864.1,EcoGene:EG10672,GeneID:947913;Name=NP_417864.1;Note=response regulator (sensor%2C EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis;gbkey=CDS;gene=ompR;product=response regulator in two-component regulatory system with EnvZ;protein_id=NP_417864.1;transl_table=11 NC_000913.3 RefSeq gene 3536812 3537288 . + . ID=gene3468;Dbxref=EcoGene:EG11578,GeneID:2847706;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;gene_synonym=ECK3393,JW3369;locus_tag=b3406 NC_000913.3 RefSeq CDS 3536812 3537288 . + 0 ID=cds3343;Parent=gene3468;Dbxref=ASAP:ABE-0011117,UniProtKB/Swiss-Prot:P30128,Genbank:YP_026216.2,EcoGene:EG11578,GeneID:2847706;Name=YP_026216.2;Note=transcription elongation factor and transcript cleavage;gbkey=CDS;gene=greB;product=transcript cleavage factor;protein_id=YP_026216.2;transl_table=11 NC_000913.3 RefSeq gene 3537385 3539706 . + . ID=gene3469;Dbxref=EcoGene:EG12932,GeneID:947911;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;gene_synonym=ECK3394,JW3370,tex;locus_tag=b3407 NC_000913.3 RefSeq CDS 3537385 3539706 . + 0 ID=cds3344;Parent=gene3469;Dbxref=ASAP:ABE-0011120,UniProtKB/Swiss-Prot:P46837,Genbank:NP_417866.4,EcoGene:EG12932,GeneID:947911;Name=NP_417866.4;gbkey=CDS;gene=yhgF;product=putative transcriptional accessory protein;protein_id=NP_417866.4;transl_table=11 NC_000913.3 RefSeq repeat_region 3539746 3539779 . + . ID=id426;Note=REP252 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3540163 3540390 . + . ID=gene3470;Dbxref=EcoGene:EG12101,GeneID:947909;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;gene_synonym=ECK3395,JW3371;locus_tag=b3408 NC_000913.3 RefSeq CDS 3540163 3540390 . + 0 ID=cds3345;Parent=gene3470;Dbxref=ASAP:ABE-0011124,UniProtKB/Swiss-Prot:P0AEL3,Genbank:NP_417867.1,EcoGene:EG12101,GeneID:947909;Name=NP_417867.1;Note=ferrous iron transport protein A;gbkey=CDS;gene=feoA;product=ferrous iron transporter%2C protein A;protein_id=NP_417867.1;transl_table=11 NC_000913.3 RefSeq gene 3540407 3542728 . + . ID=gene3471;Dbxref=EcoGene:EG12102,GeneID:947919;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;gene_synonym=ECK3396,JW3372;locus_tag=b3409 NC_000913.3 RefSeq CDS 3540407 3542728 . + 0 ID=cds3346;Parent=gene3471;Dbxref=ASAP:ABE-0011126,UniProtKB/Swiss-Prot:P33650,Genbank:NP_417868.1,EcoGene:EG12102,GeneID:947919;Name=NP_417868.1;Note=ferrous iron transport protein B;gbkey=CDS;gene=feoB;product=ferrous iron transporter protein B and GTP-binding protein%3B membrane protein;protein_id=NP_417868.1;transl_table=11 NC_000913.3 RefSeq gene 3542728 3542964 . + . ID=gene3472;Dbxref=EcoGene:EG12933,GeneID:947918;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;gene_synonym=ECK3397,JW3373,yhgG;locus_tag=b3410 NC_000913.3 RefSeq CDS 3542728 3542964 . + 0 ID=cds3347;Parent=gene3472;Dbxref=ASAP:ABE-0011130,UniProtKB/Swiss-Prot:P64638,Genbank:NP_417869.1,EcoGene:EG12933,GeneID:947918;Name=NP_417869.1;gbkey=CDS;gene=feoC;product=putative DNA-binding transcriptional regulator;protein_id=NP_417869.1;transl_table=11 NC_000913.3 RefSeq gene 3543167 3544045 . + . ID=gene3473;Dbxref=EcoGene:EG11750,GeneID:947917;Name=yhgA;gbkey=Gene;gene=yhgA;gene_biotype=protein_coding;gene_synonym=ECK3398,JW3374;locus_tag=b3411 NC_000913.3 RefSeq CDS 3543167 3544045 . + 0 ID=cds3348;Parent=gene3473;Dbxref=ASAP:ABE-0011134,UniProtKB/Swiss-Prot:P31667,Genbank:NP_417870.1,EcoGene:EG11750,GeneID:947917;Name=NP_417870.1;gbkey=CDS;gene=yhgA;product=transposase_31 family protein;protein_id=NP_417870.1;transl_table=11 NC_000913.3 RefSeq gene 3544074 3544844 . - . ID=gene3474;Dbxref=EcoGene:EG10122,GeneID:947916;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;gene_synonym=bioB,ECK3399,JW3375;locus_tag=b3412 NC_000913.3 RefSeq CDS 3544074 3544844 . - 0 ID=cds3349;Parent=gene3474;Dbxref=ASAP:ABE-0011136,UniProtKB/Swiss-Prot:P13001,Genbank:NP_417871.1,EcoGene:EG10122,GeneID:947916;Name=NP_417871.1;Note=biotin biosynthesis%3B reaction prior to pimeloyl CoA;gbkey=CDS;gene=bioH;product=pimeloyl-ACP methyl ester carboxylesterase;protein_id=NP_417871.1;transl_table=11 NC_000913.3 RefSeq gene 3544882 3545565 . + . ID=gene3475;Dbxref=EcoGene:EG12934,GeneID:947915;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;gene_synonym=ECK3400,JW5691,yhgH;locus_tag=b3413 NC_000913.3 RefSeq CDS 3544882 3545565 . + 0 ID=cds3350;Parent=gene3475;Dbxref=ASAP:ABE-0011139,UniProtKB/Swiss-Prot:P46846,Genbank:NP_417872.2,EcoGene:EG12934,GeneID:947915;Name=NP_417872.2;gbkey=CDS;gene=gntX;product=DNA catabolic protein;protein_id=NP_417872.2;transl_table=11 NC_000913.3 RefSeq gene 3545624 3546199 . + . ID=gene3476;Dbxref=EcoGene:EG12935,GeneID:947925;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;gene_synonym=ECK3401,gntY,JW3377,yhgI;locus_tag=b3414 NC_000913.3 RefSeq CDS 3545624 3546199 . + 0 ID=cds3351;Parent=gene3476;Dbxref=ASAP:ABE-0011144,UniProtKB/Swiss-Prot:P63020,Genbank:NP_417873.1,EcoGene:EG12935,GeneID:947925;Name=NP_417873.1;gbkey=CDS;gene=nfuA;product=Fe/S biogenesis protein%2C putative scaffold/chaperone protein;protein_id=NP_417873.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3546222 3546257 . + . ID=id427;Note=REP253 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3546559 3547875 . + . ID=gene3477;Dbxref=EcoGene:EG12380,GeneID:947924;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;gene_synonym=ECK3402,gntM,gntTalpha,JW5690,usgA,yhgC;locus_tag=b3415 NC_000913.3 RefSeq CDS 3546559 3547875 . + 0 ID=cds3352;Parent=gene3477;Dbxref=ASAP:ABE-0011148,UniProtKB/Swiss-Prot:P39835,Genbank:YP_026217.1,EcoGene:EG12380,GeneID:947924;Name=YP_026217.1;Note=high-affinity transport of gluconate / gluconate permease;gbkey=CDS;gene=gntT;product=gluconate transporter%2C high-affinity GNT I system;protein_id=YP_026217.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3547887 3547973 . + . ID=id428;Note=REP254 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3547986 3550070 . - . ID=gene3478;Dbxref=EcoGene:EG10561,GeneID:947923;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;gene_synonym=ECK3403,JW3379,malA;locus_tag=b3416 NC_000913.3 RefSeq CDS 3547986 3550070 . - 0 ID=cds3353;Parent=gene3478;Dbxref=ASAP:ABE-0011151,UniProtKB/Swiss-Prot:P15977,Genbank:NP_417875.1,EcoGene:EG10561,GeneID:947923;Name=NP_417875.1;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase (amylomaltase);protein_id=NP_417875.1;transl_table=11 NC_000913.3 RefSeq gene 3550080 3552473 . - . ID=gene3479;Dbxref=EcoGene:EG10560,GeneID:947922;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;gene_synonym=blu,ECK3404,JW5689,malA;locus_tag=b3417 NC_000913.3 RefSeq CDS 3550080 3552473 . - 0 ID=cds3354;Parent=gene3479;Dbxref=ASAP:ABE-0011154,UniProtKB/Swiss-Prot:P00490,Genbank:YP_026218.1,EcoGene:EG10560,GeneID:947922;Name=YP_026218.1;gbkey=CDS;gene=malP;product=maltodextrin phosphorylase;protein_id=YP_026218.1;transl_table=11 NC_000913.3 RefSeq gene 3553085 3555790 . + . ID=gene3480;Dbxref=EcoGene:EG10562,GeneID:947921;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;gene_synonym=ECK3405,JW3381,malA;locus_tag=b3418 NC_000913.3 RefSeq CDS 3553085 3555790 . + 0 ID=cds3355;Parent=gene3480;Dbxref=ASAP:ABE-0011162,UniProtKB/Swiss-Prot:P06993,Genbank:NP_417877.1,EcoGene:EG10562,GeneID:947921;Name=NP_417877.1;Note=positive regulator of mal regulon;gbkey=CDS;gene=malT;product=mal regulon transcriptional activator;protein_id=NP_417877.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3555796 3555819 . + . ID=id429;Note=REP255 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3555833 3556849 . - . ID=gene3481;Dbxref=EcoGene:EG12938,GeneID:2847707;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;gene_synonym=ECK3406,JW5688,yhgJ,yhgK;locus_tag=b4475 NC_000913.3 RefSeq CDS 3555833 3556849 . - 0 ID=cds3356;Parent=gene3481;Dbxref=ASAP:ABE-0174104,UniProtKB/Swiss-Prot:P46849,Genbank:YP_026219.1,EcoGene:EG12938,GeneID:2847707;Name=YP_026219.1;gbkey=CDS;gene=rtcA;product=RNA 3'-terminal phosphate cyclase;protein_id=YP_026219.1;transl_table=11 NC_000913.3 RefSeq gene 3556853 3558079 . - . ID=gene3482;Dbxref=EcoGene:EG12939,GeneID:947929;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;gene_synonym=ECK3407,JW3384,yhgL;locus_tag=b3421 NC_000913.3 RefSeq CDS 3556853 3558079 . - 0 ID=cds3357;Parent=gene3482;Dbxref=ASAP:ABE-0011170,UniProtKB/Swiss-Prot:P46850,Genbank:NP_417879.1,EcoGene:EG12939,GeneID:947929;Name=NP_417879.1;gbkey=CDS;gene=rtcB;product=RNA-splicing ligase;protein_id=NP_417879.1;transl_table=11 NC_000913.3 RefSeq gene 3558268 3559866 . + . ID=gene3483;Dbxref=EcoGene:EG12356,GeneID:947928;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;gene_synonym=ECK3408,JW3385,yhgB;locus_tag=b3422 NC_000913.3 RefSeq CDS 3558268 3559866 . + 0 ID=cds3358;Parent=gene3483;Dbxref=ASAP:ABE-0011174,UniProtKB/Swiss-Prot:P38035,Genbank:NP_417880.1,EcoGene:EG12356,GeneID:947928;Name=NP_417880.1;Note=sigma54-dependent regulator of rtcBA expression;gbkey=CDS;gene=rtcR;product=sigma 54-dependent transcriptional regulator of rtcBA expression;protein_id=NP_417880.1;transl_table=11 NC_000913.3 RefSeq gene 3559848 3560605 . - . ID=gene3484;Dbxref=EcoGene:EG10400,GeneID:947926;Name=glpR;gbkey=Gene;gene=glpR;gene_biotype=pseudogene;gene_synonym=ECK3409,JW3386;locus_tag=b3423;pseudo=true NC_000913.3 RefSeq CDS 3560456 3560605 . - 0 ID=cds3359;Parent=gene3484;Dbxref=ASAP:ABE-0011176,UniProtKB/Swiss-Prot:P0ACL0,EcoGene:EG10400,GeneID:947926;Note=pseudogene%2C DNA-binding transcriptional repressor%3Bregulator%3B Energy metabolism%2C carbon: Anaerobic respiration~repressor of the glp operon;gbkey=CDS;gene=glpR;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3559848 3560453 . - 0 ID=cds3359;Parent=gene3484;Dbxref=ASAP:ABE-0011176,UniProtKB/Swiss-Prot:P0ACL0,EcoGene:EG10400,GeneID:947926;Note=pseudogene%2C DNA-binding transcriptional repressor%3Bregulator%3B Energy metabolism%2C carbon: Anaerobic respiration~repressor of the glp operon;gbkey=CDS;gene=glpR;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3560622 3561452 . - . ID=gene3485;Dbxref=EcoGene:EG10397,GeneID:947936;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;gene_synonym=ECK3410,JW5687;locus_tag=b3424 NC_000913.3 RefSeq CDS 3560622 3561452 . - 0 ID=cds3360;Parent=gene3485;Dbxref=ASAP:ABE-0011179,UniProtKB/Swiss-Prot:P09391,Genbank:YP_026220.1,EcoGene:EG10397,GeneID:947936;Name=YP_026220.1;Note=protein of glp regulon;gbkey=CDS;gene=glpG;product=rhomboid intramembrane serine protease;protein_id=YP_026220.1;transl_table=11 NC_000913.3 RefSeq gene 3561497 3561823 . - . ID=gene3486;Dbxref=EcoGene:EG10395,GeneID:947935;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;gene_synonym=ECK3411,JW3388;locus_tag=b3425 NC_000913.3 RefSeq CDS 3561497 3561823 . - 0 ID=cds3361;Parent=gene3486;Dbxref=ASAP:ABE-0011182,UniProtKB/Swiss-Prot:P0A6V5,Genbank:NP_417883.1,EcoGene:EG10395,GeneID:947935;Name=NP_417883.1;Note=rhodanese (thiosulfate:cyanide sulfertransferase);gbkey=CDS;gene=glpE;product=thiosulfate:cyanide sulfurtransferase (rhodanese);protein_id=NP_417883.1;transl_table=11 NC_000913.3 RefSeq gene 3562013 3563518 . + . ID=gene3487;Dbxref=EcoGene:EG10394,GeneID:947934;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;gene_synonym=ECK3412,glyD,JW3389;locus_tag=b3426 NC_000913.3 RefSeq CDS 3562013 3563518 . + 0 ID=cds3362;Parent=gene3487;Dbxref=ASAP:ABE-0011191,UniProtKB/Swiss-Prot:P13035,Genbank:NP_417884.1,EcoGene:EG10394,GeneID:947934;Name=NP_417884.1;Note=sn-glycerol-3-phosphate dehydrogenase (aerobic);gbkey=CDS;gene=glpD;product=sn-glycerol-3-phosphate dehydrogenase%2C aerobic%2C FAD/NAD(P)-binding;protein_id=NP_417884.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3563582 3563679 . + . ID=id430;Note=RIP256 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3563787 3564005 . - . ID=gene3488;Dbxref=EcoGene:EG14434,GeneID:947933;Name=yzgL;gbkey=Gene;gene=yzgL;gene_biotype=pseudogene;gene_synonym=ECK3413,JW3390;locus_tag=b3427;pseudo=true NC_000913.3 RefSeq CDS 3563787 3564005 . - 0 ID=cds3363;Parent=gene3488;Dbxref=ASAP:ABE-0011194,UniProtKB/Swiss-Prot:P76692,EcoGene:EG14434,GeneID:947933;Note=pseudogene%2C periplasmic solute binding protein homology;gbkey=CDS;gene=yzgL;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3564134 3566581 . - . ID=gene3489;Dbxref=EcoGene:EG10380,GeneID:947931;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;gene_synonym=ECK3414,glgY,JW3391;locus_tag=b3428 NC_000913.3 RefSeq CDS 3564134 3566581 . - 0 ID=cds3364;Parent=gene3489;Dbxref=ASAP:ABE-0011198,UniProtKB/Swiss-Prot:P0AC86,Genbank:NP_417886.1,EcoGene:EG10380,GeneID:947931;Name=NP_417886.1;gbkey=CDS;gene=glgP;product=glycogen phosphorylase;protein_id=NP_417886.1;transl_table=11 NC_000913.3 RefSeq gene 3566600 3568033 . - . ID=gene3490;Dbxref=EcoGene:EG10377,GeneID:947932;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;gene_synonym=ECK3415,JW3392;locus_tag=b3429 NC_000913.3 RefSeq CDS 3566600 3568033 . - 0 ID=cds3365;Parent=gene3490;Dbxref=ASAP:ABE-0011200,UniProtKB/Swiss-Prot:P0A6U8,Genbank:NP_417887.1,EcoGene:EG10377,GeneID:947932;Name=NP_417887.1;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=NP_417887.1;transl_table=11 NC_000913.3 RefSeq gene 3568033 3569328 . - . ID=gene3491;Dbxref=EcoGene:EG10379,GeneID:947942;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;gene_synonym=ECK3416,JW3393;locus_tag=b3430 NC_000913.3 RefSeq CDS 3568033 3569328 . - 0 ID=cds3366;Parent=gene3491;Dbxref=ASAP:ABE-0011204,UniProtKB/Swiss-Prot:P0A6V1,Genbank:NP_417888.1,EcoGene:EG10379,GeneID:947942;Name=NP_417888.1;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=NP_417888.1;transl_table=11 NC_000913.3 RefSeq gene 3569346 3571319 . - . ID=gene3492;Dbxref=EcoGene:EG10381,GeneID:947941;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;gene_synonym=ECK3417,JW3394;locus_tag=b3431 NC_000913.3 RefSeq CDS 3569346 3571319 . - 0 ID=cds3367;Parent=gene3492;Dbxref=ASAP:ABE-0011206,UniProtKB/Swiss-Prot:P15067,Genbank:NP_417889.1,EcoGene:EG10381,GeneID:947941;Name=NP_417889.1;Note=part of glycogen operon%2C a glycosyl hydrolase%2C debranching enzyme;gbkey=CDS;gene=glgX;product=glycogen debranching enzyme;protein_id=NP_417889.1;transl_table=11 NC_000913.3 RefSeq gene 3571316 3573502 . - . ID=gene3493;Dbxref=EcoGene:EG10378,GeneID:947940;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;gene_synonym=ECK3418,JW3395;locus_tag=b3432 NC_000913.3 RefSeq CDS 3571316 3573502 . - 0 ID=cds3368;Parent=gene3493;Dbxref=ASAP:ABE-0011209,UniProtKB/Swiss-Prot:P07762,Genbank:NP_417890.1,EcoGene:EG10378,GeneID:947940;Name=NP_417890.1;gbkey=CDS;gene=glgB;product=1%2C4-alpha-glucan branching enzyme;protein_id=NP_417890.1;transl_table=11 NC_000913.3 RefSeq gene 3573775 3574878 . - . ID=gene3494;Dbxref=EcoGene:EG10088,GeneID:947939;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;gene_synonym=dap,ECK3419,hom,JW3396;locus_tag=b3433 NC_000913.3 RefSeq CDS 3573775 3574878 . - 0 ID=cds3369;Parent=gene3494;Dbxref=ASAP:ABE-0011211,UniProtKB/Swiss-Prot:P0A9Q9,Genbank:NP_417891.1,EcoGene:EG10088,GeneID:947939;Name=NP_417891.1;Note=aspartate-semialdehyde dehydrogenase;gbkey=CDS;gene=asd;product=aspartate-semialdehyde dehydrogenase%2C NAD(P)-binding;protein_id=NP_417891.1;transl_table=11 NC_000913.3 RefSeq gene 3575071 3575664 . + . ID=gene3495;Dbxref=EcoGene:EG12941,GeneID:947938;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;gene_synonym=ECK3420,JW3397;locus_tag=b3434 NC_000913.3 RefSeq CDS 3575071 3575664 . + 0 ID=cds3370;Parent=gene3495;Dbxref=ASAP:ABE-0011216,UniProtKB/Swiss-Prot:P67143,Genbank:NP_417892.1,EcoGene:EG12941,GeneID:947938;Name=NP_417892.1;gbkey=CDS;gene=yhgN;product=UPF0056 family inner membrane protein;protein_id=NP_417892.1;transl_table=11 NC_000913.3 RefSeq gene 3575721 3577061 . - . ID=gene3496;Dbxref=EcoGene:EG12631,GeneID:2847760;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;gene_synonym=ECK3421,JW5686;locus_tag=b4476 NC_000913.3 RefSeq CDS 3575721 3577061 . - 0 ID=cds3371;Parent=gene3496;Dbxref=ASAP:ABE-0174105,UniProtKB/Swiss-Prot:P0AC96,Genbank:YP_026221.1,EcoGene:EG12631,GeneID:2847760;Name=YP_026221.1;Note=split gene%2C low-affinity gluconate transport permease protein in GNT I system;gbkey=CDS;gene=gntU;product=gluconate transporter%2C low affinity GNT 1 system;protein_id=YP_026221.1;transl_table=11 NC_000913.3 RefSeq gene 3577065 3577592 . - . ID=gene3497;Dbxref=EcoGene:EG12629,GeneID:947937;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;gene_synonym=ECK3422,JW3400;locus_tag=b3437 NC_000913.3 RefSeq CDS 3577065 3577592 . - 0 ID=cds3372;Parent=gene3497;Dbxref=ASAP:ABE-0011224,UniProtKB/Swiss-Prot:P46859,Genbank:NP_417894.2,EcoGene:EG12629,GeneID:947937;Name=NP_417894.2;Note=gluconokinase 2%2C thermoresistant%3B gluconate transport%2C GNT I system;gbkey=CDS;gene=gntK;product=gluconate kinase 2;protein_id=NP_417894.2;transl_table=11 NC_000913.3 RefSeq gene 3577731 3578726 . - . ID=gene3498;Dbxref=EcoGene:EG12630,GeneID:947946;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;gene_synonym=ECK3423,JW5946;locus_tag=b3438 NC_000913.3 RefSeq CDS 3577731 3578726 . - 0 ID=cds3373;Parent=gene3498;Dbxref=ASAP:ABE-0011226,UniProtKB/Swiss-Prot:P0ACP5,Genbank:YP_026222.1,EcoGene:EG12630,GeneID:947946;Name=YP_026222.1;Note=regulator of gluconate (gnt) operon;gbkey=CDS;gene=gntR;product=d-gluconate inducible gluconate regulon transcriptional repressor;protein_id=YP_026222.1;transl_table=11 NC_000913.3 RefSeq gene 3578950 3579645 . - . ID=gene3499;Dbxref=EcoGene:EG12943,GeneID:947945;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;gene_synonym=ECK3424,JW3402;locus_tag=b3439 NC_000913.3 RefSeq CDS 3578950 3579645 . - 0 ID=cds3374;Parent=gene3499;Dbxref=ASAP:ABE-0011228,UniProtKB/Swiss-Prot:P46852,Genbank:NP_417896.1,EcoGene:EG12943,GeneID:947945;Name=NP_417896.1;gbkey=CDS;gene=yhhW;product=quercetinase activity in vitro;protein_id=NP_417896.1;transl_table=11 NC_000913.3 RefSeq gene 3579768 3580805 . - . ID=gene3500;Dbxref=EcoGene:EG12944,GeneID:947944;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;gene_synonym=ECK3425,JW3403;locus_tag=b3440 NC_000913.3 RefSeq CDS 3579768 3580805 . - 0 ID=cds3375;Parent=gene3500;Dbxref=ASAP:ABE-0011232,UniProtKB/Swiss-Prot:P46853,Genbank:NP_417897.1,EcoGene:EG12944,GeneID:947944;Name=NP_417897.1;Note=putative regulator;gbkey=CDS;gene=yhhX;product=putative oxidoreductase;protein_id=NP_417897.1;transl_table=11 NC_000913.3 RefSeq gene 3580927 3581016 . - . ID=gene3501;Dbxref=EcoGene:EG31133,GeneID:2847761;Name=ryhB;gbkey=Gene;gene=ryhB;gene_biotype=antisense_RNA;gene_synonym=ECK3426,IS176,JWR0219,psrA18,sraI;locus_tag=b4451 NC_000913.3 RefSeq ncRNA 3580927 3581016 . - . ID=rna124;Parent=gene3501;Dbxref=ASAP:ABE-0047271,EcoGene:EG31133,GeneID:2847761;Note=Fur represses this inhibitory RNA%2C relieving acnA%2C fumA%2C sdhCDAB%2C bfr%2C ftnA%2C and sodB from RyhB-mediated repression%3B gvcB is regulated by gcvA and gcvR;gbkey=ncRNA;gene=ryhB;ncrna_class=antisense_RNA;product=sRNA antisense regulator mediating positive Fur regulon response%2C Hfq-dependent%3B global iron regulator NC_000913.3 RefSeq exon 3580927 3581016 . - . ID=id431;Parent=rna124;Dbxref=ASAP:ABE-0047271,EcoGene:EG31133,GeneID:2847761;Note=Fur represses this inhibitory RNA%2C relieving acnA%2C fumA%2C sdhCDAB%2C bfr%2C ftnA%2C and sodB from RyhB-mediated repression%3B gvcB is regulated by gcvA and gcvR;gbkey=ncRNA;gene=ryhB;ncrna_class=antisense_RNA;product=sRNA antisense regulator mediating positive Fur regulon response%2C Hfq-dependent%3B global iron regulator NC_000913.3 RefSeq gene 3581138 3581626 . + . ID=gene3502;Dbxref=EcoGene:EG12945,GeneID:947943;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;gene_synonym=ECK3427,JW3405;locus_tag=b3441 NC_000913.3 RefSeq CDS 3581138 3581626 . + 0 ID=cds3376;Parent=gene3502;Dbxref=ASAP:ABE-0011240,UniProtKB/Swiss-Prot:P46854,Genbank:NP_417898.1,EcoGene:EG12945,GeneID:947943;Name=NP_417898.1;gbkey=CDS;gene=yhhY;product=aminoacyl nucleotide detoxifying acetyltransferase;protein_id=NP_417898.1;transl_table=11 NC_000913.3 RefSeq gene 3581863 3583041 . + . ID=gene3503;Dbxref=EcoGene:EG12946,GeneID:947952;Name=yhhZ;gbkey=Gene;gene=yhhZ;gene_biotype=protein_coding;gene_synonym=ECK3428,JW3406;locus_tag=b3442 NC_000913.3 RefSeq CDS 3581863 3583041 . + 0 ID=cds3377;Parent=gene3503;Dbxref=ASAP:ABE-0011244,UniProtKB/Swiss-Prot:P46855,Genbank:NP_417899.1,EcoGene:EG12946,GeneID:947952;Name=NP_417899.1;gbkey=CDS;gene=yhhZ;product=putative Hcp1 family polymorphic toxin protein%3B putative colicin-like DNase/tRNase activity;protein_id=NP_417899.1;transl_table=11 NC_000913.3 RefSeq gene 3583038 3583418 . + . ID=gene3504;Dbxref=EcoGene:EG12947,GeneID:947951;Name=yrhA;gbkey=Gene;gene=yrhA;gene_biotype=pseudogene;gene_synonym=ECK3429,JW5864;locus_tag=b3443;part=1/2;pseudo=true NC_000913.3 RefSeq gene 3584196 3584309 . + . ID=gene3504;Dbxref=EcoGene:EG12947,GeneID:947951;Name=yrhA;gbkey=Gene;gene=yrhA;gene_biotype=pseudogene;gene_synonym=ECK3429,JW5864;locus_tag=b3443;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 3583038 3583418 . + 0 ID=cds3378;Parent=gene3504;Dbxref=ASAP:ABE-0011246,UniProtKB/Swiss-Prot:P46856,EcoGene:EG12947,GeneID:947951;Note=pseudogene%2C interrupted by IS1E;gbkey=CDS;gene=yrhA;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3584196 3584309 . + 0 ID=cds3378;Parent=gene3504;Dbxref=ASAP:ABE-0011246,UniProtKB/Swiss-Prot:P46856,EcoGene:EG12947,GeneID:947951;Note=pseudogene%2C interrupted by IS1E;gbkey=CDS;gene=yrhA;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 3583428 3584195 . + . ID=id432;gbkey=mobile_element NC_000913.3 RefSeq gene 3583483 3583758 . + . ID=gene3505;Dbxref=EcoGene:EG40001,GeneID:947950;Name=insA;Note=insA5;gbkey=Gene;gene=insA;gene_biotype=protein_coding;gene_synonym=ECK4556;locus_tag=b3444 NC_000913.3 RefSeq CDS 3583483 3583758 . + 0 ID=cds3379;Parent=gene3505;Dbxref=ASAP:ABE-0011249,UniProtKB/Swiss-Prot:P0CF11,Genbank:NP_417901.1,EcoGene:EG40001,GeneID:947950;Name=NP_417901.1;gbkey=CDS;gene=insA;product=IS1 repressor TnpA;protein_id=NP_417901.1;transl_table=11 NC_000913.3 RefSeq gene 3583677 3584180 . + . ID=gene3506;Dbxref=EcoGene:EG40002,GeneID:947949;Name=insB1;gbkey=Gene;gene=insB1;gene_biotype=protein_coding;gene_synonym=ECK0022;locus_tag=b3445 NC_000913.3 RefSeq CDS 3583677 3584180 . + 0 ID=cds3380;Parent=gene3506;Dbxref=ASAP:ABE-0011251,UniProtKB/Swiss-Prot:P0CF28,Genbank:NP_417902.1,EcoGene:EG40002,GeneID:947949;Name=NP_417902.1;gbkey=CDS;gene=insB1;product=IS1 transposase B;protein_id=NP_417902.1;transl_table=11 NC_000913.3 RefSeq gene 3584759 3585043 . + . ID=gene3507;Dbxref=EcoGene:EG12948,GeneID:947948;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;gene_synonym=ECK3430,JW3411;locus_tag=b3446 NC_000913.3 RefSeq CDS 3584759 3585043 . + 0 ID=cds3381;Parent=gene3507;Dbxref=ASAP:ABE-0011255,UniProtKB/Swiss-Prot:P46857,Genbank:NP_417903.1,EcoGene:EG12948,GeneID:947948;Name=NP_417903.1;gbkey=CDS;gene=yrhB;product=stable heat shock chaperone;protein_id=NP_417903.1;transl_table=11 NC_000913.3 RefSeq gene 3585081 3586823 . - . ID=gene3508;Dbxref=EcoGene:EG10374,GeneID:947947;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;gene_synonym=ECK3431,JW3412;locus_tag=b3447 NC_000913.3 RefSeq CDS 3585081 3586823 . - 0 ID=cds3382;Parent=gene3508;Dbxref=ASAP:ABE-0011257,UniProtKB/Swiss-Prot:P18956,Genbank:NP_417904.1,EcoGene:EG10374,GeneID:947947;Name=NP_417904.1;gbkey=CDS;gene=ggt;product=gamma-glutamyltranspeptidase;protein_id=NP_417904.1;transl_table=11 NC_000913.3 RefSeq gene 3586943 3587383 . + . ID=gene3509;Dbxref=EcoGene:EG11184,GeneID:947956;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;gene_synonym=ECK3432,JW3413;locus_tag=b3448 NC_000913.3 RefSeq CDS 3586943 3587383 . + 0 ID=cds3383;Parent=gene3509;Dbxref=ASAP:ABE-0011262,UniProtKB/Swiss-Prot:P0ADX7,Genbank:NP_417905.1,EcoGene:EG11184,GeneID:947956;Name=NP_417905.1;gbkey=CDS;gene=yhhA;product=DUF2756 family protein;protein_id=NP_417905.1;transl_table=11 NC_000913.3 RefSeq gene 3587370 3588113 . - . ID=gene3510;Dbxref=EcoGene:EG11050,GeneID:947955;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;gene_synonym=ECK3433,JW3414;locus_tag=b3449 NC_000913.3 RefSeq CDS 3587370 3588113 . - 0 ID=cds3384;Parent=gene3510;Dbxref=ASAP:ABE-0011264,UniProtKB/Swiss-Prot:P10908,Genbank:NP_417906.1,EcoGene:EG11050,GeneID:947955;Name=NP_417906.1;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase%2C cytosolic;protein_id=NP_417906.1;transl_table=11 NC_000913.3 RefSeq gene 3588110 3589180 . - . ID=gene3511;Dbxref=EcoGene:EG11048,GeneID:947953;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;gene_synonym=ECK3434,JW3415;locus_tag=b3450 NC_000913.3 RefSeq CDS 3588110 3589180 . - 0 ID=cds3385;Parent=gene3511;Dbxref=ASAP:ABE-0011266,UniProtKB/Swiss-Prot:P10907,Genbank:NP_417907.2,EcoGene:EG11048,GeneID:947953;Name=NP_417907.2;Note=ATP-binding component of sn-glycerol 3-phosphate transport system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate ABC transporter ATPase;protein_id=NP_417907.2;transl_table=11 NC_000913.3 RefSeq gene 3589182 3590027 . - . ID=gene3512;Dbxref=EcoGene:EG11049,GeneID:947959;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;gene_synonym=ECK3435,JW3416;locus_tag=b3451 NC_000913.3 RefSeq CDS 3589182 3590027 . - 0 ID=cds3386;Parent=gene3512;Dbxref=ASAP:ABE-0011270,UniProtKB/Swiss-Prot:P10906,Genbank:NP_417908.1,EcoGene:EG11049,GeneID:947959;Name=NP_417908.1;Note=sn-glycerol 3-phosphate transport system%2C integral membrane protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=ugpE;product=sn-glycerol-3-phosphate ABC transporter permease;protein_id=NP_417908.1;transl_table=11 NC_000913.3 RefSeq gene 3590024 3590911 . - . ID=gene3513;Dbxref=EcoGene:EG11046,GeneID:947957;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;gene_synonym=ECK3436,JW3417,psiB,psiC;locus_tag=b3452 NC_000913.3 RefSeq CDS 3590024 3590911 . - 0 ID=cds3387;Parent=gene3513;Dbxref=ASAP:ABE-0011272,UniProtKB/Swiss-Prot:P10905,Genbank:NP_417909.1,EcoGene:EG11046,GeneID:947957;Name=NP_417909.1;Note=sn-glycerol 3-phosphate transport system%2C integral membrane protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=ugpA;product=sn-glycerol-3-phosphate ABC transporter permease;protein_id=NP_417909.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3590933 3590998 . + . ID=id433;Note=REP257 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3591009 3592325 . - . ID=gene3514;Dbxref=EcoGene:EG11047,GeneID:947962;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;gene_synonym=ECK3437,JW3418,psiB,psiC;locus_tag=b3453 NC_000913.3 RefSeq CDS 3591009 3592325 . - 0 ID=cds3388;Parent=gene3514;Dbxref=ASAP:ABE-0011274,UniProtKB/Swiss-Prot:P0AG80,Genbank:NP_417910.1,EcoGene:EG11047,GeneID:947962;Name=NP_417910.1;Note=sn-glycerol 3-phosphate transport system%3B periplasmic binding protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=ugpB;product=sn-glycerol-3-phosphate ABC transporter periplasmic binding protein;protein_id=NP_417910.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3592564 3592662 . + . ID=id434;Note=RIP258 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3592724 3593437 . - . ID=gene3515;Dbxref=EcoGene:EG10536,GeneID:947961;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;gene_synonym=ECK3438,JW3419;locus_tag=b3454 NC_000913.3 RefSeq CDS 3592724 3593437 . - 0 ID=cds3389;Parent=gene3515;Dbxref=ASAP:ABE-0011282,UniProtKB/Swiss-Prot:P22731,Genbank:NP_417911.4,EcoGene:EG10536,GeneID:947961;Name=NP_417911.4;Note=ATP-binding component of leucine transport;gbkey=CDS;gene=livF;product=branched-chain amino acid ABC transporter ATPase;protein_id=NP_417911.4;transl_table=11 NC_000913.3 RefSeq gene 3593439 3594206 . - . ID=gene3516;Dbxref=EcoGene:EG10537,GeneID:947967;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;gene_synonym=ECK3439,hrbB,hrbC,hrbD,JW3420;locus_tag=b3455 NC_000913.3 RefSeq CDS 3593439 3594206 . - 0 ID=cds3390;Parent=gene3516;Dbxref=ASAP:ABE-0011284,UniProtKB/Swiss-Prot:P0A9S7,Genbank:NP_417912.1,EcoGene:EG10537,GeneID:947967;Name=NP_417912.1;Note=ATP-binding component of high-affinity branched-chain amino acid transport system;gbkey=CDS;gene=livG;product=branched-chain amino acid ABC transporter ATPase;protein_id=NP_417912.1;transl_table=11 NC_000913.3 RefSeq gene 3594203 3595480 . - . ID=gene3517;Dbxref=EcoGene:EG10541,GeneID:947966;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;gene_synonym=ECK3440,JW3421;locus_tag=b3456 NC_000913.3 RefSeq CDS 3594203 3595480 . - 0 ID=cds3391;Parent=gene3517;Dbxref=ASAP:ABE-0011287,UniProtKB/Swiss-Prot:P22729,Genbank:NP_417913.1,EcoGene:EG10541,GeneID:947966;Name=NP_417913.1;Note=high-affinity branched-chain amino acid transport%3B membrane component of ABC superfamily;gbkey=CDS;gene=livM;product=branched-chain amino acid ABC transporter permease;protein_id=NP_417913.1;transl_table=11 NC_000913.3 RefSeq gene 3595477 3596403 . - . ID=gene3518;Dbxref=EcoGene:EG10538,GeneID:947965;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;gene_synonym=ECK3441,hrbB,hrbC,hrbD,JW3422;locus_tag=b3457 NC_000913.3 RefSeq CDS 3595477 3596403 . - 0 ID=cds3392;Parent=gene3518;Dbxref=ASAP:ABE-0011290,UniProtKB/Swiss-Prot:P0AEX7,Genbank:NP_417914.1,EcoGene:EG10538,GeneID:947965;Name=NP_417914.1;Note=high-affinity branched-chain amino acid transport system%3B membrane component%3B membrane component of ABC superfamily;gbkey=CDS;gene=livH;product=branched-chain amino acid ABC transporter permease;protein_id=NP_417914.1;transl_table=11 NC_000913.3 RefSeq gene 3596451 3597560 . - . ID=gene3519;Dbxref=EcoGene:EG10540,GeneID:947964;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;gene_synonym=ECK3442,hrbB,hrbC,hrbD,JW3423;locus_tag=b3458 NC_000913.3 RefSeq CDS 3596451 3597560 . - 0 ID=cds3393;Parent=gene3519;Dbxref=ASAP:ABE-0011292,UniProtKB/Swiss-Prot:P04816,Genbank:NP_417915.1,EcoGene:EG10540,GeneID:947964;Name=NP_417915.1;Note=high-affinity leucine-specific transport system%3B periplasmic binding protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=livK;product=leucine transporter subunit;protein_id=NP_417915.1;transl_table=11 NC_000913.3 RefSeq gene 3597984 3598367 . + . ID=gene3520;Dbxref=EcoGene:EG12211,GeneID:947963;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;gene_synonym=ECK3443,JW3424,livL,panZ,yhhK;locus_tag=b3459 NC_000913.3 RefSeq CDS 3597984 3598367 . + 0 ID=cds3394;Parent=gene3520;Dbxref=ASAP:ABE-0011296,UniProtKB/Swiss-Prot:P37613,Genbank:NP_417916.1,EcoGene:EG12211,GeneID:947963;Name=NP_417916.1;gbkey=CDS;gene=panM;product=PanD autocleavage accelerator%2C panothenate synthesis;protein_id=NP_417916.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3598397 3598495 . + . ID=id435;Note=RIP259 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3598555 3599658 . - . ID=gene3521;Dbxref=EcoGene:EG10539,GeneID:947971;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;gene_synonym=ECK3444,hrbB,hrbC,hrbD,JW3425;locus_tag=b3460 NC_000913.3 RefSeq CDS 3598555 3599658 . - 0 ID=cds3395;Parent=gene3521;Dbxref=ASAP:ABE-0011299,UniProtKB/Swiss-Prot:P0AD96,Genbank:YP_026223.1,EcoGene:EG10539,GeneID:947971;Name=YP_026223.1;Note=high-affinity branched-chain amino acid transport protein (ABC superfamily%2C peri_bind)%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=livJ;product=branched-chain amino acid ABC transporter periplasmic binding protein;protein_id=YP_026223.1;transl_table=11 NC_000913.3 RefSeq gene 3599929 3600783 . - . ID=gene3522;Dbxref=EcoGene:EG10897,GeneID:947970;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;gene_synonym=ECK3445,fam,hin,htpR,JW3426;locus_tag=b3461 NC_000913.3 RefSeq CDS 3599929 3600783 . - 0 ID=cds3396;Parent=gene3522;Dbxref=ASAP:ABE-0011303,UniProtKB/Swiss-Prot:P0AGB3,Genbank:NP_417918.1,EcoGene:EG10897,GeneID:947970;Name=NP_417918.1;Note=RNA polymerase%2C sigma(32) factor%3B regulation of proteins induced at high temperatures;gbkey=CDS;gene=rpoH;product=RNA polymerase%2C sigma 32 (sigma H) factor;protein_id=NP_417918.1;transl_table=11 NC_000913.3 RefSeq gene 3601028 3602086 . - . ID=gene3523;Dbxref=EcoGene:EG10345,GeneID:947969;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;gene_synonym=ECK3446,ftsS,JW3427;locus_tag=b3462 NC_000913.3 RefSeq CDS 3601028 3602086 . - 0 ID=cds3397;Parent=gene3523;Dbxref=ASAP:ABE-0011311,UniProtKB/Swiss-Prot:P0AC30,Genbank:NP_417919.1,EcoGene:EG10345,GeneID:947969;Name=NP_417919.1;Note=cell division membrane protein;gbkey=CDS;gene=ftsX;product=putative ABC transporter permease;protein_id=NP_417919.1;transl_table=11 NC_000913.3 RefSeq gene 3602079 3602747 . - . ID=gene3524;Dbxref=EcoGene:EG10340,GeneID:947968;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;gene_synonym=ECK3447,JW3428;locus_tag=b3463 NC_000913.3 RefSeq CDS 3602079 3602747 . - 0 ID=cds3398;Parent=gene3524;Dbxref=ASAP:ABE-0011313,UniProtKB/Swiss-Prot:P0A9R7,Genbank:NP_417920.1,EcoGene:EG10340,GeneID:947968;Name=NP_417920.1;Note=ATP-binding component of a membrane-associated complex involved in cell division;gbkey=CDS;gene=ftsE;product=cell division ATP-binding protein;protein_id=NP_417920.1;transl_table=11 NC_000913.3 RefSeq gene 3602750 3604243 . - . ID=gene3525;Dbxref=EcoGene:EG10346,GeneID:947978;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;gene_synonym=ECK3448,JW3429;locus_tag=b3464 NC_000913.3 RefSeq CDS 3602750 3604243 . - 0 ID=cds3399;Parent=gene3525;Dbxref=ASAP:ABE-0011318,UniProtKB/Swiss-Prot:P10121,Genbank:NP_417921.1,EcoGene:EG10346,GeneID:947978;Name=NP_417921.1;Note=cell division membrane protein;gbkey=CDS;gene=ftsY;product=Signal Recognition Particle (SRP) receptor;protein_id=NP_417921.1;transl_table=11 NC_000913.3 RefSeq gene 3604393 3604989 . + . ID=gene3526;Dbxref=EcoGene:EG10343,GeneID:947977;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;gene_synonym=ECK3449,JW3430,yhhF;locus_tag=b3465 NC_000913.3 RefSeq CDS 3604393 3604989 . + 0 ID=cds3400;Parent=gene3526;Dbxref=ASAP:ABE-0011321,UniProtKB/Swiss-Prot:P0ADX9,Genbank:NP_417922.1,EcoGene:EG10343,GeneID:947977;Name=NP_417922.1;gbkey=CDS;gene=rsmD;product=16S rRNA m(2)G966 methyltransferase%2C SAM-dependent;protein_id=NP_417922.1;transl_table=11 NC_000913.3 RefSeq gene 3604979 3605248 . + . ID=gene3527;Dbxref=EcoGene:EG12212,GeneID:947976;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;gene_synonym=ECK3450,JW5683;locus_tag=b3466 NC_000913.3 RefSeq CDS 3604979 3605248 . + 0 ID=cds3401;Parent=gene3527;Dbxref=ASAP:ABE-0011323,UniProtKB/Swiss-Prot:P37614,Genbank:NP_417923.1,EcoGene:EG12212,GeneID:947976;Name=NP_417923.1;gbkey=CDS;gene=yhhL;product=DUF1145 family protein;protein_id=NP_417923.1;transl_table=11 NC_000913.3 RefSeq gene 3605251 3605610 . - . ID=gene3528;Dbxref=EcoGene:EG12213,GeneID:947975;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;gene_synonym=ECK3451,JW3432;locus_tag=b3467 NC_000913.3 RefSeq CDS 3605251 3605610 . - 0 ID=cds3402;Parent=gene3528;Dbxref=ASAP:ABE-0011325,UniProtKB/Swiss-Prot:P37615,Genbank:NP_417924.1,EcoGene:EG12213,GeneID:947975;Name=NP_417924.1;Note=putative receptor;gbkey=CDS;gene=yhhM;product=DUF2500 family protein;protein_id=NP_417924.1;transl_table=11 NC_000913.3 RefSeq gene 3605751 3606377 . + . ID=gene3529;Dbxref=EcoGene:EG12214,GeneID:947973;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;gene_synonym=ECK3452,JW3433;locus_tag=b3468 NC_000913.3 RefSeq CDS 3605751 3606377 . + 0 ID=cds3403;Parent=gene3529;Dbxref=ASAP:ABE-0011329,UniProtKB/Swiss-Prot:P0ADI9,Genbank:NP_417925.1,EcoGene:EG12214,GeneID:947973;Name=NP_417925.1;Note=putative enzyme;gbkey=CDS;gene=yhhN;product=TMEM86 family putative inner membrane protein;protein_id=NP_417925.1;transl_table=11 NC_000913.3 RefSeq gene 3606451 3608649 . + . ID=gene3530;Dbxref=EcoGene:EG12215,GeneID:947972;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;gene_synonym=ECK3453,JW3434,yhhO;locus_tag=b3469 NC_000913.3 RefSeq CDS 3606451 3608649 . + 0 ID=cds3404;Parent=gene3530;Dbxref=ASAP:ABE-0011332,UniProtKB/Swiss-Prot:P37617,Genbank:NP_417926.1,EcoGene:EG12215,GeneID:947972;Name=NP_417926.1;Note=zinc-transporting ATPase;gbkey=CDS;gene=zntA;product=zinc%2C cobalt and lead efflux system;protein_id=NP_417926.1;transl_table=11 NC_000913.3 RefSeq gene 3608751 3608996 . - . ID=gene3531;Dbxref=EcoGene:EG12216,GeneID:947974;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;gene_synonym=ECK3454,JW3435,sirA,yhhP;locus_tag=b3470 NC_000913.3 RefSeq CDS 3608751 3608996 . - 0 ID=cds3405;Parent=gene3531;Dbxref=ASAP:ABE-0011336,UniProtKB/Swiss-Prot:P0A890,Genbank:NP_417927.1,EcoGene:EG12216,GeneID:947974;Name=NP_417927.1;Note=small protein required for cell growth%3B affects RpoS stability~small ubiquitous RNA-binding protein required for normal growth%2C cytoplasmic;gbkey=CDS;gene=tusA;product=mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase;protein_id=NP_417927.1;transl_table=11 NC_000913.3 RefSeq gene 3609217 3609882 . + . ID=gene3532;Dbxref=EcoGene:EG12217,GeneID:947984;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;gene_synonym=ECK3455,JW3436;locus_tag=b3471 NC_000913.3 RefSeq CDS 3609217 3609882 . + 0 ID=cds3406;Parent=gene3532;Dbxref=ASAP:ABE-0011340,UniProtKB/Swiss-Prot:P37619,Genbank:NP_417928.1,EcoGene:EG12217,GeneID:947984;Name=NP_417928.1;gbkey=CDS;gene=yhhQ;product=DUF165 family inner membrane protein;protein_id=NP_417928.1;transl_table=11 NC_000913.3 RefSeq gene 3609955 3610512 . + . ID=gene3533;Dbxref=EcoGene:EG12218,GeneID:947983;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;gene_synonym=ECK3456,JW5682,yhhR;locus_tag=b3472 NC_000913.3 RefSeq CDS 3609955 3610512 . + 0 ID=cds3407;Parent=gene3533;Dbxref=ASAP:ABE-0011342,UniProtKB/Swiss-Prot:P0AEE1,Genbank:NP_417929.4,EcoGene:EG12218,GeneID:947983;Name=NP_417929.4;gbkey=CDS;gene=dcrB;product=putative lipoprotein;protein_id=NP_417929.4;transl_table=11 NC_000913.3 RefSeq gene 3610516 3611733 . - . ID=gene3534;Dbxref=EcoGene:EG12219,GeneID:947982;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;gene_synonym=ECK3457,JW5945;locus_tag=b3473 NC_000913.3 RefSeq CDS 3610516 3611733 . - 0 ID=cds3408;Parent=gene3534;Dbxref=ASAP:ABE-0011344,UniProtKB/Swiss-Prot:P37621,Genbank:NP_417930.2,EcoGene:EG12219,GeneID:947982;Name=NP_417930.2;Note=putative transport;gbkey=CDS;gene=yhhS;product=putative arabinose efflux transporter;protein_id=NP_417930.2;transl_table=11 NC_000913.3 RefSeq gene 3611865 3612914 . + . ID=gene3535;Dbxref=EcoGene:EG12220,GeneID:947980;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;gene_synonym=ECK3458,JW5680;locus_tag=b3474 NC_000913.3 RefSeq CDS 3611865 3612914 . + 0 ID=cds3409;Parent=gene3535;Dbxref=ASAP:ABE-0011347,UniProtKB/Swiss-Prot:P0AGM0,Genbank:NP_417931.4,EcoGene:EG12220,GeneID:947980;Name=NP_417931.4;gbkey=CDS;gene=yhhT;product=UPF0118 family putative transporter;protein_id=NP_417931.4;transl_table=11 NC_000913.3 RefSeq gene 3612969 3613556 . + . ID=gene3536;Dbxref=EcoGene:EG12221,GeneID:947979;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;gene_synonym=ECK3459,JW3440,yhhU;locus_tag=b3475 NC_000913.3 RefSeq CDS 3612969 3613556 . + 0 ID=cds3410;Parent=gene3536;Dbxref=ASAP:ABE-0011351,UniProtKB/Swiss-Prot:P37623,Genbank:NP_417932.1,EcoGene:EG12221,GeneID:947979;Name=NP_417932.1;gbkey=CDS;gene=acpT;product=4'-phosphopantetheinyl transferase;protein_id=NP_417932.1;transl_table=11 NC_000913.3 RefSeq gene 3613667 3615241 . + . ID=gene3537;Dbxref=EcoGene:EG12075,GeneID:947981;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;gene_synonym=ECK3460,hydC,hydD,JW3441;locus_tag=b3476 NC_000913.3 RefSeq CDS 3613667 3615241 . + 0 ID=cds3411;Parent=gene3537;Dbxref=ASAP:ABE-0011354,UniProtKB/Swiss-Prot:P33590,Genbank:NP_417933.1,EcoGene:EG12075,GeneID:947981;Name=NP_417933.1;Note=periplasmic binding protein for nickel%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=nikA;product=nickel/heme ABC transporter periplasmic binding protein;protein_id=NP_417933.1;transl_table=11 NC_000913.3 RefSeq gene 3615241 3616185 . + . ID=gene3538;Dbxref=EcoGene:EG12076,GeneID:947986;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;gene_synonym=ECK3461,hydC,hydD,JW3442;locus_tag=b3477 NC_000913.3 RefSeq CDS 3615241 3616185 . + 0 ID=cds3412;Parent=gene3538;Dbxref=ASAP:ABE-0011356,UniProtKB/Swiss-Prot:P33591,Genbank:NP_417934.1,EcoGene:EG12076,GeneID:947986;Name=NP_417934.1;Note=transport of nickel%2C membrane protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=nikB;product=nickel ABC transporter permease;protein_id=NP_417934.1;transl_table=11 NC_000913.3 RefSeq gene 3616182 3617015 . + . ID=gene3539;Dbxref=EcoGene:EG12077,GeneID:947990;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;gene_synonym=ECK3462,hydC,hydD,JW3443;locus_tag=b3478 NC_000913.3 RefSeq CDS 3616182 3617015 . + 0 ID=cds3413;Parent=gene3539;Dbxref=ASAP:ABE-0011358,UniProtKB/Swiss-Prot:P0AFA9,Genbank:NP_417935.1,EcoGene:EG12077,GeneID:947990;Name=NP_417935.1;Note=transport of nickel%2C membrane protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=nikC;product=nickel ABC transporter permease;protein_id=NP_417935.1;transl_table=11 NC_000913.3 RefSeq gene 3617015 3617779 . + . ID=gene3540;Dbxref=EcoGene:EG12078,GeneID:947989;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;gene_synonym=ECK3463,hydC,hydD,JW3444;locus_tag=b3479 NC_000913.3 RefSeq CDS 3617015 3617779 . + 0 ID=cds3414;Parent=gene3540;Dbxref=ASAP:ABE-0011360,UniProtKB/Swiss-Prot:P33593,Genbank:NP_417936.1,EcoGene:EG12078,GeneID:947989;Name=NP_417936.1;Note=ATP-binding protein of nickel transport system%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=nikD;product=nickel ABC transporter ATPase;protein_id=NP_417936.1;transl_table=11 NC_000913.3 RefSeq gene 3617776 3618582 . + . ID=gene3541;Dbxref=EcoGene:EG12079,GeneID:947987;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;gene_synonym=ECK3464,hydC,hydD,JW3445;locus_tag=b3480 NC_000913.3 RefSeq CDS 3617776 3618582 . + 0 ID=cds3415;Parent=gene3541;Dbxref=ASAP:ABE-0011362,UniProtKB/Swiss-Prot:P33594,Genbank:NP_417937.1,EcoGene:EG12079,GeneID:947987;Name=NP_417937.1;Note=ATP-binding protein of nickel transport system%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=nikE;product=nickel ABC transporter ATPase;protein_id=NP_417937.1;transl_table=11 NC_000913.3 RefSeq gene 3618588 3618989 . + . ID=gene3542;Dbxref=EcoGene:EG11519,GeneID:947995;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;gene_synonym=ECK3465,JW3446,yhhG;locus_tag=b3481 NC_000913.3 RefSeq CDS 3618588 3618989 . + 0 ID=cds3416;Parent=gene3542;Dbxref=ASAP:ABE-0011366,UniProtKB/Swiss-Prot:P0A6Z6,Genbank:NP_417938.1,EcoGene:EG11519,GeneID:947995;Name=NP_417938.1;gbkey=CDS;gene=nikR;product=transcriptional repressor%2C Ni-binding;protein_id=NP_417938.1;transl_table=11 NC_000913.3 RefSeq gene 3619192 3623427 . + . ID=gene3543;Dbxref=EcoGene:EG10847,GeneID:947994;Name=rhsB;gbkey=Gene;gene=rhsB;gene_biotype=protein_coding;gene_synonym=ECK3466,JW5679;locus_tag=b3482 NC_000913.3 RefSeq CDS 3619192 3623427 . + 0 ID=cds3417;Parent=gene3543;Dbxref=ASAP:ABE-0011371,UniProtKB/Swiss-Prot:P16917,Genbank:YP_026224.1,EcoGene:EG10847,GeneID:947994;Name=YP_026224.1;Note=rhsB protein in rhs element;gbkey=CDS;gene=rhsB;product=Rhs protein with DUF4329 family putative toxin domain%3B putative neighboring cell growth inhibitor;protein_id=YP_026224.1;transl_table=11 NC_000913.3 RefSeq gene 3623399 3623782 . + . ID=gene3544;Dbxref=EcoGene:EG11520,GeneID:947993;Name=yhhH;gbkey=Gene;gene=yhhH;gene_biotype=protein_coding;gene_synonym=ECK3467,JW3449;locus_tag=b3483 NC_000913.3 RefSeq CDS 3623399 3623782 . + 0 ID=cds3418;Parent=gene3544;Dbxref=ASAP:ABE-0011373,UniProtKB/Swiss-Prot:P28911,Genbank:NP_417940.2,EcoGene:EG11520,GeneID:947993;Name=NP_417940.2;gbkey=CDS;gene=yhhH;product=putative NTF2 fold immunity protein for polymorphic toxin RhsB;protein_id=NP_417940.2;transl_table=11 NC_000913.3 RefSeq gene 3623887 3624237 . + . ID=gene3545;Dbxref=EcoGene:EG14369,GeneID:1450291;Name=yrhC;gbkey=Gene;gene=yrhC;gene_biotype=pseudogene;gene_synonym=ECK3468,JW5678;locus_tag=b4552;pseudo=true NC_000913.3 RefSeq CDS 3623887 3624237 . + 0 ID=cds3419;Parent=gene3545;Dbxref=ASAP:ABE-0285073,EcoGene:EG14369,GeneID:1450291;Note=pseudogene fragment;gbkey=CDS;gene=yrhC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3624378 3625514 . + . ID=gene3546;Dbxref=EcoGene:EG11525,GeneID:947992;Name=yhhI;gbkey=Gene;gene=yhhI;gene_biotype=protein_coding;gene_synonym=ECK3469,JW3451;locus_tag=b3484 NC_000913.3 RefSeq CDS 3624378 3625514 . + 0 ID=cds3420;Parent=gene3546;Dbxref=ASAP:ABE-0011377,UniProtKB/Swiss-Prot:P28912,Genbank:NP_417941.1,EcoGene:EG11525,GeneID:947992;Name=NP_417941.1;Note=putative receptor;gbkey=CDS;gene=yhhI;product=putative transposase;protein_id=NP_417941.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3625589 3625670 . + . ID=id436;Note=RIP260 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3625679 3626803 . - . ID=gene3547;Dbxref=EcoGene:EG11767,GeneID:947991;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;gene_synonym=ECK3470,JW5677;locus_tag=b3485 NC_000913.3 RefSeq CDS 3625679 3626803 . - 0 ID=cds3421;Parent=gene3547;Dbxref=ASAP:ABE-0011379,UniProtKB/Swiss-Prot:P0AGH1,Genbank:NP_417942.6,EcoGene:EG11767,GeneID:947991;Name=NP_417942.6;Note=putative transporter;gbkey=CDS;gene=yhhJ;product=putative ABC transporter permease;protein_id=NP_417942.6;transl_table=11 NC_000913.3 RefSeq gene 3626803 3629538 . - . ID=gene3548;Dbxref=EcoGene:EG12223,GeneID:947998;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;gene_synonym=ECK3471,JW5676,yhiG,yhiH;locus_tag=b3486 NC_000913.3 RefSeq CDS 3626803 3629538 . - 0 ID=cds3422;Parent=gene3548;Dbxref=ASAP:ABE-0011381,UniProtKB/Swiss-Prot:P37624,Genbank:YP_026225.1,EcoGene:EG12223,GeneID:947998;Name=YP_026225.1;Note=ribosome-associated ATPase%2C ATP-binding domain (N-terminal);gbkey=CDS;gene=rbbA;product=ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein;protein_id=YP_026225.1;transl_table=11 NC_000913.3 RefSeq gene 3629535 3630602 . - . ID=gene3549;Dbxref=EcoGene:EG12224,GeneID:948003;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;gene_synonym=ECK3472,JW3454;locus_tag=b3487 NC_000913.3 RefSeq CDS 3629535 3630602 . - 0 ID=cds3423;Parent=gene3549;Dbxref=ASAP:ABE-0011385,UniProtKB/Swiss-Prot:P37626,Genbank:NP_417944.1,EcoGene:EG12224,GeneID:948003;Name=NP_417944.1;Note=putative membrane protein;gbkey=CDS;gene=yhiI;product=putative membrane fusion protein (MFP) of efflux pump;protein_id=NP_417944.1;transl_table=11 NC_000913.3 RefSeq gene 3630968 3632590 . - . ID=gene3550;Dbxref=EcoGene:EG12225,GeneID:948001;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;gene_synonym=ECK3473,JW3455;locus_tag=b3488 NC_000913.3 RefSeq CDS 3630968 3632590 . - 0 ID=cds3424;Parent=gene3550;Dbxref=ASAP:ABE-0011387,UniProtKB/Swiss-Prot:P37627,Genbank:NP_417945.1,EcoGene:EG12225,GeneID:948001;Name=NP_417945.1;gbkey=CDS;gene=yhiJ;product=DUF4049 family protein;protein_id=NP_417945.1;transl_table=11 NC_000913.3 RefSeq gene 3632852 3634458 . - . ID=gene3551;Dbxref=EcoGene:EG12227,GeneID:947999;Name=yhiL;gbkey=Gene;gene=yhiL;gene_biotype=pseudogene;gene_synonym=ECK3475,JW5674,yhiK;locus_tag=b4660;pseudo=true NC_000913.3 RefSeq CDS 3633265 3634458 . - 0 ID=cds3425;Parent=gene3551;Dbxref=ASAP:ABE-0011391,ASAP:ABE-0011393,UniProtKB/Swiss-Prot:P37629,EcoGene:EG12227,GeneID:947999;Note=pseudogene%2C DUF4049 family protein;gbkey=CDS;gene=yhiL;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3632852 3633265 . - 0 ID=cds3425;Parent=gene3551;Dbxref=ASAP:ABE-0011391,ASAP:ABE-0011393,UniProtKB/Swiss-Prot:P37629,EcoGene:EG12227,GeneID:947999;Note=pseudogene%2C DUF4049 family protein;gbkey=CDS;gene=yhiL;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3634841 3635893 . + . ID=gene3552;Dbxref=EcoGene:EG12228,GeneID:947997;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;gene_synonym=ECK3476,JW5944;locus_tag=b3491 NC_000913.3 RefSeq CDS 3634841 3635893 . + 0 ID=cds3426;Parent=gene3552;Dbxref=ASAP:ABE-0011400,UniProtKB/Swiss-Prot:P37630,Genbank:NP_417948.4,EcoGene:EG12228,GeneID:947997;Name=NP_417948.4;gbkey=CDS;gene=yhiM;product=acid resistance protein%2C inner membrane;protein_id=NP_417948.4;transl_table=11 NC_000913.3 RefSeq gene 3636208 3637410 . - . ID=gene3553;Dbxref=EcoGene:EG12229,GeneID:947996;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;gene_synonym=ECK3477,JW3459;locus_tag=b3492 NC_000913.3 RefSeq CDS 3636208 3637410 . - 0 ID=cds3427;Parent=gene3553;Dbxref=ASAP:ABE-0011402,UniProtKB/Swiss-Prot:P37631,Genbank:NP_417949.1,EcoGene:EG12229,GeneID:947996;Name=NP_417949.1;gbkey=CDS;gene=yhiN;product=putative oxidoreductase;protein_id=NP_417949.1;transl_table=11 NC_000913.3 RefSeq gene 3637642 3639141 . + . ID=gene3554;Dbxref=EcoGene:EG12230,GeneID:948009;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;gene_synonym=ECK3478,JW3460,pit;locus_tag=b3493 NC_000913.3 RefSeq CDS 3637642 3639141 . + 0 ID=cds3428;Parent=gene3554;Dbxref=ASAP:ABE-0011407,UniProtKB/Swiss-Prot:P0AFJ7,Genbank:NP_417950.1,EcoGene:EG12230,GeneID:948009;Name=NP_417950.1;Note=low-affinity phosphate transport;gbkey=CDS;gene=pitA;product=phosphate transporter%2C low-affinity%3B tellurite importer;protein_id=NP_417950.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3639209 3639306 . + . ID=id437;Note=RIP261 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3639385 3639720 . - . ID=gene3555;Dbxref=EcoGene:EG12231,GeneID:948008;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;gene_synonym=ECK3479,JW3461,yhiO;locus_tag=b3494 NC_000913.3 RefSeq CDS 3639385 3639720 . - 0 ID=cds3429;Parent=gene3555;Dbxref=ASAP:ABE-0011410,UniProtKB/Swiss-Prot:P0A8S5,Genbank:NP_417951.1,EcoGene:EG12231,GeneID:948008;Name=NP_417951.1;gbkey=CDS;gene=uspB;product=universal stress (ethanol tolerance) protein B;protein_id=NP_417951.1;transl_table=11 NC_000913.3 RefSeq gene 3640111 3640545 . + . ID=gene3556;Dbxref=EcoGene:EG11390,GeneID:948007;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;gene_synonym=ECK3480,JW3462;locus_tag=b3495 NC_000913.3 RefSeq CDS 3640111 3640545 . + 0 ID=cds3430;Parent=gene3556;Dbxref=ASAP:ABE-0011414,UniProtKB/Swiss-Prot:P0AED0,Genbank:NP_417952.1,EcoGene:EG11390,GeneID:948007;Name=NP_417952.1;Note=universal stress protein%3B broad regulatory function?;gbkey=CDS;gene=uspA;product=universal stress global response regulator;protein_id=NP_417952.1;transl_table=11 NC_000913.3 RefSeq gene 3640862 3642331 . + . ID=gene3557;Dbxref=EcoGene:EG12232,GeneID:948006;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;gene_synonym=ECK3481,JW3463,yhiP;locus_tag=b3496 NC_000913.3 RefSeq CDS 3640862 3642331 . + 0 ID=cds3431;Parent=gene3557;Dbxref=ASAP:ABE-0011417,UniProtKB/Swiss-Prot:P36837,Genbank:NP_417953.1,EcoGene:EG12232,GeneID:948006;Name=NP_417953.1;Note=putative transport protein;gbkey=CDS;gene=dtpB;product=dipeptide and tripeptide permease B;protein_id=NP_417953.1;transl_table=11 NC_000913.3 RefSeq gene 3642380 3643132 . - . ID=gene3558;Dbxref=EcoGene:EG12233,GeneID:948005;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;gene_synonym=ECK3482,JW5672,yhiQ;locus_tag=b3497 NC_000913.3 RefSeq CDS 3642380 3643132 . - 0 ID=cds3432;Parent=gene3558;Dbxref=ASAP:ABE-0011419,UniProtKB/Swiss-Prot:P68567,Genbank:NP_417954.1,EcoGene:EG12233,GeneID:948005;Name=NP_417954.1;gbkey=CDS;gene=rsmJ;product=16S rRNA m(2)G1516 methyltransferase%2C SAM-dependent;protein_id=NP_417954.1;transl_table=11 NC_000913.3 RefSeq gene 3643140 3645182 . - . ID=gene3559;Dbxref=EcoGene:EG11441,GeneID:948016;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;gene_synonym=ECK3483,JW3465,opdA;locus_tag=b3498 NC_000913.3 RefSeq CDS 3643140 3645182 . - 0 ID=cds3433;Parent=gene3559;Dbxref=ASAP:ABE-0011421,UniProtKB/Swiss-Prot:P27298,Genbank:NP_417955.1,EcoGene:EG11441,GeneID:948016;Name=NP_417955.1;gbkey=CDS;gene=prlC;product=oligopeptidase A;protein_id=NP_417955.1;transl_table=11 NC_000913.3 RefSeq gene 3645385 3646227 . + . ID=gene3560;Dbxref=EcoGene:EG12234,GeneID:948012;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;gene_synonym=ECK3484,JW3466,yhiR;locus_tag=b3499 NC_000913.3 RefSeq CDS 3645385 3646227 . + 0 ID=cds3434;Parent=gene3560;Dbxref=ASAP:ABE-0011428,UniProtKB/Swiss-Prot:P37634,Genbank:NP_417956.1,EcoGene:EG12234,GeneID:948012;Name=NP_417956.1;gbkey=CDS;gene=rlmJ;product=23S rRNA m(6)A2030 methyltransferase%2C SAM-dependent;protein_id=NP_417956.1;transl_table=11 NC_000913.3 RefSeq gene 3646299 3647651 . + . ID=gene3561;Dbxref=EcoGene:EG10412,GeneID:948014;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;gene_synonym=ECK3485,gorA,JW3467;locus_tag=b3500 NC_000913.3 RefSeq CDS 3646299 3647651 . + 0 ID=cds3435;Parent=gene3561;Dbxref=ASAP:ABE-0011432,UniProtKB/Swiss-Prot:P06715,Genbank:NP_417957.1,EcoGene:EG10412,GeneID:948014;Name=NP_417957.1;gbkey=CDS;gene=gor;product=glutathione oxidoreductase;protein_id=NP_417957.1;transl_table=11 NC_000913.3 RefSeq gene 3647705 3647788 . - . ID=gene3562;Dbxref=EcoGene:EG14431,GeneID:5061522;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;gene_synonym=ECK4422;locus_tag=b4613 NC_000913.3 RefSeq CDS 3647705 3647788 . - 0 ID=cds3436;Parent=gene3562;Dbxref=UniProtKB/Swiss-Prot:A5A624,Genbank:YP_001165328.2,EcoGene:EG14431,GeneID:5061522;Name=YP_001165328.2;gbkey=CDS;gene=dinQ;product=UV-inducible membrane toxin%2C DinQ-AgrB type I toxin-antitoxin system;protein_id=YP_001165328.2;transl_table=11 NC_000913.3 RefSeq gene 3648063 3648146 . + . ID=gene3563;Dbxref=EcoGene:EG31189,GeneID:19351531;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=antisense_RNA;gene_synonym=ECK4569;locus_tag=b4712 NC_000913.3 RefSeq ncRNA 3648063 3648146 . + . ID=rna125;Parent=gene3563;Dbxref=EcoGene:EG31189,GeneID:19351531;gbkey=ncRNA;gene=agrA;ncrna_class=antisense_RNA;product=inactive antisense sRNA NC_000913.3 RefSeq exon 3648063 3648146 . + . ID=id438;Parent=rna125;Dbxref=EcoGene:EG31189,GeneID:19351531;gbkey=ncRNA;gene=agrA;ncrna_class=antisense_RNA;product=inactive antisense sRNA NC_000913.3 RefSeq gene 3648294 3648377 . + . ID=gene3564;Dbxref=EcoGene:EG31190,GeneID:19351532;Name=agrB;gbkey=Gene;gene=agrB;gene_biotype=antisense_RNA;gene_synonym=ECK4570;locus_tag=b4713 NC_000913.3 RefSeq ncRNA 3648294 3648377 . + . ID=rna126;Parent=gene3564;Dbxref=EcoGene:EG31190,GeneID:19351532;gbkey=ncRNA;gene=agrB;ncrna_class=antisense_RNA;product=antisense sRNA antitoxin for the DinQ toxin NC_000913.3 RefSeq exon 3648294 3648377 . + . ID=id439;Parent=rna126;Dbxref=EcoGene:EG31190,GeneID:19351532;gbkey=ncRNA;gene=agrB;ncrna_class=antisense_RNA;product=antisense sRNA antitoxin for the DinQ toxin NC_000913.3 RefSeq gene 3648528 3648881 . + . ID=gene3565;Dbxref=EcoGene:EG12235,GeneID:948013;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;gene_synonym=arsE,ECK3486,JW3468;locus_tag=b3501 NC_000913.3 RefSeq CDS 3648528 3648881 . + 0 ID=cds3437;Parent=gene3565;Dbxref=ASAP:ABE-0011435,UniProtKB/Swiss-Prot:P37309,Genbank:NP_417958.1,EcoGene:EG12235,GeneID:948013;Name=NP_417958.1;Note=transcriptional repressor of chromosomal ars operon;gbkey=CDS;gene=arsR;product=arsenical resistance operon transcriptional repressor%3B autorepressor;protein_id=NP_417958.1;transl_table=11 NC_000913.3 RefSeq gene 3648935 3650224 . + . ID=gene3566;Dbxref=EcoGene:EG12236,GeneID:948011;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;gene_synonym=arsF,ECK3487,JW3469;locus_tag=b3502 NC_000913.3 RefSeq CDS 3648935 3650224 . + 0 ID=cds3438;Parent=gene3566;Dbxref=ASAP:ABE-0011437,UniProtKB/Swiss-Prot:P0AB93,Genbank:NP_417959.4,EcoGene:EG12236,GeneID:948011;Name=NP_417959.4;Note=arsenical pump membrane protein;gbkey=CDS;gene=arsB;product=arsenite/antimonite transporter;protein_id=NP_417959.4;transl_table=11 NC_000913.3 RefSeq gene 3650237 3650662 . + . ID=gene3567;Dbxref=EcoGene:EG12237,GeneID:948018;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;gene_synonym=arsG,ECK3488,JW3470;locus_tag=b3503 NC_000913.3 RefSeq CDS 3650237 3650662 . + 0 ID=cds3439;Parent=gene3567;Dbxref=ASAP:ABE-0011439,UniProtKB/Swiss-Prot:P0AB96,Genbank:NP_417960.1,EcoGene:EG12237,GeneID:948018;Name=NP_417960.1;gbkey=CDS;gene=arsC;product=arsenate reductase;protein_id=NP_417960.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3650712 3650811 . + . ID=id440;Note=RIP262 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3651291 3652031 . + . ID=gene3568;Dbxref=EcoGene:EG12238,GeneID:948017;Name=yhiS;gbkey=Gene;gene=yhiS;gene_biotype=pseudogene;gene_synonym=ECK3489,JW3471;locus_tag=b3504;part=1/2;pseudo=true NC_000913.3 RefSeq gene 3653231 3653713 . + . ID=gene3568;Dbxref=EcoGene:EG12238,GeneID:948017;Name=yhiS;gbkey=Gene;gene=yhiS;gene_biotype=pseudogene;gene_synonym=ECK3489,JW3471;locus_tag=b3504;part=2/2;pseudo=true NC_000913.3 RefSeq CDS 3651291 3652031 . + 0 ID=cds3440;Parent=gene3568;Dbxref=ASAP:ABE-0011443,UniProtKB/Swiss-Prot:P37635,EcoGene:EG12238,GeneID:948017;Note=pseudogene;gbkey=CDS;gene=yhiS;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3653231 3653713 . + 0 ID=cds3440;Parent=gene3568;Dbxref=ASAP:ABE-0011443,UniProtKB/Swiss-Prot:P37635,EcoGene:EG12238,GeneID:948017;Note=pseudogene;gbkey=CDS;gene=yhiS;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 3652036 3653230 . - . ID=id441;gbkey=mobile_element NC_000913.3 RefSeq gene 3652182 3653198 . - . ID=gene3569;Dbxref=EcoGene:EG40008,GeneID:948015;Name=insH1;gbkey=Gene;gene=insH1;gene_biotype=protein_coding;gene_synonym=ECK0261;locus_tag=b3505 NC_000913.3 RefSeq CDS 3652182 3653198 . - 0 ID=cds3441;Parent=gene3569;Dbxref=ASAP:ABE-0011446,UniProtKB/Swiss-Prot:P0CE58,Genbank:NP_417962.1,EcoGene:EG40008,GeneID:948015;Name=NP_417962.1;gbkey=CDS;gene=insH1;product=IS5 transposase and trans-activator;protein_id=NP_417962.1;transl_table=11 NC_000913.3 RefSeq gene 3653961 3654527 . + . ID=gene3570;Dbxref=EcoGene:EG11890,GeneID:948022;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;gene_synonym=ECK3490,JW3474;locus_tag=b3506 NC_000913.3 RefSeq CDS 3653961 3654527 . + 0 ID=cds3442;Parent=gene3570;Dbxref=ASAP:ABE-0011451,UniProtKB/Swiss-Prot:P37194,Genbank:NP_417963.4,EcoGene:EG11890,GeneID:948022;Name=NP_417963.4;Note=outer membrane protein induced after carbon starvation;gbkey=CDS;gene=slp;product=outer membrane lipoprotein;protein_id=NP_417963.4;transl_table=11 NC_000913.3 RefSeq gene 3654683 3655213 . + . ID=gene3571;Dbxref=EcoGene:EG11889,GeneID:948021;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;gene_synonym=ECK3491,JW3475,yhiF;locus_tag=b3507 NC_000913.3 RefSeq CDS 3654683 3655213 . + 0 ID=cds3443;Parent=gene3571;Dbxref=ASAP:ABE-0011454,UniProtKB/Swiss-Prot:P37195,Genbank:NP_417964.1,EcoGene:EG11889,GeneID:948021;Name=NP_417964.1;gbkey=CDS;gene=dctR;product=Putative LuxR family repressor for dicarboxylate transport;protein_id=NP_417964.1;transl_table=11 NC_000913.3 RefSeq gene 3655255 3655902 . - . ID=gene3572;Dbxref=EcoGene:EG11400,GeneID:948019;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;gene_synonym=ECK3492,JW5670,yhhE;locus_tag=b3508 NC_000913.3 RefSeq CDS 3655255 3655902 . - 0 ID=cds3444;Parent=gene3572;Dbxref=ASAP:ABE-0011456,UniProtKB/Swiss-Prot:P0AFV2,Genbank:NP_417965.1,EcoGene:EG11400,GeneID:948019;Name=NP_417965.1;Note=putative transport ATPase;gbkey=CDS;gene=yhiD;product=putative Mg(2+) transport ATPase%2C inner membrane protein;protein_id=NP_417965.1;transl_table=11 NC_000913.3 RefSeq gene 3655966 3656292 . - . ID=gene3573;Dbxref=EcoGene:EG11399,GeneID:948026;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;gene_synonym=ECK3493,JW5669,yhhD,yhiC;locus_tag=b3509 NC_000913.3 RefSeq CDS 3655966 3656292 . - 0 ID=cds3445;Parent=gene3573;Dbxref=ASAP:ABE-0011458,UniProtKB/Swiss-Prot:P0AET2,Genbank:NP_417966.4,EcoGene:EG11399,GeneID:948026;Name=NP_417966.4;gbkey=CDS;gene=hdeB;product=acid-resistance protein;protein_id=NP_417966.4;transl_table=11 NC_000913.3 RefSeq gene 3656408 3656740 . - . ID=gene3574;Dbxref=EcoGene:EG11398,GeneID:948025;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;gene_synonym=ECK3494,JW3478,yhhC,yhiB;locus_tag=b3510 NC_000913.3 RefSeq CDS 3656408 3656740 . - 0 ID=cds3446;Parent=gene3574;Dbxref=ASAP:ABE-0011464,UniProtKB/Swiss-Prot:P0AES9,Genbank:NP_417967.1,EcoGene:EG11398,GeneID:948025;Name=NP_417967.1;gbkey=CDS;gene=hdeA;product=stress response protein acid-resistance protein;protein_id=NP_417967.1;transl_table=11 NC_000913.3 RefSeq gene 3656995 3657567 . + . ID=gene3575;Dbxref=EcoGene:EG11495,GeneID:948024;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;gene_synonym=ECK3495,JW3479,yhiA;locus_tag=b3511 NC_000913.3 RefSeq CDS 3656995 3657567 . + 0 ID=cds3447;Parent=gene3575;Dbxref=ASAP:ABE-0011467,UniProtKB/Swiss-Prot:P0AET5,Genbank:NP_417968.1,EcoGene:EG11495,GeneID:948024;Name=NP_417968.1;gbkey=CDS;gene=hdeD;product=acid-resistance membrane protein;protein_id=NP_417968.1;transl_table=11 NC_000913.3 RefSeq gene 3657986 3658054 . - . ID=gene3576;Dbxref=EcoGene:EG31188,GeneID:11115378;Name=arrS;gbkey=Gene;gene=arrS;gene_biotype=antisense_RNA;gene_synonym=ECK4516;locus_tag=b4704 NC_000913.3 RefSeq ncRNA 3657986 3658054 . - . ID=rna127;Parent=gene3576;Dbxref=EcoGene:EG31188,GeneID:11115378;gbkey=ncRNA;gene=arrS;ncrna_class=antisense_RNA;product=antisense sRNA ArrS%2C function unknown NC_000913.3 RefSeq exon 3657986 3658054 . - . ID=id442;Parent=rna127;Dbxref=EcoGene:EG31188,GeneID:11115378;gbkey=ncRNA;gene=arrS;ncrna_class=antisense_RNA;product=antisense sRNA ArrS%2C function unknown NC_000913.3 RefSeq gene 3658366 3658893 . + . ID=gene3577;Dbxref=EcoGene:EG11544,GeneID:948023;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;gene_synonym=ECK3496,JW3480,yhiE,yhiT;locus_tag=b3512 NC_000913.3 RefSeq CDS 3658366 3658893 . + 0 ID=cds3448;Parent=gene3577;Dbxref=ASAP:ABE-0011475,UniProtKB/Swiss-Prot:P63204,Genbank:NP_417969.1,EcoGene:EG11544,GeneID:948023;Name=NP_417969.1;gbkey=CDS;gene=gadE;product=gad regulon transcriptional activator;protein_id=NP_417969.1;transl_table=11 NC_000913.3 RefSeq gene 3659232 3660389 . + . ID=gene3578;Dbxref=EcoGene:EG12240,GeneID:948031;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;gene_synonym=ECK3497,JW3481,yhiU;locus_tag=b3513 NC_000913.3 RefSeq CDS 3659232 3660389 . + 0 ID=cds3449;Parent=gene3578;Dbxref=ASAP:ABE-0011478,UniProtKB/Swiss-Prot:P37636,Genbank:NP_417970.1,EcoGene:EG12240,GeneID:948031;Name=NP_417970.1;Note=putative membrane protein;gbkey=CDS;gene=mdtE;product=anaerobic multidrug efflux transporter%2C ArcA-regulated;protein_id=NP_417970.1;transl_table=11 NC_000913.3 RefSeq gene 3660414 3663527 . + . ID=gene3579;Dbxref=EcoGene:EG12241,GeneID:948030;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;gene_synonym=ECK3498,JW3482,yhiV;locus_tag=b3514 NC_000913.3 RefSeq CDS 3660414 3663527 . + 0 ID=cds3450;Parent=gene3579;Dbxref=ASAP:ABE-0011480,UniProtKB/Swiss-Prot:P37637,Genbank:NP_417971.1,EcoGene:EG12241,GeneID:948030;Name=NP_417971.1;Note=putative transport system permease protein;gbkey=CDS;gene=mdtF;product=anaerobic multidrug efflux transporter%2C ArcA-regulated;protein_id=NP_417971.1;transl_table=11 NC_000913.3 RefSeq gene 3663890 3664618 . - . ID=gene3580;Dbxref=EcoGene:EG12242,GeneID:948029;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;gene_synonym=ECK3499,JW3483,yhiW;locus_tag=b3515 NC_000913.3 RefSeq CDS 3663890 3664618 . - 0 ID=cds3451;Parent=gene3580;Dbxref=ASAP:ABE-0011482,UniProtKB/Swiss-Prot:P63201,Genbank:NP_417972.1,EcoGene:EG12242,GeneID:948029;Name=NP_417972.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=gadW;product=transcriptional activator of gadA and gadBC%3B repressor of gadX;protein_id=NP_417972.1;transl_table=11 NC_000913.3 RefSeq gene 3664864 3664968 . + . ID=gene3581;Dbxref=EcoGene:EG31164,GeneID:2847729;Name=gadY;gbkey=Gene;gene=gadY;gene_biotype=antisense_RNA;gene_synonym=ECK3500,IS183,JWR0255;locus_tag=b4452 NC_000913.3 RefSeq ncRNA 3664864 3664968 . + . ID=rna128;Parent=gene3581;Dbxref=ASAP:ABE-0047272,EcoGene:EG31164,GeneID:2847729;Note=identified in a large scale screen;gbkey=ncRNA;gene=gadY;ncrna_class=antisense_RNA;product=sRNA antisense regulator of gadAB transcriptional activator GadX mRNA%2C Hfq-dependent NC_000913.3 RefSeq exon 3664864 3664968 . + . ID=id443;Parent=rna128;Dbxref=ASAP:ABE-0047272,EcoGene:EG31164,GeneID:2847729;Note=identified in a large scale screen;gbkey=ncRNA;gene=gadY;ncrna_class=antisense_RNA;product=sRNA antisense regulator of gadAB transcriptional activator GadX mRNA%2C Hfq-dependent NC_000913.3 RefSeq gene 3664986 3665810 . - . ID=gene3582;Dbxref=EcoGene:EG12243,GeneID:948028;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;gene_synonym=ECK3501,JW3484,yhiX;locus_tag=b3516 NC_000913.3 RefSeq CDS 3664986 3665810 . - 0 ID=cds3452;Parent=gene3582;Dbxref=ASAP:ABE-0011487,UniProtKB/Swiss-Prot:P37639,Genbank:NP_417973.1,EcoGene:EG12243,GeneID:948028;Name=NP_417973.1;gbkey=CDS;gene=gadX;product=acid resistance regulon transcriptional activator%3B autoactivator;protein_id=NP_417973.1;transl_table=11 NC_000913.3 RefSeq gene 3666180 3667580 . - . ID=gene3583;Dbxref=EcoGene:EG50009,GeneID:948027;Name=gadA;gbkey=Gene;gene=gadA;gene_biotype=protein_coding;gene_synonym=ECK3502,gadS,JW3485;locus_tag=b3517 NC_000913.3 RefSeq CDS 3666180 3667580 . - 0 ID=cds3453;Parent=gene3583;Dbxref=ASAP:ABE-0011490,UniProtKB/Swiss-Prot:P69908,Genbank:NP_417974.1,EcoGene:EG50009,GeneID:948027;Name=NP_417974.1;Note=glutamate decarboxylase isozyme;gbkey=CDS;gene=gadA;product=glutamate decarboxylase A%2C PLP-dependent;protein_id=NP_417974.1;transl_table=11 NC_000913.3 RefSeq gene 3667791 3669188 . - . ID=gene3584;Dbxref=EcoGene:EG12244,GeneID:948038;Name=yhjA;gbkey=Gene;gene=yhjA;gene_biotype=protein_coding;gene_synonym=ECK3503,JW3486;locus_tag=b3518 NC_000913.3 RefSeq CDS 3667791 3669188 . - 0 ID=cds3454;Parent=gene3584;Dbxref=ASAP:ABE-0011493,UniProtKB/Swiss-Prot:P37197,Genbank:NP_417975.1,EcoGene:EG12244,GeneID:948038;Name=NP_417975.1;Note=putative cytochrome C peroxidase;gbkey=CDS;gene=yhjA;product=putative cytochrome C peroxidase;protein_id=NP_417975.1;transl_table=11 NC_000913.3 RefSeq gene 3669592 3671241 . + . ID=gene3585;Dbxref=EcoGene:EG12245,GeneID:948037;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;gene_synonym=ECK3504,JW3487;locus_tag=b3519 NC_000913.3 RefSeq CDS 3669592 3671241 . + 0 ID=cds3455;Parent=gene3585;Dbxref=ASAP:ABE-0011497,UniProtKB/Swiss-Prot:P62601,Genbank:NP_417976.1,EcoGene:EG12245,GeneID:948037;Name=NP_417976.1;gbkey=CDS;gene=treF;product=cytoplasmic trehalase;protein_id=NP_417976.1;transl_table=11 NC_000913.3 RefSeq gene 3671292 3671894 . - . ID=gene3586;Dbxref=EcoGene:EG12246,GeneID:948036;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;gene_synonym=ECK3505,JW3488;locus_tag=b3520 NC_000913.3 RefSeq CDS 3671292 3671894 . - 0 ID=cds3456;Parent=gene3586;Dbxref=ASAP:ABE-0011499,UniProtKB/Swiss-Prot:P37640,Genbank:NP_417977.1,EcoGene:EG12246,GeneID:948036;Name=NP_417977.1;Note=putative regulator;gbkey=CDS;gene=yhjB;product=putative DNA-binding transcriptional response regulator;protein_id=NP_417977.1;transl_table=11 NC_000913.3 RefSeq gene 3672414 3673313 . + . ID=gene3587;Dbxref=EcoGene:EG12247,GeneID:948035;Name=yhjC;gbkey=Gene;gene=yhjC;gene_biotype=protein_coding;gene_synonym=ECK3506,JW3489;locus_tag=b3521 NC_000913.3 RefSeq CDS 3672414 3673313 . + 0 ID=cds3457;Parent=gene3587;Dbxref=ASAP:ABE-0011503,UniProtKB/Swiss-Prot:P37641,Genbank:NP_417978.2,EcoGene:EG12247,GeneID:948035;Name=NP_417978.2;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yhjC;product=LysR family putative transcriptional regulator;protein_id=NP_417978.2;transl_table=11 NC_000913.3 RefSeq gene 3673362 3674375 . + . ID=gene3588;Dbxref=EcoGene:EG12248,GeneID:948033;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;gene_synonym=ECK3507,JW3490;locus_tag=b3522 NC_000913.3 RefSeq CDS 3673362 3674375 . + 0 ID=cds3458;Parent=gene3588;Dbxref=ASAP:ABE-0011505,UniProtKB/Swiss-Prot:P37642,Genbank:NP_417979.1,EcoGene:EG12248,GeneID:948033;Name=NP_417979.1;gbkey=CDS;gene=yhjD;product=inner membrane putative BrbK family alternate lipid exporter;protein_id=NP_417979.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3674381 3674473 . + . ID=id444;Note=REP263 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3674786 3676108 . + . ID=gene3589;Dbxref=EcoGene:EG12249,GeneID:948032;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;gene_synonym=ECK3508,JW3491;locus_tag=b3523 NC_000913.3 RefSeq CDS 3674786 3676108 . + 0 ID=cds3459;Parent=gene3589;Dbxref=ASAP:ABE-0011509,UniProtKB/Swiss-Prot:P37643,Genbank:NP_417980.1,EcoGene:EG12249,GeneID:948032;Name=NP_417980.1;Note=putative transport protein;gbkey=CDS;gene=yhjE;product=putative MFS transporter%3B membrane protein;protein_id=NP_417980.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3676121 3676281 . + . ID=id445;Note=RIP264 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3676290 3678350 . - . ID=gene3590;Dbxref=EcoGene:EG12251,GeneID:948043;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;gene_synonym=ECK3509,JW3492,yhjF;locus_tag=b3524 NC_000913.3 RefSeq CDS 3676290 3678350 . - 0 ID=cds3460;Parent=gene3590;Dbxref=ASAP:ABE-0011512,UniProtKB/Swiss-Prot:P37645,Genbank:NP_417981.2,EcoGene:EG12251,GeneID:948043;Name=NP_417981.2;gbkey=CDS;gene=yhjG;product=putative inner membrane-anchored periplasmic AsmA family protein;protein_id=NP_417981.2;transl_table=11 NC_000913.3 RefSeq gene 3678420 3679187 . - . ID=gene3591;Dbxref=EcoGene:EG12252,GeneID:948042;Name=yhjH;gbkey=Gene;gene=yhjH;gene_biotype=protein_coding;gene_synonym=ECK3510,JW3493;locus_tag=b3525 NC_000913.3 RefSeq CDS 3678420 3679187 . - 0 ID=cds3461;Parent=gene3591;Dbxref=ASAP:ABE-0011515,UniProtKB/Swiss-Prot:P37646,Genbank:NP_417982.2,EcoGene:EG12252,GeneID:948042;Name=NP_417982.2;gbkey=CDS;gene=yhjH;product=cyclic-di-GMP phosphodiesterase%2C FlhDC-regulated;protein_id=NP_417982.2;transl_table=11 NC_000913.3 RefSeq gene 3679419 3680348 . + . ID=gene3592;Dbxref=EcoGene:EG12253,GeneID:948041;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;gene_synonym=ECK3511,JW5668,yhjI;locus_tag=b3526 NC_000913.3 RefSeq CDS 3679419 3680348 . + 0 ID=cds3462;Parent=gene3592;Dbxref=ASAP:ABE-0011519,UniProtKB/Swiss-Prot:P37647,Genbank:NP_417983.2,EcoGene:EG12253,GeneID:948041;Name=NP_417983.2;gbkey=CDS;gene=kdgK;product=2-dehydro-3-deoxygluconokinase;protein_id=NP_417983.2;transl_table=11 NC_000913.3 RefSeq repeat_region 3680367 3680442 . + . ID=id446;Note=REP265 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3680444 3681940 . - . ID=gene3593;Dbxref=EcoGene:EG12254,GeneID:948040;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;gene_synonym=ECK3512,JW3495;locus_tag=b3527 NC_000913.3 RefSeq CDS 3680444 3681940 . - 0 ID=cds3463;Parent=gene3593;Dbxref=ASAP:ABE-0011524,UniProtKB/Swiss-Prot:P37648,Genbank:NP_417984.1,EcoGene:EG12254,GeneID:948040;Name=NP_417984.1;gbkey=CDS;gene=yhjJ;product=putative periplasmic M16 family chaperone;protein_id=NP_417984.1;transl_table=11 NC_000913.3 RefSeq gene 3682161 3683447 . - . ID=gene3594;Dbxref=EcoGene:EG20044,GeneID:948039;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;gene_synonym=ECK3513,JW3496,out;locus_tag=b3528 NC_000913.3 RefSeq CDS 3682161 3683447 . - 0 ID=cds3464;Parent=gene3594;Dbxref=ASAP:ABE-0011527,UniProtKB/Swiss-Prot:P0A830,Genbank:NP_417985.1,EcoGene:EG20044,GeneID:948039;Name=NP_417985.1;Note=uptake of C4-dicarboxylic acids;gbkey=CDS;gene=dctA;product=C4-dicarboxylic acid%2C orotate and citrate transporter;protein_id=NP_417985.1;transl_table=11 NC_000913.3 RefSeq gene 3683630 3685618 . - . ID=gene3595;Dbxref=EcoGene:EG12256,GeneID:948048;Name=yhjK;gbkey=Gene;gene=yhjK;gene_biotype=protein_coding;gene_synonym=ECK3514,JW5943;locus_tag=b3529 NC_000913.3 RefSeq CDS 3683630 3685618 . - 0 ID=cds3465;Parent=gene3595;Dbxref=ASAP:ABE-0011533,UniProtKB/Swiss-Prot:P37649,Genbank:NP_417986.4,EcoGene:EG12256,GeneID:948048;Name=NP_417986.4;gbkey=CDS;gene=yhjK;product=cyclic-di-GMP phosphodiesterase;protein_id=NP_417986.4;transl_table=11 NC_000913.3 RefSeq gene 3685700 3689173 . - . ID=gene3596;Dbxref=EcoGene:EG12257,GeneID:948047;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;gene_synonym=ECK3515,JW5942,yhjL;locus_tag=b3530 NC_000913.3 RefSeq CDS 3685700 3689173 . - 0 ID=cds3466;Parent=gene3596;Dbxref=ASAP:ABE-0011538,UniProtKB/Swiss-Prot:P37650,Genbank:YP_026226.4,EcoGene:EG12257,GeneID:948047;Name=YP_026226.4;Note=putative oxidoreductase subunit;gbkey=CDS;gene=bcsC;product=cellulose synthase subunit;protein_id=YP_026226.4;transl_table=11 NC_000913.3 RefSeq gene 3689155 3690261 . - . ID=gene3597;Dbxref=EcoGene:EG12258,GeneID:948046;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;gene_synonym=bcsC,ECK3516,JW3499,yhjM;locus_tag=b3531 NC_000913.3 RefSeq CDS 3689155 3690261 . - 0 ID=cds3467;Parent=gene3597;Dbxref=ASAP:ABE-0011541,UniProtKB/Swiss-Prot:P37651,Genbank:NP_417988.1,EcoGene:EG12258,GeneID:948046;Name=NP_417988.1;gbkey=CDS;gene=bcsZ;product=endo-1%2C4-D-glucanase;protein_id=NP_417988.1;transl_table=11 NC_000913.3 RefSeq gene 3690268 3692607 . - . ID=gene3598;Dbxref=EcoGene:EG12259,GeneID:948045;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;gene_synonym=ECK3517,JW3500,yhjN;locus_tag=b3532 NC_000913.3 RefSeq CDS 3690268 3692607 . - 0 ID=cds3468;Parent=gene3598;Dbxref=ASAP:ABE-0011545,UniProtKB/Swiss-Prot:P37652,Genbank:NP_417989.1,EcoGene:EG12259,GeneID:948045;Name=NP_417989.1;gbkey=CDS;gene=bcsB;product=regulator of cellulose synthase%2C cyclic di-GMP binding;protein_id=NP_417989.1;transl_table=11 NC_000913.3 RefSeq gene 3692618 3695236 . - . ID=gene3599;Dbxref=EcoGene:EG12260,GeneID:948053;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;gene_synonym=ECK3518,JW5665,yhjO,yhjP;locus_tag=b3533 NC_000913.3 RefSeq CDS 3692618 3695236 . - 0 ID=cds3469;Parent=gene3599;Dbxref=ASAP:ABE-0011547,UniProtKB/Swiss-Prot:P37653,Genbank:NP_417990.4,EcoGene:EG12260,GeneID:948053;Name=NP_417990.4;Note=putative cellulose synthase;gbkey=CDS;gene=bcsA;product=cellulose synthase%2C catalytic subunit;protein_id=NP_417990.4;transl_table=11 NC_000913.3 RefSeq gene 3695233 3695985 . - . ID=gene3600;Dbxref=EcoGene:EG12261,GeneID:948052;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=pseudogene;gene_synonym=ECK3519,JW5941,yhjQ;locus_tag=b3534;pseudo=true NC_000913.3 RefSeq CDS 3695233 3695985 . - 0 ID=cds3470;Parent=gene3600;Dbxref=ASAP:ABE-0011549,UniProtKB/Swiss-Prot:P37655,EcoGene:EG12261,GeneID:948052;Note=involved in cellulose production%2C minD superfamily (pseudogene);gbkey=CDS;gene=bcsQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3695997 3696185 . - . ID=gene3601;Dbxref=EcoGene:EG12262,GeneID:948051;Name=yhjR;gbkey=Gene;gene=yhjR;gene_biotype=protein_coding;gene_synonym=ECK3520,JW3503;locus_tag=b3535 NC_000913.3 RefSeq CDS 3695997 3696185 . - 0 ID=cds3471;Parent=gene3601;Dbxref=ASAP:ABE-0011551,UniProtKB/Swiss-Prot:P0ADJ3,Genbank:NP_417992.1,EcoGene:EG12262,GeneID:948051;Name=NP_417992.1;gbkey=CDS;gene=yhjR;product=DUF2629 family protein;protein_id=NP_417992.1;transl_table=11 NC_000913.3 RefSeq gene 3696458 3698029 . + . ID=gene3602;Dbxref=EcoGene:EG12263,GeneID:948050;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;gene_synonym=ECK3521,JW3504,yhjS;locus_tag=b3536 NC_000913.3 RefSeq CDS 3696458 3698029 . + 0 ID=cds3472;Parent=gene3602;Dbxref=ASAP:ABE-0011554,UniProtKB/Swiss-Prot:P37657,Genbank:NP_417993.1,EcoGene:EG12263,GeneID:948050;Name=NP_417993.1;Note=conserved hypothetical protein~Salmonella ortholog implicated in the biosynthesis of cellulose%2C although the precise role remains unclear;gbkey=CDS;gene=bcsE;product=cellulose production protein;protein_id=NP_417993.1;transl_table=11 NC_000913.3 RefSeq gene 3698026 3698217 . + . ID=gene3603;Dbxref=EcoGene:EG12264,GeneID:948059;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;gene_synonym=ECK3522,JW5663,yhjT;locus_tag=b3537 NC_000913.3 RefSeq CDS 3698026 3698217 . + 0 ID=cds3473;Parent=gene3603;Dbxref=ASAP:ABE-0011556,UniProtKB/Swiss-Prot:P0ADJ5,Genbank:NP_417994.2,EcoGene:EG12264,GeneID:948059;Name=NP_417994.2;gbkey=CDS;gene=bcsF;product=DUF2636 family cellulose production small membrane protein;protein_id=NP_417994.2;transl_table=11 NC_000913.3 RefSeq gene 3698214 3699893 . + . ID=gene3604;Dbxref=EcoGene:EG12265,GeneID:948058;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;gene_synonym=ECK3523,JW3506,yhjU;locus_tag=b3538 NC_000913.3 RefSeq CDS 3698214 3699893 . + 0 ID=cds3474;Parent=gene3604;Dbxref=ASAP:ABE-0011558,UniProtKB/Swiss-Prot:P37659,Genbank:NP_417995.1,EcoGene:EG12265,GeneID:948058;Name=NP_417995.1;gbkey=CDS;gene=bcsG;product=DUF3260 family cellulose production inner membrane protein;protein_id=NP_417995.1;transl_table=11 NC_000913.3 RefSeq gene 3699980 3700087 . - . ID=gene3605;Dbxref=EcoGene:EG14406,GeneID:2847730;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;gene_synonym=ECK3524,JW5966;locus_tag=b4453 NC_000913.3 RefSeq CDS 3699980 3700087 . - 0 ID=cds3475;Parent=gene3605;Dbxref=ASAP:ABE-0047284,UniProtKB/Swiss-Prot:Q6BF25,Genbank:YP_026227.1,EcoGene:EG14406,GeneID:2847730;Name=YP_026227.1;Note=small toxic polypeptide;gbkey=CDS;gene=ldrD;product=toxic polypeptide%2C small;protein_id=YP_026227.1;transl_table=11 NC_000913.3 RefSeq gene 3700136 3700201 . + . ID=gene3606;Dbxref=EcoGene:EG31142,GeneID:2847731;Name=rdlD;gbkey=Gene;gene=rdlD;gene_biotype=antisense_RNA;gene_synonym=ECK3525,JWR0256;locus_tag=b4454 NC_000913.3 RefSeq ncRNA 3700136 3700201 . + . ID=rna129;Parent=gene3606;Dbxref=ASAP:ABE-0047273,EcoGene:EG31142,GeneID:2847731;Note=antisense RNA%2C trans-acting regulator of ldrD translation;gbkey=ncRNA;gene=rdlD;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrD translation%3B proposed addiction module in LDR-D repeat%2C with toxic peptide LdrD NC_000913.3 RefSeq exon 3700136 3700201 . + . ID=id447;Parent=rna129;Dbxref=ASAP:ABE-0047273,EcoGene:EG31142,GeneID:2847731;Note=antisense RNA%2C trans-acting regulator of ldrD translation;gbkey=ncRNA;gene=rdlD;ncrna_class=antisense_RNA;product=sRNA antisense regulator affects LdrD translation%3B proposed addiction module in LDR-D repeat%2C with toxic peptide LdrD NC_000913.3 RefSeq gene 3700563 3701834 . + . ID=gene3607;Dbxref=EcoGene:EG12266,GeneID:948057;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;gene_synonym=ECK3526,JW3508;locus_tag=b3539 NC_000913.3 RefSeq CDS 3700563 3701834 . + 0 ID=cds3476;Parent=gene3607;Dbxref=ASAP:ABE-0011562,UniProtKB/Swiss-Prot:P37660,Genbank:NP_417996.1,EcoGene:EG12266,GeneID:948057;Name=NP_417996.1;Note=putative transporter protein;gbkey=CDS;gene=yhjV;product=putative transporter;protein_id=NP_417996.1;transl_table=11 NC_000913.3 RefSeq gene 3701864 3702868 . - . ID=gene3608;Dbxref=EcoGene:EG12628,GeneID:948056;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;gene_synonym=ECK3527,JW3509;locus_tag=b3540 NC_000913.3 RefSeq CDS 3701864 3702868 . - 0 ID=cds3477;Parent=gene3608;Dbxref=ASAP:ABE-0011564,UniProtKB/Swiss-Prot:P37313,Genbank:NP_417997.1,EcoGene:EG12628,GeneID:948056;Name=NP_417997.1;Note=putative ATP-binding component of dipeptide transport system;gbkey=CDS;gene=dppF;product=dipeptide/heme ABC transporter ATPas;protein_id=NP_417997.1;transl_table=11 NC_000913.3 RefSeq gene 3702865 3703848 . - . ID=gene3609;Dbxref=EcoGene:EG12627,GeneID:948065;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;gene_synonym=ECK3528,JW3510;locus_tag=b3541 NC_000913.3 RefSeq CDS 3702865 3703848 . - 0 ID=cds3478;Parent=gene3609;Dbxref=ASAP:ABE-0011566,UniProtKB/Swiss-Prot:P0AAG0,Genbank:NP_417998.1,EcoGene:EG12627,GeneID:948065;Name=NP_417998.1;Note=putative ATP-binding component of dipeptide transport system;gbkey=CDS;gene=dppD;product=dipeptide/heme ABC transporter ATPas;protein_id=NP_417998.1;transl_table=11 NC_000913.3 RefSeq gene 3703859 3704761 . - . ID=gene3610;Dbxref=EcoGene:EG12626,GeneID:948064;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;gene_synonym=ECK3529,JW3511;locus_tag=b3542 NC_000913.3 RefSeq CDS 3703859 3704761 . - 0 ID=cds3479;Parent=gene3610;Dbxref=ASAP:ABE-0011570,UniProtKB/Swiss-Prot:P0AEG1,Genbank:NP_417999.1,EcoGene:EG12626,GeneID:948064;Name=NP_417999.1;Note=dipeptide transport system permease protein 2%3B membrane component of ABC superfamily;gbkey=CDS;gene=dppC;product=dipeptide/heme ABC transporter permease;protein_id=NP_417999.1;transl_table=11 NC_000913.3 RefSeq gene 3704771 3705790 . - . ID=gene3611;Dbxref=EcoGene:EG12625,GeneID:948063;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;gene_synonym=ECK3530,JW3512;locus_tag=b3543 NC_000913.3 RefSeq CDS 3704771 3705790 . - 0 ID=cds3480;Parent=gene3611;Dbxref=ASAP:ABE-0011572,UniProtKB/Swiss-Prot:P0AEF8,Genbank:NP_418000.1,EcoGene:EG12625,GeneID:948063;Name=NP_418000.1;Note=dipeptide transport system permease protein 1%3B membrane component of ABC superfamily;gbkey=CDS;gene=dppB;product=dipeptide/heme ABC transporter permease;protein_id=NP_418000.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3705963 3706060 . + . ID=id448;Note=RIP266 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3706098 3707705 . - . ID=gene3612;Dbxref=EcoGene:EG10248,GeneID:948062;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;gene_synonym=alu,dpp,ECK3531,fpp,JW3513;locus_tag=b3544 NC_000913.3 RefSeq CDS 3706098 3707705 . - 0 ID=cds3481;Parent=gene3612;Dbxref=ASAP:ABE-0011576,UniProtKB/Swiss-Prot:P23847,Genbank:NP_418001.1,EcoGene:EG10248,GeneID:948062;Name=NP_418001.1;Note=dipeptide transport protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=dppA;product=dipeptide/heme ABC transporter periplasmic binding protein%3B dipeptide chemotaxis receptor;protein_id=NP_418001.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3708272 3708357 . + . ID=id449;Note=REP267 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3708616 3708692 . - . ID=gene3613;Dbxref=EcoGene:EG30066,GeneID:948061;Name=proK;gbkey=Gene;gene=proK;gene_biotype=tRNA;gene_synonym=ECK3532,JWR0080,proV;locus_tag=b3545 NC_000913.3 RefSeq tRNA 3708616 3708692 . - . ID=rna130;Parent=gene3613;Dbxref=ASAP:ABE-0011579,EcoGene:EG30066,GeneID:948061;Note=anticodon: CGG~proline tRNA1;gbkey=tRNA;gene=proK;product=tRNA-Pro NC_000913.3 RefSeq exon 3708616 3708692 . - . ID=id450;Parent=rna130;Dbxref=ASAP:ABE-0011579,EcoGene:EG30066,GeneID:948061;Note=anticodon: CGG~proline tRNA1;gbkey=tRNA;gene=proK;product=tRNA-Pro NC_000913.3 RefSeq gene 3708784 3710475 . - . ID=gene3614;Dbxref=EcoGene:EG12267,GeneID:948068;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;gene_synonym=ECK3533,JW5660,pagC,yhjW;locus_tag=b3546 NC_000913.3 RefSeq CDS 3708784 3710475 . - 0 ID=cds3482;Parent=gene3614;Dbxref=ASAP:ABE-0011581,UniProtKB/Swiss-Prot:P37661,Genbank:NP_418002.2,EcoGene:EG12267,GeneID:948068;Name=NP_418002.2;gbkey=CDS;gene=eptB;product=KDO phosphoethanolamine transferase%2C Ca(2+)-inducible;protein_id=NP_418002.2;transl_table=11 NC_000913.3 RefSeq gene 3710799 3712007 . - . ID=gene3615;Dbxref=EcoGene:EG12268,GeneID:948066;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;gene_synonym=ECK3534,JW3516,oxlT;locus_tag=b3547 NC_000913.3 RefSeq CDS 3710799 3712007 . - 0 ID=cds3483;Parent=gene3615;Dbxref=ASAP:ABE-0011586,UniProtKB/Swiss-Prot:P37662,Genbank:NP_418003.1,EcoGene:EG12268,GeneID:948066;Name=NP_418003.1;Note=putative resistance protein;gbkey=CDS;gene=yhjX;product=pyruvate-inducible inner membrane protein%2C putative transporter;protein_id=NP_418003.1;transl_table=11 NC_000913.3 RefSeq gene 3712236 3712934 . - . ID=gene3616;Dbxref=EcoGene:EG12269,GeneID:948073;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;gene_synonym=ECK3535,JW5659;locus_tag=b3548 NC_000913.3 RefSeq CDS 3712236 3712934 . - 0 ID=cds3484;Parent=gene3616;Dbxref=ASAP:ABE-0011589,UniProtKB/Swiss-Prot:P37663,Genbank:NP_418004.4,EcoGene:EG12269,GeneID:948073;Name=NP_418004.4;Note=putative lipase;gbkey=CDS;gene=yhjY;product=autotransporter beta-domain protein;protein_id=NP_418004.4;transl_table=11 NC_000913.3 RefSeq gene 3713092 3713655 . + . ID=gene3617;Dbxref=EcoGene:EG10986,GeneID:947137;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;gene_synonym=ECK3536,JW3518,tagA;locus_tag=b3549 NC_000913.3 RefSeq CDS 3713092 3713655 . + 0 ID=cds3485;Parent=gene3617;Dbxref=ASAP:ABE-0011593,UniProtKB/Swiss-Prot:P05100,Genbank:NP_418005.1,EcoGene:EG10986,GeneID:947137;Name=NP_418005.1;gbkey=CDS;gene=tag;product=3-methyl-adenine DNA glycosylase I%2C constitutive;protein_id=NP_418005.1;transl_table=11 NC_000913.3 RefSeq gene 3713652 3714092 . + . ID=gene3618;Dbxref=EcoGene:EG12270,GeneID:946460;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;gene_synonym=ECK3537,JW3519;locus_tag=b3550 NC_000913.3 RefSeq CDS 3713652 3714092 . + 0 ID=cds3486;Parent=gene3618;Dbxref=ASAP:ABE-0011595,UniProtKB/Swiss-Prot:P37664,Genbank:NP_418006.1,EcoGene:EG12270,GeneID:946460;Name=NP_418006.1;gbkey=CDS;gene=yiaC;product=GNAT family putative N-acetyltransferase;protein_id=NP_418006.1;transl_table=11 NC_000913.3 RefSeq gene 3714061 3716394 . - . ID=gene3619;Dbxref=EcoGene:EG10124,GeneID:946915;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;gene_synonym=ECK3538,JW5940;locus_tag=b3551 NC_000913.3 RefSeq CDS 3714061 3716394 . - 0 ID=cds3487;Parent=gene3619;Dbxref=ASAP:ABE-0011597,UniProtKB/Swiss-Prot:P20099,Genbank:NP_418007.3,EcoGene:EG10124,GeneID:946915;Name=NP_418007.3;gbkey=CDS;gene=bisC;product=biotin sulfoxide reductase;protein_id=NP_418007.3;transl_table=11 NC_000913.3 RefSeq gene 3716547 3717206 . + . ID=gene3620;Dbxref=EcoGene:EG12271,GeneID:948075;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;gene_synonym=ECK3539,JW5657;locus_tag=b3552 NC_000913.3 RefSeq CDS 3716547 3717206 . + 0 ID=cds3488;Parent=gene3620;Dbxref=ASAP:ABE-0011601,UniProtKB/Swiss-Prot:P37665,Genbank:YP_026228.1,EcoGene:EG12271,GeneID:948075;Name=YP_026228.1;Note=putative outer membrane protein;gbkey=CDS;gene=yiaD;product=multicopy suppressor of bamB%3B outer membrane lipoprotein;protein_id=YP_026228.1;transl_table=11 NC_000913.3 RefSeq gene 3717310 3718284 . + . ID=gene3621;Dbxref=EcoGene:EG12272,GeneID:948074;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;gene_synonym=ECK3540,JW5656,tkrA,yiaE;locus_tag=b3553 NC_000913.3 RefSeq CDS 3717310 3718284 . + 0 ID=cds3489;Parent=gene3621;Dbxref=ASAP:ABE-0011604,UniProtKB/Swiss-Prot:P37666,Genbank:NP_418009.2,EcoGene:EG12272,GeneID:948074;Name=NP_418009.2;gbkey=CDS;gene=ghrB;product=glyoxylate/hydroxypyruvate reductase B;protein_id=NP_418009.2;transl_table=11 NC_000913.3 RefSeq gene 3718334 3719044 . - . ID=gene3622;Dbxref=EcoGene:EG12273,GeneID:948072;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;gene_synonym=ECK3541,JW5655;locus_tag=b3554 NC_000913.3 RefSeq CDS 3718334 3719044 . - 0 ID=cds3490;Parent=gene3622;Dbxref=ASAP:ABE-0011606,UniProtKB/Swiss-Prot:P0ADK0,Genbank:NP_418010.2,EcoGene:EG12273,GeneID:948072;Name=NP_418010.2;gbkey=CDS;gene=yiaF;product=barrier effect co-colonization resistance factor%3B DUF3053 family lipoprotein;protein_id=NP_418010.2;transl_table=11 NC_000913.3 RefSeq gene 3719478 3719768 . + . ID=gene3623;Dbxref=EcoGene:EG12624,GeneID:948071;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;gene_synonym=ECK3542,JW3524;locus_tag=b3555 NC_000913.3 RefSeq CDS 3719478 3719768 . + 0 ID=cds3491;Parent=gene3623;Dbxref=ASAP:ABE-0011612,UniProtKB/Swiss-Prot:P0A9V5,Genbank:NP_418011.1,EcoGene:EG12624,GeneID:948071;Name=NP_418011.1;gbkey=CDS;gene=yiaG;product=HTH_CROC1 family putative transcriptional regulator;protein_id=NP_418011.1;transl_table=11 NC_000913.3 RefSeq gene 3720049 3720261 . + . ID=gene3624;Dbxref=EcoGene:EG10166,GeneID:948070;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=ECK3543,JW3525;locus_tag=b3556 NC_000913.3 RefSeq CDS 3720049 3720261 . + 0 ID=cds3492;Parent=gene3624;Dbxref=ASAP:ABE-0011616,UniProtKB/Swiss-Prot:P0A9X9,Genbank:NP_418012.1,EcoGene:EG10166,GeneID:948070;Name=NP_418012.1;Note=cold shock protein 7.4%2C transcriptional activator of hns;gbkey=CDS;gene=cspA;product=RNA chaperone and antiterminator%2C cold-inducible;protein_id=NP_418012.1;transl_table=11 NC_000913.3 RefSeq gene 3720448 3720632 . - . ID=gene3625;Dbxref=EcoGene:EG14436,GeneID:5625573;Name=mokA;gbkey=Gene;gene=mokA;gene_biotype=pseudogene;gene_synonym=ECK4448;locus_tag=b4647;pseudo=true NC_000913.3 RefSeq CDS 3720448 3720632 . - 0 ID=cds3493;Parent=gene3625;Dbxref=EcoGene:EG14436,GeneID:5625573;Note=pseudogene%2C overlapping regulatory peptide%2C enables hokB~completely contained in another CDS;gbkey=CDS;gene=mokA;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3720448 3720600 . - . ID=gene3626;Dbxref=EcoGene:EG12346,GeneID:2847732;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;gene_synonym=ECK3544,JW3526,yiaZ;locus_tag=b4455 NC_000913.3 RefSeq CDS 3720448 3720600 . - 0 ID=cds3494;Parent=gene3626;Dbxref=ASAP:ABE-0047285,UniProtKB/Swiss-Prot:P37305,Genbank:YP_026229.1,EcoGene:EG12346,GeneID:2847732;Name=YP_026229.1;Note=small toxic membrane polypeptide~IS150 insertion and apparent 39 bp deletion disrupt the associated mokA and sokA genes~completely contained in another CDS;gbkey=CDS;gene=hokA;product=toxic polypeptide%2C small;protein_id=YP_026229.1;transl_table=11 NC_000913.3 RefSeq region 3720633 3722075 . + . ID=id451;gbkey=mobile_element NC_000913.3 RefSeq gene 3720680 3721201 . + . ID=gene3627;Dbxref=EcoGene:EG40010,GeneID:948082;Name=insJ;gbkey=Gene;gene=insJ;gene_biotype=protein_coding;gene_synonym=ECK3545;locus_tag=b3557 NC_000913.3 RefSeq CDS 3720680 3721201 . + 0 ID=cds3495;Parent=gene3627;Dbxref=ASAP:ABE-0011620,UniProtKB/Swiss-Prot:P19768,Genbank:NP_418014.1,EcoGene:EG40010,GeneID:948082;Name=NP_418014.1;gbkey=CDS;gene=insJ;product=IS150 transposase A;protein_id=NP_418014.1;transl_table=11 NC_000913.3 RefSeq gene 3721198 3722049 . + . ID=gene3628;Dbxref=EcoGene:EG40011,GeneID:948081;Name=insK;gbkey=Gene;gene=insK;gene_biotype=protein_coding;gene_synonym=dinS,ECK3546;locus_tag=b3558 NC_000913.3 RefSeq CDS 3721198 3722049 . + 0 ID=cds3496;Parent=gene3628;Dbxref=ASAP:ABE-0011622,UniProtKB/Swiss-Prot:P19769,Genbank:NP_418015.1,EcoGene:EG40011,GeneID:948081;Name=NP_418015.1;gbkey=CDS;gene=insK;product=IS150 transposase B;protein_id=NP_418015.1;transl_table=11 NC_000913.3 RefSeq gene 3722076 3722105 . + . ID=gene3629;Dbxref=EcoGene:EG31176,GeneID:5061523;Name=sokA;gbkey=Gene;gene=sokA;gene_biotype=ncRNA_pseudogene;gene_synonym=ECK4423;locus_tag=b4614;pseudo=true NC_000913.3 RefSeq ncRNA 3722076 3722105 . + . ID=rna131;Parent=gene3629;Dbxref=EcoGene:EG31176,GeneID:5061523;Note=pseudogene%2C sRNA antisense regulator blocking mokA/hokA translation;gbkey=ncRNA;gene=sokA;ncrna_class=other;pseudo=true NC_000913.3 RefSeq exon 3722076 3722105 . + . ID=id452;Parent=rna131;Dbxref=EcoGene:EG31176,GeneID:5061523;Note=pseudogene%2C sRNA antisense regulator blocking mokA/hokA translation;gbkey=ncRNA;gene=sokA;ncrna_class=other;pseudo=true NC_000913.3 RefSeq gene 3722328 3724397 . - . ID=gene3630;Dbxref=EcoGene:EG10410,GeneID:948080;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;gene_synonym=ECK3547,gly-act,JW3530;locus_tag=b3559 NC_000913.3 RefSeq CDS 3722328 3724397 . - 0 ID=cds3497;Parent=gene3630;Dbxref=ASAP:ABE-0011624,UniProtKB/Swiss-Prot:P00961,Genbank:NP_418016.1,EcoGene:EG10410,GeneID:948080;Name=NP_418016.1;gbkey=CDS;gene=glyS;product=glycine tRNA synthetase%2C beta subunit;protein_id=NP_418016.1;transl_table=11 NC_000913.3 RefSeq gene 3724407 3725318 . - . ID=gene3631;Dbxref=EcoGene:EG10409,GeneID:948079;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;gene_synonym=cfcA,ECK3548,glyS,JW3531;locus_tag=b3560 NC_000913.3 RefSeq CDS 3724407 3725318 . - 0 ID=cds3498;Parent=gene3631;Dbxref=ASAP:ABE-0011626,UniProtKB/Swiss-Prot:P00960,Genbank:NP_418017.1,EcoGene:EG10409,GeneID:948079;Name=NP_418017.1;gbkey=CDS;gene=glyQ;product=glycine tRNA synthetase%2C alpha subunit;protein_id=NP_418017.1;transl_table=11 NC_000913.3 RefSeq gene 3725413 3725712 . - . ID=gene3632;Dbxref=EcoGene:EG14400,GeneID:1450292;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;gene_synonym=ECK3549,JW3532;locus_tag=b4553 NC_000913.3 RefSeq CDS 3725413 3725712 . - 0 ID=cds3499;Parent=gene3632;Dbxref=ASAP:ABE-0285074,UniProtKB/Swiss-Prot:Q2M7M3,Genbank:YP_588469.1,EcoGene:EG14400,GeneID:1450292;Name=YP_588469.1;gbkey=CDS;gene=ysaB;product=uncharacterized protein;protein_id=YP_588469.1;transl_table=11 NC_000913.3 RefSeq gene 3725887 3726882 . + . ID=gene3633;Dbxref=EcoGene:EG12274,GeneID:948077;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;gene_synonym=ECK3550,JW3533,yiaH;locus_tag=b3561 NC_000913.3 RefSeq CDS 3725887 3726882 . + 0 ID=cds3500;Parent=gene3633;Dbxref=ASAP:ABE-0011630,UniProtKB/Swiss-Prot:P37669,Genbank:NP_418018.1,EcoGene:EG12274,GeneID:948077;Name=NP_418018.1;gbkey=CDS;gene=wecH;product=O-acetyltransferase for enterobacterial common antigen (ECA);protein_id=NP_418018.1;transl_table=11 NC_000913.3 RefSeq gene 3726924 3727361 . - . ID=gene3634;Dbxref=EcoGene:EG11186,GeneID:948078;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;gene_synonym=ECK3551,JW3534;locus_tag=b3562 NC_000913.3 RefSeq CDS 3726924 3727361 . - 0 ID=cds3501;Parent=gene3634;Dbxref=ASAP:ABE-0011632,UniProtKB/Swiss-Prot:P0ADJ8,Genbank:NP_418019.4,EcoGene:EG11186,GeneID:948078;Name=NP_418019.4;gbkey=CDS;gene=yiaA;product=YiaAB family inner membrane protein%2C tandem domains;protein_id=NP_418019.4;transl_table=11 NC_000913.3 RefSeq gene 3727407 3727748 . - . ID=gene3635;Dbxref=EcoGene:EG11267,GeneID:948152;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;gene_synonym=ECK3552,JW5654;locus_tag=b3563 NC_000913.3 RefSeq CDS 3727407 3727748 . - 0 ID=cds3502;Parent=gene3635;Dbxref=ASAP:ABE-0011634,UniProtKB/Swiss-Prot:P11286,Genbank:NP_418020.2,EcoGene:EG11267,GeneID:948152;Name=NP_418020.2;gbkey=CDS;gene=yiaB;product=YiaAB family inner membrane protein;protein_id=NP_418020.2;transl_table=11 NC_000913.3 RefSeq gene 3727917 3729371 . - . ID=gene3636;Dbxref=EcoGene:EG11075,GeneID:948133;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;gene_synonym=ECK3553,JW3536;locus_tag=b3564 NC_000913.3 RefSeq CDS 3727917 3729371 . - 0 ID=cds3503;Parent=gene3636;Dbxref=ASAP:ABE-0011637,UniProtKB/Swiss-Prot:P09099,Genbank:NP_418021.1,EcoGene:EG11075,GeneID:948133;Name=NP_418021.1;gbkey=CDS;gene=xylB;product=xylulokinase;protein_id=NP_418021.1;transl_table=11 NC_000913.3 RefSeq gene 3729443 3730765 . - . ID=gene3637;Dbxref=EcoGene:EG11074,GeneID:948141;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;gene_synonym=ECK3554,JW3537;locus_tag=b3565 NC_000913.3 RefSeq CDS 3729443 3730765 . - 0 ID=cds3504;Parent=gene3637;Dbxref=ASAP:ABE-0011639,UniProtKB/Swiss-Prot:P00944,Genbank:NP_418022.1,EcoGene:EG11074,GeneID:948141;Name=NP_418022.1;gbkey=CDS;gene=xylA;product=D-xylose isomerase;protein_id=NP_418022.1;transl_table=11 NC_000913.3 RefSeq gene 3731131 3732123 . + . ID=gene3638;Dbxref=EcoGene:EG20252,GeneID:948090;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;gene_synonym=ECK3555,JW3538,xylT;locus_tag=b3566 NC_000913.3 RefSeq CDS 3731131 3732123 . + 0 ID=cds3505;Parent=gene3638;Dbxref=ASAP:ABE-0011646,UniProtKB/Swiss-Prot:P37387,Genbank:NP_418023.1,EcoGene:EG20252,GeneID:948090;Name=NP_418023.1;Note=xylose binding protein transport system%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=xylF;product=D-xylose transporter subunit;protein_id=NP_418023.1;transl_table=11 NC_000913.3 RefSeq gene 3732201 3733742 . + . ID=gene3639;Dbxref=EcoGene:EG12275,GeneID:948127;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;gene_synonym=ECK3556,JW3539;locus_tag=b3567 NC_000913.3 RefSeq CDS 3732201 3733742 . + 0 ID=cds3506;Parent=gene3639;Dbxref=ASAP:ABE-0011648,UniProtKB/Swiss-Prot:P37388,Genbank:NP_418024.1,EcoGene:EG12275,GeneID:948127;Name=NP_418024.1;Note=putative ATP-binding protein of xylose transport system;gbkey=CDS;gene=xylG;product=D-xylose ABC transporter dual domain ATPase;protein_id=NP_418024.1;transl_table=11 NC_000913.3 RefSeq gene 3733720 3734901 . + . ID=gene3640;Dbxref=EcoGene:EG12276,GeneID:948083;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;gene_synonym=ECK3557,JW3540;locus_tag=b3568 NC_000913.3 RefSeq CDS 3733720 3734901 . + 0 ID=cds3507;Parent=gene3640;Dbxref=ASAP:ABE-0011650,UniProtKB/Swiss-Prot:P0AGI4,Genbank:NP_418025.1,EcoGene:EG12276,GeneID:948083;Name=NP_418025.1;Note=putative xylose transport%2C membrane component%3B membrane component of ABC superfamily;gbkey=CDS;gene=xylH;product=D-xylose ABC transporter permease;protein_id=NP_418025.1;transl_table=11 NC_000913.3 RefSeq gene 3734979 3736157 . + . ID=gene3641;Dbxref=EcoGene:EG20253,GeneID:948086;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;gene_synonym=ECK3558,JW3541;locus_tag=b3569 NC_000913.3 RefSeq CDS 3734979 3736157 . + 0 ID=cds3508;Parent=gene3641;Dbxref=ASAP:ABE-0011652,UniProtKB/Swiss-Prot:P0ACI3,Genbank:NP_418026.1,EcoGene:EG20253,GeneID:948086;Name=NP_418026.1;Note=putative regulator of xyl operon;gbkey=CDS;gene=xylR;product=xylose divergent operon transcriptional activator;protein_id=NP_418026.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3736154 3736324 . + . ID=id453;Note=REP268 (repetitive extragenic palindromic) element%3B contains 4 REP sequences;gbkey=repeat_region;gene=xylR NC_000913.3 RefSeq gene 3736353 3737177 . - . ID=gene3642;Dbxref=EcoGene:EG11360,GeneID:948089;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;gene_synonym=ECK3559,JW5653;locus_tag=b3570 NC_000913.3 RefSeq CDS 3736353 3737177 . - 0 ID=cds3509;Parent=gene3642;Dbxref=ASAP:ABE-0011655,UniProtKB/Swiss-Prot:P27297,Genbank:YP_026230.1,EcoGene:EG11360,GeneID:948089;Name=YP_026230.1;Note=putative ATP-binding protein;gbkey=CDS;gene=bax;product=putative glucosaminidase;protein_id=YP_026230.1;transl_table=11 NC_000913.3 RefSeq gene 3737497 3739527 . + . ID=gene3643;Dbxref=EcoGene:EG11316,GeneID:948088;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;gene_synonym=ECK3560,JW3543;locus_tag=b3571 NC_000913.3 RefSeq CDS 3737497 3739527 . + 0 ID=cds3510;Parent=gene3643;Dbxref=ASAP:ABE-0011668,UniProtKB/Swiss-Prot:P25718,Genbank:NP_418028.1,EcoGene:EG11316,GeneID:948088;Name=NP_418028.1;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=NP_418028.1;transl_table=11 NC_000913.3 RefSeq gene 3739705 3740958 . + . ID=gene3644;Dbxref=EcoGene:EG10107,GeneID:948087;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;gene_synonym=ECK3561,JW5652;locus_tag=b3572 NC_000913.3 RefSeq CDS 3739705 3740958 . + 0 ID=cds3511;Parent=gene3644;Dbxref=ASAP:ABE-0011671,UniProtKB/Swiss-Prot:P09053,Genbank:YP_026231.1,EcoGene:EG10107,GeneID:948087;Name=YP_026231.1;Note=alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase%2C transaminase C;gbkey=CDS;gene=avtA;product=valine-pyruvate aminotransferase%3B transaminase C%3B alanine-valine transaminase;protein_id=YP_026231.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3740964 3741061 . + . ID=id454;Note=RIP269 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3741109 3741582 . - . ID=gene3645;Dbxref=EcoGene:EG14319,GeneID:948085;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;gene_synonym=ECK3562,JW3545;locus_tag=b3573 NC_000913.3 RefSeq CDS 3741109 3741582 . - 0 ID=cds3512;Parent=gene3645;Dbxref=ASAP:ABE-0011674,UniProtKB/Swiss-Prot:P56256,Genbank:NP_418030.1,EcoGene:EG14319,GeneID:948085;Name=NP_418030.1;gbkey=CDS;gene=ysaA;product=putative hydrogenase%2C 4Fe-4S ferredoxin-type component;protein_id=NP_418030.1;transl_table=11 NC_000913.3 RefSeq gene 3741684 3742532 . - . ID=gene3646;Dbxref=EcoGene:EG12278,GeneID:948084;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;gene_synonym=ECK3563,JW3546;locus_tag=b3574 NC_000913.3 RefSeq CDS 3741684 3742532 . - 0 ID=cds3513;Parent=gene3646;Dbxref=ASAP:ABE-0011677,UniProtKB/Swiss-Prot:P37671,Genbank:NP_418031.1,EcoGene:EG12278,GeneID:948084;Name=NP_418031.1;gbkey=CDS;gene=yiaJ;product=transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon;protein_id=NP_418031.1;transl_table=11 NC_000913.3 RefSeq gene 3742733 3743731 . + . ID=gene3647;Dbxref=EcoGene:EG12279,GeneID:948096;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;gene_synonym=ECK3564,JW3547;locus_tag=b3575 NC_000913.3 RefSeq CDS 3742733 3743731 . + 0 ID=cds3514;Parent=gene3647;Dbxref=ASAP:ABE-0011682,UniProtKB/Swiss-Prot:P37672,Genbank:NP_418032.1,EcoGene:EG12279,GeneID:948096;Name=NP_418032.1;Note=putative dehydrogenase;gbkey=CDS;gene=yiaK;product=2%2C3-diketo-L-gulonate reductase%2C NADH-dependent;protein_id=NP_418032.1;transl_table=11 NC_000913.3 RefSeq gene 3743743 3744210 . + . ID=gene3648;Dbxref=EcoGene:EG12280,GeneID:948094;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;gene_synonym=ECK3565,JW3548;locus_tag=b3576 NC_000913.3 RefSeq CDS 3743743 3744210 . + 0 ID=cds3515;Parent=gene3648;Dbxref=ASAP:ABE-0011684,UniProtKB/Swiss-Prot:P37673,Genbank:NP_418033.1,EcoGene:EG12280,GeneID:948094;Name=NP_418033.1;Note=putative lipase;gbkey=CDS;gene=yiaL;product=DUF386 family protein;protein_id=NP_418033.1;transl_table=11 NC_000913.3 RefSeq gene 3744328 3744801 . + . ID=gene3649;Dbxref=EcoGene:EG12281,GeneID:948093;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;gene_synonym=ECK3566,JW3549;locus_tag=b3577 NC_000913.3 RefSeq CDS 3744328 3744801 . + 0 ID=cds3516;Parent=gene3649;Dbxref=ASAP:ABE-0011690,UniProtKB/Swiss-Prot:P37674,Genbank:NP_418034.1,EcoGene:EG12281,GeneID:948093;Name=NP_418034.1;gbkey=CDS;gene=yiaM;product=2%2C3-diketo-L-gulonate TRAP transporter small permease protein;protein_id=NP_418034.1;transl_table=11 NC_000913.3 RefSeq gene 3744804 3746081 . + . ID=gene3650;Dbxref=EcoGene:EG12282,GeneID:948092;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;gene_synonym=ECK3567,JW5651;locus_tag=b3578 NC_000913.3 RefSeq CDS 3744804 3746081 . + 0 ID=cds3517;Parent=gene3650;Dbxref=ASAP:ABE-0011692,UniProtKB/Swiss-Prot:P37675,Genbank:YP_026232.1,EcoGene:EG12282,GeneID:948092;Name=YP_026232.1;Note=putative membrane protein;gbkey=CDS;gene=yiaN;product=2%2C3-diketo-L-gulonate TRAP transporter large permease protein;protein_id=YP_026232.1;transl_table=11 NC_000913.3 RefSeq gene 3746094 3747080 . + . ID=gene3651;Dbxref=EcoGene:EG12283,GeneID:948091;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;gene_synonym=ECK3568,JW3551;locus_tag=b3579 NC_000913.3 RefSeq CDS 3746094 3747080 . + 0 ID=cds3518;Parent=gene3651;Dbxref=ASAP:ABE-0011694,UniProtKB/Swiss-Prot:P37676,Genbank:NP_418036.1,EcoGene:EG12283,GeneID:948091;Name=NP_418036.1;Note=putative solute-binding transport protein;gbkey=CDS;gene=yiaO;product=2%2C3-diketo-L-gulonate-binding periplasmic protein;protein_id=NP_418036.1;transl_table=11 NC_000913.3 RefSeq gene 3747084 3748580 . + . ID=gene3652;Dbxref=EcoGene:EG12284,GeneID:948101;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;gene_synonym=ECK3569,JW3552,lyx,xylK,yiaP;locus_tag=b3580 NC_000913.3 RefSeq CDS 3747084 3748580 . + 0 ID=cds3519;Parent=gene3652;Dbxref=ASAP:ABE-0011696,UniProtKB/Swiss-Prot:P37677,Genbank:NP_418037.1,EcoGene:EG12284,GeneID:948101;Name=NP_418037.1;Note=L-xylulose kinase%2C cryptic;gbkey=CDS;gene=lyxK;product=L-xylulose kinase;protein_id=NP_418037.1;transl_table=11 NC_000913.3 RefSeq gene 3748577 3749239 . + . ID=gene3653;Dbxref=EcoGene:EG12285,GeneID:948098;Name=sgbH;gbkey=Gene;gene=sgbH;gene_biotype=protein_coding;gene_synonym=ECK3570,JW3553,yiaQ;locus_tag=b3581 NC_000913.3 RefSeq CDS 3748577 3749239 . + 0 ID=cds3520;Parent=gene3653;Dbxref=ASAP:ABE-0011698,UniProtKB/Swiss-Prot:P37678,Genbank:NP_418038.1,EcoGene:EG12285,GeneID:948098;Name=NP_418038.1;Note=probable 3-hexulose 6-phosphate synthase;gbkey=CDS;gene=sgbH;product=3-keto-L-gulonate 6-phosphate decarboxylase;protein_id=NP_418038.1;transl_table=11 NC_000913.3 RefSeq gene 3749232 3750092 . + . ID=gene3654;Dbxref=EcoGene:EG12286,GeneID:948100;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;gene_synonym=ECK3571,JW5650,yiaR;locus_tag=b3582 NC_000913.3 RefSeq CDS 3749232 3750092 . + 0 ID=cds3521;Parent=gene3654;Dbxref=ASAP:ABE-0011700,UniProtKB/Swiss-Prot:P37679,Genbank:NP_418039.2,EcoGene:EG12286,GeneID:948100;Name=NP_418039.2;gbkey=CDS;gene=sgbU;product=putative L-xylulose 5-phosphate 3-epimerase;protein_id=NP_418039.2;transl_table=11 NC_000913.3 RefSeq gene 3750086 3750781 . + . ID=gene3655;Dbxref=EcoGene:EG12287,GeneID:948099;Name=sgbE;gbkey=Gene;gene=sgbE;gene_biotype=protein_coding;gene_synonym=ECK3572,JW3555,yiaS;locus_tag=b3583 NC_000913.3 RefSeq CDS 3750086 3750781 . + 0 ID=cds3522;Parent=gene3655;Dbxref=ASAP:ABE-0011702,UniProtKB/Swiss-Prot:P37680,Genbank:NP_418040.1,EcoGene:EG12287,GeneID:948099;Name=NP_418040.1;gbkey=CDS;gene=sgbE;product=L-ribulose-5-phosphate 4-epimerase;protein_id=NP_418040.1;transl_table=11 NC_000913.3 RefSeq gene 3750813 3750914 . - . ID=gene3656;Dbxref=EcoGene:EG14455,GeneID:5625574;Name=ysaC;gbkey=Gene;gene=ysaC;gene_biotype=pseudogene;gene_synonym=ECK4459;locus_tag=b4648;pseudo=true NC_000913.3 RefSeq CDS 3750813 3750914 . - 0 ID=cds3523;Parent=gene3656;Dbxref=EcoGene:EG14455,GeneID:5625574;Note=pseudogene;gbkey=CDS;gene=ysaC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3750918 3751109 . + . ID=gene3657;Dbxref=EcoGene:EG14456,GeneID:5625575;Name=ysaD;gbkey=Gene;gene=ysaD;gene_biotype=pseudogene;gene_synonym=ECK4460;locus_tag=b4649;pseudo=true NC_000913.3 RefSeq CDS 3750918 3751109 . + 0 ID=cds3524;Parent=gene3657;Dbxref=EcoGene:EG14456,GeneID:5625575;Note=pseudogene%2C internal sequence remnant;gbkey=CDS;gene=ysaD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3751128 3751868 . - . ID=gene3658;Dbxref=EcoGene:EG12288,GeneID:948097;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;gene_synonym=ECK3573,JW3556;locus_tag=b3584 NC_000913.3 RefSeq CDS 3751128 3751868 . - 0 ID=cds3525;Parent=gene3658;Dbxref=ASAP:ABE-0011704,UniProtKB/Swiss-Prot:P37681,Genbank:NP_418041.1,EcoGene:EG12288,GeneID:948097;Name=NP_418041.1;Note=putative outer membrane protein;gbkey=CDS;gene=yiaT;product=putative outer membrane protein;protein_id=NP_418041.1;transl_table=11 NC_000913.3 RefSeq gene 3751992 3752966 . + . ID=gene3659;Dbxref=EcoGene:EG12289,GeneID:948107;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;gene_synonym=ECK3574,JW3557;locus_tag=b3585 NC_000913.3 RefSeq CDS 3751992 3752966 . + 0 ID=cds3526;Parent=gene3659;Dbxref=ASAP:ABE-0011710,UniProtKB/Swiss-Prot:P37682,Genbank:NP_418042.1,EcoGene:EG12289,GeneID:948107;Name=NP_418042.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yiaU;product=putative DNA-binding transcriptional regulator;protein_id=NP_418042.1;transl_table=11 NC_000913.3 RefSeq gene 3752963 3754099 . - . ID=gene3660;Dbxref=EcoGene:EG12290,GeneID:948106;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;gene_synonym=ECK3575,JW3558;locus_tag=b3586 NC_000913.3 RefSeq CDS 3752963 3754099 . - 0 ID=cds3527;Parent=gene3660;Dbxref=ASAP:ABE-0011712,UniProtKB/Swiss-Prot:P37683,Genbank:NP_418043.1,EcoGene:EG12290,GeneID:948106;Name=NP_418043.1;Note=putative membrane protein;gbkey=CDS;gene=yiaV;product=signal-anchored membrane fusion protein (MFP) component of efflux pump;protein_id=NP_418043.1;transl_table=11 NC_000913.3 RefSeq gene 3754105 3754428 . - . ID=gene3661;Dbxref=EcoGene:EG12291,GeneID:948105;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;gene_synonym=ECK3576,JW3559;locus_tag=b3587 NC_000913.3 RefSeq CDS 3754105 3754428 . - 0 ID=cds3528;Parent=gene3661;Dbxref=ASAP:ABE-0011714,UniProtKB/Swiss-Prot:P0ADK4,Genbank:NP_418044.1,EcoGene:EG12291,GeneID:948105;Name=NP_418044.1;gbkey=CDS;gene=yiaW;product=DUF3302 family inner membrane protein;protein_id=NP_418044.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3754860 3754941 . + . ID=id455;Note=REP270 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3754973 3756511 . - . ID=gene3662;Dbxref=EcoGene:EG12292,GeneID:948104;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;gene_synonym=ECK3577,JW3561,yiaX;locus_tag=b3588 NC_000913.3 RefSeq CDS 3754973 3756511 . - 0 ID=cds3529;Parent=gene3662;Dbxref=ASAP:ABE-0011718,UniProtKB/Swiss-Prot:P37685,Genbank:NP_418045.4,EcoGene:EG12292,GeneID:948104;Name=NP_418045.4;Note=aldehyde dehydrogenase B (lactaldehyde dehydrogenase);gbkey=CDS;gene=aldB;product=aldehyde dehydrogenase B;protein_id=NP_418045.4;transl_table=11 NC_000913.3 RefSeq gene 3756676 3757827 . - . ID=gene3663;Dbxref=EcoGene:EG12293,GeneID:948102;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;gene_synonym=ECK3578,JW5648;locus_tag=b3589 NC_000913.3 RefSeq CDS 3756676 3757827 . - 0 ID=cds3530;Parent=gene3663;Dbxref=ASAP:ABE-0011725,UniProtKB/Swiss-Prot:P37686,Genbank:YP_026233.1,EcoGene:EG12293,GeneID:948102;Name=YP_026233.1;Note=putative oxidoreductase;gbkey=CDS;gene=yiaY;product=L-threonine dehydrogenase;protein_id=YP_026233.1;transl_table=11 NC_000913.3 RefSeq gene 3758017 3759861 . - . ID=gene3664;Dbxref=EcoGene:EG10942,GeneID:948103;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;gene_synonym=ECK3579,fdhA,JW3563;locus_tag=b3590 NC_000913.3 RefSeq CDS 3758017 3759861 . - 0 ID=cds3531;Parent=gene3664;Dbxref=ASAP:ABE-0011729,UniProtKB/Swiss-Prot:P14081,Genbank:NP_418047.1,EcoGene:EG10942,GeneID:948103;Name=NP_418047.1;gbkey=CDS;gene=selB;product=selenocysteinyl-tRNA-specific translation factor;protein_id=NP_418047.1;transl_table=11 NC_000913.3 RefSeq gene 3759858 3761249 . - . ID=gene3665;Dbxref=EcoGene:EG10941,GeneID:948124;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;gene_synonym=ECK3580,fdhA,JW3564;locus_tag=b3591 NC_000913.3 RefSeq CDS 3759858 3761249 . - 0 ID=cds3532;Parent=gene3665;Dbxref=ASAP:ABE-0011731,UniProtKB/Swiss-Prot:P0A821,Genbank:NP_418048.1,EcoGene:EG10941,GeneID:948124;Name=NP_418048.1;Note=selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase;gbkey=CDS;gene=selA;product=selenocysteine synthase;protein_id=NP_418048.1;transl_table=11 NC_000913.3 RefSeq gene 3761347 3761955 . - . ID=gene3666;Dbxref=EcoGene:EG11762,GeneID:948113;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;gene_synonym=ECK3581,JW3565;locus_tag=b3592 NC_000913.3 RefSeq CDS 3761347 3761955 . - 0 ID=cds3533;Parent=gene3666;Dbxref=ASAP:ABE-0011736,UniProtKB/Swiss-Prot:P0ACA1,Genbank:NP_418049.1,EcoGene:EG11762,GeneID:948113;Name=NP_418049.1;Note=putative S-transferase;gbkey=CDS;gene=yibF;product=glutathione S-transferase homolog;protein_id=NP_418049.1;transl_table=11 NC_000913.3 RefSeq gene 3762183 3766316 . + . ID=gene3667;Dbxref=EcoGene:EG10846,GeneID:948120;Name=rhsA;gbkey=Gene;gene=rhsA;gene_biotype=protein_coding;gene_synonym=ECK3582,JW3566;locus_tag=b3593 NC_000913.3 RefSeq CDS 3762183 3766316 . + 0 ID=cds3534;Parent=gene3667;Dbxref=ASAP:ABE-0011742,UniProtKB/Swiss-Prot:P16916,Genbank:NP_418050.1,EcoGene:EG10846,GeneID:948120;Name=NP_418050.1;Note=rhsA protein in rhs element;gbkey=CDS;gene=rhsA;product=Rhs protein with putative toxin 55 domain%3B putative polysaccharide synthesis/export protein%3B putative neighboring cell growth inhibitor;protein_id=NP_418050.1;transl_table=11 NC_000913.3 RefSeq gene 3766337 3767179 . + . ID=gene3668;Dbxref=EcoGene:EG11187,GeneID:948108;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;gene_synonym=ECK3583,JW3568;locus_tag=b3594 NC_000913.3 RefSeq CDS 3766337 3767179 . + 0 ID=cds3535;Parent=gene3668;Dbxref=ASAP:ABE-0011744,UniProtKB/Swiss-Prot:P0ADK6,Genbank:NP_418051.1,EcoGene:EG11187,GeneID:948108;Name=NP_418051.1;gbkey=CDS;gene=yibA;product=putative immunity protein for polymorphic toxin RhsA%3B HEAT-domain protein%3B lethality reduction protein;protein_id=NP_418051.1;transl_table=11 NC_000913.3 RefSeq gene 3767221 3768165 . + . ID=gene3669;Dbxref=EcoGene:EG11766,GeneID:948112;Name=rhsJ;gbkey=Gene;gene=rhsJ;gene_biotype=pseudogene;gene_synonym=ECK3584,JW5647,yibJ;locus_tag=b3595;pseudo=true NC_000913.3 RefSeq CDS 3767221 3768165 . + 0 ID=cds3536;Parent=gene3669;Dbxref=ASAP:ABE-0011746,UniProtKB/Swiss-Prot:P32109,EcoGene:EG11766,GeneID:948112;Note=Rhs-family protein;gbkey=CDS;gene=rhsJ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3768177 3768638 . + . ID=gene3670;Dbxref=EcoGene:EG11763,GeneID:948111;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;gene_synonym=ECK3585,JW3570;locus_tag=b3596 NC_000913.3 RefSeq CDS 3768177 3768638 . + 0 ID=cds3537;Parent=gene3670;Dbxref=ASAP:ABE-0011750,UniProtKB/Swiss-Prot:P32106,Genbank:NP_418053.1,EcoGene:EG11763,GeneID:948111;Name=NP_418053.1;gbkey=CDS;gene=yibG;product=TPR-like repeat protein;protein_id=NP_418053.1;transl_table=11 NC_000913.3 RefSeq gene 3768639 3768890 . + . ID=gene3671;Dbxref=EcoGene:EG14348,GeneID:5625576;Name=yibS;gbkey=Gene;gene=yibS;gene_biotype=pseudogene;gene_synonym=ECK4440;locus_tag=b4650;pseudo=true NC_000913.3 RefSeq CDS 3768639 3768890 . + 0 ID=cds3538;Parent=gene3671;Dbxref=EcoGene:EG14348,GeneID:5625576;Note=pseudogene%2C Rhs family protein;gbkey=CDS;gene=yibS;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3768892 3769256 . + . ID=gene3672;Dbxref=EcoGene:EG14439,GeneID:5625577;Name=yibW;gbkey=Gene;gene=yibW;gene_biotype=pseudogene;gene_synonym=ECK4450;locus_tag=b4651;pseudo=true NC_000913.3 RefSeq CDS 3768892 3768975 . + 0 ID=cds3539;Parent=gene3672;Dbxref=EcoGene:EG14439,GeneID:5625577;Note=pseudogene%2C rhsA-linked;gbkey=CDS;gene=yibW;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3768975 3769256 . + 0 ID=cds3539;Parent=gene3672;Dbxref=EcoGene:EG14439,GeneID:5625577;Note=pseudogene%2C rhsA-linked;gbkey=CDS;gene=yibW;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3769345 3769783 . + . ID=gene3673;Dbxref=EcoGene:EG14438,GeneID:5061524;Name=yibV;gbkey=Gene;gene=yibV;gene_biotype=pseudogene;gene_synonym=ECK4424;locus_tag=b4615;pseudo=true NC_000913.3 RefSeq CDS 3769345 3769671 . + 0 ID=cds3540;Parent=gene3673;Dbxref=UniProtKB/Swiss-Prot:A5A625,EcoGene:EG14438,GeneID:5061524;Note=pseudogene%2C putative cryptic Rhs immunity protein;gbkey=CDS;gene=yibV;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3769673 3769783 . + 0 ID=cds3540;Parent=gene3673;Dbxref=UniProtKB/Swiss-Prot:A5A625,EcoGene:EG14438,GeneID:5061524;Note=pseudogene%2C putative cryptic Rhs immunity protein;gbkey=CDS;gene=yibV;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3769948 3770146 . + . ID=gene3674;Dbxref=EcoGene:EG14437,GeneID:5625578;Name=yibU;gbkey=Gene;gene=yibU;gene_biotype=pseudogene;gene_synonym=ECK4449;locus_tag=b4652;pseudo=true NC_000913.3 RefSeq CDS 3769948 3770034 . + 0 ID=cds3541;Parent=gene3674;Dbxref=EcoGene:EG14437,GeneID:5625578;Note=pseudogene%2C H repeat-associated protein;gbkey=CDS;gene=yibU;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3770033 3770146 . + 0 ID=cds3541;Parent=gene3674;Dbxref=EcoGene:EG14437,GeneID:5625578;Note=pseudogene%2C H repeat-associated protein;gbkey=CDS;gene=yibU;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3770243 3771379 . - . ID=gene3675;Dbxref=EcoGene:EG11764,GeneID:948110;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;gene_synonym=ECK3586,JW3571;locus_tag=b3597 NC_000913.3 RefSeq CDS 3770243 3771379 . - 0 ID=cds3542;Parent=gene3675;Dbxref=ASAP:ABE-0011752,UniProtKB/Swiss-Prot:P0AFV0,Genbank:NP_418054.1,EcoGene:EG11764,GeneID:948110;Name=NP_418054.1;Note=putative membrane protein;gbkey=CDS;gene=yibH;product=putative membrane fusion protein (MFP) component of efflux pump;protein_id=NP_418054.1;transl_table=11 NC_000913.3 RefSeq gene 3771382 3771744 . - . ID=gene3676;Dbxref=EcoGene:EG11765,GeneID:948109;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;gene_synonym=ECK3587,JW3572;locus_tag=b3598 NC_000913.3 RefSeq CDS 3771382 3771744 . - 0 ID=cds3543;Parent=gene3676;Dbxref=ASAP:ABE-0011754,UniProtKB/Swiss-Prot:P32108,Genbank:NP_418055.1,EcoGene:EG11765,GeneID:948109;Name=NP_418055.1;gbkey=CDS;gene=yibI;product=DUF3302 family inner membrane protein;protein_id=NP_418055.1;transl_table=11 NC_000913.3 RefSeq gene 3772281 3774194 . + . ID=gene3677;Dbxref=EcoGene:EG10615,GeneID:948118;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;gene_synonym=ECK3588,JW3573,mtlC;locus_tag=b3599 NC_000913.3 RefSeq CDS 3772281 3774194 . + 0 ID=cds3544;Parent=gene3677;Dbxref=ASAP:ABE-0011761,UniProtKB/Swiss-Prot:P00550,Genbank:NP_418056.1,EcoGene:EG10615,GeneID:948118;Name=NP_418056.1;Note=PTS system%2C mannitol-specific enzyme IIABC components;gbkey=CDS;gene=mtlA;product=mannitol-specific PTS enzyme: IIA%2C IIB and IIC components;protein_id=NP_418056.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3774236 3774334 . + . ID=id456;Note=RIP271 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3774424 3775572 . + . ID=gene3678;Dbxref=EcoGene:EG10616,GeneID:948117;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;gene_synonym=ECK3589,JW3574;locus_tag=b3600 NC_000913.3 RefSeq CDS 3774424 3775572 . + 0 ID=cds3545;Parent=gene3678;Dbxref=ASAP:ABE-0011767,UniProtKB/Swiss-Prot:P09424,Genbank:NP_418057.1,EcoGene:EG10616,GeneID:948117;Name=NP_418057.1;Note=mannitol-1-phosphate dehydrogenase;gbkey=CDS;gene=mtlD;product=mannitol-1-phosphate dehydrogenase%2C NAD-dependent;protein_id=NP_418057.1;transl_table=11 NC_000913.3 RefSeq gene 3775572 3776159 . + . ID=gene3679;Dbxref=EcoGene:EG11965,GeneID:948116;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;gene_synonym=ECK3590,JW3575;locus_tag=b3601 NC_000913.3 RefSeq CDS 3775572 3776159 . + 0 ID=cds3546;Parent=gene3679;Dbxref=ASAP:ABE-0011769,UniProtKB/Swiss-Prot:P0AF10,Genbank:NP_418058.1,EcoGene:EG11965,GeneID:948116;Name=NP_418058.1;Note=repressor for mtl;gbkey=CDS;gene=mtlR;product=mannitol operon repressor;protein_id=NP_418058.1;transl_table=11 NC_000913.3 RefSeq gene 3776171 3776380 . - . ID=gene3680;Dbxref=EcoGene:EG14397,GeneID:1450299;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;gene_synonym=ECK3591,JW3576;locus_tag=b4554 NC_000913.3 RefSeq CDS 3776171 3776380 . - 0 ID=cds3547;Parent=gene3680;Dbxref=ASAP:ABE-0285075,UniProtKB/Swiss-Prot:Q2M7R5,Genbank:YP_588470.1,EcoGene:EG14397,GeneID:1450299;Name=YP_588470.1;gbkey=CDS;gene=yibT;product=uncharacterized protein;protein_id=YP_588470.1;transl_table=11 NC_000913.3 RefSeq gene 3776665 3777027 . + . ID=gene3681;Dbxref=EcoGene:EG11964,GeneID:948115;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;gene_synonym=ECK3592,JW3577;locus_tag=b3602 NC_000913.3 RefSeq CDS 3776665 3777027 . + 0 ID=cds3548;Parent=gene3681;Dbxref=ASAP:ABE-0011773,UniProtKB/Swiss-Prot:P0ADK8,Genbank:NP_418059.1,EcoGene:EG11964,GeneID:948115;Name=NP_418059.1;gbkey=CDS;gene=yibL;product=ribosome-associated DUF2810 family protein;protein_id=NP_418059.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3777064 3777097 . + . ID=id457;Note=REP272 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3777399 3779054 . + . ID=gene3682;Dbxref=EcoGene:EG11961,GeneID:948114;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;gene_synonym=ECK3593,JW3578,lct,lctP;locus_tag=b3603 NC_000913.3 RefSeq CDS 3777399 3779054 . + 0 ID=cds3549;Parent=gene3682;Dbxref=ASAP:ABE-0011777,UniProtKB/Swiss-Prot:P33231,Genbank:NP_418060.1,EcoGene:EG11961,GeneID:948114;Name=NP_418060.1;gbkey=CDS;gene=lldP;product=L-lactate permease;protein_id=NP_418060.1;transl_table=11 NC_000913.3 RefSeq gene 3779054 3779830 . + . ID=gene3683;Dbxref=EcoGene:EG11962,GeneID:948122;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;gene_synonym=ECK3594,JW3579,lct,lctR;locus_tag=b3604 NC_000913.3 RefSeq CDS 3779054 3779830 . + 0 ID=cds3550;Parent=gene3683;Dbxref=ASAP:ABE-0011782,UniProtKB/Swiss-Prot:P0ACL7,Genbank:NP_418061.1,EcoGene:EG11962,GeneID:948122;Name=NP_418061.1;Note=transcriptional regulator;gbkey=CDS;gene=lldR;product=dual role activator/repressor for lldPRD operon;protein_id=NP_418061.1;transl_table=11 NC_000913.3 RefSeq gene 3779827 3781017 . + . ID=gene3684;Dbxref=EcoGene:EG11963,GeneID:948121;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;gene_synonym=ECK3595,JW3580,lct,lctD;locus_tag=b3605 NC_000913.3 RefSeq CDS 3779827 3781017 . + 0 ID=cds3551;Parent=gene3684;Dbxref=ASAP:ABE-0011784,UniProtKB/Swiss-Prot:P33232,Genbank:NP_418062.1,EcoGene:EG11963,GeneID:948121;Name=NP_418062.1;Note=L-lactate dehydrogenase;gbkey=CDS;gene=lldD;product=L-lactate dehydrogenase%2C FMN-linked;protein_id=NP_418062.1;transl_table=11 NC_000913.3 RefSeq gene 3781215 3781688 . + . ID=gene3685;Dbxref=EcoGene:EG11888,GeneID:948119;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;gene_synonym=ECK3596,JW3581,yibK;locus_tag=b3606 NC_000913.3 RefSeq CDS 3781215 3781688 . + 0 ID=cds3552;Parent=gene3685;Dbxref=ASAP:ABE-0011790,UniProtKB/Swiss-Prot:P0AGJ7,Genbank:NP_418063.1,EcoGene:EG11888,GeneID:948119;Name=NP_418063.1;gbkey=CDS;gene=trmL;product=tRNA Leu mC34%2CmU34 2'-O-methyltransferase%2C SAM-dependent;protein_id=NP_418063.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3781698 3781726 . + . ID=id458;Note=REP273 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3781741 3782562 . - . ID=gene3686;Dbxref=EcoGene:EG10187,GeneID:948126;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;gene_synonym=ECK3597,JW3582;locus_tag=b3607 NC_000913.3 RefSeq CDS 3781741 3782562 . - 0 ID=cds3553;Parent=gene3686;Dbxref=ASAP:ABE-0011793,UniProtKB/Swiss-Prot:P0A9D4,Genbank:NP_418064.1,EcoGene:EG10187,GeneID:948126;Name=NP_418064.1;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=NP_418064.1;transl_table=11 NC_000913.3 RefSeq gene 3782642 3783661 . - . ID=gene3687;Dbxref=EcoGene:EG20091,GeneID:948125;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;gene_synonym=ECK3598,JW3583;locus_tag=b3608 NC_000913.3 RefSeq CDS 3782642 3783661 . - 0 ID=cds3554;Parent=gene3687;Dbxref=ASAP:ABE-0011795,UniProtKB/Swiss-Prot:P0A6S7,Genbank:NP_418065.1,EcoGene:EG20091,GeneID:948125;Name=NP_418065.1;gbkey=CDS;gene=gpsA;product=glycerol-3-phosphate dehydrogenase (NAD+);protein_id=NP_418065.1;transl_table=11 NC_000913.3 RefSeq gene 3783661 3784128 . - . ID=gene3688;Dbxref=EcoGene:EG10937,GeneID:948123;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;gene_synonym=ECK3599,JW3584;locus_tag=b3609 NC_000913.3 RefSeq CDS 3783661 3784128 . - 0 ID=cds3555;Parent=gene3688;Dbxref=ASAP:ABE-0011798,UniProtKB/Swiss-Prot:P0AG86,Genbank:NP_418066.1,EcoGene:EG10937,GeneID:948123;Name=NP_418066.1;Note=protein export%3B molecular chaperone%3B may bind to signel sequence;gbkey=CDS;gene=secB;product=protein export chaperone;protein_id=NP_418066.1;transl_table=11 NC_000913.3 RefSeq gene 3784191 3784442 . - . ID=gene3689;Dbxref=EcoGene:EG12294,GeneID:948132;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;gene_synonym=ECK3600,JW3585,yibM;locus_tag=b3610 NC_000913.3 RefSeq CDS 3784191 3784442 . - 0 ID=cds3556;Parent=gene3689;Dbxref=ASAP:ABE-0011801,UniProtKB/Swiss-Prot:P0AC62,Genbank:NP_418067.1,EcoGene:EG12294,GeneID:948132;Name=NP_418067.1;gbkey=CDS;gene=grxC;product=glutaredoxin 3;protein_id=NP_418067.1;transl_table=11 NC_000913.3 RefSeq gene 3784584 3785015 . - . ID=gene3690;Dbxref=EcoGene:EG12295,GeneID:948131;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;gene_synonym=ECK3601,JW3586;locus_tag=b3611 NC_000913.3 RefSeq CDS 3784584 3785015 . - 0 ID=cds3557;Parent=gene3690;Dbxref=ASAP:ABE-0011805,UniProtKB/Swiss-Prot:P0AG27,Genbank:NP_418068.1,EcoGene:EG12295,GeneID:948131;Name=NP_418068.1;gbkey=CDS;gene=yibN;product=putative rhodanese-related sulfurtransferase;protein_id=NP_418068.1;transl_table=11 NC_000913.3 RefSeq gene 3785260 3786804 . + . ID=gene3691;Dbxref=EcoGene:EG12296,GeneID:948130;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=ECK3602,gpmC,gpmI,JW3587,pgmI,yibO;locus_tag=b3612 NC_000913.3 RefSeq CDS 3785260 3786804 . + 0 ID=cds3558;Parent=gene3691;Dbxref=ASAP:ABE-0011818,UniProtKB/Swiss-Prot:P37689,Genbank:NP_418069.1,EcoGene:EG12296,GeneID:948130;Name=NP_418069.1;Note=putative 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;gbkey=CDS;gene=gpmM;product=phosphoglycero mutase III%2C cofactor-independent;protein_id=NP_418069.1;transl_table=11 NC_000913.3 RefSeq gene 3786838 3788097 . + . ID=gene3692;Dbxref=EcoGene:EG12297,GeneID:948129;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;gene_synonym=ECK3603,JW5646,slm11,yibP;locus_tag=b3613 NC_000913.3 RefSeq CDS 3786838 3788097 . + 0 ID=cds3559;Parent=gene3692;Dbxref=ASAP:ABE-0011820,UniProtKB/Swiss-Prot:P37690,Genbank:NP_418070.6,EcoGene:EG12297,GeneID:948129;Name=NP_418070.6;Note=putative membrane protein;gbkey=CDS;gene=envC;product=activator of AmiB%2CC murein hydrolases%2C septal ring factor;protein_id=NP_418070.6;transl_table=11 NC_000913.3 RefSeq gene 3788101 3789060 . + . ID=gene3693;Dbxref=EcoGene:EG12298,GeneID:948128;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;gene_synonym=ECK3604,JW5645;locus_tag=b3614 NC_000913.3 RefSeq CDS 3788101 3789060 . + 0 ID=cds3560;Parent=gene3693;Dbxref=ASAP:ABE-0011824,UniProtKB/Swiss-Prot:P37691,Genbank:NP_418071.4,EcoGene:EG12298,GeneID:948128;Name=NP_418071.4;gbkey=CDS;gene=yibQ;product=putative polysaccharide deacetylase;protein_id=NP_418071.4;transl_table=11 NC_000913.3 RefSeq gene 3789047 3790081 . - . ID=gene3694;Dbxref=EcoGene:EG11266,GeneID:948140;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;gene_synonym=ECK3605,JW3590,yibD;locus_tag=b3615 NC_000913.3 RefSeq CDS 3789047 3790081 . - 0 ID=cds3561;Parent=gene3694;Dbxref=ASAP:ABE-0011826,UniProtKB/Swiss-Prot:P11290,Genbank:NP_418072.1,EcoGene:EG11266,GeneID:948140;Name=NP_418072.1;Note=putative regulator;gbkey=CDS;gene=waaH;product=LPS(HepIII)-glucuronic acid glycosyltransferase;protein_id=NP_418072.1;transl_table=11 NC_000913.3 RefSeq gene 3790320 3791345 . - . ID=gene3695;Dbxref=EcoGene:EG10993,GeneID:948139;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;gene_synonym=ECK3606,JW3591;locus_tag=b3616 NC_000913.3 RefSeq CDS 3790320 3791345 . - 0 ID=cds3562;Parent=gene3695;Dbxref=ASAP:ABE-0011830,UniProtKB/Swiss-Prot:P07913,Genbank:NP_418073.1,EcoGene:EG10993,GeneID:948139;Name=NP_418073.1;Note=threonine dehydrogenase;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase%2C NAD(P)-binding;protein_id=NP_418073.1;transl_table=11 NC_000913.3 RefSeq gene 3791355 3792551 . - . ID=gene3696;Dbxref=EcoGene:EG10512,GeneID:948138;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;gene_synonym=ECK3607,JW3592;locus_tag=b3617 NC_000913.3 RefSeq CDS 3791355 3792551 . - 0 ID=cds3563;Parent=gene3696;Dbxref=ASAP:ABE-0011832,UniProtKB/Swiss-Prot:P0AB77,Genbank:NP_418074.1,EcoGene:EG10512,GeneID:948138;Name=NP_418074.1;Note=2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase);gbkey=CDS;gene=kbl;product=glycine C-acetyltransferase;protein_id=NP_418074.1;transl_table=11 NC_000913.3 RefSeq gene 3792826 3793683 . - . ID=gene3697;Dbxref=EcoGene:EG11188,GeneID:948137;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;gene_synonym=ECK3608,htrL,JW5644;locus_tag=b3618 NC_000913.3 RefSeq CDS 3792826 3793683 . - 0 ID=cds3564;Parent=gene3697;Dbxref=ASAP:ABE-0011838,UniProtKB/Swiss-Prot:P25666,Genbank:NP_418075.2,EcoGene:EG11188,GeneID:948137;Name=NP_418075.2;Note=involved in lipopolysaccharide biosynthesis;gbkey=CDS;gene=yibB;product=YibB family protein%2C function unknown;protein_id=NP_418075.2;transl_table=11 NC_000913.3 RefSeq gene 3793987 3794919 . + . ID=gene3698;Dbxref=EcoGene:EG10838,GeneID:948134;Name=hldD;gbkey=Gene;gene=hldD;gene_biotype=protein_coding;gene_synonym=ECK3609,gmhD,htrM,JW3594,nbsB,rfaD,waaD;locus_tag=b3619 NC_000913.3 RefSeq CDS 3793987 3794919 . + 0 ID=cds3565;Parent=gene3698;Dbxref=ASAP:ABE-0011843,UniProtKB/Swiss-Prot:P67910,Genbank:NP_418076.1,EcoGene:EG10838,GeneID:948134;Name=NP_418076.1;Note=ADP-L-glycero-D-mannoheptose-6-epimerase;gbkey=CDS;gene=hldD;product=ADP-L-glycero-D-mannoheptose-6-epimerase%2C NAD(P)-binding;protein_id=NP_418076.1;transl_table=11 NC_000913.3 RefSeq gene 3794929 3795975 . + . ID=gene3699;Dbxref=EcoGene:EG12210,GeneID:948135;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;gene_synonym=ECK3610,JW3595,rfaF;locus_tag=b3620 NC_000913.3 RefSeq CDS 3794929 3795975 . + 0 ID=cds3566;Parent=gene3699;Dbxref=ASAP:ABE-0011845,UniProtKB/Swiss-Prot:P37692,Genbank:NP_418077.1,EcoGene:EG12210,GeneID:948135;Name=NP_418077.1;Note=ADP-heptose--lps heptosyltransferase II%3B lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaF;product=ADP-heptose:LPS heptosyltransferase II;protein_id=NP_418077.1;transl_table=11 NC_000913.3 RefSeq gene 3795979 3796938 . + . ID=gene3700;Dbxref=EcoGene:EG11189,GeneID:948136;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;gene_synonym=ECK3611,JW3596,rfaC,yibC;locus_tag=b3621 NC_000913.3 RefSeq CDS 3795979 3796938 . + 0 ID=cds3567;Parent=gene3700;Dbxref=ASAP:ABE-0011847,UniProtKB/Swiss-Prot:P24173,Genbank:NP_418078.1,EcoGene:EG11189,GeneID:948136;Name=NP_418078.1;Note=heptosyl transferase I%3B lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaC;product=ADP-heptose:LPS heptosyl transferase I;protein_id=NP_418078.1;transl_table=11 NC_000913.3 RefSeq gene 3796948 3798207 . + . ID=gene3701;Dbxref=EcoGene:EG11424,GeneID:948148;Name=waaL;gbkey=Gene;gene=waaL;gene_biotype=protein_coding;gene_synonym=ECK3612,JW3597,rfaL;locus_tag=b3622 NC_000913.3 RefSeq CDS 3796948 3798207 . + 0 ID=cds3568;Parent=gene3701;Dbxref=ASAP:ABE-0011849,UniProtKB/Swiss-Prot:P27243,Genbank:NP_418079.1,EcoGene:EG11424,GeneID:948148;Name=NP_418079.1;Note=O-antigen ligase%3B lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaL;product=O-antigen ligase;protein_id=NP_418079.1;transl_table=11 NC_000913.3 RefSeq gene 3798239 3799312 . - . ID=gene3702;Dbxref=EcoGene:EG11423,GeneID:948147;Name=waaU;gbkey=Gene;gene=waaU;gene_biotype=protein_coding;gene_synonym=ECK3613,JW3598,rfaK,waaK;locus_tag=b3623 NC_000913.3 RefSeq CDS 3798239 3799312 . - 0 ID=cds3569;Parent=gene3702;Dbxref=ASAP:ABE-0011851,UniProtKB/Swiss-Prot:P27242,Genbank:NP_418080.1,EcoGene:EG11423,GeneID:948147;Name=NP_418080.1;Note=probably hexose transferase%3B lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaU;product=lipopolysaccharide core biosynthesis;protein_id=NP_418080.1;transl_table=11 NC_000913.3 RefSeq gene 3799345 3800196 . - . ID=gene3703;Dbxref=EcoGene:EG11426,GeneID:948146;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;gene_synonym=ECK3614,JW3599,rfaZ;locus_tag=b3624 NC_000913.3 RefSeq CDS 3799345 3800196 . - 0 ID=cds3570;Parent=gene3703;Dbxref=ASAP:ABE-0011854,UniProtKB/Swiss-Prot:P27241,Genbank:NP_418081.1,EcoGene:EG11426,GeneID:948146;Name=NP_418081.1;Note=lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaZ;product=lipopolysaccharide KdoIII transferase%3B lipopolysaccharide core biosynthesis protein;protein_id=NP_418081.1;transl_table=11 NC_000913.3 RefSeq gene 3800267 3800965 . - . ID=gene3704;Dbxref=EcoGene:EG11425,GeneID:948145;Name=waaY;gbkey=Gene;gene=waaY;gene_biotype=protein_coding;gene_synonym=ECK3615,JW3600,rfaY;locus_tag=b3625 NC_000913.3 RefSeq CDS 3800267 3800965 . - 0 ID=cds3571;Parent=gene3704;Dbxref=ASAP:ABE-0011856,UniProtKB/Swiss-Prot:P27240,Genbank:NP_418082.1,EcoGene:EG11425,GeneID:948145;Name=NP_418082.1;Note=lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaY;product=lipopolysaccharide core biosynthesis protein;protein_id=NP_418082.1;transl_table=11 NC_000913.3 RefSeq gene 3800983 3801999 . - . ID=gene3705;Dbxref=EcoGene:EG11353,GeneID:948142;Name=waaR;gbkey=Gene;gene=waaR;gene_biotype=protein_coding;gene_synonym=ECK3616,JW3601,rfaJ,rfaN,waaJ;locus_tag=b3626 NC_000913.3 RefSeq CDS 3800983 3801999 . - 0 ID=cds3572;Parent=gene3705;Dbxref=ASAP:ABE-0011858,UniProtKB/Swiss-Prot:P27129,Genbank:NP_418083.1,EcoGene:EG11353,GeneID:948142;Name=NP_418083.1;gbkey=CDS;gene=waaR;product=lipopolysaccharide 1%2C2-glucosyltransferase%3B UDP-glucose:(glucosyl)LPS alpha-1%2C2-glucosyltransferase;protein_id=NP_418083.1;transl_table=11 NC_000913.3 RefSeq gene 3802039 3803058 . - . ID=gene3706;Dbxref=EcoGene:EG11352,GeneID:948143;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=ECK3617,JW3602,rfaI,rfaM,waaI;locus_tag=b3627 NC_000913.3 RefSeq CDS 3802039 3803058 . - 0 ID=cds3573;Parent=gene3706;Dbxref=ASAP:ABE-0011860,UniProtKB/Swiss-Prot:P27128,Genbank:NP_418084.1,EcoGene:EG11352,GeneID:948143;Name=NP_418084.1;Note=UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1%2C3-D-galactosyltransferase;gbkey=CDS;gene=waaO;product=UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1%2C3-D-galactosyltransferase;protein_id=NP_418084.1;transl_table=11 NC_000913.3 RefSeq gene 3803058 3804137 . - . ID=gene3707;Dbxref=EcoGene:EG11351,GeneID:948144;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=ECK3618,JW3603,lps,phx*,rfaB,syn*;locus_tag=b3628 NC_000913.3 RefSeq CDS 3803058 3804137 . - 0 ID=cds3574;Parent=gene3707;Dbxref=ASAP:ABE-0011862,UniProtKB/Swiss-Prot:P27127,Genbank:NP_418085.2,EcoGene:EG11351,GeneID:948144;Name=NP_418085.2;gbkey=CDS;gene=waaB;product=lipopolysaccharide 1%2C6-galactosyltransferase%3B UDP-D-galactose:(glucosyl)lipopolysaccharide-1%2C6-D-galactosyltransferase;protein_id=NP_418085.2;transl_table=11 NC_000913.3 RefSeq gene 3804181 3805116 . - . ID=gene3708;Dbxref=EcoGene:EG11350,GeneID:948151;Name=waaS;gbkey=Gene;gene=waaS;gene_biotype=protein_coding;gene_synonym=ECK3619,JW3604,rfaS;locus_tag=b3629 NC_000913.3 RefSeq CDS 3804181 3805116 . - 0 ID=cds3575;Parent=gene3708;Dbxref=ASAP:ABE-0011864,UniProtKB/Swiss-Prot:P27126,Genbank:NP_418086.1,EcoGene:EG11350,GeneID:948151;Name=NP_418086.1;Note=lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaS;product=lipopolysaccharide rhamnose:KdoIII transferase%3B lipopolysaccharide core biosynthesis protein;protein_id=NP_418086.1;transl_table=11 NC_000913.3 RefSeq gene 3805153 3805950 . - . ID=gene3709;Dbxref=EcoGene:EG11340,GeneID:948150;Name=waaP;gbkey=Gene;gene=waaP;gene_biotype=protein_coding;gene_synonym=ECK3620,JW3605,rfaP;locus_tag=b3630 NC_000913.3 RefSeq CDS 3805153 3805950 . - 0 ID=cds3576;Parent=gene3709;Dbxref=ASAP:ABE-0011866,UniProtKB/Swiss-Prot:P25741,Genbank:NP_418087.1,EcoGene:EG11340,GeneID:948150;Name=NP_418087.1;Note=lipopolysaccharide core biosynthesis%3B phosphorylation of core heptose%3B attaches phosphate-containing substrate to LPS co;gbkey=CDS;gene=waaP;product=kinase that phosphorylates core heptose of lipopolysaccharide;protein_id=NP_418087.1;transl_table=11 NC_000913.3 RefSeq gene 3805943 3807067 . - . ID=gene3710;Dbxref=EcoGene:EG11339,GeneID:948149;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;gene_synonym=ECK3621,JW3606,rfaG;locus_tag=b3631 NC_000913.3 RefSeq CDS 3805943 3807067 . - 0 ID=cds3577;Parent=gene3710;Dbxref=ASAP:ABE-0011868,UniProtKB/Swiss-Prot:P25740,Genbank:NP_418088.1,EcoGene:EG11339,GeneID:948149;Name=NP_418088.1;Note=glucosyltransferase I%3B lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaG;product=UDP-glucose:(heptosyl)lipopolysaccharide alpha-1%2C3-glucosyltransferase%3B lipopolysaccharide core biosynthesis protein%3B lipopolysaccharide glucosyltransferase I;protein_id=NP_418088.1;transl_table=11 NC_000913.3 RefSeq gene 3807064 3808098 . - . ID=gene3711;Dbxref=EcoGene:EG11341,GeneID:948155;Name=waaQ;gbkey=Gene;gene=waaQ;gene_biotype=protein_coding;gene_synonym=ECK3622,JW3607,rfaQ;locus_tag=b3632 NC_000913.3 RefSeq CDS 3807064 3808098 . - 0 ID=cds3578;Parent=gene3711;Dbxref=ASAP:ABE-0011870,UniProtKB/Swiss-Prot:P25742,Genbank:NP_418089.1,EcoGene:EG11341,GeneID:948155;Name=NP_418089.1;Note=lipopolysaccharide core biosynthesis;gbkey=CDS;gene=waaQ;product=lipopolysaccharide core biosynthesis protein;protein_id=NP_418089.1;transl_table=11 NC_000913.3 RefSeq gene 3808540 3809817 . + . ID=gene3712;Dbxref=EcoGene:EG10520,GeneID:949048;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;gene_synonym=ECK3623,JW3608,kdtA;locus_tag=b3633 NC_000913.3 RefSeq CDS 3808540 3809817 . + 0 ID=cds3579;Parent=gene3712;Dbxref=ASAP:ABE-0011873,UniProtKB/Swiss-Prot:P0AC75,Genbank:NP_418090.1,EcoGene:EG10520,GeneID:949048;Name=NP_418090.1;gbkey=CDS;gene=waaA;product=3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase);protein_id=NP_418090.1;transl_table=11 NC_000913.3 RefSeq gene 3809825 3810304 . + . ID=gene3713;Dbxref=EcoGene:EG11190,GeneID:947386;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;gene_synonym=ECK3624,JW3609,kdtB,yicA;locus_tag=b3634 NC_000913.3 RefSeq CDS 3809825 3810304 . + 0 ID=cds3580;Parent=gene3713;Dbxref=ASAP:ABE-0011875,UniProtKB/Swiss-Prot:P0A6I6,Genbank:NP_418091.1,EcoGene:EG11190,GeneID:947386;Name=NP_418091.1;gbkey=CDS;gene=coaD;product=pantetheine-phosphate adenylyltransferase;protein_id=NP_418091.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3810312 3810333 . + . ID=id459;Note=REP274 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3810343 3811152 . - . ID=gene3714;Dbxref=EcoGene:EG10329,GeneID:946765;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;gene_synonym=ECK3625,fpg,JW3610;locus_tag=b3635 NC_000913.3 RefSeq CDS 3810343 3811152 . - 0 ID=cds3581;Parent=gene3714;Dbxref=ASAP:ABE-0011877,UniProtKB/Swiss-Prot:P05523,Genbank:NP_418092.1,EcoGene:EG10329,GeneID:946765;Name=NP_418092.1;Note=formamidopyrimidine DNA glycosylase;gbkey=CDS;gene=mutM;product=formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase;protein_id=NP_418092.1;transl_table=11 NC_000913.3 RefSeq gene 3811250 3811417 . - . ID=gene3715;Dbxref=EcoGene:EG10891,GeneID:946318;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;gene_synonym=ECK3626,JW3611;locus_tag=b3636 NC_000913.3 RefSeq CDS 3811250 3811417 . - 0 ID=cds3582;Parent=gene3715;Dbxref=ASAP:ABE-0011883,UniProtKB/Swiss-Prot:P0A7N9,Genbank:NP_418093.1,EcoGene:EG10891,GeneID:946318;Name=NP_418093.1;gbkey=CDS;gene=rpmG;product=50S ribosomal subunit protein L33;protein_id=NP_418093.1;transl_table=11 NC_000913.3 RefSeq gene 3811438 3811674 . - . ID=gene3716;Dbxref=EcoGene:EG10886,GeneID:946941;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;gene_synonym=ECK3627,JW3612;locus_tag=b3637 NC_000913.3 RefSeq CDS 3811438 3811674 . - 0 ID=cds3583;Parent=gene3716;Dbxref=ASAP:ABE-0011885,UniProtKB/Swiss-Prot:P0A7M2,Genbank:NP_418094.1,EcoGene:EG10886,GeneID:946941;Name=NP_418094.1;gbkey=CDS;gene=rpmB;product=50S ribosomal subunit protein L28;protein_id=NP_418094.1;transl_table=11 NC_000913.3 RefSeq gene 3811891 3812559 . - . ID=gene3717;Dbxref=EcoGene:EG11312,GeneID:948968;Name=yicR;gbkey=Gene;gene=yicR;gene_biotype=protein_coding;gene_synonym=ECK3628,JW5643,radC;locus_tag=b3638 NC_000913.3 RefSeq CDS 3811891 3812559 . - 0 ID=cds3584;Parent=gene3717;Dbxref=ASAP:ABE-0011889,UniProtKB/Swiss-Prot:P25531,Genbank:NP_418095.4,EcoGene:EG11312,GeneID:948968;Name=NP_418095.4;Note=DNA repair protein;gbkey=CDS;gene=yicR;product=UPF0758 family protein;protein_id=NP_418095.4;transl_table=11 NC_000913.3 RefSeq gene 3812731 3813951 . + . ID=gene3718;Dbxref=EcoGene:EG10004,GeneID:949047;Name=dfp;gbkey=Gene;gene=dfp;gene_biotype=protein_coding;gene_synonym=coaBC,ECK3629,JW5642;locus_tag=b3639 NC_000913.3 RefSeq CDS 3812731 3813951 . + 0 ID=cds3585;Parent=gene3718;Dbxref=ASAP:ABE-0011896,UniProtKB/Swiss-Prot:P0ABQ0,Genbank:NP_418096.4,EcoGene:EG10004,GeneID:949047;Name=NP_418096.4;Note=flavoprotein affecting synthesis of DNA and pantothenate metabolism;gbkey=CDS;gene=dfp;product=fused 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase%2C FMN-binding;protein_id=NP_418096.4;transl_table=11 NC_000913.3 RefSeq gene 3813932 3814387 . + . ID=gene3719;Dbxref=EcoGene:EG10251,GeneID:948607;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;gene_synonym=dnaS,ECK3630,JW3615,sof;locus_tag=b3640 NC_000913.3 RefSeq CDS 3813932 3814387 . + 0 ID=cds3586;Parent=gene3719;Dbxref=ASAP:ABE-0011899,UniProtKB/Swiss-Prot:P06968,Genbank:NP_418097.1,EcoGene:EG10251,GeneID:948607;Name=NP_418097.1;gbkey=CDS;gene=dut;product=deoxyuridinetriphosphatase;protein_id=NP_418097.1;transl_table=11 NC_000913.3 RefSeq gene 3814494 3815090 . + . ID=gene3720;Dbxref=EcoGene:EG11191,GeneID:948158;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ECK3631,JW5641,ttk,yicB;locus_tag=b3641 NC_000913.3 RefSeq CDS 3814494 3815090 . + 0 ID=cds3587;Parent=gene3720;Dbxref=ASAP:ABE-0011902,UniProtKB/Swiss-Prot:P0C093,Genbank:NP_418098.4,EcoGene:EG11191,GeneID:948158;Name=NP_418098.4;Note=putative transcriptional regulator;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor%2C anti-FtsZ division inhibitor;protein_id=NP_418098.4;transl_table=11 NC_000913.3 RefSeq repeat_region 3815097 3815118 . + . ID=id460;Note=REP275 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3815127 3815768 . - . ID=gene3721;Dbxref=EcoGene:EG10808,GeneID:948157;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;gene_synonym=ECK3632,JW3617;locus_tag=b3642 NC_000913.3 RefSeq CDS 3815127 3815768 . - 0 ID=cds3588;Parent=gene3721;Dbxref=ASAP:ABE-0011904,UniProtKB/Swiss-Prot:P0A7E3,Genbank:NP_418099.1,EcoGene:EG10808,GeneID:948157;Name=NP_418099.1;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=NP_418099.1;transl_table=11 NC_000913.3 RefSeq gene 3815834 3816549 . - . ID=gene3722;Dbxref=EcoGene:EG10863,GeneID:948156;Name=rph;gbkey=Gene;gene=rph;gene_biotype=pseudogene;gene_synonym=ECK3633,JW3618,orfE;locus_tag=b3643;pseudo=true NC_000913.3 RefSeq CDS 3815881 3816549 . - 0 ID=cds3589;Parent=gene3722;Dbxref=ASAP:ABE-0011909,UniProtKB/Swiss-Prot:P0CG19,EcoGene:EG10863,GeneID:948156;Note=ribonuclease PH (defective)%3Benzyme%3B Degradation of RNA~RNase PH;gbkey=CDS;gene=rph;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3815834 3815881 . - 0 ID=cds3589;Parent=gene3722;Dbxref=ASAP:ABE-0011909,UniProtKB/Swiss-Prot:P0CG19,EcoGene:EG10863,GeneID:948156;Note=ribonuclease PH (defective)%3Benzyme%3B Degradation of RNA~RNase PH;gbkey=CDS;gene=rph;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3816676 3817539 . + . ID=gene3723;Dbxref=EcoGene:EG11192,GeneID:948154;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;gene_synonym=ECK3634,JW3619,orfX;locus_tag=b3644 NC_000913.3 RefSeq CDS 3816676 3817539 . + 0 ID=cds3590;Parent=gene3723;Dbxref=ASAP:ABE-0011913,UniProtKB/Swiss-Prot:P23839,Genbank:NP_418101.1,EcoGene:EG11192,GeneID:948154;Name=NP_418101.1;Note=putative alpha helix protein;gbkey=CDS;gene=yicC;product=UPF0701 family protein;protein_id=NP_418101.1;transl_table=11 NC_000913.3 RefSeq gene 3817760 3818584 . + . ID=gene3724;Dbxref=EcoGene:EG11193,GeneID:948153;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;gene_synonym=ECK3635,JW3620,orfY,pcsA,yicD;locus_tag=b3645 NC_000913.3 RefSeq CDS 3817760 3818584 . + 0 ID=cds3591;Parent=gene3724;Dbxref=ASAP:ABE-0011918,UniProtKB/Swiss-Prot:P23840,Genbank:NP_418102.2,EcoGene:EG11193,GeneID:948153;Name=NP_418102.2;gbkey=CDS;gene=dinD;product=DNA damage-inducible protein;protein_id=NP_418102.2;transl_table=11 NC_000913.3 RefSeq gene 3818874 3819491 . + . ID=gene3725;Dbxref=EcoGene:EG11683,GeneID:948165;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;gene_synonym=ECK3636,JW3621;locus_tag=b3646 NC_000913.3 RefSeq CDS 3818874 3819491 . + 0 ID=cds3592;Parent=gene3725;Dbxref=ASAP:ABE-0011921,UniProtKB/Swiss-Prot:P0AGM2,Genbank:NP_418103.4,EcoGene:EG11683,GeneID:948165;Name=NP_418103.4;gbkey=CDS;gene=yicG;product=UPF0126 family inner membrane protein;protein_id=NP_418103.4;transl_table=11 NC_000913.3 RefSeq gene 3819488 3821170 . - . ID=gene3726;Dbxref=EcoGene:EG11334,GeneID:948164;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=ECK3637,JW3622,yicF;locus_tag=b3647 NC_000913.3 RefSeq CDS 3819488 3821170 . - 0 ID=cds3593;Parent=gene3726;Dbxref=ASAP:ABE-0011923,UniProtKB/Swiss-Prot:P25772,Genbank:NP_418104.2,EcoGene:EG11334,GeneID:948164;Name=NP_418104.2;Note=putative enzyme;gbkey=CDS;gene=ligB;product=DNA ligase%2C NAD(+)-dependent;protein_id=NP_418104.2;transl_table=11 NC_000913.3 RefSeq gene 3821428 3822051 . + . ID=gene3727;Dbxref=EcoGene:EG10965,GeneID:948163;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;gene_synonym=ECK3638,JW3623,spoR;locus_tag=b3648 NC_000913.3 RefSeq CDS 3821428 3822051 . + 0 ID=cds3594;Parent=gene3727;Dbxref=ASAP:ABE-0011930,UniProtKB/Swiss-Prot:P60546,Genbank:NP_418105.1,EcoGene:EG10965,GeneID:948163;Name=NP_418105.1;gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=NP_418105.1;transl_table=11 NC_000913.3 RefSeq gene 3822106 3822381 . + . ID=gene3728;Dbxref=EcoGene:EG10899,GeneID:948160;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;gene_synonym=ECK3639,JW3624,spoS;locus_tag=b3649 NC_000913.3 RefSeq CDS 3822106 3822381 . + 0 ID=cds3595;Parent=gene3728;Dbxref=ASAP:ABE-0011933,UniProtKB/Swiss-Prot:P0A800,Genbank:NP_418106.1,EcoGene:EG10899,GeneID:948160;Name=NP_418106.1;gbkey=CDS;gene=rpoZ;product=RNA polymerase%2C omega subunit;protein_id=NP_418106.1;transl_table=11 NC_000913.3 RefSeq gene 3822400 3824508 . + . ID=gene3729;Dbxref=EcoGene:EG10966,GeneID:948159;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;gene_synonym=ECK3640,JW3625;locus_tag=b3650 NC_000913.3 RefSeq CDS 3822400 3824508 . + 0 ID=cds3596;Parent=gene3729;Dbxref=ASAP:ABE-0011935,UniProtKB/Swiss-Prot:P0AG24,Genbank:NP_418107.1,EcoGene:EG10966,GeneID:948159;Name=NP_418107.1;Note=(p)ppGpp synthetase II%3B also guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;gbkey=CDS;gene=spoT;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=NP_418107.1;transl_table=11 NC_000913.3 RefSeq gene 3824515 3825204 . + . ID=gene3730;Dbxref=EcoGene:EG10967,GeneID:948161;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;gene_synonym=ECK3641,JW3626,spoU;locus_tag=b3651 NC_000913.3 RefSeq CDS 3824515 3825204 . + 0 ID=cds3597;Parent=gene3730;Dbxref=ASAP:ABE-0011937,UniProtKB/Swiss-Prot:P0AGJ2,Genbank:NP_418108.1,EcoGene:EG10967,GeneID:948161;Name=NP_418108.1;gbkey=CDS;gene=trmH;product=tRNA mG18-2'-O-methyltransferase%2C SAM-dependent;protein_id=NP_418108.1;transl_table=11 NC_000913.3 RefSeq gene 3825210 3827291 . + . ID=gene3731;Dbxref=EcoGene:EG10829,GeneID:948162;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;gene_synonym=ECK3642,JW3627,radC,spoV;locus_tag=b3652 NC_000913.3 RefSeq CDS 3825210 3827291 . + 0 ID=cds3598;Parent=gene3731;Dbxref=ASAP:ABE-0011939,UniProtKB/Swiss-Prot:P24230,Genbank:NP_418109.1,EcoGene:EG10829,GeneID:948162;Name=NP_418109.1;Note=DNA helicase%2C resolution of Holliday junctions%2C branch migration;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase;protein_id=NP_418109.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3827338 3827416 . + . ID=id461;Note=RIP276 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3827460 3828665 . - . ID=gene3732;Dbxref=EcoGene:EG10406,GeneID:948166;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;gene_synonym=ECK3643,gltC,JW3628;locus_tag=b3653 NC_000913.3 RefSeq CDS 3827460 3828665 . - 0 ID=cds3599;Parent=gene3732;Dbxref=ASAP:ABE-0011941,UniProtKB/Swiss-Prot:P0AER8,Genbank:NP_418110.1,EcoGene:EG10406,GeneID:948166;Name=NP_418110.1;Note=glutamate transport;gbkey=CDS;gene=gltS;product=glutamate transporter;protein_id=NP_418110.1;transl_table=11 NC_000913.3 RefSeq gene 3828945 3830336 . + . ID=gene3733;Dbxref=EcoGene:EG11194,GeneID:948172;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;gene_synonym=ECK3644,JW3629,yicE;locus_tag=b3654 NC_000913.3 RefSeq CDS 3828945 3830336 . + 0 ID=cds3600;Parent=gene3733;Dbxref=ASAP:ABE-0011946,UniProtKB/Swiss-Prot:P0AGM9,Genbank:NP_418111.1,EcoGene:EG11194,GeneID:948172;Name=NP_418111.1;Note=putative transport protein;gbkey=CDS;gene=xanP;product=xanthine permease;protein_id=NP_418111.1;transl_table=11 NC_000913.3 RefSeq gene 3830457 3832166 . + . ID=gene3734;Dbxref=EcoGene:EG11684,GeneID:948171;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;gene_synonym=ECK3645,JW3630;locus_tag=b3655 NC_000913.3 RefSeq CDS 3830457 3832166 . + 0 ID=cds3601;Parent=gene3734;Dbxref=ASAP:ABE-0011949,UniProtKB/Swiss-Prot:P31433,Genbank:NP_418112.1,EcoGene:EG11684,GeneID:948171;Name=NP_418112.1;gbkey=CDS;gene=yicH;product=putative inner membrane-anchored periplasmic AsmA family protein;protein_id=NP_418112.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3832178 3832204 . + . ID=id462;Note=REP277 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3832219 3834537 . - . ID=gene3735;Dbxref=EcoGene:EG11685,GeneID:948169;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;gene_synonym=ECK3646,JW3631;locus_tag=b3656 NC_000913.3 RefSeq CDS 3832219 3834537 . - 0 ID=cds3602;Parent=gene3735;Dbxref=ASAP:ABE-0011951,UniProtKB/Swiss-Prot:P31434,Genbank:NP_418113.1,EcoGene:EG11685,GeneID:948169;Name=NP_418113.1;gbkey=CDS;gene=yicI;product=putative alpha-glucosidase;protein_id=NP_418113.1;transl_table=11 NC_000913.3 RefSeq gene 3834547 3835929 . - . ID=gene3736;Dbxref=EcoGene:EG11686,GeneID:948168;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;gene_synonym=ECK3647,JW5939;locus_tag=b3657 NC_000913.3 RefSeq CDS 3834547 3835929 . - 0 ID=cds3603;Parent=gene3736;Dbxref=ASAP:ABE-0011953,UniProtKB/Swiss-Prot:P31435,Genbank:NP_418114.4,EcoGene:EG11686,GeneID:948168;Name=NP_418114.4;Note=putative permease;gbkey=CDS;gene=yicJ;product=putative transporter;protein_id=NP_418114.4;transl_table=11 NC_000913.3 RefSeq gene 3836222 3836316 . + . ID=gene3737;Dbxref=EcoGene:EG30092,GeneID:948167;Name=selC;gbkey=Gene;gene=selC;gene_biotype=tRNA;gene_synonym=ECK3648,fdhC,JWR0081;locus_tag=b3658 NC_000913.3 RefSeq tRNA 3836222 3836316 . + . ID=rna132;Parent=gene3737;Dbxref=ASAP:ABE-0011956,EcoGene:EG30092,GeneID:948167;gbkey=tRNA;gene=selC;product=tRNA-Sec NC_000913.3 RefSeq exon 3836222 3836316 . + . ID=id463;Parent=rna132;Dbxref=ASAP:ABE-0011956,EcoGene:EG30092,GeneID:948167;gbkey=tRNA;gene=selC;product=tRNA-Sec NC_000913.3 RefSeq gene 3836425 3836556 . + . ID=gene3738;Dbxref=EcoGene:EG14448,GeneID:5625579;Name=yicT;gbkey=Gene;gene=yicT;gene_biotype=pseudogene;gene_synonym=ECK4456,erhM,rhuM;locus_tag=b4653;pseudo=true NC_000913.3 RefSeq CDS 3836425 3836556 . + 0 ID=cds3604;Parent=gene3738;Dbxref=EcoGene:EG14448,GeneID:5625579;Note=pseudogene;gbkey=CDS;gene=yicT;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3836953 3838137 . + . ID=gene3739;Dbxref=EcoGene:EG11687,GeneID:948177;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;gene_synonym=ECK3649,JW3633,yicK;locus_tag=b3659 NC_000913.3 RefSeq CDS 3836953 3838137 . + 0 ID=cds3605;Parent=gene3739;Dbxref=ASAP:ABE-0011959,UniProtKB/Swiss-Prot:P31436,Genbank:NP_418115.1,EcoGene:EG11687,GeneID:948177;Name=NP_418115.1;Note=two-module transport protein;gbkey=CDS;gene=setC;product=putative arabinose efflux transporter;protein_id=NP_418115.1;transl_table=11 NC_000913.3 RefSeq gene 3838248 3839171 . + . ID=gene3740;Dbxref=EcoGene:EG11688,GeneID:948176;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;gene_synonym=ECK3650,JW3634;locus_tag=b3660 NC_000913.3 RefSeq CDS 3838248 3839171 . + 0 ID=cds3606;Parent=gene3740;Dbxref=ASAP:ABE-0011962,UniProtKB/Swiss-Prot:P31437,Genbank:NP_418116.1,EcoGene:EG11688,GeneID:948176;Name=NP_418116.1;Note=putative permease transporter;gbkey=CDS;gene=yicL;product=EamA family inner membrane putative transporter;protein_id=NP_418116.1;transl_table=11 NC_000913.3 RefSeq gene 3839175 3839993 . - . ID=gene3741;Dbxref=EcoGene:EG10657,GeneID:948175;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;gene_synonym=ECK3651,JW3635;locus_tag=b3661 NC_000913.3 RefSeq CDS 3839175 3839993 . - 0 ID=cds3607;Parent=gene3741;Dbxref=ASAP:ABE-0011964,UniProtKB/Swiss-Prot:P04846,Genbank:NP_418117.1,EcoGene:EG10657,GeneID:948175;Name=NP_418117.1;Note=lipoprotein-28;gbkey=CDS;gene=nlpA;product=cytoplasmic membrane lipoprotein-28;protein_id=NP_418117.1;transl_table=11 NC_000913.3 RefSeq gene 3840215 3840508 . + . ID=gene3742;Dbxref=EcoGene:EG14429,GeneID:1450300;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;gene_synonym=ECK3652,JW5965;locus_tag=b4555 NC_000913.3 RefSeq CDS 3840215 3840508 . + 0 ID=cds3608;Parent=gene3742;Dbxref=ASAP:ABE-0285076,UniProtKB/Swiss-Prot:Q2M7X4,Genbank:YP_588471.1,EcoGene:EG14429,GeneID:1450300;Name=YP_588471.1;gbkey=CDS;gene=yicS;product=putative periplasmic protein;protein_id=YP_588471.1;transl_table=11 NC_000913.3 RefSeq gene 3840549 3841739 . - . ID=gene3743;Dbxref=EcoGene:EG11689,GeneID:948213;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;gene_synonym=ECK3653,gaiA,JW5938,yicM;locus_tag=b3662 NC_000913.3 RefSeq CDS 3840549 3841739 . - 0 ID=cds3609;Parent=gene3743;Dbxref=ASAP:ABE-0011967,UniProtKB/Swiss-Prot:P0ADL1,Genbank:NP_418118.2,EcoGene:EG11689,GeneID:948213;Name=NP_418118.2;Note=putative transport protein;gbkey=CDS;gene=nepI;product=putative transporter;protein_id=NP_418118.2;transl_table=11 NC_000913.3 RefSeq repeat_region 3841876 3841944 . + . ID=id464;Note=REP278 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3841950 3842402 . - . ID=gene3744;Dbxref=EcoGene:EG11690,GeneID:948173;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;gene_synonym=ECK3654,JW5637;locus_tag=b3663 NC_000913.3 RefSeq CDS 3841950 3842402 . - 0 ID=cds3610;Parent=gene3744;Dbxref=ASAP:ABE-0011972,UniProtKB/Swiss-Prot:P0ADL3,Genbank:NP_418119.2,EcoGene:EG11690,GeneID:948173;Name=NP_418119.2;gbkey=CDS;gene=yicN;product=DUF1198 family protein;protein_id=NP_418119.2;transl_table=11 NC_000913.3 RefSeq gene 3842455 3843789 . - . ID=gene3745;Dbxref=EcoGene:EG11691,GeneID:948174;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=ECK3655,JW5636,pbuA,yicO;locus_tag=b3664 NC_000913.3 RefSeq CDS 3842455 3843789 . - 0 ID=cds3611;Parent=gene3745;Dbxref=ASAP:ABE-0011975,UniProtKB/Swiss-Prot:P31440,Genbank:NP_418120.2,EcoGene:EG11691,GeneID:948174;Name=NP_418120.2;gbkey=CDS;gene=adeQ;product=adenine permease%2C high affinity%3B adenine:H+ symporter;protein_id=NP_418120.2;transl_table=11 NC_000913.3 RefSeq gene 3843964 3845730 . + . ID=gene3746;Dbxref=EcoGene:EG11692,GeneID:948210;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;gene_synonym=ade,adeC,adu,ECK3656,JW3640,yicP;locus_tag=b3665 NC_000913.3 RefSeq CDS 3843964 3845730 . + 0 ID=cds3612;Parent=gene3746;Dbxref=ASAP:ABE-0011979,UniProtKB/Swiss-Prot:P31441,Genbank:NP_418121.1,EcoGene:EG11692,GeneID:948210;Name=NP_418121.1;gbkey=CDS;gene=adeD;product=cryptic adenine deaminase;protein_id=NP_418121.1;transl_table=11 NC_000913.3 RefSeq gene 3845776 3847167 . - . ID=gene3747;Dbxref=EcoGene:EG11054,GeneID:948201;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;gene_synonym=ECK3657,JW3641;locus_tag=b3666 NC_000913.3 RefSeq CDS 3845776 3847167 . - 0 ID=cds3613;Parent=gene3747;Dbxref=ASAP:ABE-0011981,UniProtKB/Swiss-Prot:P0AGC0,Genbank:NP_418122.1,EcoGene:EG11054,GeneID:948201;Name=NP_418122.1;Note=hexose phosphate transport protein;gbkey=CDS;gene=uhpT;product=hexose phosphate transporter;protein_id=NP_418122.1;transl_table=11 NC_000913.3 RefSeq gene 3847305 3848624 . - . ID=gene3748;Dbxref=EcoGene:EG11053,GeneID:948184;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;gene_synonym=ECK3658,JW3642;locus_tag=b3667 NC_000913.3 RefSeq CDS 3847305 3848624 . - 0 ID=cds3614;Parent=gene3748;Dbxref=ASAP:ABE-0011990,UniProtKB/Swiss-Prot:P09836,Genbank:NP_418123.2,EcoGene:EG11053,GeneID:948184;Name=NP_418123.2;Note=regulator of uhpT;gbkey=CDS;gene=uhpC;product=membrane protein regulates uhpT expression;protein_id=NP_418123.2;transl_table=11 NC_000913.3 RefSeq gene 3848634 3850136 . - . ID=gene3749;Dbxref=EcoGene:EG11052,GeneID:948195;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;gene_synonym=ECK3659,JW3643;locus_tag=b3668 NC_000913.3 RefSeq CDS 3848634 3850136 . - 0 ID=cds3615;Parent=gene3749;Dbxref=ASAP:ABE-0011993,UniProtKB/Swiss-Prot:P09835,Genbank:NP_418124.4,EcoGene:EG11052,GeneID:948195;Name=NP_418124.4;Note=sensor histidine protein kinase phosphorylates UhpA;gbkey=CDS;gene=uhpB;product=sensory histidine kinase in two-component regulatory sytem with UhpA;protein_id=NP_418124.4;transl_table=11 NC_000913.3 RefSeq gene 3850136 3850726 . - . ID=gene3750;Dbxref=EcoGene:EG11051,GeneID:948178;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;gene_synonym=ECK3660,JW3644;locus_tag=b3669 NC_000913.3 RefSeq CDS 3850136 3850726 . - 0 ID=cds3616;Parent=gene3750;Dbxref=ASAP:ABE-0011995,UniProtKB/Swiss-Prot:P0AGA6,Genbank:NP_418125.1,EcoGene:EG11051,GeneID:948178;Name=NP_418125.1;Note=response regulator%2C positive activator of uhpT transcription (sensor%2C uhpB);gbkey=CDS;gene=uhpA;product=response regulator in two-component regulatory system wtih UhpB;protein_id=NP_418125.1;transl_table=11 NC_000913.3 RefSeq gene 3850802 3851092 . - . ID=gene3751;Dbxref=EcoGene:EG10502,GeneID:948183;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;gene_synonym=ECK3661,JW3645;locus_tag=b3670 NC_000913.3 RefSeq CDS 3850802 3851092 . - 0 ID=cds3617;Parent=gene3751;Dbxref=ASAP:ABE-0011997,UniProtKB/Swiss-Prot:P0ADF8,Genbank:NP_418126.1,EcoGene:EG10502,GeneID:948183;Name=NP_418126.1;Note=acetolactate synthase I%2C valine sensitive%2C small subunit;gbkey=CDS;gene=ilvN;product=acetolactate synthase 1 small subunit;protein_id=NP_418126.1;transl_table=11 NC_000913.3 RefSeq gene 3851096 3852784 . - . ID=gene3752;Dbxref=EcoGene:EG10494,GeneID:948182;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;gene_synonym=ECK3662,JW3646;locus_tag=b3671 NC_000913.3 RefSeq CDS 3851096 3852784 . - 0 ID=cds3618;Parent=gene3752;Dbxref=ASAP:ABE-0011999,UniProtKB/Swiss-Prot:P08142,Genbank:NP_418127.1,EcoGene:EG10494,GeneID:948182;Name=NP_418127.1;Note=acetolactate synthase I%2Cvaline-sensitive%2C large subunit;gbkey=CDS;gene=ilvB;product=acetolactate synthase 2 large subunit;protein_id=NP_418127.1;transl_table=11 NC_000913.3 RefSeq gene 3852890 3852988 . - . ID=gene3753;Dbxref=EcoGene:EG11275,GeneID:948181;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;gene_synonym=ECK3663,JW3647;locus_tag=b3672 NC_000913.3 RefSeq CDS 3852890 3852988 . - 0 ID=cds3619;Parent=gene3753;Dbxref=ASAP:ABE-0012002,UniProtKB/Swiss-Prot:P03061,Genbank:NP_418128.1,EcoGene:EG11275,GeneID:948181;Name=NP_418128.1;gbkey=CDS;gene=ivbL;product=ilvB operon leader peptide;protein_id=NP_418128.1;transl_table=11 NC_000913.3 RefSeq gene 3853118 3853257 . - . ID=gene3754;Dbxref=EcoGene:EG31167,GeneID:5061525;Name=istR;gbkey=Gene;gene=istR;gene_biotype=antisense_RNA;gene_synonym=ECK4425,psr19,psrA19;locus_tag=b4616 NC_000913.3 RefSeq ncRNA 3853118 3853257 . - . ID=rna133;Parent=gene3754;Dbxref=EcoGene:EG31167,GeneID:5061525;gbkey=ncRNA;gene=istR;ncrna_class=antisense_RNA;product=sRNA antisense regulators IstR-1 and IstR-2%2C affectr tisB%2C Hfq-dependent NC_000913.3 RefSeq exon 3853118 3853257 . - . ID=id465;Parent=rna133;Dbxref=EcoGene:EG31167,GeneID:5061525;gbkey=ncRNA;gene=istR;ncrna_class=antisense_RNA;product=sRNA antisense regulators IstR-1 and IstR-2%2C affectr tisB%2C Hfq-dependent NC_000913.3 RefSeq gene 3853553 3853642 . + . ID=gene3755;Dbxref=EcoGene:EG14402,GeneID:5061527;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;gene_synonym=ECK4427,ysdA,ysdB;locus_tag=b4618 NC_000913.3 RefSeq CDS 3853553 3853642 . + 0 ID=cds3620;Parent=gene3755;Dbxref=UniProtKB/Swiss-Prot:A5A627,Genbank:YP_001165331.1,EcoGene:EG14402,GeneID:5061527;Name=YP_001165331.1;gbkey=CDS;gene=tisB;product=toxic membrane persister formation peptide%2C LexA-regulated;protein_id=YP_001165331.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3853712 3853747 . + . ID=id466;Note=REP279 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3853922 3855106 . + . ID=gene3756;Dbxref=EcoGene:EG11693,GeneID:948180;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;gene_synonym=ECK3664,JW5634,yicQ;locus_tag=b3673 NC_000913.3 RefSeq CDS 3853922 3855106 . + 0 ID=cds3621;Parent=gene3756;Dbxref=ASAP:ABE-0012011,UniProtKB/Swiss-Prot:P31442,Genbank:NP_418129.2,EcoGene:EG11693,GeneID:948180;Name=NP_418129.2;Note=2-module integral membrane pump%3B multidrug resistance;gbkey=CDS;gene=emrD;product=multidrug efflux system protein;protein_id=NP_418129.2;transl_table=11 NC_000913.3 RefSeq gene 3855114 3855611 . - . ID=gene3757;Dbxref=EcoGene:EG11694,GeneID:948179;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;gene_synonym=ECK3665,JW3650;locus_tag=b3674 NC_000913.3 RefSeq CDS 3855114 3855611 . - 0 ID=cds3622;Parent=gene3757;Dbxref=ASAP:ABE-0012013,UniProtKB/Swiss-Prot:P31443,Genbank:NP_418130.1,EcoGene:EG11694,GeneID:948179;Name=NP_418130.1;Note=putative transcriptional regulator;gbkey=CDS;gene=yidF;product=putative Cys-type oxidative YidJ-maturating enzyme;protein_id=NP_418130.1;transl_table=11 NC_000913.3 RefSeq gene 3855608 3855970 . - . ID=gene3758;Dbxref=EcoGene:EG11695,GeneID:948191;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;gene_synonym=ECK3666,JW3651;locus_tag=b3675 NC_000913.3 RefSeq CDS 3855608 3855970 . - 0 ID=cds3623;Parent=gene3758;Dbxref=ASAP:ABE-0012015,UniProtKB/Swiss-Prot:P0ADL6,Genbank:NP_418131.1,EcoGene:EG11695,GeneID:948191;Name=NP_418131.1;gbkey=CDS;gene=yidG;product=inner membrane protein;protein_id=NP_418131.1;transl_table=11 NC_000913.3 RefSeq gene 3855960 3856307 . - . ID=gene3759;Dbxref=EcoGene:EG11696,GeneID:948190;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;gene_synonym=ECK3667,JW3652;locus_tag=b3676 NC_000913.3 RefSeq CDS 3855960 3856307 . - 0 ID=cds3624;Parent=gene3759;Dbxref=ASAP:ABE-0012018,UniProtKB/Swiss-Prot:P0ADM0,Genbank:NP_418132.1,EcoGene:EG11696,GeneID:948190;Name=NP_418132.1;gbkey=CDS;gene=yidH;product=DUF202 family inner membrane protein;protein_id=NP_418132.1;transl_table=11 NC_000913.3 RefSeq gene 3856415 3856864 . + . ID=gene3760;Dbxref=EcoGene:EG11697,GeneID:948189;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;gene_synonym=ECK3668,JW3653;locus_tag=b3677 NC_000913.3 RefSeq CDS 3856415 3856864 . + 0 ID=cds3625;Parent=gene3760;Dbxref=ASAP:ABE-0012022,UniProtKB/Swiss-Prot:P31446,Genbank:NP_418133.1,EcoGene:EG11697,GeneID:948189;Name=NP_418133.1;gbkey=CDS;gene=yidI;product=inner membrane protein;protein_id=NP_418133.1;transl_table=11 NC_000913.3 RefSeq gene 3856911 3858404 . - . ID=gene3761;Dbxref=EcoGene:EG11705,GeneID:948188;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;gene_synonym=ECK3669,JW3654;locus_tag=b3678 NC_000913.3 RefSeq CDS 3856911 3858404 . - 0 ID=cds3626;Parent=gene3761;Dbxref=ASAP:ABE-0012024,UniProtKB/Swiss-Prot:P31447,Genbank:NP_418134.1,EcoGene:EG11705,GeneID:948188;Name=NP_418134.1;Note=putative sulfatase;gbkey=CDS;gene=yidJ;product=sulfatase/phosphatase superfamily protein;protein_id=NP_418134.1;transl_table=11 NC_000913.3 RefSeq gene 3858401 3860116 . - . ID=gene3762;Dbxref=EcoGene:EG11706,GeneID:948185;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;gene_synonym=ECK3670,JW3655;locus_tag=b3679 NC_000913.3 RefSeq CDS 3858401 3860116 . - 0 ID=cds3627;Parent=gene3762;Dbxref=ASAP:ABE-0012026,UniProtKB/Swiss-Prot:P31448,Genbank:NP_418135.1,EcoGene:EG11706,GeneID:948185;Name=NP_418135.1;Note=putative cotransporter;gbkey=CDS;gene=yidK;product=putative transporter;protein_id=NP_418135.1;transl_table=11 NC_000913.3 RefSeq gene 3860283 3861176 . + . ID=gene3763;Dbxref=EcoGene:EG11707,GeneID:948186;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;gene_synonym=ECK3671,JW3656;locus_tag=b3680 NC_000913.3 RefSeq CDS 3860283 3861176 . + 0 ID=cds3628;Parent=gene3763;Dbxref=ASAP:ABE-0012034,UniProtKB/Swiss-Prot:P31449,Genbank:NP_418136.2,EcoGene:EG11707,GeneID:948186;Name=NP_418136.2;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=yidL;product=AraC family putative transcriptional regulator;protein_id=NP_418136.2;transl_table=11 NC_000913.3 RefSeq gene 3861173 3861987 . - . ID=gene3764;Dbxref=EcoGene:EG11708,GeneID:1450301;Name=glvG;gbkey=Gene;gene=glvG;gene_biotype=pseudogene;gene_synonym=ECK3673,JW3658,yidM,ysdC;locus_tag=b4556;pseudo=true NC_000913.3 RefSeq CDS 3861173 3861987 . - 0 ID=cds3629;Parent=gene3764;Dbxref=ASAP:ABE-0012036,ASAP:ABE-0285077,UniProtKB/Swiss-Prot:P31450,EcoGene:EG11708,GeneID:1450301;Note=pseudogene~probable 6-phospho-beta-glucosidase;gbkey=CDS;gene=glvG;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3861987 3863603 . - . ID=gene3765;Dbxref=EcoGene:EG11710,GeneID:2847721;Name=glvC;gbkey=Gene;gene=glvC;gene_biotype=pseudogene;gene_synonym=ECK3674,glvB,JW3659,yidN,yidO;locus_tag=b3683;pseudo=true NC_000913.3 RefSeq CDS 3861987 3863603 . - 0 ID=cds3630;Parent=gene3765;Dbxref=ASAP:ABE-0012038,ASAP:ABE-0012043,UniProtKB/Swiss-Prot:P31452,EcoGene:EG11710,GeneID:2847721;Note=pseudogene%2C arbutin specific enzyme IIC component of PTS%3Benzyme%3B Transport of small molecules: Carbohydrates%2C organic acids%2C alcohols~PTS system%2C arbutin-like IIB component~PTS system%2C arbutin-like IIC component;gbkey=CDS;gene=glvC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3863899 3864615 . + . ID=gene3766;Dbxref=EcoGene:EG11711,GeneID:948194;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;gene_synonym=ECK3676,JW3661;locus_tag=b3684 NC_000913.3 RefSeq CDS 3863899 3864615 . + 0 ID=cds3631;Parent=gene3766;Dbxref=ASAP:ABE-0012049,UniProtKB/Swiss-Prot:P31453,Genbank:NP_418139.1,EcoGene:EG11711,GeneID:948194;Name=NP_418139.1;Note=putative transcriptional regulator;gbkey=CDS;gene=yidP;product=UTRA domain-containing GntR family putative transcriptional regulator;protein_id=NP_418139.1;transl_table=11 NC_000913.3 RefSeq gene 3864612 3866273 . - . ID=gene3767;Dbxref=EcoGene:EG11536,GeneID:948193;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;gene_synonym=ECK3677,JW3662,yibE;locus_tag=b3685 NC_000913.3 RefSeq CDS 3864612 3866273 . - 0 ID=cds3632;Parent=gene3767;Dbxref=ASAP:ABE-0012051,UniProtKB/Swiss-Prot:P60872,Genbank:NP_418140.4,EcoGene:EG11536,GeneID:948193;Name=NP_418140.4;Note=putative transport protein;gbkey=CDS;gene=yidE;product=putative transporter;protein_id=NP_418140.4;transl_table=11 NC_000913.3 RefSeq gene 3866469 3866897 . - . ID=gene3768;Dbxref=EcoGene:EG11535,GeneID:948192;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;gene_synonym=ECK3678,hslS,htpE,JW3663;locus_tag=b3686 NC_000913.3 RefSeq CDS 3866469 3866897 . - 0 ID=cds3633;Parent=gene3768;Dbxref=ASAP:ABE-0012054,UniProtKB/Swiss-Prot:P0C058,Genbank:NP_418141.2,EcoGene:EG11535,GeneID:948192;Name=NP_418141.2;Note=heat shock protein;gbkey=CDS;gene=ibpB;product=heat shock chaperone;protein_id=NP_418141.2;transl_table=11 NC_000913.3 RefSeq gene 3867009 3867422 . - . ID=gene3769;Dbxref=EcoGene:EG11534,GeneID:948200;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;gene_synonym=ECK3679,hslT,htpN,JW3664;locus_tag=b3687 NC_000913.3 RefSeq CDS 3867009 3867422 . - 0 ID=cds3634;Parent=gene3769;Dbxref=ASAP:ABE-0012058,UniProtKB/Swiss-Prot:P0C054,Genbank:NP_418142.1,EcoGene:EG11534,GeneID:948200;Name=NP_418142.1;Note=heat shock protein;gbkey=CDS;gene=ibpA;product=heat shock chaperone;protein_id=NP_418142.1;transl_table=11 NC_000913.3 RefSeq gene 3867728 3868060 . + . ID=gene3770;Dbxref=EcoGene:EG11712,GeneID:948199;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;gene_synonym=ecfI,ECK3680,JW5633;locus_tag=b3688 NC_000913.3 RefSeq CDS 3867728 3868060 . + 0 ID=cds3635;Parent=gene3770;Dbxref=ASAP:ABE-0012063,UniProtKB/Swiss-Prot:P0ADM4,Genbank:NP_418143.2,EcoGene:EG11712,GeneID:948199;Name=NP_418143.2;gbkey=CDS;gene=yidQ;product=DUF1375 family outer membrane protein;protein_id=NP_418143.2;transl_table=11 NC_000913.3 RefSeq gene 3868062 3869309 . - . ID=gene3771;Dbxref=EcoGene:EG11713,GeneID:948198;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;gene_synonym=ECK3681,JW5860;locus_tag=b3689 NC_000913.3 RefSeq CDS 3868062 3869309 . - 0 ID=cds3636;Parent=gene3771;Dbxref=ASAP:ABE-0012065,UniProtKB/Swiss-Prot:P31455,Genbank:NP_418144.3,EcoGene:EG11713,GeneID:948198;Name=NP_418144.3;gbkey=CDS;gene=yidR;product=DUF3748 family protein;protein_id=NP_418144.3;transl_table=11 NC_000913.3 RefSeq gene 3869377 3870441 . + . ID=gene3772;Dbxref=EcoGene:EG11714,GeneID:948197;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;gene_synonym=ECK3682,JW5631,yidS;locus_tag=b3690 NC_000913.3 RefSeq CDS 3869377 3870441 . + 0 ID=cds3637;Parent=gene3772;Dbxref=ASAP:ABE-0012068,UniProtKB/Swiss-Prot:P31456,Genbank:NP_418145.2,EcoGene:EG11714,GeneID:948197;Name=NP_418145.2;gbkey=CDS;gene=cbrA;product=colicin M resistance protein%3B FAD-binding protein%2C putative oxidoreductase;protein_id=NP_418145.2;transl_table=11 NC_000913.3 RefSeq gene 3870438 3871730 . - . ID=gene3773;Dbxref=EcoGene:EG11715,GeneID:948196;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;gene_synonym=ECK3683,JW5859,yidT;locus_tag=b3691 NC_000913.3 RefSeq CDS 3870438 3871730 . - 0 ID=cds3638;Parent=gene3773;Dbxref=ASAP:ABE-0012072,UniProtKB/Swiss-Prot:P0AA76,Genbank:NP_418146.4,EcoGene:EG11715,GeneID:948196;Name=NP_418146.4;Note=D-galactonate transport;gbkey=CDS;gene=dgoT;product=D-galactonate transporter;protein_id=NP_418146.4;transl_table=11 NC_000913.3 RefSeq gene 3871850 3872998 . - . ID=gene3774;Dbxref=EcoGene:EG20050,GeneID:2847765;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;gene_synonym=ECK3684,JW5629,yidU;locus_tag=b4478 NC_000913.3 RefSeq CDS 3871850 3872998 . - 0 ID=cds3639;Parent=gene3774;Dbxref=ASAP:ABE-0174106,UniProtKB/Swiss-Prot:Q6BF17,Genbank:YP_026237.1,EcoGene:EG20050,GeneID:2847765;Name=YP_026237.1;gbkey=CDS;gene=dgoD;product=D-galactonate dehydratase;protein_id=YP_026237.1;transl_table=11 NC_000913.3 RefSeq gene 3872995 3873612 . - . ID=gene3775;Dbxref=EcoGene:EG11716,GeneID:2847766;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;gene_synonym=ECK3685,JW5628,yidU;locus_tag=b4477 NC_000913.3 RefSeq CDS 3872995 3873612 . - 0 ID=cds3640;Parent=gene3775;Dbxref=ASAP:ABE-0174107,UniProtKB/Swiss-Prot:Q6BF16,Genbank:YP_026238.1,EcoGene:EG11716,GeneID:2847766;Name=YP_026238.1;gbkey=CDS;gene=dgoA;product=2-oxo-3-deoxygalactonate 6-phosphate aldolase;protein_id=YP_026238.1;transl_table=11 NC_000913.3 RefSeq gene 3873596 3874474 . - . ID=gene3776;Dbxref=EcoGene:EG11717,GeneID:948207;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;gene_synonym=ECK3686,JW3670,yidV;locus_tag=b3693 NC_000913.3 RefSeq CDS 3873596 3874474 . - 0 ID=cds3641;Parent=gene3776;Dbxref=ASAP:ABE-0012076,UniProtKB/Swiss-Prot:P31459,Genbank:NP_418148.1,EcoGene:EG11717,GeneID:948207;Name=NP_418148.1;gbkey=CDS;gene=dgoK;product=2-oxo-3-deoxygalactonate kinase;protein_id=NP_418148.1;transl_table=11 NC_000913.3 RefSeq gene 3874471 3875160 . - . ID=gene3777;Dbxref=EcoGene:EG11718,GeneID:2847767;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;gene_synonym=ECK3687,JW5627,yidW;locus_tag=b4479 NC_000913.3 RefSeq CDS 3874471 3875160 . - 0 ID=cds3642;Parent=gene3777;Dbxref=ASAP:ABE-0174108,UniProtKB/Swiss-Prot:P31460,Genbank:YP_026239.1,EcoGene:EG11718,GeneID:2847767;Name=YP_026239.1;Note=transcriptional repressor for galactonate utilization (GntR family);gbkey=CDS;gene=dgoR;product=D-galactonate catabolism operon transcriptional repressor;protein_id=YP_026239.1;transl_table=11 NC_000913.3 RefSeq gene 3875438 3876094 . + . ID=gene3778;Dbxref=EcoGene:EG11719,GeneID:948202;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;gene_synonym=ECK3688,JW5858;locus_tag=b3696 NC_000913.3 RefSeq CDS 3875438 3876094 . + 0 ID=cds3643;Parent=gene3778;Dbxref=ASAP:ABE-0012084,UniProtKB/Swiss-Prot:P0ADM6,Genbank:YP_026240.1,EcoGene:EG11719,GeneID:948202;Name=YP_026240.1;Note=putative replicase EC 2.7.-;gbkey=CDS;gene=yidX;product=putative lipoprotein;protein_id=YP_026240.1;transl_table=11 NC_000913.3 RefSeq gene 3876140 3876952 . - . ID=gene3779;Dbxref=EcoGene:EG11195,GeneID:948204;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;gene_synonym=ECK3689,JW3674;locus_tag=b3697 NC_000913.3 RefSeq CDS 3876140 3876952 . - 0 ID=cds3644;Parent=gene3779;Dbxref=ASAP:ABE-0012086,UniProtKB/Swiss-Prot:P0A8Y5,Genbank:NP_418152.1,EcoGene:EG11195,GeneID:948204;Name=NP_418152.1;gbkey=CDS;gene=yidA;product=sugar phosphate phosphatase;protein_id=NP_418152.1;transl_table=11 NC_000913.3 RefSeq gene 3877067 3877465 . - . ID=gene3780;Dbxref=EcoGene:EG11196,GeneID:948212;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;gene_synonym=ECK3690,JW3675;locus_tag=b3698 NC_000913.3 RefSeq CDS 3877067 3877465 . - 0 ID=cds3645;Parent=gene3780;Dbxref=ASAP:ABE-0012089,UniProtKB/Swiss-Prot:P09996,Genbank:NP_418153.4,EcoGene:EG11196,GeneID:948212;Name=NP_418153.4;gbkey=CDS;gene=yidB;product=DUF937 family protein;protein_id=NP_418153.4;transl_table=11 NC_000913.3 RefSeq repeat_region 3877586 3877683 . + . ID=id467;Note=RIP280 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3877705 3880119 . - . ID=gene3781;Dbxref=EcoGene:EG10424,GeneID:948211;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;gene_synonym=acrB,Cou,ECK3691,himB,hisU,hopA,JW5625,nalC,parA,pcbA,pcpA;locus_tag=b3699 NC_000913.3 RefSeq CDS 3877705 3880119 . - 0 ID=cds3646;Parent=gene3781;Dbxref=ASAP:ABE-0012093,UniProtKB/Swiss-Prot:P0AES6,Genbank:YP_026241.1,EcoGene:EG10424,GeneID:948211;Name=YP_026241.1;Note=DNA gyrase subunit B%2C type II topoisomerase%2C ATPase activity;gbkey=CDS;gene=gyrB;product=DNA gyrase%2C subunit B;protein_id=YP_026241.1;transl_table=11 NC_000913.3 RefSeq gene 3880148 3881221 . - . ID=gene3782;Dbxref=EcoGene:EG10828,GeneID:948209;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;gene_synonym=ECK3692,JW3677,uvrF;locus_tag=b3700 NC_000913.3 RefSeq CDS 3880148 3881221 . - 0 ID=cds3647;Parent=gene3782;Dbxref=ASAP:ABE-0012095,UniProtKB/Swiss-Prot:P0A7H0,Genbank:NP_418155.1,EcoGene:EG10828,GeneID:948209;Name=NP_418155.1;Note=ssDNA and dsDNA binding%2C ATP binding;gbkey=CDS;gene=recF;product=gap repair protein;protein_id=NP_418155.1;transl_table=11 NC_000913.3 RefSeq gene 3881221 3882321 . - . ID=gene3783;Dbxref=EcoGene:EG10242,GeneID:948218;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;gene_synonym=ECK3693,JW3678;locus_tag=b3701 NC_000913.3 RefSeq CDS 3881221 3882321 . - 0 ID=cds3648;Parent=gene3783;Dbxref=ASAP:ABE-0012098,UniProtKB/Swiss-Prot:P0A988,Genbank:NP_418156.1,EcoGene:EG10242,GeneID:948218;Name=NP_418156.1;Note=DNA polymerase III%2C beta-subunit;gbkey=CDS;gene=dnaN;product=DNA polymerase III%2C beta subunit;protein_id=NP_418156.1;transl_table=11 NC_000913.3 RefSeq gene 3882326 3883729 . - . ID=gene3784;Dbxref=EcoGene:EG10235,GeneID:948217;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;gene_synonym=ECK3694,hsm-2,JW3679;locus_tag=b3702 NC_000913.3 RefSeq CDS 3882326 3883729 . - 0 ID=cds3649;Parent=gene3784;Dbxref=ASAP:ABE-0012103,UniProtKB/Swiss-Prot:P03004,Genbank:NP_418157.1,EcoGene:EG10235,GeneID:948217;Name=NP_418157.1;Note=DNA biosynthesis%3B initiation of chromosome replication%3B can be transcription regulator;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA%2C DNA-binding transcriptional dual regulator;protein_id=NP_418157.1;transl_table=11 NC_000913.3 RefSeq gene 3884336 3884476 . + . ID=gene3785;Dbxref=EcoGene:EG10892,GeneID:948216;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;gene_synonym=ECK3695,JW3680,rimA,ssaF;locus_tag=b3703 NC_000913.3 RefSeq CDS 3884336 3884476 . + 0 ID=cds3650;Parent=gene3785;Dbxref=ASAP:ABE-0012115,UniProtKB/Swiss-Prot:P0A7P5,Genbank:NP_418158.1,EcoGene:EG10892,GeneID:948216;Name=NP_418158.1;gbkey=CDS;gene=rpmH;product=50S ribosomal subunit protein L34;protein_id=NP_418158.1;transl_table=11 NC_000913.3 RefSeq gene 3884493 3884852 . + . ID=gene3786;Dbxref=EcoGene:EG10862,GeneID:948215;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;gene_synonym=ECK3696,JW3681;locus_tag=b3704 NC_000913.3 RefSeq CDS 3884493 3884852 . + 0 ID=cds3651;Parent=gene3786;Dbxref=ASAP:ABE-0012117,UniProtKB/Swiss-Prot:P0A7Y8,Genbank:NP_418159.1,EcoGene:EG10862,GeneID:948215;Name=NP_418159.1;Note=RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA%2C 4.5S RNA%2C and other naturally occurring stable RNA molecules%3B RNase P also affects gene expression of polycistronic operon mRNAs;gbkey=CDS;gene=rnpA;product=protein C5 component of RNase P;protein_id=NP_418159.1;transl_table=11 NC_000913.3 RefSeq gene 3884816 3885073 . + . ID=gene3787;Dbxref=EcoGene:EG11348,GeneID:1450303;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;gene_synonym=ECK3697,JW3682;locus_tag=b4557 NC_000913.3 RefSeq CDS 3884816 3885073 . + 0 ID=cds3652;Parent=gene3787;Dbxref=ASAP:ABE-0285078,UniProtKB/Swiss-Prot:P0A8C8,Genbank:YP_588472.1,EcoGene:EG11348,GeneID:1450303;Name=YP_588472.1;gbkey=CDS;gene=yidD;product=membrane protein insertion efficiency factor%2C UPF0161 family inner membrane protein;protein_id=YP_588472.1;transl_table=11 NC_000913.3 RefSeq gene 3885076 3886722 . + . ID=gene3788;Dbxref=EcoGene:EG11197,GeneID:948214;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;gene_synonym=ECK3698,JW3683;locus_tag=b3705 NC_000913.3 RefSeq CDS 3885076 3886722 . + 0 ID=cds3653;Parent=gene3788;Dbxref=ASAP:ABE-0012120,UniProtKB/Swiss-Prot:P25714,Genbank:NP_418161.1,EcoGene:EG11197,GeneID:948214;Name=NP_418161.1;Note=60 KD inner-membrane protein;gbkey=CDS;gene=yidC;product=membrane protein insertase;protein_id=NP_418161.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3886778 3886806 . + . ID=id468;Note=REP281 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3886828 3888192 . + . ID=gene3789;Dbxref=EcoGene:EG10997,GeneID:948222;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;gene_synonym=ECK3699,JW3684,thdF,trmE;locus_tag=b3706 NC_000913.3 RefSeq CDS 3886828 3888192 . + 0 ID=cds3654;Parent=gene3789;Dbxref=ASAP:ABE-0012123,UniProtKB/Swiss-Prot:P25522,Genbank:NP_418162.1,EcoGene:EG10997,GeneID:948222;Name=NP_418162.1;gbkey=CDS;gene=mnmE;product=tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase;protein_id=NP_418162.1;transl_table=11 NC_000913.3 RefSeq gene 3888435 3888509 . + . ID=gene3790;Dbxref=EcoGene:EG11276,GeneID:948223;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;gene_synonym=ECK3700,JW3685,tnaL;locus_tag=b3707 NC_000913.3 RefSeq CDS 3888435 3888509 . + 0 ID=cds3655;Parent=gene3790;Dbxref=ASAP:ABE-0012128,UniProtKB/Swiss-Prot:P0AD89,Genbank:NP_418163.1,EcoGene:EG11276,GeneID:948223;Name=NP_418163.1;gbkey=CDS;gene=tnaC;product=tryptophanase leader peptide;protein_id=NP_418163.1;transl_table=11 NC_000913.3 RefSeq gene 3888730 3890145 . + . ID=gene3791;Dbxref=EcoGene:EG11005,GeneID:948221;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;gene_synonym=ECK3701,ind,JW3686;locus_tag=b3708 NC_000913.3 RefSeq CDS 3888730 3890145 . + 0 ID=cds3656;Parent=gene3791;Dbxref=ASAP:ABE-0012133,UniProtKB/Swiss-Prot:P0A853,Genbank:NP_418164.4,EcoGene:EG11005,GeneID:948221;Name=NP_418164.4;Note=tryptophanase;gbkey=CDS;gene=tnaA;product=tryptophanase/L-cysteine desulfhydrase%2C PLP-dependent;protein_id=NP_418164.4;transl_table=11 NC_000913.3 RefSeq gene 3890236 3891483 . + . ID=gene3792;Dbxref=EcoGene:EG11006,GeneID:948220;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;gene_synonym=ECK3702,JW5619,JW5622,tnaP,trpP;locus_tag=b3709 NC_000913.3 RefSeq CDS 3890236 3891483 . + 0 ID=cds3657;Parent=gene3792;Dbxref=ASAP:ABE-0012135,UniProtKB/Swiss-Prot:P23173,Genbank:NP_418165.1,EcoGene:EG11006,GeneID:948220;Name=NP_418165.1;Note=low affinity tryptophan permease;gbkey=CDS;gene=tnaB;product=tryptophan transporter of low affinity;protein_id=NP_418165.1;transl_table=11 NC_000913.3 RefSeq gene 3891615 3892790 . + . ID=gene3793;Dbxref=EcoGene:EG11720,GeneID:948219;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;gene_synonym=ECK3703,JW3688,yidY;locus_tag=b3710 NC_000913.3 RefSeq CDS 3891615 3892790 . + 0 ID=cds3658;Parent=gene3793;Dbxref=ASAP:ABE-0012139,UniProtKB/Swiss-Prot:P31462,Genbank:NP_418166.1,EcoGene:EG11720,GeneID:948219;Name=NP_418166.1;Note=putative transport protein;gbkey=CDS;gene=mdtL;product=multidrug efflux system protein;protein_id=NP_418166.1;transl_table=11 NC_000913.3 RefSeq gene 3892765 3893724 . + . ID=gene3794;Dbxref=EcoGene:EG11721,GeneID:948227;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;gene_synonym=ECK3704,JW3689;locus_tag=b3711 NC_000913.3 RefSeq CDS 3892765 3893724 . + 0 ID=cds3659;Parent=gene3794;Dbxref=ASAP:ABE-0012141,UniProtKB/Swiss-Prot:P31463,Genbank:NP_418167.1,EcoGene:EG11721,GeneID:948227;Name=NP_418167.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=yidZ;product=putative DNA-binding transcriptional regulator;protein_id=NP_418167.1;transl_table=11 NC_000913.3 RefSeq gene 3893881 3894630 . + . ID=gene3795;Dbxref=EcoGene:EG11722,GeneID:948226;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;gene_synonym=ECK3705,JW3690;locus_tag=b3712 NC_000913.3 RefSeq CDS 3893881 3894630 . + 0 ID=cds3660;Parent=gene3795;Dbxref=ASAP:ABE-0012144,UniProtKB/Swiss-Prot:P0ADM8,Genbank:NP_418168.2,EcoGene:EG11722,GeneID:948226;Name=NP_418168.2;gbkey=CDS;gene=yieE;product=phosphopantetheinyl transferase superfamily protein;protein_id=NP_418168.2;transl_table=11 NC_000913.3 RefSeq gene 3894652 3895218 . + . ID=gene3796;Dbxref=EcoGene:EG11723,GeneID:948225;Name=chrR;gbkey=Gene;gene=chrR;gene_biotype=protein_coding;gene_synonym=ECK3706,JW3691,yieF;locus_tag=b3713 NC_000913.3 RefSeq CDS 3894652 3895218 . + 0 ID=cds3661;Parent=gene3796;Dbxref=ASAP:ABE-0012146,UniProtKB/Swiss-Prot:P0AGE6,Genbank:NP_418169.1,EcoGene:EG11723,GeneID:948225;Name=NP_418169.1;gbkey=CDS;gene=chrR;product=chromate reductase%2C Class I%2C flavoprotein;protein_id=NP_418169.1;transl_table=11 NC_000913.3 RefSeq gene 3895272 3896609 . - . ID=gene3797;Dbxref=EcoGene:EG11724,GeneID:948224;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;gene_synonym=ECK3707,JW3692,purP,yieG;locus_tag=b3714 NC_000913.3 RefSeq CDS 3895272 3896609 . - 0 ID=cds3662;Parent=gene3797;Dbxref=ASAP:ABE-0012148,UniProtKB/Swiss-Prot:P31466,Genbank:NP_418170.1,EcoGene:EG11724,GeneID:948224;Name=NP_418170.1;Note=putative membrane / transport protein;gbkey=CDS;gene=adeP;product=adenine permease%2C high affinity%3B adenine:H+ symporter;protein_id=NP_418170.1;transl_table=11 NC_000913.3 RefSeq gene 3896774 3897439 . + . ID=gene3798;Dbxref=EcoGene:EG11725,GeneID:948232;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;gene_synonym=ECK3708,JW3693;locus_tag=b3715 NC_000913.3 RefSeq CDS 3896774 3897439 . + 0 ID=cds3663;Parent=gene3798;Dbxref=ASAP:ABE-0012153,UniProtKB/Swiss-Prot:P31467,Genbank:NP_418171.1,EcoGene:EG11725,GeneID:948232;Name=NP_418171.1;Note=putative phosphatase;gbkey=CDS;gene=yieH;product=phosphoenolpyruvate and 6-phosphogluconate phosphatase;protein_id=NP_418171.1;transl_table=11 NC_000913.3 RefSeq gene 3897506 3897973 . + . ID=gene3799;Dbxref=EcoGene:EG11726,GeneID:948231;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;gene_synonym=ECK3709,JW3694,yieI;locus_tag=b3716 NC_000913.3 RefSeq CDS 3897506 3897973 . + 0 ID=cds3664;Parent=gene3799;Dbxref=ASAP:ABE-0012156,UniProtKB/Swiss-Prot:P31468,Genbank:NP_418172.1,EcoGene:EG11726,GeneID:948231;Name=NP_418172.1;gbkey=CDS;gene=cbrB;product=PRK09823 family inner membrane protein%2C creBC regulon;protein_id=NP_418172.1;transl_table=11 NC_000913.3 RefSeq gene 3898022 3898609 . + . ID=gene3800;Dbxref=EcoGene:EG11727,GeneID:948230;Name=cbrC;gbkey=Gene;gene=cbrC;gene_biotype=protein_coding;gene_synonym=ECK3710,JW3695,yieJ;locus_tag=b3717 NC_000913.3 RefSeq CDS 3898022 3898609 . + 0 ID=cds3665;Parent=gene3800;Dbxref=ASAP:ABE-0012158,UniProtKB/Swiss-Prot:P31469,Genbank:NP_418173.1,EcoGene:EG11727,GeneID:948230;Name=NP_418173.1;gbkey=CDS;gene=cbrC;product=UPF0167 family protein;protein_id=NP_418173.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3898631 3898656 . + . ID=id469;Note=REP282 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3898671 3899393 . - . ID=gene3801;Dbxref=EcoGene:EG11728,GeneID:948229;Name=yieK;gbkey=Gene;gene=yieK;gene_biotype=protein_coding;gene_synonym=ECK3711,JW5613;locus_tag=b3718 NC_000913.3 RefSeq CDS 3898671 3899393 . - 0 ID=cds3666;Parent=gene3801;Dbxref=ASAP:ABE-0012160,UniProtKB/Swiss-Prot:P31470,Genbank:YP_026242.1,EcoGene:EG11728,GeneID:948229;Name=YP_026242.1;Note=pyrimidine-specific nucleoside hydrolase;gbkey=CDS;gene=yieK;product=putative 6-phosphogluconolactonase;protein_id=YP_026242.1;transl_table=11 NC_000913.3 RefSeq gene 3899408 3900577 . - . ID=gene3802;Dbxref=EcoGene:EG11729,GeneID:948272;Name=yieL;gbkey=Gene;gene=yieL;gene_biotype=protein_coding;gene_synonym=ECK3712,JW5612;locus_tag=b3719 NC_000913.3 RefSeq CDS 3899408 3900577 . - 0 ID=cds3667;Parent=gene3802;Dbxref=ASAP:ABE-0012163,UniProtKB/Swiss-Prot:P31471,Genbank:NP_418175.3,EcoGene:EG11729,GeneID:948272;Name=NP_418175.3;Note=putative xylanase;gbkey=CDS;gene=yieL;product=putative xylanase;protein_id=NP_418175.3;transl_table=11 NC_000913.3 RefSeq gene 3900604 3902220 . - . ID=gene3803;Dbxref=EcoGene:EG11364,GeneID:948228;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;gene_synonym=ECK3713,JW3698,yieC;locus_tag=b3720 NC_000913.3 RefSeq CDS 3900604 3902220 . - 0 ID=cds3668;Parent=gene3803;Dbxref=ASAP:ABE-0012165,UniProtKB/Swiss-Prot:P26218,Genbank:NP_418176.1,EcoGene:EG11364,GeneID:948228;Name=NP_418176.1;Note=putative receptor protein;gbkey=CDS;gene=bglH;product=carbohydrate-specific outer membrane porin%2C cryptic;protein_id=NP_418176.1;transl_table=11 NC_000913.3 RefSeq gene 3902289 3903701 . - . ID=gene3804;Dbxref=EcoGene:EG10114,GeneID:948234;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;gene_synonym=ECK3714,JW3699;locus_tag=b3721 NC_000913.3 RefSeq CDS 3902289 3903701 . - 0 ID=cds3669;Parent=gene3804;Dbxref=ASAP:ABE-0012169,UniProtKB/Swiss-Prot:P11988,Genbank:NP_418177.1,EcoGene:EG10114,GeneID:948234;Name=NP_418177.1;Note=phospho-beta-glucosidase B%3B cryptic;gbkey=CDS;gene=bglB;product=cryptic phospho-beta-glucosidase B;protein_id=NP_418177.1;transl_table=11 NC_000913.3 RefSeq gene 3903720 3905597 . - . ID=gene3805;Dbxref=EcoGene:EG10115,GeneID:948236;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;gene_synonym=bglC,bglS,ECK3715,JW3700;locus_tag=b3722 NC_000913.3 RefSeq CDS 3903720 3905597 . - 0 ID=cds3670;Parent=gene3805;Dbxref=ASAP:ABE-0012171,UniProtKB/Swiss-Prot:P08722,Genbank:NP_418178.1,EcoGene:EG10115,GeneID:948236;Name=NP_418178.1;Note=PTS system beta-glucosides%2C enzyme II%2C cryptic;gbkey=CDS;gene=bglF;product=fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component;protein_id=NP_418178.1;transl_table=11 NC_000913.3 RefSeq gene 3905731 3906567 . - . ID=gene3806;Dbxref=EcoGene:EG10116,GeneID:948235;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;gene_synonym=bglC,bglR,bglS,ECK3716,JW3701;locus_tag=b3723 NC_000913.3 RefSeq CDS 3905731 3906567 . - 0 ID=cds3671;Parent=gene3806;Dbxref=ASAP:ABE-0012174,UniProtKB/Swiss-Prot:P11989,Genbank:NP_418179.1,EcoGene:EG10116,GeneID:948235;Name=NP_418179.1;Note=positive regulation of bgl operon;gbkey=CDS;gene=bglG;product=transcriptional antiterminator of the bgl operon;protein_id=NP_418179.1;transl_table=11 NC_000913.3 RefSeq gene 3906853 3907578 . - . ID=gene3807;Dbxref=EcoGene:EG10735,GeneID:948233;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;gene_synonym=ECK3717,JW3702,phoT;locus_tag=b3724 NC_000913.3 RefSeq CDS 3906853 3907578 . - 0 ID=cds3672;Parent=gene3807;Dbxref=ASAP:ABE-0012177,UniProtKB/Swiss-Prot:P0A9K7,Genbank:NP_418180.1,EcoGene:EG10735,GeneID:948233;Name=NP_418180.1;Note=negative regulator for pho regulon and putative enzyme in phosphate metabolism;gbkey=CDS;gene=phoU;product=negative regulator of PhoR/PhoB two-component regulator;protein_id=NP_418180.1;transl_table=11 NC_000913.3 RefSeq gene 3907593 3908366 . - . ID=gene3808;Dbxref=EcoGene:EG10783,GeneID:948240;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;gene_synonym=ECK3718,JW3703,phoT;locus_tag=b3725 NC_000913.3 RefSeq CDS 3907593 3908366 . - 0 ID=cds3673;Parent=gene3808;Dbxref=ASAP:ABE-0012179,UniProtKB/Swiss-Prot:P0AAH0,Genbank:NP_418181.1,EcoGene:EG10783,GeneID:948240;Name=NP_418181.1;Note=ATP-binding component of high-affinity phosphate-specific transport system%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=pstB;product=phosphate ABC transporter ATPase;protein_id=NP_418181.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3908387 3908450 . + . ID=id470;Note=REP283 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3908549 3909439 . - . ID=gene3809;Dbxref=EcoGene:EG10782,GeneID:948239;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;gene_synonym=ECK3719,JW3704,phoR2b,phoT,R2pho;locus_tag=b3726 NC_000913.3 RefSeq CDS 3908549 3909439 . - 0 ID=cds3674;Parent=gene3809;Dbxref=ASAP:ABE-0012184,UniProtKB/Swiss-Prot:P07654,Genbank:NP_418182.1,EcoGene:EG10782,GeneID:948239;Name=NP_418182.1;Note=high-affinity phosphate-specific transport system%3B membrane component of ABC superfamily;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=NP_418182.1;transl_table=11 NC_000913.3 RefSeq gene 3909439 3910398 . - . ID=gene3810;Dbxref=EcoGene:EG10784,GeneID:948238;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;gene_synonym=ECK3720,JW3705,phoW;locus_tag=b3727 NC_000913.3 RefSeq CDS 3909439 3910398 . - 0 ID=cds3675;Parent=gene3810;Dbxref=ASAP:ABE-0012186,UniProtKB/Swiss-Prot:P0AGH8,Genbank:NP_418183.1,EcoGene:EG10784,GeneID:948238;Name=NP_418183.1;Note=high-affinity phosphate-specific transport system%2C cytoplasmic membrane component%3B membrane component of ABC superfamily;gbkey=CDS;gene=pstC;product=phosphate ABC transporter permease;protein_id=NP_418183.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3910443 3910477 . + . ID=id471;Note=REP284 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3910485 3911525 . - . ID=gene3811;Dbxref=EcoGene:EG10734,GeneID:948237;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;gene_synonym=ECK3721,JW3706,nmpA,phoR2a,phoS,R2pho;locus_tag=b3728 NC_000913.3 RefSeq CDS 3910485 3911525 . - 0 ID=cds3676;Parent=gene3811;Dbxref=ASAP:ABE-0012190,UniProtKB/Swiss-Prot:P0AG82,Genbank:NP_418184.1,EcoGene:EG10734,GeneID:948237;Name=NP_418184.1;Note=high-affinity phosphate-specific transport system%3B periplasmic phosphate-binding protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=pstS;product=phosphate ABC transporter periplasmic binding protein;protein_id=NP_418184.1;transl_table=11 NC_000913.3 RefSeq gene 3911839 3913668 . - . ID=gene3812;Dbxref=EcoGene:EG10382,GeneID:948241;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;gene_synonym=ECK3722,JW3707;locus_tag=b3729 NC_000913.3 RefSeq CDS 3911839 3913668 . - 0 ID=cds3677;Parent=gene3812;Dbxref=ASAP:ABE-0012198,UniProtKB/Swiss-Prot:P17169,Genbank:NP_418185.1,EcoGene:EG10382,GeneID:948241;Name=NP_418185.1;gbkey=CDS;gene=glmS;product=L-glutamine:D-fructose-6-phosphate aminotransferase;protein_id=NP_418185.1;transl_table=11 NC_000913.3 RefSeq gene 3913830 3915200 . - . ID=gene3813;Dbxref=EcoGene:EG11198,GeneID:948246;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;gene_synonym=ECK3723,JW3708,tms,yieA;locus_tag=b3730 NC_000913.3 RefSeq CDS 3913830 3915200 . - 0 ID=cds3678;Parent=gene3813;Dbxref=ASAP:ABE-0012201,UniProtKB/Swiss-Prot:P0ACC7,Genbank:NP_418186.1,EcoGene:EG11198,GeneID:948246;Name=NP_418186.1;Note=N-acetyl glucosamine-1-phosphate uridyltransferase;gbkey=CDS;gene=glmU;product=fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase;protein_id=NP_418186.1;transl_table=11 NC_000913.3 RefSeq gene 3915553 3915972 . - . ID=gene3814;Dbxref=EcoGene:EG10100,GeneID:948245;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;gene_synonym=ECK3724,JW3709,papG,uncC;locus_tag=b3731 NC_000913.3 RefSeq CDS 3915553 3915972 . - 0 ID=cds3679;Parent=gene3814;Dbxref=ASAP:ABE-0012206,UniProtKB/Swiss-Prot:P0A6E6,Genbank:NP_418187.1,EcoGene:EG10100,GeneID:948245;Name=NP_418187.1;Note=membrane-bound ATP synthase%2C F1 sector%2C epsilon-subunit;gbkey=CDS;gene=atpC;product=F1 sector of membrane-bound ATP synthase%2C epsilon subunit;protein_id=NP_418187.1;transl_table=11 NC_000913.3 RefSeq gene 3915993 3917375 . - . ID=gene3815;Dbxref=EcoGene:EG10101,GeneID:948244;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;gene_synonym=ECK3725,JW3710,papB,uncD;locus_tag=b3732 NC_000913.3 RefSeq CDS 3915993 3917375 . - 0 ID=cds3680;Parent=gene3815;Dbxref=ASAP:ABE-0012208,UniProtKB/Swiss-Prot:P0ABB4,Genbank:NP_418188.1,EcoGene:EG10101,GeneID:948244;Name=NP_418188.1;Note=membrane-bound ATP synthase%2C F1 sector%2C beta-subunit;gbkey=CDS;gene=atpD;product=F1 sector of membrane-bound ATP synthase%2C beta subunit;protein_id=NP_418188.1;transl_table=11 NC_000913.3 RefSeq gene 3917402 3918265 . - . ID=gene3816;Dbxref=EcoGene:EG10104,GeneID:948243;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;gene_synonym=ECK3726,JW3711,papC,uncG;locus_tag=b3733 NC_000913.3 RefSeq CDS 3917402 3918265 . - 0 ID=cds3681;Parent=gene3816;Dbxref=ASAP:ABE-0012211,UniProtKB/Swiss-Prot:P0ABA6,Genbank:NP_418189.1,EcoGene:EG10104,GeneID:948243;Name=NP_418189.1;Note=membrane-bound ATP synthase%2C F1 sector%2C gamma-subunit;gbkey=CDS;gene=atpG;product=F1 sector of membrane-bound ATP synthase%2C gamma subunit;protein_id=NP_418189.1;transl_table=11 NC_000913.3 RefSeq gene 3918316 3919857 . - . ID=gene3817;Dbxref=EcoGene:EG10098,GeneID:948242;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;gene_synonym=ECK3727,JW3712,papA,uncA;locus_tag=b3734 NC_000913.3 RefSeq CDS 3918316 3919857 . - 0 ID=cds3682;Parent=gene3817;Dbxref=ASAP:ABE-0012213,UniProtKB/Swiss-Prot:P0ABB0,Genbank:NP_418190.1,EcoGene:EG10098,GeneID:948242;Name=NP_418190.1;Note=membrane-bound ATP synthase%2C F1 sector%2C alpha-subunit;gbkey=CDS;gene=atpA;product=F1 sector of membrane-bound ATP synthase%2C alpha subunit;protein_id=NP_418190.1;transl_table=11 NC_000913.3 RefSeq gene 3919870 3920403 . - . ID=gene3818;Dbxref=EcoGene:EG10105,GeneID:948254;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;gene_synonym=ECK3728,JW3713,papE,uncH;locus_tag=b3735 NC_000913.3 RefSeq CDS 3919870 3920403 . - 0 ID=cds3683;Parent=gene3818;Dbxref=ASAP:ABE-0012215,UniProtKB/Swiss-Prot:P0ABA4,Genbank:NP_418191.1,EcoGene:EG10105,GeneID:948254;Name=NP_418191.1;Note=membrane-bound ATP synthase%2C F1 sector%2C delta-subunit;gbkey=CDS;gene=atpH;product=F1 sector of membrane-bound ATP synthase%2C delta subunit;protein_id=NP_418191.1;transl_table=11 NC_000913.3 RefSeq gene 3920418 3920888 . - . ID=gene3819;Dbxref=EcoGene:EG10103,GeneID:948247;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;gene_synonym=ECK3729,JW3714,papF,uncF;locus_tag=b3736 NC_000913.3 RefSeq CDS 3920418 3920888 . - 0 ID=cds3684;Parent=gene3819;Dbxref=ASAP:ABE-0012217,UniProtKB/Swiss-Prot:P0ABA0,Genbank:NP_418192.1,EcoGene:EG10103,GeneID:948247;Name=NP_418192.1;Note=membrane-bound ATP synthase%2C F0 sector%2C subunit b;gbkey=CDS;gene=atpF;product=F0 sector of membrane-bound ATP synthase%2C subunit b;protein_id=NP_418192.1;transl_table=11 NC_000913.3 RefSeq gene 3920950 3921189 . - . ID=gene3820;Dbxref=EcoGene:EG10102,GeneID:948253;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;gene_synonym=ECK3730,JW3715,papH,uncE;locus_tag=b3737 NC_000913.3 RefSeq CDS 3920950 3921189 . - 0 ID=cds3685;Parent=gene3820;Dbxref=ASAP:ABE-0012220,UniProtKB/Swiss-Prot:P68699,Genbank:NP_418193.1,EcoGene:EG10102,GeneID:948253;Name=NP_418193.1;Note=membrane-bound ATP synthase%2C F0 sector%2C subunit c;gbkey=CDS;gene=atpE;product=F0 sector of membrane-bound ATP synthase%2C subunit c;protein_id=NP_418193.1;transl_table=11 NC_000913.3 RefSeq gene 3921236 3922051 . - . ID=gene3821;Dbxref=EcoGene:EG10099,GeneID:948252;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;gene_synonym=ECK3731,JW3716,papD,uncB;locus_tag=b3738 NC_000913.3 RefSeq CDS 3921236 3922051 . - 0 ID=cds3686;Parent=gene3821;Dbxref=ASAP:ABE-0012222,UniProtKB/Swiss-Prot:P0AB98,Genbank:NP_418194.1,EcoGene:EG10099,GeneID:948252;Name=NP_418194.1;Note=membrane-bound ATP synthase%2C F0 sector%2C subunit a;gbkey=CDS;gene=atpB;product=F0 sector of membrane-bound ATP synthase%2C subunit a;protein_id=NP_418194.1;transl_table=11 NC_000913.3 RefSeq gene 3922060 3922440 . - . ID=gene3822;Dbxref=EcoGene:EG10106,GeneID:948251;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;gene_synonym=ECK3732,JW5611,uncI;locus_tag=b3739 NC_000913.3 RefSeq CDS 3922060 3922440 . - 0 ID=cds3687;Parent=gene3822;Dbxref=ASAP:ABE-0012224,UniProtKB/Swiss-Prot:P0ABC0,Genbank:NP_418195.2,EcoGene:EG10106,GeneID:948251;Name=NP_418195.2;Note=membrane-bound ATP synthase%2C dispensable protein%2C affects expression of atpB;gbkey=CDS;gene=atpI;product=ATP synthase%2C membrane-bound accessory factor;protein_id=NP_418195.2;transl_table=11 NC_000913.3 RefSeq gene 3923057 3923680 . - . ID=gene3823;Dbxref=EcoGene:EG10376,GeneID:948250;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;gene_synonym=ECK3733,gidB,JW3718;locus_tag=b3740 NC_000913.3 RefSeq CDS 3923057 3923680 . - 0 ID=cds3688;Parent=gene3823;Dbxref=ASAP:ABE-0012229,UniProtKB/Swiss-Prot:P0A6U5,Genbank:NP_418196.1,EcoGene:EG10376,GeneID:948250;Name=NP_418196.1;Note=glucose-inhibited division%3B chromosome replication?;gbkey=CDS;gene=rsmG;product=16S rRNA m(7)G527 methyltransferase%2C SAM-dependent%3B glucose-inhibited cell-division protein;protein_id=NP_418196.1;transl_table=11 NC_000913.3 RefSeq gene 3923744 3925633 . - . ID=gene3824;Dbxref=EcoGene:EG10375,GeneID:948248;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;gene_synonym=ECK3734,gidA,JW3719,mnmB,trmF;locus_tag=b3741 NC_000913.3 RefSeq CDS 3923744 3925633 . - 0 ID=cds3689;Parent=gene3824;Dbxref=ASAP:ABE-0012231,UniProtKB/Swiss-Prot:P0A6U3,Genbank:NP_418197.1,EcoGene:EG10375,GeneID:948248;Name=NP_418197.1;Note=glucose-inhibited division%3B chromosome replication?;gbkey=CDS;gene=mnmG;product=5-methylaminomethyl-2-thiouridine modification at tRNA U34;protein_id=NP_418197.1;transl_table=11 NC_000913.3 RefSeq region 3925744 3925975 . + . ID=id472;Dbxref=ASAP:ABE-0012233;Note=oriC%3B origin of chromosomal DNA replication%2C bidirectional~oriC%3B b4489%3B ECK3735%3B JWS0001;gbkey=rep_origin NC_000913.3 RefSeq gene 3926012 3926455 . - . ID=gene3825;Dbxref=EcoGene:EG11199,GeneID:948249;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;gene_synonym=ECK3736,JW3720,yieB;locus_tag=b3742 NC_000913.3 RefSeq CDS 3926012 3926455 . - 0 ID=cds3690;Parent=gene3825;Dbxref=ASAP:ABE-0012235,UniProtKB/Swiss-Prot:P03817,Genbank:NP_418198.1,EcoGene:EG11199,GeneID:948249;Name=NP_418198.1;Note=initiation of chromosome replication;gbkey=CDS;gene=mioC;product=FMN-binding protein MioC;protein_id=NP_418198.1;transl_table=11 NC_000913.3 RefSeq gene 3926545 3927003 . - . ID=gene3826;Dbxref=EcoGene:EG10093,GeneID:948259;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;gene_synonym=ECK3737,JW3721;locus_tag=b3743 NC_000913.3 RefSeq CDS 3926545 3927003 . - 0 ID=cds3691;Parent=gene3826;Dbxref=ASAP:ABE-0012237,UniProtKB/Swiss-Prot:P0ACI6,Genbank:NP_418199.1,EcoGene:EG10093,GeneID:948259;Name=NP_418199.1;Note=regulator for asnA%2C asnC and gidA;gbkey=CDS;gene=asnC;product=transcriptional activator of asnA%3B autorepressor;protein_id=NP_418199.1;transl_table=11 NC_000913.3 RefSeq gene 3927155 3928147 . + . ID=gene3827;Dbxref=EcoGene:EG10091,GeneID:948258;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;gene_synonym=ECK3738,JW3722;locus_tag=b3744 NC_000913.3 RefSeq CDS 3927155 3928147 . + 0 ID=cds3692;Parent=gene3827;Dbxref=ASAP:ABE-0012242,UniProtKB/Swiss-Prot:P00963,Genbank:NP_418200.1,EcoGene:EG10091,GeneID:948258;Name=NP_418200.1;gbkey=CDS;gene=asnA;product=asparagine synthetase A;protein_id=NP_418200.1;transl_table=11 NC_000913.3 RefSeq gene 3928152 3929603 . - . ID=gene3828;Dbxref=EcoGene:EG11730,GeneID:948257;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;gene_synonym=ECK3739,JW5610,yieD,yieM;locus_tag=b3745 NC_000913.3 RefSeq CDS 3928152 3929603 . - 0 ID=cds3693;Parent=gene3828;Dbxref=ASAP:ABE-0012244,UniProtKB/Swiss-Prot:P0ADN0,Genbank:YP_026243.1,EcoGene:EG11730,GeneID:948257;Name=YP_026243.1;gbkey=CDS;gene=viaA;product=stimulator of RavA ATPase activity%3B von Willebrand factor domain protein;protein_id=YP_026243.1;transl_table=11 NC_000913.3 RefSeq gene 3929597 3931093 . - . ID=gene3829;Dbxref=EcoGene:EG11731,GeneID:948256;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;gene_synonym=ECK3740,JW3725,yieN;locus_tag=b3746 NC_000913.3 RefSeq CDS 3929597 3931093 . - 0 ID=cds3694;Parent=gene3829;Dbxref=ASAP:ABE-0012247,UniProtKB/Swiss-Prot:P31473,Genbank:NP_418202.4,EcoGene:EG11731,GeneID:948256;Name=NP_418202.4;Note=putative 2-component regulator;gbkey=CDS;gene=ravA;product=hexameric AAA+ MoxR family ATPase%2C putative molecular chaperone;protein_id=NP_418202.4;transl_table=11 NC_000913.3 RefSeq gene 3931316 3933184 . + . ID=gene3830;Dbxref=EcoGene:EG11541,GeneID:948255;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;gene_synonym=ECK3741,JW5609,trkD;locus_tag=b3747 NC_000913.3 RefSeq CDS 3931316 3933184 . + 0 ID=cds3695;Parent=gene3830;Dbxref=ASAP:ABE-0012251,UniProtKB/Swiss-Prot:P63183,Genbank:YP_026244.1,EcoGene:EG11541,GeneID:948255;Name=YP_026244.1;Note=low affinity potassium transport system;gbkey=CDS;gene=kup;product=potassium transporter;protein_id=YP_026244.1;transl_table=11 NC_000913.3 RefSeq gene 3933351 3933770 . + . ID=gene3831;Dbxref=EcoGene:EG10817,GeneID:948267;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;gene_synonym=ECK3742,JW5857,rbsP;locus_tag=b3748 NC_000913.3 RefSeq CDS 3933351 3933770 . + 0 ID=cds3696;Parent=gene3831;Dbxref=ASAP:ABE-0012256,UniProtKB/Swiss-Prot:P04982,Genbank:NP_418204.2,EcoGene:EG10817,GeneID:948267;Name=NP_418204.2;Note=D-ribose high-affinity transport system%3B membrane-associated protein;gbkey=CDS;gene=rbsD;product=D-ribose pyranase;protein_id=NP_418204.2;transl_table=11 NC_000913.3 RefSeq gene 3933778 3935283 . + . ID=gene3832;Dbxref=EcoGene:EG10814,GeneID:948264;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;gene_synonym=ECK3743,JW3728,rbsP,rbsT;locus_tag=b3749 NC_000913.3 RefSeq CDS 3933778 3935283 . + 0 ID=cds3697;Parent=gene3832;Dbxref=ASAP:ABE-0012259,UniProtKB/Swiss-Prot:P04983,Genbank:NP_418205.1,EcoGene:EG10814,GeneID:948264;Name=NP_418205.1;Note=ATP-binding component of D-ribose high-affinity transport system;gbkey=CDS;gene=rbsA;product=D-ribose ABC transporter ATPase;protein_id=NP_418205.1;transl_table=11 NC_000913.3 RefSeq gene 3935288 3936253 . + . ID=gene3833;Dbxref=EcoGene:EG10816,GeneID:948262;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;gene_synonym=ECK3744,JW3729,rbsP,rbsT;locus_tag=b3750 NC_000913.3 RefSeq CDS 3935288 3936253 . + 0 ID=cds3698;Parent=gene3833;Dbxref=ASAP:ABE-0012261,UniProtKB/Swiss-Prot:P0AGI1,Genbank:NP_418206.1,EcoGene:EG10816,GeneID:948262;Name=NP_418206.1;Note=D-ribose high-affinity transport system%3B membrane component of ABC superfamily;gbkey=CDS;gene=rbsC;product=D-ribose ABC transporter permease;protein_id=NP_418206.1;transl_table=11 NC_000913.3 RefSeq gene 3936278 3937168 . + . ID=gene3834;Dbxref=EcoGene:EG10815,GeneID:948261;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;gene_synonym=ECK3745,JW3730,prlB,rbsP;locus_tag=b3751 NC_000913.3 RefSeq CDS 3936278 3937168 . + 0 ID=cds3699;Parent=gene3834;Dbxref=ASAP:ABE-0012264,UniProtKB/Swiss-Prot:P02925,Genbank:NP_418207.1,EcoGene:EG10815,GeneID:948261;Name=NP_418207.1;Note=D-ribose periplasmic binding protein%3B periplasmic-binding compoent of ABC superfamily;gbkey=CDS;gene=rbsB;product=D-ribose ABC transporter periplasmic binding protein%3B ribose chemotaxis receptor;protein_id=NP_418207.1;transl_table=11 NC_000913.3 RefSeq gene 3937294 3938223 . + . ID=gene3835;Dbxref=EcoGene:EG10818,GeneID:948260;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;gene_synonym=ECK3746,JW3731;locus_tag=b3752 NC_000913.3 RefSeq CDS 3937294 3938223 . + 0 ID=cds3700;Parent=gene3835;Dbxref=ASAP:ABE-0012266,UniProtKB/Swiss-Prot:P0A9J6,Genbank:NP_418208.1,EcoGene:EG10818,GeneID:948260;Name=NP_418208.1;gbkey=CDS;gene=rbsK;product=ribokinase;protein_id=NP_418208.1;transl_table=11 NC_000913.3 RefSeq gene 3938227 3939219 . + . ID=gene3836;Dbxref=EcoGene:EG10819,GeneID:948266;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;gene_synonym=ECK3747,JW3732;locus_tag=b3753 NC_000913.3 RefSeq CDS 3938227 3939219 . + 0 ID=cds3701;Parent=gene3836;Dbxref=ASAP:ABE-0012271,UniProtKB/Swiss-Prot:P0ACQ0,Genbank:NP_418209.1,EcoGene:EG10819,GeneID:948266;Name=NP_418209.1;Note=regulator for rbs operon;gbkey=CDS;gene=rbsR;product=transcriptional repressor of ribose metabolism;protein_id=NP_418209.1;transl_table=11 NC_000913.3 RefSeq gene 3939185 3940612 . - . ID=gene3837;Dbxref=EcoGene:EG11732,GeneID:948265;Name=hsrA;gbkey=Gene;gene=hsrA;gene_biotype=protein_coding;gene_synonym=ECK3748,JW3733,yieO;locus_tag=b3754 NC_000913.3 RefSeq CDS 3939185 3940612 . - 0 ID=cds3702;Parent=gene3837;Dbxref=ASAP:ABE-0012273,UniProtKB/Swiss-Prot:P31474,Genbank:NP_418210.1,EcoGene:EG11732,GeneID:948265;Name=NP_418210.1;Note=putative transport protein (MFS family)~high copy suppressor of RspA: relieves RspA-mediated reduction of sigma(S) levels%3B overexpression also reduces MetE activity%3B effect proposed to be via an elevation in levels of homocysteine%2C causing a concomitant increase in homocysteine thiolactone~overexpression has no effect on resistance to a variety of toxic compounds~overexpression has no effect on resistance to a variety of toxic compounds;gbkey=CDS;gene=hsrA;product=putative multidrug or homocysteine efflux system;protein_id=NP_418210.1;transl_table=11 NC_000913.3 RefSeq gene 3940635 3941327 . - . ID=gene3838;Dbxref=EcoGene:EG11733,GeneID:948263;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;gene_synonym=ECK3749,JW5608;locus_tag=b3755 NC_000913.3 RefSeq CDS 3940635 3941327 . - 0 ID=cds3703;Parent=gene3838;Dbxref=ASAP:ABE-0012275,UniProtKB/Swiss-Prot:P31475,Genbank:YP_026245.1,EcoGene:EG11733,GeneID:948263;Name=YP_026245.1;gbkey=CDS;gene=yieP;product=putative transcriptional regulator;protein_id=YP_026245.1;transl_table=11 NC_000913.3 RefSeq gene 3941808 3943349 . + . ID=gene3839;Dbxref=EcoGene:EG30086,GeneID:948270;Name=rrsC;gbkey=Gene;gene=rrsC;gene_biotype=rRNA;gene_synonym=ECK3750,JWR0082;locus_tag=b3756 NC_000913.3 RefSeq rRNA 3941808 3943349 . + . ID=rna134;Parent=gene3839;Dbxref=ASAP:ABE-0012279,EcoGene:EG30086,GeneID:948270;gbkey=rRNA;gene=rrsC;product=16S ribosomal RNA of rrnC operon NC_000913.3 RefSeq exon 3941808 3943349 . + . ID=id473;Parent=rna134;Dbxref=ASAP:ABE-0012279,EcoGene:EG30086,GeneID:948270;gbkey=rRNA;gene=rrsC;product=16S ribosomal RNA of rrnC operon NC_000913.3 RefSeq gene 3943435 3943510 . + . ID=gene3840;Dbxref=EcoGene:EG30033,GeneID:948271;Name=gltU;gbkey=Gene;gene=gltU;gene_biotype=tRNA;gene_synonym=ECK3751,JWR0083,tgtC;locus_tag=b3757 NC_000913.3 RefSeq tRNA 3943435 3943510 . + . ID=rna135;Parent=gene3840;Dbxref=ASAP:ABE-0012281,EcoGene:EG30033,GeneID:948271;Note=anticodon: UUC;gbkey=tRNA;gene=gltU;product=tRNA-Glu NC_000913.3 RefSeq exon 3943435 3943510 . + . ID=id474;Parent=rna135;Dbxref=ASAP:ABE-0012281,EcoGene:EG30033,GeneID:948271;Note=anticodon: UUC;gbkey=tRNA;gene=gltU;product=tRNA-Glu NC_000913.3 RefSeq gene 3943704 3946607 . + . ID=gene3841;Dbxref=EcoGene:EG30079,GeneID:948268;Name=rrlC;gbkey=Gene;gene=rrlC;gene_biotype=rRNA;gene_synonym=ECK3752,JWR0084;locus_tag=b3758 NC_000913.3 RefSeq rRNA 3943704 3946607 . + . ID=rna136;Parent=gene3841;Dbxref=ASAP:ABE-0012283,EcoGene:EG30079,GeneID:948268;gbkey=rRNA;gene=rrlC;product=23S ribosomal RNA of rrnC operon NC_000913.3 RefSeq exon 3943704 3946607 . + . ID=id475;Parent=rna136;Dbxref=ASAP:ABE-0012283,EcoGene:EG30079,GeneID:948268;gbkey=rRNA;gene=rrlC;product=23S ribosomal RNA of rrnC operon NC_000913.3 RefSeq gene 3946700 3946819 . + . ID=gene3842;Dbxref=EcoGene:EG30072,GeneID:948273;Name=rrfC;gbkey=Gene;gene=rrfC;gene_biotype=rRNA;gene_synonym=ECK3753,JWR0085;locus_tag=b3759 NC_000913.3 RefSeq rRNA 3946700 3946819 . + . ID=rna137;Parent=gene3842;Dbxref=ASAP:ABE-0012285,EcoGene:EG30072,GeneID:948273;gbkey=rRNA;gene=rrfC;product=5S ribosomal RNA of rrnC operon NC_000913.3 RefSeq exon 3946700 3946819 . + . ID=id476;Parent=rna137;Dbxref=ASAP:ABE-0012285,EcoGene:EG30072,GeneID:948273;gbkey=rRNA;gene=rrfC;product=5S ribosomal RNA of rrnC operon NC_000913.3 RefSeq gene 3946872 3946948 . + . ID=gene3843;Dbxref=EcoGene:EG30023,GeneID:948276;Name=aspT;gbkey=Gene;gene=aspT;gene_biotype=tRNA;gene_synonym=ECK3754,JWR0086,tasC;locus_tag=b3760 NC_000913.3 RefSeq tRNA 3946872 3946948 . + . ID=rna138;Parent=gene3843;Dbxref=ASAP:ABE-0012287,EcoGene:EG30023,GeneID:948276;Note=anticodon: GUC;gbkey=tRNA;gene=aspT;product=tRNA-Asp NC_000913.3 RefSeq exon 3946872 3946948 . + . ID=id477;Parent=rna138;Dbxref=ASAP:ABE-0012287,EcoGene:EG30023,GeneID:948276;Note=anticodon: GUC;gbkey=tRNA;gene=aspT;product=tRNA-Asp NC_000913.3 RefSeq gene 3946957 3947032 . + . ID=gene3844;Dbxref=EcoGene:EG30105,GeneID:948275;Name=trpT;gbkey=Gene;gene=trpT;gene_biotype=tRNA;gene_synonym=ECK3755,JWR0087,su7,su8,su9,supU,supV;locus_tag=b3761 NC_000913.3 RefSeq tRNA 3946957 3947032 . + . ID=rna139;Parent=gene3844;Dbxref=ASAP:ABE-0012289,EcoGene:EG30105,GeneID:948275;Note=anticodon: CCA;gbkey=tRNA;gene=trpT;product=tRNA-Trp NC_000913.3 RefSeq exon 3946957 3947032 . + . ID=id478;Parent=rna139;Dbxref=ASAP:ABE-0012289,EcoGene:EG30105,GeneID:948275;Note=anticodon: CCA;gbkey=tRNA;gene=trpT;product=tRNA-Trp NC_000913.3 RefSeq gene 3947128 3947967 . - . ID=gene3845;Dbxref=EcoGene:EG11449,GeneID:2847698;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;gene_synonym=apeR?,ECK3756,JW5607,yifA,yifD;locus_tag=b4480 NC_000913.3 RefSeq CDS 3947128 3947967 . - 0 ID=cds3704;Parent=gene3845;Dbxref=ASAP:ABE-0174109,UniProtKB/Swiss-Prot:P0A8R9,Genbank:YP_026246.1,EcoGene:EG11449,GeneID:2847698;Name=YP_026246.1;Note=transcriptional regulator of the flhDC operon;gbkey=CDS;gene=hdfR;product=flhDC operon transcriptional repressor;protein_id=YP_026246.1;transl_table=11 NC_000913.3 RefSeq gene 3948086 3948424 . + . ID=gene3846;Dbxref=EcoGene:EG11450,GeneID:948274;Name=yifE;gbkey=Gene;gene=yifE;gene_biotype=protein_coding;gene_synonym=ECK3757,JW3737;locus_tag=b3764 NC_000913.3 RefSeq CDS 3948086 3948424 . + 0 ID=cds3705;Parent=gene3846;Dbxref=ASAP:ABE-0012298,UniProtKB/Swiss-Prot:P0ADN2,Genbank:NP_418213.1,EcoGene:EG11450,GeneID:948274;Name=NP_418213.1;gbkey=CDS;gene=yifE;product=UPF0438 family protein;protein_id=NP_418213.1;transl_table=11 NC_000913.3 RefSeq gene 3948449 3949969 . - . ID=gene3847;Dbxref=EcoGene:EG11260,GeneID:948282;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;gene_synonym=ECK3758,JW3738;locus_tag=b3765 NC_000913.3 RefSeq CDS 3948449 3949969 . - 0 ID=cds3706;Parent=gene3847;Dbxref=ASAP:ABE-0012300,UniProtKB/Swiss-Prot:P22787,Genbank:NP_418214.2,EcoGene:EG11260,GeneID:948282;Name=NP_418214.2;Note=putative 2-component regulator;gbkey=CDS;gene=yifB;product=magnesium chelatase family protein and putative transcriptional regulator;protein_id=NP_418214.2;transl_table=11 NC_000913.3 RefSeq gene 3950322 3950420 . + . ID=gene3848;Dbxref=EcoGene:EG11270,GeneID:948283;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;gene_synonym=ECK3759,JW3739;locus_tag=b3766 NC_000913.3 RefSeq CDS 3950322 3950420 . + 0 ID=cds3707;Parent=gene3848;Dbxref=ASAP:ABE-0012307,UniProtKB/Swiss-Prot:P62522,Genbank:NP_418215.1,EcoGene:EG11270,GeneID:948283;Name=NP_418215.1;Note=ilvGEDA operon leader peptide;gbkey=CDS;gene=ilvL;product=ilvG operon leader peptide;protein_id=NP_418215.1;transl_table=11 NC_000913.3 RefSeq gene 3950507 3950557 . + . ID=gene3849;Dbxref=EcoGene:EG14474,GeneID:7751639;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;gene_synonym=ECK4484;locus_tag=b4669 NC_000913.3 RefSeq CDS 3950507 3950557 . + 0 ID=cds3708;Parent=gene3849;Dbxref=UniProtKB/Swiss-Prot:C1P619,Genbank:YP_002791259.1,EcoGene:EG14474,GeneID:7751639;Name=YP_002791259.1;gbkey=CDS;gene=ilvX;product=uncharacterized protein;protein_id=YP_002791259.1;transl_table=11 NC_000913.3 RefSeq gene 3950560 3952204 . + . ID=gene3850;Dbxref=EcoGene:EG10498,GeneID:2847699;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=pseudogene;gene_synonym=ECK3760,ilvO,JW3740,JW3741;locus_tag=b4488;pseudo=true NC_000913.3 RefSeq CDS 3950560 3951543 . + 0 ID=cds3709;Parent=gene3850;Dbxref=ASAP:ABE-0012309,ASAP:ABE-0012311,ASAP:ABE-0174552,UniProtKB/Swiss-Prot:P00892,EcoGene:EG10498,GeneID:2847699;Note=pseudogene%2C acetolactate synthase 2 large subunit%2C valine-insensitive~acetolactate synthase II%2C large subunit%2C cryptic%2C interrupted;gbkey=CDS;gene=ilvG;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3951542 3952204 . + 0 ID=cds3709;Parent=gene3850;Dbxref=ASAP:ABE-0012309,ASAP:ABE-0012311,ASAP:ABE-0174552,UniProtKB/Swiss-Prot:P00892,EcoGene:EG10498,GeneID:2847699;Note=pseudogene%2C acetolactate synthase 2 large subunit%2C valine-insensitive~acetolactate synthase II%2C large subunit%2C cryptic%2C interrupted;gbkey=CDS;gene=ilvG;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3952201 3952464 . + . ID=gene3851;Dbxref=EcoGene:EG10501,GeneID:948279;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;gene_synonym=ECK3761,JW3742;locus_tag=b3769 NC_000913.3 RefSeq CDS 3952201 3952464 . + 0 ID=cds3710;Parent=gene3851;Dbxref=ASAP:ABE-0012313,UniProtKB/Swiss-Prot:P0ADG1,Genbank:NP_418217.1,EcoGene:EG10501,GeneID:948279;Name=NP_418217.1;Note=acetolactate synthase II%2C valine insensitive%2C small subunit;gbkey=CDS;gene=ilvM;product=acetolactate synthase 2 small subunit;protein_id=NP_418217.1;transl_table=11 NC_000913.3 RefSeq gene 3952484 3953413 . + . ID=gene3852;Dbxref=EcoGene:EG10497,GeneID:948278;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;gene_synonym=ECK3762,JW5606;locus_tag=b3770 NC_000913.3 RefSeq CDS 3952484 3953413 . + 0 ID=cds3711;Parent=gene3852;Dbxref=ASAP:ABE-0012316,UniProtKB/Swiss-Prot:P0AB80,Genbank:YP_026247.1,EcoGene:EG10497,GeneID:948278;Name=YP_026247.1;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=YP_026247.1;transl_table=11 NC_000913.3 RefSeq gene 3953478 3955328 . + . ID=gene3853;Dbxref=EcoGene:EG10496,GeneID:948277;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;gene_synonym=ECK3763,JW5605;locus_tag=b3771 NC_000913.3 RefSeq CDS 3953478 3955328 . + 0 ID=cds3712;Parent=gene3853;Dbxref=ASAP:ABE-0012318,UniProtKB/Swiss-Prot:P05791,Genbank:YP_026248.1,EcoGene:EG10496,GeneID:948277;Name=YP_026248.1;gbkey=CDS;gene=ilvD;product=dihydroxyacid dehydratase;protein_id=YP_026248.1;transl_table=11 NC_000913.3 RefSeq gene 3955331 3956875 . + . ID=gene3854;Dbxref=EcoGene:EG10493,GeneID:948287;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;gene_synonym=ECK3764,JW3745;locus_tag=b3772 NC_000913.3 RefSeq CDS 3955331 3956875 . + 0 ID=cds3713;Parent=gene3854;Dbxref=ASAP:ABE-0012321,UniProtKB/Swiss-Prot:P04968,Genbank:NP_418220.1,EcoGene:EG10493,GeneID:948287;Name=NP_418220.1;Note=threonine deaminase (dehydratase);gbkey=CDS;gene=ilvA;product=l-threonine dehydratase%2C biosynthetic%3B also known as threonine deaminase;protein_id=NP_418220.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3956884 3956909 . + . ID=id479;Note=REP285 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3956927 3957820 . - . ID=gene3855;Dbxref=EcoGene:EG10503,GeneID:948284;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;gene_synonym=ECK3765,JW3746;locus_tag=b3773 NC_000913.3 RefSeq CDS 3956927 3957820 . - 0 ID=cds3714;Parent=gene3855;Dbxref=ASAP:ABE-0012323,UniProtKB/Swiss-Prot:P05827,Genbank:NP_418221.1,EcoGene:EG10503,GeneID:948284;Name=NP_418221.1;Note=positive regulator for ilvC;gbkey=CDS;gene=ilvY;product=transcriptional activator of ilvC%3B autorepressor;protein_id=NP_418221.1;transl_table=11 NC_000913.3 RefSeq gene 3957970 3959445 . + . ID=gene3856;Dbxref=EcoGene:EG10495,GeneID:948286;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;gene_synonym=ECK3766,JW3747;locus_tag=b3774 NC_000913.3 RefSeq CDS 3957970 3959445 . + 0 ID=cds3715;Parent=gene3856;Dbxref=ASAP:ABE-0012331,UniProtKB/Swiss-Prot:P05793,Genbank:NP_418222.1,EcoGene:EG10495,GeneID:948286;Name=NP_418222.1;Note=ketol-acid reductoisomerase;gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase%2C NAD(P)-binding;protein_id=NP_418222.1;transl_table=11 NC_000913.3 RefSeq gene 3959532 3959813 . - . ID=gene3857;Dbxref=EcoGene:EG12352,GeneID:948285;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;gene_synonym=ECK3767,JW3748,parvA;locus_tag=b3775 NC_000913.3 RefSeq CDS 3959532 3959813 . - 0 ID=cds3716;Parent=gene3857;Dbxref=ASAP:ABE-0012334,UniProtKB/Swiss-Prot:P0A9L5,Genbank:NP_418223.1,EcoGene:EG12352,GeneID:948285;Name=NP_418223.1;gbkey=CDS;gene=ppiC;product=peptidyl-prolyl cis-trans isomerase C (rotamase C);protein_id=NP_418223.1;transl_table=11 NC_000913.3 RefSeq gene 3960012 3960460 . - . ID=gene3858;Dbxref=EcoGene:EG14339,GeneID:2847676;Name=yifN;gbkey=Gene;gene=yifN;gene_biotype=pseudogene;gene_synonym=ECK3768,JW3749,yifO;locus_tag=b3777;pseudo=true NC_000913.3 RefSeq CDS 3960254 3960460 . - 0 ID=cds3717;Parent=gene3858;Dbxref=ASAP:ABE-0012338,ASAP:ABE-0012340,UniProtKB/Swiss-Prot:P56259,EcoGene:EG14339,GeneID:2847676;Note=PemK toxin family pseudogene;gbkey=CDS;gene=yifN;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 3960012 3960254 . - 0 ID=cds3717;Parent=gene3858;Dbxref=ASAP:ABE-0012338,ASAP:ABE-0012340,UniProtKB/Swiss-Prot:P56259,EcoGene:EG14339,GeneID:2847676;Note=PemK toxin family pseudogene;gbkey=CDS;gene=yifN;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 3960677 3962698 . + . ID=gene3859;Dbxref=EcoGene:EG10837,GeneID:948292;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;gene_synonym=dasC,ECK3770,JW5604,mbrA,mmrA?;locus_tag=b3778 NC_000913.3 RefSeq CDS 3960677 3962698 . + 0 ID=cds3718;Parent=gene3859;Dbxref=ASAP:ABE-0012344,UniProtKB/Swiss-Prot:P09980,Genbank:YP_026251.1,EcoGene:EG10837,GeneID:948292;Name=YP_026251.1;Note=rep helicase%2C a single-stranded DNA dependent ATPase;gbkey=CDS;gene=rep;product=DNA helicase and single-stranded DNA-dependent ATPase;protein_id=YP_026251.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3962700 3962735 . + . ID=id480;Note=REP286 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 3962745 3964229 . - . ID=gene3860;Dbxref=EcoGene:EG10413,GeneID:948291;Name=gpp;gbkey=Gene;gene=gpp;gene_biotype=protein_coding;gene_synonym=ECK3771,gppA,JW5603;locus_tag=b3779 NC_000913.3 RefSeq CDS 3962745 3964229 . - 0 ID=cds3719;Parent=gene3860;Dbxref=ASAP:ABE-0012347,UniProtKB/Swiss-Prot:P25552,Genbank:YP_026252.1,EcoGene:EG10413,GeneID:948291;Name=YP_026252.1;Note=guanosine pentaphosphatase%3B exopolyphosphatase;gbkey=CDS;gene=gpp;product=guanosine pentaphosphatase/exopolyphosphatase;protein_id=YP_026252.1;transl_table=11 NC_000913.3 RefSeq gene 3964365 3965630 . - . ID=gene3861;Dbxref=EcoGene:EG10844,GeneID:948290;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;gene_synonym=ECK3772,JW3753,mmrA?;locus_tag=b3780 NC_000913.3 RefSeq CDS 3964365 3965630 . - 0 ID=cds3720;Parent=gene3861;Dbxref=ASAP:ABE-0012351,UniProtKB/Swiss-Prot:P0A8J8,Genbank:NP_418227.1,EcoGene:EG10844,GeneID:948290;Name=NP_418227.1;Note=putative ATP-dependent RNA helicase;gbkey=CDS;gene=rhlB;product=ATP-dependent RNA helicase;protein_id=NP_418227.1;transl_table=11 NC_000913.3 RefSeq gene 3965761 3966090 . + . ID=gene3862;Dbxref=EcoGene:EG11031,GeneID:948289;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;gene_synonym=dasC,ECK3773,fip,fipA,JW5856,tsnC;locus_tag=b3781 NC_000913.3 RefSeq CDS 3965761 3966090 . + 0 ID=cds3721;Parent=gene3862;Dbxref=ASAP:ABE-0012357,UniProtKB/Swiss-Prot:P0AA25,Genbank:NP_418228.2,EcoGene:EG11031,GeneID:948289;Name=NP_418228.2;gbkey=CDS;gene=trxA;product=thioredoxin 1;protein_id=NP_418228.2;transl_table=11 NC_000913.3 RefSeq gene 3966417 3967676 . + . ID=gene3863;Dbxref=EcoGene:EG10845,GeneID:948297;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;gene_synonym=ECK3775,hdf,JW3756,nitA,nusD,psuA,rnsC,sbaA,sun,tabC,tsu;locus_tag=b3783 NC_000913.3 RefSeq CDS 3966417 3967676 . + 0 ID=cds3722;Parent=gene3863;Dbxref=ASAP:ABE-0012362,UniProtKB/Swiss-Prot:P0AG30,Genbank:NP_418230.1,EcoGene:EG10845,GeneID:948297;Name=NP_418230.1;Note=transcription termination factor Rho%3B polarity suppressor;gbkey=CDS;gene=rho;product=transcription termination factor;protein_id=NP_418230.1;transl_table=11 NC_000913.3 RefSeq gene 3967916 3969019 . + . ID=gene3864;Dbxref=EcoGene:EG10840,GeneID:948789;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;gene_synonym=ECK3776,JW3758,rfe;locus_tag=b3784 NC_000913.3 RefSeq CDS 3967916 3969019 . + 0 ID=cds3723;Parent=gene3864;Dbxref=ASAP:ABE-0012366,UniProtKB/Swiss-Prot:P0AC78,Genbank:NP_418231.1,EcoGene:EG10840,GeneID:948789;Name=NP_418231.1;gbkey=CDS;gene=wecA;product=UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase;protein_id=NP_418231.1;transl_table=11 NC_000913.3 RefSeq gene 3969031 3970077 . + . ID=gene3865;Dbxref=EcoGene:EG11295,GeneID:944815;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;gene_synonym=ECK3777,JW5601,metNSt,wzz,yifC;locus_tag=b3785 NC_000913.3 RefSeq CDS 3969031 3970077 . + 0 ID=cds3724;Parent=gene3865;Dbxref=ASAP:ABE-0012370,UniProtKB/Swiss-Prot:P0AG00,Genbank:NP_418232.2,EcoGene:EG11295,GeneID:944815;Name=NP_418232.2;Note=modulator of enterobacterial common antigen (ECA) polysaccharide chain length;gbkey=CDS;gene=wzzE;product=Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;protein_id=NP_418232.2;transl_table=11 NC_000913.3 RefSeq gene 3970133 3971263 . + . ID=gene3866;Dbxref=EcoGene:EG11451,GeneID:944789;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;gene_synonym=ECK3778,JW5600,nfrC,rffE,yifF;locus_tag=b3786 NC_000913.3 RefSeq CDS 3970133 3971263 . + 0 ID=cds3725;Parent=gene3866;Dbxref=ASAP:ABE-0012372,UniProtKB/Swiss-Prot:P27828,Genbank:YP_026253.1,EcoGene:EG11451,GeneID:944789;Name=YP_026253.1;gbkey=CDS;gene=wecB;product=UDP-N-acetyl glucosamine-2-epimerase;protein_id=YP_026253.1;transl_table=11 NC_000913.3 RefSeq gene 3971260 3972522 . + . ID=gene3867;Dbxref=EcoGene:EG11452,GeneID:948977;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;gene_synonym=ECK3779,JW5599,rff,rffD;locus_tag=b3787 NC_000913.3 RefSeq CDS 3971260 3972522 . + 0 ID=cds3726;Parent=gene3867;Dbxref=ASAP:ABE-0012374,UniProtKB/Swiss-Prot:P27829,Genbank:YP_026254.1,EcoGene:EG11452,GeneID:948977;Name=YP_026254.1;Note=UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase%3B synthesis of enterobacterial common antigen (ECA);gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase;protein_id=YP_026254.1;transl_table=11 NC_000913.3 RefSeq gene 3972522 3973589 . + . ID=gene3868;Dbxref=EcoGene:EG11453,GeneID:948300;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;gene_synonym=ECK3780,JW5598,rff;locus_tag=b3788 NC_000913.3 RefSeq CDS 3972522 3973589 . + 0 ID=cds3727;Parent=gene3868;Dbxref=ASAP:ABE-0012376,UniProtKB/Swiss-Prot:P27830,Genbank:YP_026255.1,EcoGene:EG11453,GeneID:948300;Name=YP_026255.1;gbkey=CDS;gene=rffG;product=dTDP-glucose 4%2C6-dehydratase;protein_id=YP_026255.1;transl_table=11 NC_000913.3 RefSeq gene 3973608 3974489 . + . ID=gene3869;Dbxref=EcoGene:EG11454,GeneID:948299;Name=rffH;gbkey=Gene;gene=rffH;gene_biotype=protein_coding;gene_synonym=ECK3781,JW3763,yifG;locus_tag=b3789 NC_000913.3 RefSeq CDS 3973608 3974489 . + 0 ID=cds3728;Parent=gene3869;Dbxref=ASAP:ABE-0012379,UniProtKB/Swiss-Prot:P61887,Genbank:NP_418236.1,EcoGene:EG11454,GeneID:948299;Name=NP_418236.1;gbkey=CDS;gene=rffH;product=glucose-1-phosphate thymidylyltransferase;protein_id=NP_418236.1;transl_table=11 NC_000913.3 RefSeq gene 3974467 3975141 . + . ID=gene3870;Dbxref=EcoGene:EG11455,GeneID:948298;Name=wecD;gbkey=Gene;gene=wecD;gene_biotype=protein_coding;gene_synonym=ECK3782,JW5597,rff,rffC,yifH;locus_tag=b3790 NC_000913.3 RefSeq CDS 3974467 3975141 . + 0 ID=cds3729;Parent=gene3870;Dbxref=ASAP:ABE-0012382,UniProtKB/Swiss-Prot:P27832,Genbank:YP_026256.2,EcoGene:EG11455,GeneID:948298;Name=YP_026256.2;Note=putative acyltransferase%2C lipopolysaccharide biosynthesis protein;gbkey=CDS;gene=wecD;product=TDP-fucosamine acetyltransferase;protein_id=YP_026256.2;transl_table=11 NC_000913.3 RefSeq gene 3975146 3976276 . + . ID=gene3871;Dbxref=EcoGene:EG11456,GeneID:948296;Name=wecE;gbkey=Gene;gene=wecE;gene_biotype=protein_coding;gene_synonym=ECK3783,JW3765,rff,rffA,yifI;locus_tag=b3791 NC_000913.3 RefSeq CDS 3975146 3976276 . + 0 ID=cds3730;Parent=gene3871;Dbxref=ASAP:ABE-0012384,UniProtKB/Swiss-Prot:P27833,Genbank:NP_418238.1,EcoGene:EG11456,GeneID:948296;Name=NP_418238.1;gbkey=CDS;gene=wecE;product=TDP-4-oxo-6-deoxy-D-glucose transaminase;protein_id=NP_418238.1;transl_table=11 NC_000913.3 RefSeq gene 3976278 3977528 . + . ID=gene3872;Dbxref=EcoGene:EG11486,GeneID:948294;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;gene_synonym=ECK3784,JW3766,wzx,yifJ;locus_tag=b3792 NC_000913.3 RefSeq CDS 3976278 3977528 . + 0 ID=cds3731;Parent=gene3872;Dbxref=ASAP:ABE-0012386,UniProtKB/Swiss-Prot:P0AAA7,Genbank:NP_418239.1,EcoGene:EG11486,GeneID:948294;Name=NP_418239.1;Note=O-antigen translocase in LPS biosynthesis;gbkey=CDS;gene=wzxE;product=O-antigen translocase;protein_id=NP_418239.1;transl_table=11 NC_000913.3 RefSeq gene 3977525 3978604 . + . ID=gene3873;Dbxref=EcoGene:EG14320,GeneID:2847677;Name=wecF;gbkey=Gene;gene=wecF;gene_biotype=protein_coding;gene_synonym=ECK3785,JW5596,rff,rffT,yifM;locus_tag=b4481 NC_000913.3 RefSeq CDS 3977525 3978604 . + 0 ID=cds3732;Parent=gene3873;Dbxref=ASAP:ABE-0174115,UniProtKB/Swiss-Prot:P56258,Genbank:YP_026257.1,EcoGene:EG14320,GeneID:2847677;Name=YP_026257.1;Note=TDP-Fuc4NAc:lipidII transferase;gbkey=CDS;gene=wecF;product=TDP-Fuc4NAc:lipidIIFuc4NAc transferase;protein_id=YP_026257.1;transl_table=11 NC_000913.3 RefSeq gene 3978601 3979953 . + . ID=gene3874;Dbxref=EcoGene:EG11457,GeneID:948293;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;gene_synonym=ECK3786,JW3769,rffT;locus_tag=b3793 NC_000913.3 RefSeq CDS 3978601 3979953 . + 0 ID=cds3733;Parent=gene3874;Dbxref=ASAP:ABE-0012392,UniProtKB/Swiss-Prot:P27835,Genbank:NP_418241.1,EcoGene:EG11457,GeneID:948293;Name=NP_418241.1;Note=putative ECA polymerization protein;gbkey=CDS;gene=wzyE;product=putative ECA polysaccharide chain elongation protein;protein_id=NP_418241.1;transl_table=11 NC_000913.3 RefSeq gene 3979956 3980696 . + . ID=gene3875;Dbxref=EcoGene:EG11458,GeneID:948301;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;gene_synonym=ECK3787,JW3770,rff,rffM;locus_tag=b3794 NC_000913.3 RefSeq CDS 3979956 3980696 . + 0 ID=cds3734;Parent=gene3875;Dbxref=ASAP:ABE-0012394,UniProtKB/Swiss-Prot:P27836,Genbank:NP_418242.1,EcoGene:EG11458,GeneID:948301;Name=NP_418242.1;Note=probable UDP-N-acetyl-D-mannosaminuronic acid transferase%3B synthesis of enterobacterial common antigen (ECA);gbkey=CDS;gene=wecG;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=NP_418242.1;transl_table=11 NC_000913.3 RefSeq gene 3980887 3982272 . + . ID=gene3876;Dbxref=EcoGene:EG11459,GeneID:945400;Name=yifK;gbkey=Gene;gene=yifK;gene_biotype=protein_coding;gene_synonym=ECK3788,JW5595;locus_tag=b3795 NC_000913.3 RefSeq CDS 3980887 3982272 . + 0 ID=cds3735;Parent=gene3876;Dbxref=ASAP:ABE-0012397,UniProtKB/Swiss-Prot:P27837,Genbank:YP_026258.1,EcoGene:EG11459,GeneID:945400;Name=YP_026258.1;Note=putative amino acid/amine transport protein;gbkey=CDS;gene=yifK;product=putative APC family amino acid transporter;protein_id=YP_026258.1;transl_table=11 NC_000913.3 RefSeq gene 3982375 3982451 . + . ID=gene3877;Dbxref=EcoGene:EG30017,GeneID:945107;Name=argX;gbkey=Gene;gene=argX;gene_biotype=tRNA;gene_synonym=ECK3789,JWR0088;locus_tag=b3796 NC_000913.3 RefSeq tRNA 3982375 3982451 . + . ID=rna140;Parent=gene3877;Dbxref=ASAP:ABE-0012399,EcoGene:EG30017,GeneID:945107;Note=anticodon: CCG;gbkey=tRNA;gene=argX;product=tRNA-Arg NC_000913.3 RefSeq exon 3982375 3982451 . + . ID=id481;Parent=rna140;Dbxref=ASAP:ABE-0012399,EcoGene:EG30017,GeneID:945107;Note=anticodon: CCG;gbkey=tRNA;gene=argX;product=tRNA-Arg NC_000913.3 RefSeq gene 3982509 3982585 . + . ID=gene3878;Dbxref=EcoGene:EG30042,GeneID:948305;Name=hisR;gbkey=Gene;gene=hisR;gene_biotype=tRNA;gene_synonym=ECK3790,JWR0089;locus_tag=b3797 NC_000913.3 RefSeq tRNA 3982509 3982585 . + . ID=rna141;Parent=gene3878;Dbxref=ASAP:ABE-0012401,EcoGene:EG30042,GeneID:948305;Note=anticodon: GUG;gbkey=tRNA;gene=hisR;product=tRNA-His NC_000913.3 RefSeq exon 3982509 3982585 . + . ID=id482;Parent=rna141;Dbxref=ASAP:ABE-0012401,EcoGene:EG30042,GeneID:948305;Note=anticodon: GUG;gbkey=tRNA;gene=hisR;product=tRNA-His NC_000913.3 RefSeq gene 3982606 3982692 . + . ID=gene3879;Dbxref=EcoGene:EG30049,GeneID:948304;Name=leuT;gbkey=Gene;gene=leuT;gene_biotype=tRNA;gene_synonym=ECK3791,JWR0090;locus_tag=b3798 NC_000913.3 RefSeq tRNA 3982606 3982692 . + . ID=rna142;Parent=gene3879;Dbxref=ASAP:ABE-0012403,EcoGene:EG30049,GeneID:948304;Note=anticodon: CAG;gbkey=tRNA;gene=leuT;product=tRNA-Leu NC_000913.3 RefSeq exon 3982606 3982692 . + . ID=id483;Parent=rna142;Dbxref=ASAP:ABE-0012403,EcoGene:EG30049,GeneID:948304;Note=anticodon: CAG;gbkey=tRNA;gene=leuT;product=tRNA-Leu NC_000913.3 RefSeq gene 3982735 3982811 . + . ID=gene3880;Dbxref=EcoGene:EG30068,GeneID:948303;Name=proM;gbkey=Gene;gene=proM;gene_biotype=tRNA;gene_synonym=ECK3792,JWR0091,proU;locus_tag=b3799 NC_000913.3 RefSeq tRNA 3982735 3982811 . + . ID=rna143;Parent=gene3880;Dbxref=ASAP:ABE-0012405,EcoGene:EG30068,GeneID:948303;Note=anticodon: UGG;gbkey=tRNA;gene=proM;product=tRNA-Pro NC_000913.3 RefSeq exon 3982735 3982811 . + . ID=id484;Parent=rna143;Dbxref=ASAP:ABE-0012405,EcoGene:EG30068,GeneID:948303;Note=anticodon: UGG;gbkey=tRNA;gene=proM;product=tRNA-Pro NC_000913.3 RefSeq gene 3982958 3984193 . + . ID=gene3881;Dbxref=EcoGene:EG10090,GeneID:949013;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;gene_synonym=atsB,ECK3793,gppB,JW5594;locus_tag=b3800 NC_000913.3 RefSeq CDS 3982958 3984193 . + 0 ID=cds3736;Parent=gene3881;Dbxref=ASAP:ABE-0012408,UniProtKB/Swiss-Prot:P25550,Genbank:YP_026259.1,EcoGene:EG10090,GeneID:949013;Name=YP_026259.1;Note=putative arylsulfatase regulator;gbkey=CDS;gene=aslB;product=putative AslA-specific sulfatase-maturating enzyme;protein_id=YP_026259.1;transl_table=11 NC_000913.3 RefSeq repeat_region 3984220 3984323 . + . ID=id485;Note=RIP287 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 3984352 3986007 . - . ID=gene3882;Dbxref=EcoGene:EG10089,GeneID:949015;Name=aslA;gbkey=Gene;gene=aslA;gene_biotype=protein_coding;gene_synonym=atsA,ECK3794,gppB,JW3773;locus_tag=b3801 NC_000913.3 RefSeq CDS 3984352 3986007 . - 0 ID=cds3737;Parent=gene3882;Dbxref=ASAP:ABE-0012411,UniProtKB/Swiss-Prot:P25549,Genbank:NP_418245.1,EcoGene:EG10089,GeneID:949015;Name=NP_418245.1;Note=arylsulfatase;gbkey=CDS;gene=aslA;product=putative Ser-type periplasmic non-aryl sulfatase;protein_id=NP_418245.1;transl_table=11 NC_000913.3 RefSeq gene 3986432 3986638 . + . ID=gene3883;Dbxref=EcoGene:EG31165,GeneID:2847678;Name=glmZ;gbkey=Gene;gene=glmZ;gene_biotype=antisense_RNA;gene_synonym=ECK3795,JWR0257,k19,psrA20,ryiA,sraJ;locus_tag=b4456 NC_000913.3 RefSeq ncRNA 3986432 3986638 . + . ID=rna144;Parent=gene3883;Dbxref=ASAP:ABE-0047274,EcoGene:EG31165,GeneID:2847678;Note=identified in a large scale screen;gbkey=ncRNA;gene=glmZ;ncrna_class=antisense_RNA;product=sRNA antisense activator of glmS mRNA%2C Hfq-dependent NC_000913.3 RefSeq exon 3986432 3986638 . + . ID=id486;Parent=rna144;Dbxref=ASAP:ABE-0047274,EcoGene:EG31165,GeneID:2847678;Note=identified in a large scale screen;gbkey=ncRNA;gene=glmZ;ncrna_class=antisense_RNA;product=sRNA antisense activator of glmS mRNA%2C Hfq-dependent NC_000913.3 RefSeq gene 3986686 3987882 . - . ID=gene3884;Dbxref=EcoGene:EG10434,GeneID:948311;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;gene_synonym=ECK3796,JW3774;locus_tag=b3802 NC_000913.3 RefSeq CDS 3986686 3987882 . - 0 ID=cds3738;Parent=gene3884;Dbxref=ASAP:ABE-0012417,UniProtKB/Swiss-Prot:P0ACB7,Genbank:NP_418246.1,EcoGene:EG10434,GeneID:948311;Name=NP_418246.1;Note=a late step of protoheme IX synthesis;gbkey=CDS;gene=hemY;product=putative protoheme IX synthesis protein;protein_id=NP_418246.1;transl_table=11 NC_000913.3 RefSeq gene 3987885 3989066 . - . ID=gene3885;Dbxref=EcoGene:EG10433,GeneID:948446;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;gene_synonym=ECK3797,JW3775;locus_tag=b3803 NC_000913.3 RefSeq CDS 3987885 3989066 . - 0 ID=cds3739;Parent=gene3885;Dbxref=ASAP:ABE-0012419,UniProtKB/Swiss-Prot:P09127,Genbank:NP_418247.1,EcoGene:EG10433,GeneID:948446;Name=NP_418247.1;Note=uroporphyrinogen III methylase;gbkey=CDS;gene=hemX;product=putative uroporphyrinogen III methyltransferase;protein_id=NP_418247.1;transl_table=11 NC_000913.3 RefSeq gene 3989088 3989828 . - . ID=gene3886;Dbxref=EcoGene:EG10430,GeneID:948587;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;gene_synonym=ECK3798,JW3776;locus_tag=b3804 NC_000913.3 RefSeq CDS 3989088 3989828 . - 0 ID=cds3740;Parent=gene3886;Dbxref=ASAP:ABE-0012425,UniProtKB/Swiss-Prot:P09126,Genbank:NP_418248.1,EcoGene:EG10430,GeneID:948587;Name=NP_418248.1;gbkey=CDS;gene=hemD;product=uroporphyrinogen III synthase;protein_id=NP_418248.1;transl_table=11 NC_000913.3 RefSeq gene 3989825 3990766 . - . ID=gene3887;Dbxref=EcoGene:EG10429,GeneID:947759;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;gene_synonym=ECK3799,JW5932,popE;locus_tag=b3805 NC_000913.3 RefSeq CDS 3989825 3990766 . - 0 ID=cds3741;Parent=gene3887;Dbxref=ASAP:ABE-0012427,UniProtKB/Swiss-Prot:P06983,Genbank:YP_026260.1,EcoGene:EG10429,GeneID:947759;Name=YP_026260.1;Note=porphobilinogen deaminase %3D hydroxymethylbilane synthase;gbkey=CDS;gene=hemC;product=hydroxymethylbilane synthase;protein_id=YP_026260.1;transl_table=11 NC_000913.3 RefSeq gene 3991153 3993699 . + . ID=gene3888;Dbxref=EcoGene:EG10170,GeneID:947755;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;gene_synonym=cya,ECK3800,JW3778;locus_tag=b3806 NC_000913.3 RefSeq CDS 3991153 3993699 . + 0 ID=cds3742;Parent=gene3888;Dbxref=ASAP:ABE-0012432,UniProtKB/Swiss-Prot:P00936,Genbank:NP_418250.1,EcoGene:EG10170,GeneID:947755;Name=NP_418250.1;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=NP_418250.1;transl_table=11 NC_000913.3 RefSeq gene 3993739 3994059 . - . ID=gene3889;Dbxref=EcoGene:EG11653,GeneID:947754;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;gene_synonym=ECK3801,JW3779;locus_tag=b3807 NC_000913.3 RefSeq CDS 3993739 3994059 . - 0 ID=cds3743;Parent=gene3889;Dbxref=ASAP:ABE-0012435,UniProtKB/Swiss-Prot:P27838,Genbank:NP_418251.1,EcoGene:EG11653,GeneID:947754;Name=NP_418251.1;Note=iron-binding frataxin homolog~cyaY is expressed~neither knock-out nor overexpression of cyaY in Escherichia coli affects cellular iron content or sensitivity to oxidants~possibly involved in maintaining the intracellular iron pool in a soluble%2C non-toxic and bio-available form for biosynthetic pathways%2C while preventing the participation of iron in oxidative damage;gbkey=CDS;gene=cyaY;product=iron-dependent inhibitor of iron-sulfur cluster formation%3B frataxin%3B iron-binding and oxidizing protein;protein_id=NP_418251.1;transl_table=11 NC_000913.3 RefSeq gene 3994522 3994725 . + . ID=gene3890;Dbxref=EcoGene:EG12353,GeneID:1450304;Name=yifL;gbkey=Gene;gene=yifL;gene_biotype=protein_coding;gene_synonym=ECK3803,JW3781;locus_tag=b4558 NC_000913.3 RefSeq CDS 3994522 3994725 . + 0 ID=cds3744;Parent=gene3890;Dbxref=ASAP:ABE-0285079,UniProtKB/Swiss-Prot:P0ADN6,Genbank:YP_588473.1,EcoGene:EG12353,GeneID:1450304;Name=YP_588473.1;gbkey=CDS;gene=yifL;product=putative lipoprotein;protein_id=YP_588473.1;transl_table=11 NC_000913.3 RefSeq gene 3994762 3995586 . + . ID=gene3891;Dbxref=EcoGene:EG10209,GeneID:948364;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;gene_synonym=ECK3804,JW5592;locus_tag=b3809 NC_000913.3 RefSeq CDS 3994762 3995586 . + 0 ID=cds3745;Parent=gene3891;Dbxref=ASAP:ABE-0012442,UniProtKB/Swiss-Prot:P0A6K1,Genbank:NP_418254.2,EcoGene:EG10209,GeneID:948364;Name=NP_418254.2;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=NP_418254.2;transl_table=11 NC_000913.3 RefSeq gene 3995583 3996290 . + . ID=gene3892;Dbxref=EcoGene:EG11201,GeneID:948359;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;gene_synonym=ECK3805,JW3783;locus_tag=b3810 NC_000913.3 RefSeq CDS 3995583 3996290 . + 0 ID=cds3746;Parent=gene3892;Dbxref=ASAP:ABE-0012444,UniProtKB/Swiss-Prot:P23305,Genbank:NP_418255.1,EcoGene:EG11201,GeneID:948359;Name=NP_418255.1;gbkey=CDS;gene=yigA;product=DUF484 family protein;protein_id=NP_418255.1;transl_table=11 NC_000913.3 RefSeq gene 3996287 3997183 . + . ID=gene3893;Dbxref=EcoGene:EG11069,GeneID:948355;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;gene_synonym=ECK3806,JW3784;locus_tag=b3811 NC_000913.3 RefSeq CDS 3996287 3997183 . + 0 ID=cds3747;Parent=gene3893;Dbxref=ASAP:ABE-0012448,UniProtKB/Swiss-Prot:P0A8P6,Genbank:NP_418256.1,EcoGene:EG11069,GeneID:948355;Name=NP_418256.1;Note=site-specific recombinase%2C acts on cer sequence of ColE1%2C effects chromosome segregation at cell division;gbkey=CDS;gene=xerC;product=site-specific tyrosine recombinase;protein_id=NP_418256.1;transl_table=11 NC_000913.3 RefSeq gene 3997183 3997899 . + . ID=gene3894;Dbxref=EcoGene:EG11202,GeneID:948357;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;gene_synonym=ECK3807,JW3785;locus_tag=b3812 NC_000913.3 RefSeq CDS 3997183 3997899 . + 0 ID=cds3748;Parent=gene3894;Dbxref=ASAP:ABE-0012450,UniProtKB/Swiss-Prot:P0ADP0,Genbank:NP_418257.1,EcoGene:EG11202,GeneID:948357;Name=NP_418257.1;Note=putative phosphatase;gbkey=CDS;gene=yigB;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase%3B pyrimidine phosphatase%3B riboflavin synthesis;protein_id=NP_418257.1;transl_table=11 NC_000913.3 RefSeq gene 3997983 4000145 . + . ID=gene3895;Dbxref=EcoGene:EG11064,GeneID:948347;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=dar-2,dda,ECK3808,JW3786,mutU,pdeB,rad,recL,srjC,uvr502,uvrE;locus_tag=b3813 NC_000913.3 RefSeq CDS 3997983 4000145 . + 0 ID=cds3749;Parent=gene3895;Dbxref=ASAP:ABE-0012455,UniProtKB/Swiss-Prot:P03018,Genbank:NP_418258.1,EcoGene:EG11064,GeneID:948347;Name=NP_418258.1;gbkey=CDS;gene=uvrD;product=DNA-dependent ATPase I and helicase II;protein_id=NP_418258.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4000150 4000252 . + . ID=id487;Note=RIP288 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4000292 4001056 . - . ID=gene3896;Dbxref=EcoGene:EG11462,GeneID:2847679;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;gene_synonym=ECK3809,JW5591;locus_tag=b4482 NC_000913.3 RefSeq CDS 4000292 4001056 . - 0 ID=cds3750;Parent=gene3896;Dbxref=ASAP:ABE-0174110,UniProtKB/Swiss-Prot:P27840,Genbank:YP_026261.1,EcoGene:EG11462,GeneID:2847679;Name=YP_026261.1;gbkey=CDS;gene=yigE;product=DUF2233 family protein;protein_id=YP_026261.1;transl_table=11 NC_000913.3 RefSeq gene 4001426 4002376 . + . ID=gene3897;Dbxref=EcoGene:EG11463,GeneID:948351;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;gene_synonym=ECK3810,JW3789;locus_tag=b3816 NC_000913.3 RefSeq CDS 4001426 4002376 . + 0 ID=cds3751;Parent=gene3897;Dbxref=ASAP:ABE-0012464,UniProtKB/Swiss-Prot:P0ABI4,Genbank:NP_418260.1,EcoGene:EG11463,GeneID:948351;Name=NP_418260.1;Note=Mg2+ transport%2C system I;gbkey=CDS;gene=corA;product=magnesium/nickel/cobalt transporter;protein_id=NP_418260.1;transl_table=11 NC_000913.3 RefSeq gene 4002419 4002799 . - . ID=gene3898;Dbxref=EcoGene:EG11464,GeneID:948340;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;gene_synonym=ECK3811,JW3790;locus_tag=b3817 NC_000913.3 RefSeq CDS 4002419 4002799 . - 0 ID=cds3752;Parent=gene3898;Dbxref=ASAP:ABE-0012466,UniProtKB/Swiss-Prot:P27842,Genbank:NP_418261.1,EcoGene:EG11464,GeneID:948340;Name=NP_418261.1;gbkey=CDS;gene=yigF;product=DUF2628 family putative inner membrane protein;protein_id=NP_418261.1;transl_table=11 NC_000913.3 RefSeq gene 4002813 4003193 . - . ID=gene3899;Dbxref=EcoGene:EG11465,GeneID:948344;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;gene_synonym=ECK3812,JW5590;locus_tag=b3818 NC_000913.3 RefSeq CDS 4002813 4003193 . - 0 ID=cds3753;Parent=gene3899;Dbxref=ASAP:ABE-0012468,UniProtKB/Swiss-Prot:P27843,Genbank:NP_418262.2,EcoGene:EG11465,GeneID:948344;Name=NP_418262.2;gbkey=CDS;gene=yigG;product=PRK11371 family inner membrane protein;protein_id=NP_418262.2;transl_table=11 NC_000913.3 RefSeq gene 4003288 4004178 . - . ID=gene3900;Dbxref=EcoGene:EG11466,GeneID:948330;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;gene_synonym=ECK3813,JW5589,yigH;locus_tag=b3819 NC_000913.3 RefSeq CDS 4003288 4004178 . - 0 ID=cds3754;Parent=gene3900;Dbxref=ASAP:ABE-0012472,UniProtKB/Swiss-Prot:P27844,Genbank:YP_026262.1,EcoGene:EG11466,GeneID:948330;Name=YP_026262.1;gbkey=CDS;gene=rarD;product=putative chloramphenical resistance permease;protein_id=YP_026262.1;transl_table=11 NC_000913.3 RefSeq gene 4004230 4004697 . - . ID=gene3901;Dbxref=EcoGene:EG11467,GeneID:948338;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;gene_synonym=ECK3814,JW5588;locus_tag=b3820 NC_000913.3 RefSeq CDS 4004230 4004697 . - 0 ID=cds3755;Parent=gene3901;Dbxref=ASAP:ABE-0012474,UniProtKB/Swiss-Prot:P0ADP2,Genbank:NP_418264.4,EcoGene:EG11467,GeneID:948338;Name=NP_418264.4;gbkey=CDS;gene=yigI;product=4HBT thioesterase family protein;protein_id=NP_418264.4;transl_table=11 NC_000913.3 RefSeq gene 4004862 4005731 . + . ID=gene3902;Dbxref=EcoGene:EG10738,GeneID:948307;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;gene_synonym=ECK3815,JW3794;locus_tag=b3821 NC_000913.3 RefSeq CDS 4004862 4005731 . + 0 ID=cds3756;Parent=gene3902;Dbxref=ASAP:ABE-0012479,UniProtKB/Swiss-Prot:P0A921,Genbank:NP_418265.1,EcoGene:EG10738,GeneID:948307;Name=NP_418265.1;gbkey=CDS;gene=pldA;product=outer membrane phospholipase A;protein_id=NP_418265.1;transl_table=11 NC_000913.3 RefSeq gene 4005864 4007693 . + . ID=gene3903;Dbxref=EcoGene:EG10833,GeneID:948318;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;gene_synonym=ECK3816,JW5855;locus_tag=b3822 NC_000913.3 RefSeq CDS 4005864 4007693 . + 0 ID=cds3757;Parent=gene3903;Dbxref=ASAP:ABE-0012483,UniProtKB/Swiss-Prot:P15043,Genbank:YP_026263.3,EcoGene:EG10833,GeneID:948318;Name=YP_026263.3;gbkey=CDS;gene=recQ;product=ATP-dependent DNA helicase;protein_id=YP_026263.3;transl_table=11 NC_000913.3 RefSeq gene 4007757 4008377 . + . ID=gene3904;Dbxref=EcoGene:EG11468,GeneID:948317;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;gene_synonym=ECK3817,JW5586,yigJ;locus_tag=b3823 NC_000913.3 RefSeq CDS 4007757 4008377 . + 0 ID=cds3758;Parent=gene3904;Dbxref=ASAP:ABE-0012487,UniProtKB/Swiss-Prot:P0AG38,Genbank:YP_026264.1,EcoGene:EG11468,GeneID:948317;Name=YP_026264.1;Note=amino acid exporter (threonine)~threonine efflux protein (RhtB family);gbkey=CDS;gene=rhtC;product=threonine efflux pump;protein_id=YP_026264.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4008397 4008430 . + . ID=id488;Note=REP289 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4008439 4009059 . - . ID=gene3905;Dbxref=EcoGene:EG11469,GeneID:948316;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;gene_synonym=ECK3818,JW5585,yigK;locus_tag=b3824 NC_000913.3 RefSeq CDS 4008439 4009059 . - 0 ID=cds3759;Parent=gene3905;Dbxref=ASAP:ABE-0012490,UniProtKB/Swiss-Prot:P0AG34,Genbank:YP_026265.1,EcoGene:EG11469,GeneID:948316;Name=YP_026265.1;gbkey=CDS;gene=rhtB;product=homoserine%2C homoserine lactone and S-methyl-methionine efflux pump;protein_id=YP_026265.1;transl_table=11 NC_000913.3 RefSeq gene 4009170 4010192 . + . ID=gene3906;Dbxref=EcoGene:EG10739,GeneID:948314;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;gene_synonym=ECK3819,JW5584;locus_tag=b3825 NC_000913.3 RefSeq CDS 4009170 4010192 . + 0 ID=cds3760;Parent=gene3906;Dbxref=ASAP:ABE-0012494,UniProtKB/Swiss-Prot:P07000,Genbank:YP_026266.1,EcoGene:EG10739,GeneID:948314;Name=YP_026266.1;gbkey=CDS;gene=pldB;product=lysophospholipase L2;protein_id=YP_026266.1;transl_table=11 NC_000913.3 RefSeq gene 4010200 4011000 . + . ID=gene3907;Dbxref=EcoGene:EG11470,GeneID:2847768;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;gene_synonym=ECK3820,JW5854;locus_tag=b3826 NC_000913.3 RefSeq CDS 4010200 4011000 . + 0 ID=cds3761;Parent=gene3907;Dbxref=ASAP:ABE-0012500,UniProtKB/Swiss-Prot:P27848,Genbank:YP_026267.1,EcoGene:EG11470,GeneID:2847768;Name=YP_026267.1;Note=conserved protein%2C phosphatase-like domain;gbkey=CDS;gene=yigL;product=pyridoxal phosphate phosphatase;protein_id=YP_026267.1;transl_table=11 NC_000913.3 RefSeq gene 4011076 4011975 . + . ID=gene3908;Dbxref=EcoGene:EG11471,GeneID:948309;Name=yigM;gbkey=Gene;gene=yigM;gene_biotype=protein_coding;gene_synonym=ECK3821,JW3803;locus_tag=b3827 NC_000913.3 RefSeq CDS 4011076 4011975 . + 0 ID=cds3762;Parent=gene3908;Dbxref=ASAP:ABE-0012504,UniProtKB/Swiss-Prot:P0ADP5,Genbank:NP_418271.1,EcoGene:EG11471,GeneID:948309;Name=NP_418271.1;gbkey=CDS;gene=yigM;product=putative inner membrane EamA-like transporter;protein_id=NP_418271.1;transl_table=11 NC_000913.3 RefSeq gene 4011863 4012816 . - . ID=gene3909;Dbxref=EcoGene:EG10591,GeneID:948310;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;gene_synonym=ECK3822,JW3804;locus_tag=b3828 NC_000913.3 RefSeq CDS 4011863 4012816 . - 0 ID=cds3763;Parent=gene3909;Dbxref=ASAP:ABE-0012506,UniProtKB/Swiss-Prot:P0A9F9,Genbank:NP_418272.1,EcoGene:EG10591,GeneID:948310;Name=NP_418272.1;Note=regulator for metE and metH;gbkey=CDS;gene=metR;product=methionine biosynthesis regulon transcriptional regulator;protein_id=NP_418272.1;transl_table=11 NC_000913.3 RefSeq gene 4013053 4015314 . + . ID=gene3910;Dbxref=EcoGene:EG10584,GeneID:948323;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;gene_synonym=ECK3823,JW3805,metB12;locus_tag=b3829 NC_000913.3 RefSeq CDS 4013053 4015314 . + 0 ID=cds3764;Parent=gene3910;Dbxref=ASAP:ABE-0012520,UniProtKB/Swiss-Prot:P25665,Genbank:NP_418273.1,EcoGene:EG10584,GeneID:948323;Name=NP_418273.1;Note=tetrahydropteroyltriglutamate methyltransferase;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase;protein_id=NP_418273.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4015322 4015344 . + . ID=id489;Note=REP290 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4015354 4016169 . - . ID=gene3911;Dbxref=EcoGene:EG14321,GeneID:948320;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;gene_synonym=ECK3824,JW5853;locus_tag=b3830 NC_000913.3 RefSeq CDS 4015354 4016169 . - 0 ID=cds3765;Parent=gene3911;Dbxref=ASAP:ABE-0012522,UniProtKB/Swiss-Prot:P56262,Genbank:YP_026268.1,EcoGene:EG14321,GeneID:948320;Name=YP_026268.1;Note=putative enzyme;gbkey=CDS;gene=ysgA;product=putative carboxymethylenebutenolidase;protein_id=YP_026268.1;transl_table=11 NC_000913.3 RefSeq gene 4016431 4017192 . + . ID=gene3912;Dbxref=EcoGene:EG11045,GeneID:948987;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;gene_synonym=ECK3825,JW3808;locus_tag=b3831 NC_000913.3 RefSeq CDS 4016431 4017192 . + 0 ID=cds3766;Parent=gene3912;Dbxref=ASAP:ABE-0012528,UniProtKB/Swiss-Prot:P12758,Genbank:NP_418275.1,EcoGene:EG11045,GeneID:948987;Name=NP_418275.1;gbkey=CDS;gene=udp;product=uridine phosphorylase;protein_id=NP_418275.1;transl_table=11 NC_000913.3 RefSeq gene 4017333 4018760 . + . ID=gene3913;Dbxref=EcoGene:EG11472,GeneID:948966;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;gene_synonym=dinK,ECK3826,JW3809,sosB,yigN;locus_tag=b3832 NC_000913.3 RefSeq CDS 4017333 4018760 . + 0 ID=cds3767;Parent=gene3913;Dbxref=ASAP:ABE-0012531,UniProtKB/Swiss-Prot:P0AG71,Genbank:NP_418276.1,EcoGene:EG11472,GeneID:948966;Name=NP_418276.1;Note=putative alpha helix chain;gbkey=CDS;gene=rmuC;product=DNA recombination protein;protein_id=NP_418276.1;transl_table=11 NC_000913.3 RefSeq gene 4018855 4019610 . + . ID=gene3914;Dbxref=EcoGene:EG11473,GeneID:948926;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;gene_synonym=ECK3827,JW5581,menG,menH,yigO;locus_tag=b3833 NC_000913.3 RefSeq CDS 4018855 4019610 . + 0 ID=cds3768;Parent=gene3914;Dbxref=ASAP:ABE-0012534,UniProtKB/Swiss-Prot:P0A887,Genbank:YP_026269.1,EcoGene:EG11473,GeneID:948926;Name=YP_026269.1;Note=2-octaprenyl-6-methoxy-1%2C4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;gene=ubiE;product=bifunctional 2-octaprenyl-6-methoxy-1%2C4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase;protein_id=YP_026269.1;transl_table=11 NC_000913.3 RefSeq gene 4019624 4020229 . + . ID=gene3915;Dbxref=EcoGene:EG11474,GeneID:948915;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;gene_synonym=ECK3828,JW3811,yigP;locus_tag=b3834 NC_000913.3 RefSeq CDS 4019624 4020229 . + 0 ID=cds3769;Parent=gene3915;Dbxref=ASAP:ABE-0012536,UniProtKB/Swiss-Prot:P0ADP7,Genbank:NP_418278.1,EcoGene:EG11474,GeneID:948915;Name=NP_418278.1;gbkey=CDS;gene=ubiJ;product=aerobic ubiquinone synthesis protein%2C SCP2 family protein;protein_id=NP_418278.1;transl_table=11 NC_000913.3 RefSeq gene 4019978 4020229 . + . ID=gene3916;Dbxref=EcoGene:EG31191,GeneID:14678511;Name=esrE;gbkey=Gene;gene=esrE;gene_biotype=ncRNA;gene_synonym=ECK4519;locus_tag=b4707 NC_000913.3 RefSeq ncRNA 4019978 4020229 . + . ID=rna145;Parent=gene3916;Dbxref=EcoGene:EG31191,GeneID:14678511;gbkey=ncRNA;gene=esrE;ncrna_class=other;product=putative sRNA of unknown function NC_000913.3 RefSeq exon 4019978 4020229 . + . ID=id490;Parent=rna145;Dbxref=EcoGene:EG31191,GeneID:14678511;gbkey=ncRNA;gene=esrE;ncrna_class=other;product=putative sRNA of unknown function NC_000913.3 RefSeq gene 4020226 4021866 . + . ID=gene3917;Dbxref=EcoGene:EG11476,GeneID:948322;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,ECK3829,JW3812,yigQ,yigR,yigS;locus_tag=b3835 NC_000913.3 RefSeq CDS 4020226 4021866 . + 0 ID=cds3770;Parent=gene3917;Dbxref=ASAP:ABE-0012539,UniProtKB/Swiss-Prot:P0A6A0,Genbank:NP_418279.1,EcoGene:EG11476,GeneID:948322;Name=NP_418279.1;gbkey=CDS;gene=ubiB;product=regulator of octaprenylphenol hydroxylation%2C ubiquinone synthesis%3B regulator of 2'-N-acetyltransferase%3B putative ABC1 family protein kinase;protein_id=NP_418279.1;transl_table=11 NC_000913.3 RefSeq gene 4021945 4022214 . + . ID=gene3918;Dbxref=EcoGene:EG11478,GeneID:948321;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;gene_synonym=ECK3830,JW3813,mttA1,yigT;locus_tag=b3836 NC_000913.3 RefSeq CDS 4021945 4022214 . + 0 ID=cds3771;Parent=gene3918;Dbxref=ASAP:ABE-0012541,UniProtKB/Swiss-Prot:P69428,Genbank:NP_418280.4,EcoGene:EG11478,GeneID:948321;Name=NP_418280.4;gbkey=CDS;gene=tatA;product=TatABCE protein translocation system subunit;protein_id=NP_418280.4;transl_table=11 NC_000913.3 RefSeq gene 4022218 4022733 . + . ID=gene3919;Dbxref=EcoGene:EG14322,GeneID:948319;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;gene_synonym=ECK3831,JW5580,mttA2,ysgB;locus_tag=b3838 NC_000913.3 RefSeq CDS 4022218 4022733 . + 0 ID=cds3772;Parent=gene3919;Dbxref=ASAP:ABE-0012545,UniProtKB/Swiss-Prot:P69425,Genbank:YP_026270.1,EcoGene:EG14322,GeneID:948319;Name=YP_026270.1;gbkey=CDS;gene=tatB;product=TatABCE protein translocation system subunit;protein_id=YP_026270.1;transl_table=11 NC_000913.3 RefSeq gene 4022736 4023512 . + . ID=gene3920;Dbxref=EcoGene:EG11479,GeneID:948328;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;gene_synonym=ECK3832,JW3815,mttB,yigU,yigV;locus_tag=b3839 NC_000913.3 RefSeq CDS 4022736 4023512 . + 0 ID=cds3773;Parent=gene3920;Dbxref=ASAP:ABE-0012547,UniProtKB/Swiss-Prot:P69423,Genbank:NP_418282.1,EcoGene:EG11479,GeneID:948328;Name=NP_418282.1;gbkey=CDS;gene=tatC;product=TatABCE protein translocation system subunit;protein_id=NP_418282.1;transl_table=11 NC_000913.3 RefSeq gene 4023554 4024336 . + . ID=gene3921;Dbxref=EcoGene:EG11481,GeneID:2847752;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;gene_synonym=ECK3833,JW5931,mttC,yigW,yigX;locus_tag=b4483 NC_000913.3 RefSeq CDS 4023554 4024336 . + 0 ID=cds3774;Parent=gene3921;Dbxref=ASAP:ABE-0174116,UniProtKB/Swiss-Prot:P27859,Genbank:YP_026271.1,EcoGene:EG11481,GeneID:2847752;Name=YP_026271.1;Note=cytoplasmic Dnase;gbkey=CDS;gene=tatD;product=quality control of Tat-exported FeS proteins%3B Mg-dependent cytoplasmic DNase;protein_id=YP_026271.1;transl_table=11 NC_000913.3 RefSeq gene 4024333 4024821 . - . ID=gene3922;Dbxref=EcoGene:EG10839,GeneID:948327;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;gene_synonym=ECK3834,hlyT,JW3818,sfrB;locus_tag=b3842 NC_000913.3 RefSeq CDS 4024333 4024821 . - 0 ID=cds3775;Parent=gene3922;Dbxref=ASAP:ABE-0012553,UniProtKB/Swiss-Prot:P0AFW0,Genbank:NP_418284.1,EcoGene:EG10839,GeneID:948327;Name=NP_418284.1;Note=transcriptional activator affecting biosynthesis of lipopolysaccharide core%2C F pilin%2C and haemolysin;gbkey=CDS;gene=rfaH;product=transcription antitermination protein;protein_id=NP_418284.1;transl_table=11 NC_000913.3 RefSeq gene 4024988 4026481 . + . ID=gene3923;Dbxref=EcoGene:EG11396,GeneID:948326;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;gene_synonym=ECK3835,JW3819,yigC,yigY;locus_tag=b3843 NC_000913.3 RefSeq CDS 4024988 4026481 . + 0 ID=cds3776;Parent=gene3923;Dbxref=ASAP:ABE-0012557,UniProtKB/Swiss-Prot:P0AAB4,Genbank:NP_418285.1,EcoGene:EG11396,GeneID:948326;Name=NP_418285.1;gbkey=CDS;gene=ubiD;product=3-octaprenyl-4-hydroxybenzoate decarboxylase;protein_id=NP_418285.1;transl_table=11 NC_000913.3 RefSeq gene 4026527 4027228 . + . ID=gene3924;Dbxref=EcoGene:EG10334,GeneID:948325;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=ECK3836,fadI,flrD,fsrC,hsm-6,JW3820;locus_tag=b3844 NC_000913.3 RefSeq CDS 4026527 4027228 . + 0 ID=cds3777;Parent=gene3924;Dbxref=ASAP:ABE-0012559,UniProtKB/Swiss-Prot:P0AEN1,Genbank:NP_418286.1,EcoGene:EG10334,GeneID:948325;Name=NP_418286.1;Note=ferrisiderophore reductase%3B flavin reductase (NADPH:flavin oxidoreductase);gbkey=CDS;gene=fre;product=NAD(P)H-flavin reductase;protein_id=NP_418286.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4027322 4027602 . + . ID=id491;Note=REP291 (repetitive extragenic palindromic) element%3B contains 6 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4027609 4028772 . - . ID=gene3925;Dbxref=EcoGene:EG10278,GeneID:948324;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;gene_synonym=ECK3837,JW5578,oldA;locus_tag=b3845 NC_000913.3 RefSeq CDS 4027609 4028772 . - 0 ID=cds3778;Parent=gene3925;Dbxref=ASAP:ABE-0012562,UniProtKB/Swiss-Prot:P21151,Genbank:YP_026272.1,EcoGene:EG10278,GeneID:948324;Name=YP_026272.1;Note=thiolase I%3B 3-ketoacyl-CoA thiolase%3B acetyl-CoA transferase;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase (thiolase I);protein_id=YP_026272.1;transl_table=11 NC_000913.3 RefSeq gene 4028782 4030971 . - . ID=gene3926;Dbxref=EcoGene:EG10279,GeneID:948336;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;gene_synonym=ECK3838,JW3822,oldB;locus_tag=b3846 NC_000913.3 RefSeq CDS 4028782 4030971 . - 0 ID=cds3779;Parent=gene3926;Dbxref=ASAP:ABE-0012564,UniProtKB/Swiss-Prot:P21177,Genbank:NP_418288.1,EcoGene:EG10279,GeneID:948336;Name=NP_418288.1;Note=4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase%3B 3-hydroxybutyryl-CoA epimerase%3B delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%3B enoyl-CoA hydratase;gbkey=CDS;gene=fadB;product=fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase;protein_id=NP_418288.1;transl_table=11 NC_000913.3 RefSeq gene 4031161 4032492 . + . ID=gene3927;Dbxref=EcoGene:EG10698,GeneID:948335;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;gene_synonym=ECK3839,JW3823;locus_tag=b3847 NC_000913.3 RefSeq CDS 4031161 4032492 . + 0 ID=cds3780;Parent=gene3927;Dbxref=ASAP:ABE-0012569,UniProtKB/Swiss-Prot:P21165,Genbank:NP_418289.1,EcoGene:EG10698,GeneID:948335;Name=NP_418289.1;gbkey=CDS;gene=pepQ;product=proline dipeptidase;protein_id=NP_418289.1;transl_table=11 NC_000913.3 RefSeq gene 4032492 4033106 . + . ID=gene3928;Dbxref=EcoGene:EG11484,GeneID:948334;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;gene_synonym=ECK3840,JW5577;locus_tag=b3848 NC_000913.3 RefSeq CDS 4032492 4033106 . + 0 ID=cds3781;Parent=gene3928;Dbxref=ASAP:ABE-0012571,UniProtKB/Swiss-Prot:P27862,Genbank:NP_418290.4,EcoGene:EG11484,GeneID:948334;Name=NP_418290.4;gbkey=CDS;gene=yigZ;product=UPF0029 family protein;protein_id=NP_418290.4;transl_table=11 NC_000913.3 RefSeq gene 4033145 4034596 . + . ID=gene3929;Dbxref=EcoGene:EG11021,GeneID:948333;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;gene_synonym=ECK3841,JW5576,sapJ;locus_tag=b3849 NC_000913.3 RefSeq CDS 4033145 4034596 . + 0 ID=cds3782;Parent=gene3929;Dbxref=ASAP:ABE-0012574,UniProtKB/Swiss-Prot:P0AFZ7,Genbank:YP_026273.1,EcoGene:EG11021,GeneID:948333;Name=YP_026273.1;Note=potassium uptake%2C requires TrkE;gbkey=CDS;gene=trkH;product=potassium transporter;protein_id=YP_026273.1;transl_table=11 NC_000913.3 RefSeq gene 4034608 4035153 . + . ID=gene3930;Dbxref=EcoGene:EG11485,GeneID:948331;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;gene_synonym=ECK3842,JW3827,yihB;locus_tag=b3850 NC_000913.3 RefSeq CDS 4034608 4035153 . + 0 ID=cds3783;Parent=gene3930;Dbxref=ASAP:ABE-0012577,UniProtKB/Swiss-Prot:P0ACB4,Genbank:NP_418292.1,EcoGene:EG11485,GeneID:948331;Name=NP_418292.1;Note=protoporphyrin oxidase;gbkey=CDS;gene=hemG;product=protoporphyrin oxidase%2C flavoprotein;protein_id=NP_418292.1;transl_table=11 NC_000913.3 RefSeq gene 4035531 4037072 . + . ID=gene3931;Dbxref=EcoGene:EG30084,GeneID:948332;Name=rrsA;gbkey=Gene;gene=rrsA;gene_biotype=rRNA;gene_synonym=ECK3843,JWR0092;locus_tag=b3851 NC_000913.3 RefSeq rRNA 4035531 4037072 . + . ID=rna146;Parent=gene3931;Dbxref=ASAP:ABE-0012579,EcoGene:EG30084,GeneID:948332;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA of rrnA operon NC_000913.3 RefSeq exon 4035531 4037072 . + . ID=id492;Parent=rna146;Dbxref=ASAP:ABE-0012579,EcoGene:EG30084,GeneID:948332;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA of rrnA operon NC_000913.3 RefSeq gene 4037141 4037217 . + . ID=gene3932;Dbxref=EcoGene:EG30043,GeneID:948339;Name=ileT;gbkey=Gene;gene=ileT;gene_biotype=tRNA;gene_synonym=ECK3844,JWR0093,tilA;locus_tag=b3852 NC_000913.3 RefSeq tRNA 4037141 4037217 . + . ID=rna147;Parent=gene3932;Dbxref=ASAP:ABE-0012581,EcoGene:EG30043,GeneID:948339;Note=anticodon: GAU;gbkey=tRNA;gene=ileT;product=tRNA-Ile NC_000913.3 RefSeq exon 4037141 4037217 . + . ID=id493;Parent=rna147;Dbxref=ASAP:ABE-0012581,EcoGene:EG30043,GeneID:948339;Note=anticodon: GAU;gbkey=tRNA;gene=ileT;product=tRNA-Ile NC_000913.3 RefSeq gene 4037260 4037335 . + . ID=gene3933;Dbxref=EcoGene:EG30008,GeneID:948337;Name=alaT;gbkey=Gene;gene=alaT;gene_biotype=tRNA;gene_synonym=ECK3845,JWR0094,talA;locus_tag=b3853 NC_000913.3 RefSeq tRNA 4037260 4037335 . + . ID=rna148;Parent=gene3933;Dbxref=ASAP:ABE-0012584,EcoGene:EG30008,GeneID:948337;Note=anticodon: UGC;gbkey=tRNA;gene=alaT;product=tRNA-Ala NC_000913.3 RefSeq exon 4037260 4037335 . + . ID=id494;Parent=rna148;Dbxref=ASAP:ABE-0012584,EcoGene:EG30008,GeneID:948337;Note=anticodon: UGC;gbkey=tRNA;gene=alaT;product=tRNA-Ala NC_000913.3 RefSeq gene 4037519 4040423 . + . ID=gene3934;Dbxref=EcoGene:EG30077,GeneID:948341;Name=rrlA;gbkey=Gene;gene=rrlA;gene_biotype=rRNA;gene_synonym=ECK3846,JWR0095;locus_tag=b3854 NC_000913.3 RefSeq rRNA 4037519 4040423 . + . ID=rna149;Parent=gene3934;Dbxref=ASAP:ABE-0012586,EcoGene:EG30077,GeneID:948341;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA of rrnA operon NC_000913.3 RefSeq exon 4037519 4040423 . + . ID=id495;Parent=rna149;Dbxref=ASAP:ABE-0012586,EcoGene:EG30077,GeneID:948341;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA of rrnA operon NC_000913.3 RefSeq gene 4040517 4040636 . + . ID=gene3935;Dbxref=EcoGene:EG30070,GeneID:948345;Name=rrfA;gbkey=Gene;gene=rrfA;gene_biotype=rRNA;gene_synonym=ECK3847,JWR0096;locus_tag=b3855 NC_000913.3 RefSeq rRNA 4040517 4040636 . + . ID=rna150;Parent=gene3935;Dbxref=ASAP:ABE-0012588,EcoGene:EG30070,GeneID:948345;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA of rrnA operon NC_000913.3 RefSeq exon 4040517 4040636 . + . ID=id496;Parent=rna150;Dbxref=ASAP:ABE-0012588,EcoGene:EG30070,GeneID:948345;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA of rrnA operon NC_000913.3 RefSeq repeat_region 4040864 4040899 . + . ID=id497;Note=REP292 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4040906 4041433 . - . ID=gene3936;Dbxref=EcoGene:EG11828,GeneID:948343;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;gene_synonym=ECK3848,JW5575,yihC;locus_tag=b3856 NC_000913.3 RefSeq CDS 4040906 4041433 . - 0 ID=cds3784;Parent=gene3936;Dbxref=ASAP:ABE-0012591,UniProtKB/Swiss-Prot:P32125,Genbank:NP_418293.2,EcoGene:EG11828,GeneID:948343;Name=NP_418293.2;gbkey=CDS;gene=mobB;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=NP_418293.2;transl_table=11 NC_000913.3 RefSeq gene 4041415 4041999 . - . ID=gene3937;Dbxref=EcoGene:EG11829,GeneID:948349;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;gene_synonym=chlB,ECK3849,JW3829,mob,narB;locus_tag=b3857 NC_000913.3 RefSeq CDS 4041415 4041999 . - 0 ID=cds3785;Parent=gene3937;Dbxref=ASAP:ABE-0012593,UniProtKB/Swiss-Prot:P32173,Genbank:NP_418294.1,EcoGene:EG11829,GeneID:948349;Name=NP_418294.1;Note=molybdopterin ---> molybdopterin-guanine dinucleotide%2C protein Ar;gbkey=CDS;gene=mobA;product=molybdopterin-guanine dinucleotide synthase;protein_id=NP_418294.1;transl_table=11 NC_000913.3 RefSeq gene 4042069 4042338 . + . ID=gene3938;Dbxref=EcoGene:EG11830,GeneID:948348;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;gene_synonym=ECK3850,JW3830;locus_tag=b3858 NC_000913.3 RefSeq CDS 4042069 4042338 . + 0 ID=cds3786;Parent=gene3938;Dbxref=ASAP:ABE-0012599,UniProtKB/Swiss-Prot:P0ADP9,Genbank:NP_418295.1,EcoGene:EG11830,GeneID:948348;Name=NP_418295.1;gbkey=CDS;gene=yihD;product=DUF1040 protein YihD;protein_id=NP_418295.1;transl_table=11 NC_000913.3 RefSeq gene 4042415 4043401 . + . ID=gene3939;Dbxref=EcoGene:EG11831,GeneID:948346;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;gene_synonym=ECK3851,JW3831,orfA,rdoA,yihE;locus_tag=b3859 NC_000913.3 RefSeq CDS 4042415 4043401 . + 0 ID=cds3787;Parent=gene3939;Dbxref=ASAP:ABE-0012604,UniProtKB/Swiss-Prot:P0C0K3,Genbank:NP_418296.1,EcoGene:EG11831,GeneID:948346;Name=NP_418296.1;gbkey=CDS;gene=srkA;product=Cpx stress response Thr/Ser protein kinase%3B MazF antagonist protein;protein_id=NP_418296.1;transl_table=11 NC_000913.3 RefSeq gene 4043418 4044044 . + . ID=gene3940;Dbxref=EcoGene:EG11297,GeneID:948353;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;gene_synonym=dsf,ECK3852,iarA,JW3832,ppfA;locus_tag=b3860 NC_000913.3 RefSeq CDS 4043418 4044044 . + 0 ID=cds3788;Parent=gene3940;Dbxref=ASAP:ABE-0012606,UniProtKB/Swiss-Prot:P0AEG4,Genbank:NP_418297.1,EcoGene:EG11297,GeneID:948353;Name=NP_418297.1;Note=protein disulfide isomerase I%2C essential for cytochrome c synthesis and formate-dependent reduction;gbkey=CDS;gene=dsbA;product=periplasmic protein disulfide isomerase I;protein_id=NP_418297.1;transl_table=11 NC_000913.3 RefSeq gene 4044199 4045629 . + . ID=gene3941;Dbxref=EcoGene:EG11832,GeneID:948352;Name=yihF;gbkey=Gene;gene=yihF;gene_biotype=protein_coding;gene_synonym=ECK3853,JW5574;locus_tag=b3861 NC_000913.3 RefSeq CDS 4044199 4045629 . + 0 ID=cds3789;Parent=gene3941;Dbxref=ASAP:ABE-0012609,UniProtKB/Swiss-Prot:P32128,Genbank:NP_418298.4,EcoGene:EG11832,GeneID:948352;Name=NP_418298.4;Note=putative GTP-binding protein;gbkey=CDS;gene=yihF;product=DUF945 family protein;protein_id=NP_418298.4;transl_table=11 NC_000913.3 RefSeq gene 4045670 4046602 . - . ID=gene3942;Dbxref=EcoGene:EG11833,GeneID:948350;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;gene_synonym=ECK3854,JW3834;locus_tag=b3862 NC_000913.3 RefSeq CDS 4045670 4046602 . - 0 ID=cds3790;Parent=gene3942;Dbxref=ASAP:ABE-0012611,UniProtKB/Swiss-Prot:P32129,Genbank:NP_418299.1,EcoGene:EG11833,GeneID:948350;Name=NP_418299.1;Note=putative endonuclease;gbkey=CDS;gene=yihG;product=inner membrane protein%2C inner membrane acyltransferase;protein_id=NP_418299.1;transl_table=11 NC_000913.3 RefSeq gene 4046966 4049752 . + . ID=gene3943;Dbxref=EcoGene:EG10746,GeneID:948356;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;gene_synonym=ECK3855,JW3835,resA;locus_tag=b3863 NC_000913.3 RefSeq CDS 4046966 4049752 . + 0 ID=cds3791;Parent=gene3943;Dbxref=ASAP:ABE-0012618,UniProtKB/Swiss-Prot:P00582,Genbank:NP_418300.1,EcoGene:EG10746,GeneID:948356;Name=NP_418300.1;Note=DNA polymerase I%2C 3' --> 5' polymerase%2C 5' --> 3' and 3' --> 5' exonuclease;gbkey=CDS;gene=polA;product=5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease;protein_id=NP_418300.1;transl_table=11 NC_000913.3 RefSeq gene 4049899 4050007 . + . ID=gene3944;Dbxref=EcoGene:EG30098,GeneID:948354;Name=spf;gbkey=Gene;gene=spf;gene_biotype=antisense_RNA;gene_synonym=ECK3856,IS197,JWR0097;locus_tag=b3864 NC_000913.3 RefSeq ncRNA 4049899 4050007 . + . ID=rna151;Parent=gene3944;Dbxref=ASAP:ABE-0012621,EcoGene:EG30098,GeneID:948354;gbkey=ncRNA;gene=spf;ncrna_class=antisense_RNA;product=Spot 42 sRNA antisense regulator of galK translation%2C Hfq-dependent NC_000913.3 RefSeq exon 4049899 4050007 . + . ID=id498;Parent=rna151;Dbxref=ASAP:ABE-0012621,EcoGene:EG30098,GeneID:948354;gbkey=ncRNA;gene=spf;ncrna_class=antisense_RNA;product=Spot 42 sRNA antisense regulator of galK translation%2C Hfq-dependent NC_000913.3 RefSeq repeat_region 4050033 4050111 . + . ID=id499;Note=RIP293 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4050133 4050765 . - . ID=gene3945;Dbxref=EcoGene:EG11203,GeneID:948358;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;gene_synonym=ECK3857,engB,JW5930;locus_tag=b3865 NC_000913.3 RefSeq CDS 4050133 4050765 . - 0 ID=cds3792;Parent=gene3945;Dbxref=ASAP:ABE-0012623,UniProtKB/Swiss-Prot:P0A6P7,Genbank:NP_418301.3,EcoGene:EG11203,GeneID:948358;Name=NP_418301.3;Note=GTPase essential for cell cycle;gbkey=CDS;gene=yihA;product=cell division GTP-binding protein;protein_id=NP_418301.3;transl_table=11 NC_000913.3 RefSeq gene 4051036 4051280 . + . ID=gene3946;Dbxref=EcoGene:EG31134,GeneID:2847776;Name=csrC;gbkey=Gene;gene=csrC;gene_biotype=ncRNA;gene_synonym=ECK3858,IS198,JWR0214,psrA21,ryiB,sraK,tpk2;locus_tag=b4457 NC_000913.3 RefSeq ncRNA 4051036 4051280 . + . ID=rna152;Parent=gene3946;Dbxref=ASAP:ABE-0047275,EcoGene:EG31134,GeneID:2847776;Note=CsrC regulatory RNA~binds global regulatory protein CsrA%2C antagonizing CsrA regulation;gbkey=ncRNA;gene=csrC;ncrna_class=other;product=CsrC sRNA sequesters CsrA%2C a carbon flux regulator NC_000913.3 RefSeq exon 4051036 4051280 . + . ID=id500;Parent=rna152;Dbxref=ASAP:ABE-0047275,EcoGene:EG31134,GeneID:2847776;Note=CsrC regulatory RNA~binds global regulatory protein CsrA%2C antagonizing CsrA regulation;gbkey=ncRNA;gene=csrC;ncrna_class=other;product=CsrC sRNA sequesters CsrA%2C a carbon flux regulator NC_000913.3 RefSeq gene 4051347 4051856 . + . ID=gene3947;Dbxref=EcoGene:EG11835,GeneID:948363;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;gene_synonym=ECK3859,JW3837;locus_tag=b3866 NC_000913.3 RefSeq CDS 4051347 4051856 . + 0 ID=cds3793;Parent=gene3947;Dbxref=ASAP:ABE-0012626,UniProtKB/Swiss-Prot:P0A8H6,Genbank:NP_418302.1,EcoGene:EG11835,GeneID:948363;Name=NP_418302.1;gbkey=CDS;gene=yihI;product=activator of Der GTPase;protein_id=NP_418302.1;transl_table=11 NC_000913.3 RefSeq gene 4052045 4053418 . + . ID=gene3948;Dbxref=EcoGene:EG11836,GeneID:948362;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;gene_synonym=ECK3860,JW3838,yihJ;locus_tag=b3867 NC_000913.3 RefSeq CDS 4052045 4053418 . + 0 ID=cds3794;Parent=gene3948;Dbxref=ASAP:ABE-0012629,UniProtKB/Swiss-Prot:P32131,Genbank:NP_418303.2,EcoGene:EG11836,GeneID:948362;Name=NP_418303.2;Note=O2-independent coproporphyrinogen III oxidase;gbkey=CDS;gene=hemN;product=coproporphyrinogen III oxidase%2C SAM and NAD(P)H dependent%2C oxygen-independent;protein_id=NP_418303.2;transl_table=11 NC_000913.3 RefSeq repeat_region 4053530 4053613 . + . ID=id501;Note=REP294 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4053647 4053757 . - . ID=gene3949;Dbxref=EcoGene:EG14491,GeneID:7751621;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;gene_synonym=ECK4501;locus_tag=b4686 NC_000913.3 RefSeq CDS 4053647 4053757 . - 0 ID=cds3795;Parent=gene3949;Dbxref=UniProtKB/Swiss-Prot:C1P620,Genbank:YP_002791260.1,EcoGene:EG14491,GeneID:7751621;Name=YP_002791260.1;gbkey=CDS;gene=yshB;product=uncharacterized protein;protein_id=YP_002791260.1;transl_table=11 NC_000913.3 RefSeq gene 4053869 4055278 . - . ID=gene3950;Dbxref=EcoGene:EG10385,GeneID:948361;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;gene_synonym=ECK3861,glnT,JW3839,ntrC;locus_tag=b3868 NC_000913.3 RefSeq CDS 4053869 4055278 . - 0 ID=cds3796;Parent=gene3950;Dbxref=ASAP:ABE-0012632,UniProtKB/Swiss-Prot:P0AFB8,Genbank:NP_418304.1,EcoGene:EG10385,GeneID:948361;Name=NP_418304.1;Note=response regulator for gln (sensor glnL) (nitrogen regulator I%2C NRI);gbkey=CDS;gene=glnG;product=fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein;protein_id=NP_418304.1;transl_table=11 NC_000913.3 RefSeq gene 4055290 4056339 . - . ID=gene3951;Dbxref=EcoGene:EG10387,GeneID:948360;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;gene_synonym=ECK3862,glnR,JW3840,ntrB;locus_tag=b3869 NC_000913.3 RefSeq CDS 4055290 4056339 . - 0 ID=cds3797;Parent=gene3951;Dbxref=ASAP:ABE-0012634,UniProtKB/Swiss-Prot:P0AFB5,Genbank:NP_418305.1,EcoGene:EG10387,GeneID:948360;Name=NP_418305.1;Note=histidine protein kinase sensor for GlnG regulator (nitrogen regulator II%2C NRII);gbkey=CDS;gene=glnL;product=sensory histidine kinase in two-component regulatory system with GlnG;protein_id=NP_418305.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4056471 4056555 . + . ID=id502;Note=REP295 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4056625 4058034 . - . ID=gene3952;Dbxref=EcoGene:EG10383,GeneID:948370;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;gene_synonym=ECK3863,JW3841;locus_tag=b3870 NC_000913.3 RefSeq CDS 4056625 4058034 . - 0 ID=cds3798;Parent=gene3952;Dbxref=ASAP:ABE-0012640,UniProtKB/Swiss-Prot:P0A9C5,Genbank:NP_418306.1,EcoGene:EG10383,GeneID:948370;Name=NP_418306.1;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=NP_418306.1;transl_table=11 NC_000913.3 RefSeq gene 4058407 4060230 . + . ID=gene3953;Dbxref=EcoGene:EG11837,GeneID:948369;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;gene_synonym=bipA,ECK3864,JW5571,yihK;locus_tag=b3871 NC_000913.3 RefSeq CDS 4058407 4060230 . + 0 ID=cds3799;Parent=gene3953;Dbxref=ASAP:ABE-0012648,UniProtKB/Swiss-Prot:P32132,Genbank:YP_026274.1,EcoGene:EG11837,GeneID:948369;Name=YP_026274.1;gbkey=CDS;gene=typA;product=GTP-binding protein;protein_id=YP_026274.1;transl_table=11 NC_000913.3 RefSeq gene 4060447 4061157 . + . ID=gene3954;Dbxref=EcoGene:EG11838,GeneID:948368;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;gene_synonym=ECK3865,JW3843;locus_tag=b3872 NC_000913.3 RefSeq CDS 4060447 4061157 . + 0 ID=cds3800;Parent=gene3954;Dbxref=ASAP:ABE-0012651,UniProtKB/Swiss-Prot:P0ACM9,Genbank:NP_418308.1,EcoGene:EG11838,GeneID:948368;Name=NP_418308.1;Note=putative transcriptional regulator;gbkey=CDS;gene=yihL;product=putative DNA-binding transcriptional regulator;protein_id=NP_418308.1;transl_table=11 NC_000913.3 RefSeq gene 4061165 4062145 . + . ID=gene3955;Dbxref=EcoGene:EG11839,GeneID:948367;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;gene_synonym=ECK3866,JW3844;locus_tag=b3873 NC_000913.3 RefSeq CDS 4061165 4062145 . + 0 ID=cds3801;Parent=gene3955;Dbxref=ASAP:ABE-0012653,UniProtKB/Swiss-Prot:P32134,Genbank:NP_418309.1,EcoGene:EG11839,GeneID:948367;Name=NP_418309.1;gbkey=CDS;gene=yihM;product=putative sugar phosphate isomerase;protein_id=NP_418309.1;transl_table=11 NC_000913.3 RefSeq gene 4062247 4063512 . + . ID=gene3956;Dbxref=EcoGene:EG11840,GeneID:948365;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;gene_synonym=ECK3867,JW3845;locus_tag=b3874 NC_000913.3 RefSeq CDS 4062247 4063512 . + 0 ID=cds3802;Parent=gene3956;Dbxref=ASAP:ABE-0012656,UniProtKB/Swiss-Prot:P32135,Genbank:NP_418310.1,EcoGene:EG11840,GeneID:948365;Name=NP_418310.1;Note=putative resistance protein (transport);gbkey=CDS;gene=yihN;product=MFS transporter family protein;protein_id=NP_418310.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4063519 4063593 . + . ID=id503;Note=REP296 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4063603 4064295 . - . ID=gene3957;Dbxref=EcoGene:EG13374,GeneID:948366;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;gene_synonym=ECK3868,JW3846,yshA;locus_tag=b3875 NC_000913.3 RefSeq CDS 4063603 4064295 . - 0 ID=cds3803;Parent=gene3957;Dbxref=ASAP:ABE-0012659,UniProtKB/Swiss-Prot:P76773,Genbank:NP_418311.1,EcoGene:EG13374,GeneID:948366;Name=NP_418311.1;gbkey=CDS;gene=ompL;product=outer membrane porin L%3B putative sulpholipid porin;protein_id=NP_418311.1;transl_table=11 NC_000913.3 RefSeq gene 4064363 4065766 . - . ID=gene3958;Dbxref=EcoGene:EG11841,GeneID:948377;Name=yihO;gbkey=Gene;gene=yihO;gene_biotype=protein_coding;gene_synonym=ECK3869,JW5852,squO;locus_tag=b3876 NC_000913.3 RefSeq CDS 4064363 4065766 . - 0 ID=cds3804;Parent=gene3958;Dbxref=ASAP:ABE-0012661,UniProtKB/Swiss-Prot:P32136,Genbank:YP_026275.1,EcoGene:EG11841,GeneID:948377;Name=YP_026275.1;Note=putative permease;gbkey=CDS;gene=yihO;product=putative sulphoquinovose importer;protein_id=YP_026275.1;transl_table=11 NC_000913.3 RefSeq gene 4065809 4067194 . - . ID=gene3959;Dbxref=EcoGene:EG11842,GeneID:948371;Name=yihP;gbkey=Gene;gene=yihP;gene_biotype=protein_coding;gene_synonym=ECK3870,JW3848,squP;locus_tag=b3877 NC_000913.3 RefSeq CDS 4065809 4067194 . - 0 ID=cds3805;Parent=gene3959;Dbxref=ASAP:ABE-0012664,UniProtKB/Swiss-Prot:P32137,Genbank:NP_418313.4,EcoGene:EG11842,GeneID:948371;Name=NP_418313.4;Note=putative permease;gbkey=CDS;gene=yihP;product=putative 2%2C3-dihydroxypropane-1-sulphonate exporter%2C membrane protein;protein_id=NP_418313.4;transl_table=11 NC_000913.3 RefSeq gene 4067240 4069276 . - . ID=gene3960;Dbxref=EcoGene:EG11843,GeneID:948376;Name=yihQ;gbkey=Gene;gene=yihQ;gene_biotype=protein_coding;gene_synonym=ECK3871,JW3849,squQ;locus_tag=b3878 NC_000913.3 RefSeq CDS 4067240 4069276 . - 0 ID=cds3806;Parent=gene3960;Dbxref=ASAP:ABE-0012666,UniProtKB/Swiss-Prot:P32138,Genbank:NP_418314.1,EcoGene:EG11843,GeneID:948376;Name=NP_418314.1;Note=putative glycosidase;gbkey=CDS;gene=yihQ;product=putative sulpholipid alpha-glucosidase%3B alpha-glucosyl fluoride glucosidase;protein_id=NP_418314.1;transl_table=11 NC_000913.3 RefSeq gene 4069475 4070401 . - . ID=gene3961;Dbxref=EcoGene:EG11844,GeneID:948375;Name=yihR;gbkey=Gene;gene=yihR;gene_biotype=protein_coding;gene_synonym=ECK3872,JW3850,squR;locus_tag=b3879 NC_000913.3 RefSeq CDS 4069475 4070401 . - 0 ID=cds3807;Parent=gene3961;Dbxref=ASAP:ABE-0012669,UniProtKB/Swiss-Prot:P32139,Genbank:NP_418315.3,EcoGene:EG11844,GeneID:948375;Name=NP_418315.3;Note=putative aldose-1-epimerase;gbkey=CDS;gene=yihR;product=putative sulphoquinovose mutarotase;protein_id=NP_418315.3;transl_table=11 NC_000913.3 RefSeq gene 4070515 4071756 . - . ID=gene3962;Dbxref=EcoGene:EG11845,GeneID:948374;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;gene_synonym=ECK3873,JW5569,manC?,squS;locus_tag=b3880 NC_000913.3 RefSeq CDS 4070515 4071756 . - 0 ID=cds3808;Parent=gene3962;Dbxref=ASAP:ABE-0012673,UniProtKB/Swiss-Prot:P32140,Genbank:NP_418316.4,EcoGene:EG11845,GeneID:948374;Name=NP_418316.4;gbkey=CDS;gene=yihS;product=sulphoquinovose isomerase;protein_id=NP_418316.4;transl_table=11 NC_000913.3 RefSeq gene 4071773 4072651 . - . ID=gene3963;Dbxref=EcoGene:EG11846,GeneID:948373;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;gene_synonym=ECK3874,JW3852,squT;locus_tag=b3881 NC_000913.3 RefSeq CDS 4071773 4072651 . - 0 ID=cds3809;Parent=gene3963;Dbxref=ASAP:ABE-0012675,UniProtKB/Swiss-Prot:P32141,Genbank:NP_418317.1,EcoGene:EG11846,GeneID:948373;Name=NP_418317.1;Note=putative aldolase;gbkey=CDS;gene=yihT;product=6-deoxy-6-sulphofructose-1-phosphate aldolase;protein_id=NP_418317.1;transl_table=11 NC_000913.3 RefSeq gene 4072675 4073571 . - . ID=gene3964;Dbxref=EcoGene:EG11847,GeneID:948372;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;gene_synonym=ECK3875,JW3853,squU;locus_tag=b3882 NC_000913.3 RefSeq CDS 4072675 4073571 . - 0 ID=cds3810;Parent=gene3964;Dbxref=ASAP:ABE-0012678,UniProtKB/Swiss-Prot:P0A9V8,Genbank:NP_418318.1,EcoGene:EG11847,GeneID:948372;Name=NP_418318.1;Note=putative dehydrogenase;gbkey=CDS;gene=yihU;product=3-sulpholactaldehyde (SLA) reductase%2C NADH-dependent%3B gamma-hydroxybutyrate dehydrogenase%2C NADH-dependent;protein_id=NP_418318.1;transl_table=11 NC_000913.3 RefSeq gene 4073739 4074635 . + . ID=gene3965;Dbxref=EcoGene:EG11848,GeneID:948382;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;gene_synonym=ECK3876,JW5568,squV;locus_tag=b3883 NC_000913.3 RefSeq CDS 4073739 4074635 . + 0 ID=cds3811;Parent=gene3965;Dbxref=ASAP:ABE-0012681,UniProtKB/Swiss-Prot:P32143,Genbank:NP_418319.2,EcoGene:EG11848,GeneID:948382;Name=NP_418319.2;Note=putative kinase;gbkey=CDS;gene=yihV;product=6-deoxy-6-sulphofructose kinase;protein_id=NP_418319.2;transl_table=11 NC_000913.3 RefSeq gene 4074669 4075454 . + . ID=gene3966;Dbxref=EcoGene:EG11849,GeneID:948381;Name=yihW;gbkey=Gene;gene=yihW;gene_biotype=protein_coding;gene_synonym=ECK3877,JW5567,squW;locus_tag=b3884 NC_000913.3 RefSeq CDS 4074669 4075454 . + 0 ID=cds3812;Parent=gene3966;Dbxref=ASAP:ABE-0012683,UniProtKB/Swiss-Prot:P32144,Genbank:NP_418320.2,EcoGene:EG11849,GeneID:948381;Name=NP_418320.2;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=yihW;product=putative transcriptional regulator for sulphoquinovose utilization;protein_id=NP_418320.2;transl_table=11 NC_000913.3 RefSeq gene 4075553 4076152 . + . ID=gene3967;Dbxref=EcoGene:EG11850,GeneID:948380;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;gene_synonym=ECK3878,JW5566;locus_tag=b3885 NC_000913.3 RefSeq CDS 4075553 4076152 . + 0 ID=cds3813;Parent=gene3967;Dbxref=ASAP:ABE-0012686,UniProtKB/Swiss-Prot:P0A8Y3,Genbank:NP_418321.4,EcoGene:EG11850,GeneID:948380;Name=NP_418321.4;Note=putative phosphatase;gbkey=CDS;gene=yihX;product=alpha-D-glucose-1-phosphate phosphatase%2C anomer-specific;protein_id=NP_418321.4;transl_table=11 NC_000913.3 RefSeq gene 4076146 4077018 . + . ID=gene3968;Dbxref=EcoGene:EG11851,GeneID:948379;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;gene_synonym=ECK3879,JW3857,rbn;locus_tag=b3886 NC_000913.3 RefSeq CDS 4076146 4077018 . + 0 ID=cds3814;Parent=gene3968;Dbxref=ASAP:ABE-0012688,UniProtKB/Swiss-Prot:P0A8K8,Genbank:NP_418322.1,EcoGene:EG11851,GeneID:948379;Name=NP_418322.1;Note=tRNA processing exoribonuclease BN;gbkey=CDS;gene=yihY;product=BrkB family putative transporter%2C inner membrane protein;protein_id=NP_418322.1;transl_table=11 NC_000913.3 RefSeq gene 4077015 4077452 . + . ID=gene3969;Dbxref=EcoGene:EG11852,GeneID:948378;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;gene_synonym=ECK3880,JW3858,yihZ;locus_tag=b3887 NC_000913.3 RefSeq CDS 4077015 4077452 . + 0 ID=cds3815;Parent=gene3969;Dbxref=ASAP:ABE-0012690,UniProtKB/Swiss-Prot:P0A6M4,Genbank:NP_418323.1,EcoGene:EG11852,GeneID:948378;Name=NP_418323.1;gbkey=CDS;gene=dtd;product=D-tyr-tRNA(Tyr) deacylase;protein_id=NP_418323.1;transl_table=11 NC_000913.3 RefSeq gene 4077449 4078438 . + . ID=gene3970;Dbxref=EcoGene:EG11853,GeneID:948387;Name=yiiD;gbkey=Gene;gene=yiiD;gene_biotype=protein_coding;gene_synonym=ECK3881,JW3859;locus_tag=b3888 NC_000913.3 RefSeq CDS 4077449 4078438 . + 0 ID=cds3816;Parent=gene3970;Dbxref=ASAP:ABE-0012692,UniProtKB/Swiss-Prot:P0ADQ2,Genbank:NP_418324.1,EcoGene:EG11853,GeneID:948387;Name=NP_418324.1;Note=putative acetyltransferase;gbkey=CDS;gene=yiiD;product=GNAT family putative N-acetyltransferase;protein_id=NP_418324.1;transl_table=11 NC_000913.3 RefSeq gene 4079297 4079509 . + . ID=gene3971;Dbxref=EcoGene:EG11854,GeneID:948386;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;gene_synonym=ECK3882,JW5929;locus_tag=b3889 NC_000913.3 RefSeq CDS 4079297 4079509 . + 0 ID=cds3817;Parent=gene3971;Dbxref=ASAP:ABE-0012696,UniProtKB/Swiss-Prot:P0ADQ5,Genbank:NP_418325.3,EcoGene:EG11854,GeneID:948386;Name=NP_418325.3;gbkey=CDS;gene=yiiE;product=CopG family putative transcriptional regulator;protein_id=NP_418325.3;transl_table=11 NC_000913.3 RefSeq gene 4079751 4079969 . + . ID=gene3972;Dbxref=EcoGene:EG11855,GeneID:948385;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;gene_synonym=ECK3883,JW5563;locus_tag=b3890 NC_000913.3 RefSeq CDS 4079751 4079969 . + 0 ID=cds3818;Parent=gene3972;Dbxref=ASAP:ABE-0012700,UniProtKB/Swiss-Prot:P0AFU6,Genbank:NP_418326.2,EcoGene:EG11855,GeneID:948385;Name=NP_418326.2;gbkey=CDS;gene=yiiF;product=putative thymol sensitivity protein%2C CopG family putative transcriptional regulator;protein_id=NP_418326.2;transl_table=11 NC_000913.3 RefSeq repeat_region 4080020 4080117 . + . ID=id504;Note=REP297 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4080299 4081228 . - . ID=gene3973;Dbxref=EcoGene:EG10284,GeneID:948384;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;gene_synonym=ECK3884,JW3862;locus_tag=b3891 NC_000913.3 RefSeq CDS 4080299 4081228 . - 0 ID=cds3819;Parent=gene3973;Dbxref=ASAP:ABE-0012703,UniProtKB/Swiss-Prot:P13024,Genbank:NP_418327.1,EcoGene:EG10284,GeneID:948384;Name=NP_418327.1;Note=affects formate dehydrogenase-N;gbkey=CDS;gene=fdhE;product=formate dehydrogenase formation protein;protein_id=NP_418327.1;transl_table=11 NC_000913.3 RefSeq gene 4081225 4081860 . - . ID=gene3974;Dbxref=EcoGene:EG11856,GeneID:948383;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;gene_synonym=ECK3885,JW3863;locus_tag=b3892 NC_000913.3 RefSeq CDS 4081225 4081860 . - 0 ID=cds3820;Parent=gene3974;Dbxref=ASAP:ABE-0012705,UniProtKB/Swiss-Prot:P0AEL0,Genbank:NP_418328.1,EcoGene:EG11856,GeneID:948383;Name=NP_418328.1;Note=formate dehydrogenase%2C cytochrome B556 (FDO) subunit;gbkey=CDS;gene=fdoI;product=formate dehydrogenase-O%2C cytochrome b556 subunit;protein_id=NP_418328.1;transl_table=11 NC_000913.3 RefSeq gene 4081857 4082759 . - . ID=gene3975;Dbxref=EcoGene:EG11857,GeneID:948395;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;gene_synonym=ECK3886,JW3864;locus_tag=b3893 NC_000913.3 RefSeq CDS 4081857 4082759 . - 0 ID=cds3821;Parent=gene3975;Dbxref=ASAP:ABE-0012708,UniProtKB/Swiss-Prot:P0AAJ5,Genbank:NP_418329.1,EcoGene:EG11857,GeneID:948395;Name=NP_418329.1;Note=formate dehydrogenase-O%2C iron-sulfur subunit;gbkey=CDS;gene=fdoH;product=formate dehydrogenase-O%2C Fe-S subunit;protein_id=NP_418329.1;transl_table=11 NC_000913.3 RefSeq gene 4082772 4085822 . - . ID=gene3976;Dbxref=EcoGene:EG11858,GeneID:948394;Name=fdoG;gbkey=Gene;gene=fdoG;gene_biotype=protein_coding;gene_synonym=ECK3887,JW3865;locus_tag=b3894 NC_000913.3 RefSeq CDS 4082772 4085822 . - 0 ID=cds3822;Parent=gene3976;Dbxref=ASAP:ABE-0012710,UniProtKB/Swiss-Prot:P32176,Genbank:NP_418330.1,EcoGene:EG11858,GeneID:948394;Name=NP_418330.1;Note=formate dehydrogenase-O%2C major subunit;gbkey=CDS;gene=fdoG;product=formate dehydrogenase-O%2C large subunit;protein_id=NP_418330.1;transl_except=(pos:complement(4085235..4085237)%2Caa:Sec);transl_table=11 NC_000913.3 RefSeq gene 4086016 4086849 . + . ID=gene3977;Dbxref=EcoGene:EG11859,GeneID:948393;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;gene_synonym=ECK3888,JW3866;locus_tag=b3895 NC_000913.3 RefSeq CDS 4086016 4086849 . + 0 ID=cds3823;Parent=gene3977;Dbxref=ASAP:ABE-0012714,UniProtKB/Swiss-Prot:P32177,Genbank:NP_418331.1,EcoGene:EG11859,GeneID:948393;Name=NP_418331.1;Note=affects formate dehydrogenase-N;gbkey=CDS;gene=fdhD;product=formate dehydrogenase formation protein;protein_id=NP_418331.1;transl_table=11 NC_000913.3 RefSeq gene 4087002 4088057 . + . ID=gene3978;Dbxref=EcoGene:EG11860,GeneID:948392;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;gene_synonym=ECK3889,JW3867;locus_tag=b3896 NC_000913.3 RefSeq CDS 4087002 4088057 . + 0 ID=cds3824;Parent=gene3978;Dbxref=ASAP:ABE-0012718,UniProtKB/Swiss-Prot:P32151,Genbank:NP_418332.1,EcoGene:EG11860,GeneID:948392;Name=NP_418332.1;gbkey=CDS;gene=yiiG;product=DUF3829 family lipoprotein;protein_id=NP_418332.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4088081 4088101 . + . ID=id505;Note=REP298 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4088107 4089855 . - . ID=gene3979;Dbxref=EcoGene:EG11861,GeneID:948389;Name=frvR;gbkey=Gene;gene=frvR;gene_biotype=protein_coding;gene_synonym=ECK3890,JW3868,yiiH;locus_tag=b3897 NC_000913.3 RefSeq CDS 4088107 4089855 . - 0 ID=cds3825;Parent=gene3979;Dbxref=ASAP:ABE-0012720,UniProtKB/Swiss-Prot:P32152,Genbank:NP_418333.1,EcoGene:EG11861,GeneID:948389;Name=NP_418333.1;Note=putative frv operon regulatory protein;gbkey=CDS;gene=frvR;product=putative frv operon regulator%3B contains a PTS EIIA domain;protein_id=NP_418333.1;transl_table=11 NC_000913.3 RefSeq gene 4089855 4090925 . - . ID=gene3980;Dbxref=EcoGene:EG11862,GeneID:948388;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;gene_synonym=ECK3891,JW3869,yiiI;locus_tag=b3898 NC_000913.3 RefSeq CDS 4089855 4090925 . - 0 ID=cds3826;Parent=gene3980;Dbxref=ASAP:ABE-0012722,UniProtKB/Swiss-Prot:P32153,Genbank:NP_418334.1,EcoGene:EG11862,GeneID:948388;Name=NP_418334.1;Note=frv operon protein;gbkey=CDS;gene=frvX;product=putative peptidase;protein_id=NP_418334.1;transl_table=11 NC_000913.3 RefSeq gene 4090915 4092366 . - . ID=gene3981;Dbxref=EcoGene:EG11863,GeneID:948390;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;gene_synonym=ECK3892,JW5562,yiiJ;locus_tag=b3899 NC_000913.3 RefSeq CDS 4090915 4092366 . - 0 ID=cds3827;Parent=gene3981;Dbxref=ASAP:ABE-0012725,UniProtKB/Swiss-Prot:P32154,Genbank:NP_418335.4,EcoGene:EG11863,GeneID:948390;Name=NP_418335.4;Note=PTS system%2C fructose-like enzyme IIBC component;gbkey=CDS;gene=frvB;product=putative PTS enzyme%2C IIB component/IIC component;protein_id=NP_418335.4;transl_table=11 NC_000913.3 RefSeq gene 4092377 4092823 . - . ID=gene3982;Dbxref=EcoGene:EG11864,GeneID:948391;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;gene_synonym=ECK3893,JW3871,yiiK;locus_tag=b3900 NC_000913.3 RefSeq CDS 4092377 4092823 . - 0 ID=cds3828;Parent=gene3982;Dbxref=ASAP:ABE-0012727,UniProtKB/Swiss-Prot:P32155,Genbank:NP_418336.1,EcoGene:EG11864,GeneID:948391;Name=NP_418336.1;Note=PTS system%2C fructose-specific IIA component;gbkey=CDS;gene=frvA;product=putative enzyme IIA component of PTS;protein_id=NP_418336.1;transl_table=11 NC_000913.3 RefSeq gene 4093124 4093438 . - . ID=gene3983;Dbxref=EcoGene:EG11865,GeneID:948402;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;gene_synonym=ECK3894,JW3872,yiiL;locus_tag=b3901 NC_000913.3 RefSeq CDS 4093124 4093438 . - 0 ID=cds3829;Parent=gene3983;Dbxref=ASAP:ABE-0012729,UniProtKB/Swiss-Prot:P32156,Genbank:NP_418337.1,EcoGene:EG11865,GeneID:948402;Name=NP_418337.1;gbkey=CDS;gene=rhaM;product=L-rhamnose mutarotase;protein_id=NP_418337.1;transl_table=11 NC_000913.3 RefSeq gene 4093448 4094272 . - . ID=gene3984;Dbxref=EcoGene:EG11866,GeneID:948401;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;gene_synonym=ECK3895,JW3873;locus_tag=b3902 NC_000913.3 RefSeq CDS 4093448 4094272 . - 0 ID=cds3830;Parent=gene3984;Dbxref=ASAP:ABE-0012731,UniProtKB/Swiss-Prot:P32169,Genbank:NP_418338.1,EcoGene:EG11866,GeneID:948401;Name=NP_418338.1;Note=rhamnulose-phosphate aldolase;gbkey=CDS;gene=rhaD;product=rhamnulose-1-phosphate aldolase;protein_id=NP_418338.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4094316 4094717 . + . ID=id506;Note=REP299 (repetitive extragenic palindromic) element%3B contains 9 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4094723 4095982 . - . ID=gene3985;Dbxref=EcoGene:EG11867,GeneID:948400;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;gene_synonym=ECK3896,JW5561;locus_tag=b3903 NC_000913.3 RefSeq CDS 4094723 4095982 . - 0 ID=cds3831;Parent=gene3985;Dbxref=ASAP:ABE-0012736,UniProtKB/Swiss-Prot:P32170,Genbank:YP_026276.1,EcoGene:EG11867,GeneID:948400;Name=YP_026276.1;gbkey=CDS;gene=rhaA;product=L-rhamnose isomerase;protein_id=YP_026276.1;transl_table=11 NC_000913.3 RefSeq gene 4095979 4097448 . - . ID=gene3986;Dbxref=EcoGene:EG11868,GeneID:948399;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;gene_synonym=ECK3897,JW3875;locus_tag=b3904 NC_000913.3 RefSeq CDS 4095979 4097448 . - 0 ID=cds3832;Parent=gene3986;Dbxref=ASAP:ABE-0012738,UniProtKB/Swiss-Prot:P32171,Genbank:NP_418340.1,EcoGene:EG11868,GeneID:948399;Name=NP_418340.1;gbkey=CDS;gene=rhaB;product=rhamnulokinase;protein_id=NP_418340.1;transl_table=11 NC_000913.3 RefSeq gene 4097736 4098572 . + . ID=gene3987;Dbxref=EcoGene:EG10843,GeneID:948397;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;gene_synonym=ECK3898,JW3876,rhaC2;locus_tag=b3905 NC_000913.3 RefSeq CDS 4097736 4098572 . + 0 ID=cds3833;Parent=gene3987;Dbxref=ASAP:ABE-0012745,UniProtKB/Swiss-Prot:P09377,Genbank:NP_418341.1,EcoGene:EG10843,GeneID:948397;Name=NP_418341.1;Note=positive regulator for rhaBAD operon;gbkey=CDS;gene=rhaS;product=transcriptional activator of rhaBAD and rhaT;protein_id=NP_418341.1;transl_table=11 NC_000913.3 RefSeq gene 4098646 4099494 . + . ID=gene3988;Dbxref=EcoGene:EG10842,GeneID:948396;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;gene_synonym=ECK3899,JW3877,rhaC1;locus_tag=b3906 NC_000913.3 RefSeq CDS 4098646 4099494 . + 0 ID=cds3834;Parent=gene3988;Dbxref=ASAP:ABE-0012747,UniProtKB/Swiss-Prot:P09378,Genbank:NP_418342.2,EcoGene:EG10842,GeneID:948396;Name=NP_418342.2;Note=positive regulator for rhaRS operon;gbkey=CDS;gene=rhaR;product=transcriptional activator of rhaSR;protein_id=NP_418342.2;transl_table=11 NC_000913.3 RefSeq gene 4099491 4100525 . - . ID=gene3989;Dbxref=EcoGene:EG11313,GeneID:948398;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;gene_synonym=ECK3900,JW3878;locus_tag=b3907 NC_000913.3 RefSeq CDS 4099491 4100525 . - 0 ID=cds3835;Parent=gene3989;Dbxref=ASAP:ABE-0012749,UniProtKB/Swiss-Prot:P27125,Genbank:NP_418343.1,EcoGene:EG11313,GeneID:948398;Name=NP_418343.1;Note=rhamnose transport;gbkey=CDS;gene=rhaT;product=L-rhamnose:proton symporter;protein_id=NP_418343.1;transl_table=11 NC_000913.3 RefSeq gene 4100810 4101430 . + . ID=gene3990;Dbxref=EcoGene:EG10953,GeneID:948403;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;gene_synonym=ECK3901,JW3879;locus_tag=b3908 NC_000913.3 RefSeq CDS 4100810 4101430 . + 0 ID=cds3836;Parent=gene3990;Dbxref=ASAP:ABE-0012761,UniProtKB/Swiss-Prot:P00448,Genbank:NP_418344.3,EcoGene:EG10953,GeneID:948403;Name=NP_418344.3;Note=superoxide dismutase%2C manganese;gbkey=CDS;gene=sodA;product=superoxide dismutase%2C Mn;protein_id=NP_418344.3;transl_table=11 NC_000913.3 RefSeq gene 4101690 4102673 . + . ID=gene3991;Dbxref=EcoGene:EG11869,GeneID:948407;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;gene_synonym=ECK3902,JW5560;locus_tag=b3909 NC_000913.3 RefSeq CDS 4101690 4102673 . + 0 ID=cds3837;Parent=gene3991;Dbxref=ASAP:ABE-0012764,UniProtKB/Swiss-Prot:P0A712,Genbank:NP_418345.2,EcoGene:EG11869,GeneID:948407;Name=NP_418345.2;Note=2-keto-3-deoxy-D-gluconate transport system;gbkey=CDS;gene=kdgT;product=2-keto-3-deoxy-D-gluconate transporter;protein_id=NP_418345.2;transl_table=11 NC_000913.3 RefSeq repeat_region 4102696 4102721 . + . ID=id507;Note=REP300 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4102822 4103496 . + . ID=gene3992;Dbxref=EcoGene:EG11870,GeneID:948406;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;gene_synonym=ECK3903,JW5559;locus_tag=b3910 NC_000913.3 RefSeq CDS 4102822 4103496 . + 0 ID=cds3838;Parent=gene3992;Dbxref=ASAP:ABE-0012769,UniProtKB/Swiss-Prot:P32157,Genbank:NP_418346.2,EcoGene:EG11870,GeneID:948406;Name=NP_418346.2;gbkey=CDS;gene=yiiM;product=6-N-hydroxylaminopurine resistance protein;protein_id=NP_418346.2;transl_table=11 NC_000913.3 RefSeq repeat_region 4103507 4103590 . + . ID=id508;Note=REP301 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4103602 4104975 . - . ID=gene3993;Dbxref=EcoGene:EG10163,GeneID:948405;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;gene_synonym=ecfB,ECK3904,eup,JW3882,rssE,ssd;locus_tag=b3911 NC_000913.3 RefSeq CDS 4103602 4104975 . - 0 ID=cds3839;Parent=gene3993;Dbxref=ASAP:ABE-0012772,UniProtKB/Swiss-Prot:P0AE82,Genbank:NP_418347.1,EcoGene:EG10163,GeneID:948405;Name=NP_418347.1;Note=probable sensor protein (histidine protein kinase)%2C acting on arcA;gbkey=CDS;gene=cpxA;product=sensory histidine kinase in two-component regulatory system with CpxR;protein_id=NP_418347.1;transl_table=11 NC_000913.3 RefSeq gene 4104972 4105670 . - . ID=gene3994;Dbxref=EcoGene:EG10020,GeneID:948404;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;gene_synonym=ECK3905,JW3883,yiiA;locus_tag=b3912 NC_000913.3 RefSeq CDS 4104972 4105670 . - 0 ID=cds3840;Parent=gene3994;Dbxref=ASAP:ABE-0012774,UniProtKB/Swiss-Prot:P0AE88,Genbank:NP_418348.1,EcoGene:EG10020,GeneID:948404;Name=NP_418348.1;Note=transcriptional regulator in 2-component system;gbkey=CDS;gene=cpxR;product=response regulator in two-component regulatory system with CpxA;protein_id=NP_418348.1;transl_table=11 NC_000913.3 RefSeq gene 4105820 4106320 . + . ID=gene3995;Dbxref=EcoGene:EG11872,GeneID:2847688;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;gene_synonym=ECK3906,JW5558,yiiO;locus_tag=b4484 NC_000913.3 RefSeq CDS 4105820 4106320 . + 0 ID=cds3841;Parent=gene3995;Dbxref=ASAP:ABE-0174117,UniProtKB/Swiss-Prot:P0AE85,Genbank:YP_026277.1,EcoGene:EG11872,GeneID:2847688;Name=YP_026277.1;Note=periplasmic repressor of cpx regulon by interaction with CpxA;gbkey=CDS;gene=cpxP;product=inhibitor of the cpx response%3B periplasmic adaptor protein;protein_id=YP_026277.1;transl_table=11 NC_000913.3 RefSeq gene 4106469 4107371 . + . ID=gene3996;Dbxref=EcoGene:EG11873,GeneID:948413;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=ECK3907,JW3886,yiiP;locus_tag=b3915 NC_000913.3 RefSeq CDS 4106469 4107371 . + 0 ID=cds3842;Parent=gene3996;Dbxref=ASAP:ABE-0012786,UniProtKB/Swiss-Prot:P69380,Genbank:NP_418350.1,EcoGene:EG11873,GeneID:948413;Name=NP_418350.1;Note=putative transport system permease protein;gbkey=CDS;gene=fieF;product=ferrous iron and zinc transporter;protein_id=NP_418350.1;transl_table=11 NC_000913.3 RefSeq gene 4107552 4108514 . + . ID=gene3997;Dbxref=EcoGene:EG10699,GeneID:948412;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;gene_synonym=ECK3908,JW3887;locus_tag=b3916 NC_000913.3 RefSeq CDS 4107552 4108514 . + 0 ID=cds3843;Parent=gene3997;Dbxref=ASAP:ABE-0012789,UniProtKB/Swiss-Prot:P0A796,Genbank:NP_418351.1,EcoGene:EG10699,GeneID:948412;Name=NP_418351.1;gbkey=CDS;gene=pfkA;product=6-phosphofructokinase I;protein_id=NP_418351.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4108571 4108668 . + . ID=id509;Note=RIP302 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4108834 4109823 . + . ID=gene3998;Dbxref=EcoGene:EG10929,GeneID:948411;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;gene_synonym=ECK3909,JW3888;locus_tag=b3917 NC_000913.3 RefSeq CDS 4108834 4109823 . + 0 ID=cds3844;Parent=gene3998;Dbxref=ASAP:ABE-0012794,UniProtKB/Swiss-Prot:P0AG78,Genbank:NP_418352.1,EcoGene:EG10929,GeneID:948411;Name=NP_418352.1;Note=periplasmic sulfate-binding protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=sbp;product=sulfate transporter subunit;protein_id=NP_418352.1;transl_table=11 NC_000913.3 RefSeq gene 4109930 4110685 . + . ID=gene3999;Dbxref=EcoGene:EG10138,GeneID:948410;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;gene_synonym=ECK3910,JW3889,pnuE,ushB;locus_tag=b3918 NC_000913.3 RefSeq CDS 4109930 4110685 . + 0 ID=cds3845;Parent=gene3999;Dbxref=ASAP:ABE-0012797,UniProtKB/Swiss-Prot:P06282,Genbank:NP_418353.1,EcoGene:EG10138,GeneID:948410;Name=NP_418353.1;gbkey=CDS;gene=cdh;product=CDP-diacylglycerol phosphotidylhydrolase;protein_id=NP_418353.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4110710 4110728 . + . ID=id510;Note=REP303 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4110740 4111507 . - . ID=gene4000;Dbxref=EcoGene:EG11015,GeneID:948409;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;gene_synonym=ECK3911,JW3890,tpi;locus_tag=b3919 NC_000913.3 RefSeq CDS 4110740 4111507 . - 0 ID=cds3846;Parent=gene4000;Dbxref=ASAP:ABE-0012799,UniProtKB/Swiss-Prot:P0A858,Genbank:NP_418354.1,EcoGene:EG11015,GeneID:948409;Name=NP_418354.1;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=NP_418354.1;transl_table=11 NC_000913.3 RefSeq gene 4111615 4112214 . - . ID=gene4001;Dbxref=EcoGene:EG11874,GeneID:948408;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;gene_synonym=ECK3912,JW3891;locus_tag=b3920 NC_000913.3 RefSeq CDS 4111615 4112214 . - 0 ID=cds3847;Parent=gene4001;Dbxref=ASAP:ABE-0012802,UniProtKB/Swiss-Prot:P32160,Genbank:NP_418355.1,EcoGene:EG11874,GeneID:948408;Name=NP_418355.1;gbkey=CDS;gene=yiiQ;product=DUF1454 family putative periplasmic protein;protein_id=NP_418355.1;transl_table=11 NC_000913.3 RefSeq gene 4112315 4112755 . + . ID=gene4002;Dbxref=EcoGene:EG11875,GeneID:948417;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;gene_synonym=ECK3913,JW3892;locus_tag=b3921 NC_000913.3 RefSeq CDS 4112315 4112755 . + 0 ID=cds3848;Parent=gene4002;Dbxref=ASAP:ABE-0012809,UniProtKB/Swiss-Prot:P0AF34,Genbank:NP_418356.1,EcoGene:EG11875,GeneID:948417;Name=NP_418356.1;gbkey=CDS;gene=yiiR;product=DUF805 family putative inner membrane protein;protein_id=NP_418356.1;transl_table=11 NC_000913.3 RefSeq gene 4112967 4113266 . + . ID=gene4003;Dbxref=EcoGene:EG11876,GeneID:948416;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;gene_synonym=ECK3914,JW3893;locus_tag=b3922 NC_000913.3 RefSeq CDS 4112967 4113266 . + 0 ID=cds3849;Parent=gene4003;Dbxref=ASAP:ABE-0012813,UniProtKB/Swiss-Prot:P32162,Genbank:NP_418357.1,EcoGene:EG11876,GeneID:948416;Name=NP_418357.1;gbkey=CDS;gene=yiiS;product=UPF0381 family protein;protein_id=NP_418357.1;transl_table=11 NC_000913.3 RefSeq gene 4113293 4113721 . + . ID=gene4004;Dbxref=EcoGene:EG11877,GeneID:948415;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;gene_synonym=ECK3915,JW3894,yiiT;locus_tag=b3923 NC_000913.3 RefSeq CDS 4113293 4113721 . + 0 ID=cds3850;Parent=gene4004;Dbxref=ASAP:ABE-0012816,UniProtKB/Swiss-Prot:P0AAB8,Genbank:NP_418358.1,EcoGene:EG11877,GeneID:948415;Name=NP_418358.1;Note=putative regulator;gbkey=CDS;gene=uspD;product=stress-induced protein;protein_id=NP_418358.1;transl_table=11 NC_000913.3 RefSeq gene 4113726 4114472 . - . ID=gene4005;Dbxref=EcoGene:EG11518,GeneID:948414;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;gene_synonym=ECK3916,flxR,JW3895;locus_tag=b3924 NC_000913.3 RefSeq CDS 4113726 4114472 . - 0 ID=cds3851;Parent=gene4005;Dbxref=ASAP:ABE-0012818,UniProtKB/Swiss-Prot:P28861,Genbank:NP_418359.1,EcoGene:EG11518,GeneID:948414;Name=NP_418359.1;gbkey=CDS;gene=fpr;product=ferredoxin-NADP reductase%3B flavodoxin reductase;protein_id=NP_418359.1;transl_table=11 NC_000913.3 RefSeq gene 4114569 4115579 . - . ID=gene4006;Dbxref=EcoGene:EG11517,GeneID:948424;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;gene_synonym=ECK3917,JW3896;locus_tag=b3925 NC_000913.3 RefSeq CDS 4114569 4115579 . - 0 ID=cds3852;Parent=gene4006;Dbxref=ASAP:ABE-0012821,UniProtKB/Swiss-Prot:P0A9C9,Genbank:NP_418360.1,EcoGene:EG11517,GeneID:948424;Name=NP_418360.1;Note=not required for growth on glycerol;gbkey=CDS;gene=glpX;product=fructose 1%2C6-bisphosphatase II;protein_id=NP_418360.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4115677 4115706 . + . ID=id511;Note=REP304 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4115714 4117222 . - . ID=gene4007;Dbxref=EcoGene:EG10398,GeneID:948423;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;gene_synonym=ECK3918,JW3897;locus_tag=b3926 NC_000913.3 RefSeq CDS 4115714 4117222 . - 0 ID=cds3853;Parent=gene4007;Dbxref=ASAP:ABE-0012825,UniProtKB/Swiss-Prot:P0A6F3,Genbank:NP_418361.1,EcoGene:EG10398,GeneID:948423;Name=NP_418361.1;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=NP_418361.1;transl_table=11 NC_000913.3 RefSeq gene 4117245 4118090 . - . ID=gene4008;Dbxref=EcoGene:EG10396,GeneID:948422;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;gene_synonym=ECK3919,JW3898;locus_tag=b3927 NC_000913.3 RefSeq CDS 4117245 4118090 . - 0 ID=cds3854;Parent=gene4008;Dbxref=ASAP:ABE-0012828,UniProtKB/Swiss-Prot:P0AER0,Genbank:NP_418362.1,EcoGene:EG10396,GeneID:948422;Name=NP_418362.1;Note=facilitated diffusion of glycerol;gbkey=CDS;gene=glpF;product=glycerol facilitator;protein_id=NP_418362.1;transl_table=11 NC_000913.3 RefSeq gene 4118515 4118760 . + . ID=gene4009;Dbxref=EcoGene:EG11878,GeneID:948420;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;gene_synonym=ECK3920,JW3899,yiiU;locus_tag=b3928 NC_000913.3 RefSeq CDS 4118515 4118760 . + 0 ID=cds3855;Parent=gene4009;Dbxref=ASAP:ABE-0012835,UniProtKB/Swiss-Prot:P0AF36,Genbank:NP_418363.1,EcoGene:EG11878,GeneID:948420;Name=NP_418363.1;gbkey=CDS;gene=zapB;product=FtsZ stabilizer%2C septal ring assembly factor%2C cell division stimulator;protein_id=NP_418363.1;transl_table=11 NC_000913.3 RefSeq gene 4118845 4119330 . - . ID=gene4010;Dbxref=EcoGene:EG11879,GeneID:948419;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;gene_synonym=ECK3921,JW3900,menG,yiiV;locus_tag=b3929 NC_000913.3 RefSeq CDS 4118845 4119330 . - 0 ID=cds3856;Parent=gene4010;Dbxref=ASAP:ABE-0012837,UniProtKB/Swiss-Prot:P0A8R0,Genbank:NP_418364.1,EcoGene:EG11879,GeneID:948419;Name=NP_418364.1;gbkey=CDS;gene=rraA;product=ribonuclease E (RNase E) inhibitor protein;protein_id=NP_418364.1;transl_table=11 NC_000913.3 RefSeq gene 4119423 4120349 . - . ID=gene4011;Dbxref=EcoGene:EG11880,GeneID:948418;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;gene_synonym=ECK3922,JW3901,yiiW;locus_tag=b3930 NC_000913.3 RefSeq CDS 4119423 4120349 . - 0 ID=cds3857;Parent=gene4011;Dbxref=ASAP:ABE-0012841,UniProtKB/Swiss-Prot:P32166,Genbank:NP_418365.1,EcoGene:EG11880,GeneID:948418;Name=NP_418365.1;Note=1%2C4-dihydroxy-2-naphthoate --> dimethylmenaquinone;gbkey=CDS;gene=menA;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=NP_418365.1;transl_table=11 NC_000913.3 RefSeq gene 4120416 4121747 . - . ID=gene4012;Dbxref=EcoGene:EG11881,GeneID:948430;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;gene_synonym=clpY,ECK3923,htpI,JW3902;locus_tag=b3931 NC_000913.3 RefSeq CDS 4120416 4121747 . - 0 ID=cds3858;Parent=gene4012;Dbxref=ASAP:ABE-0012843,UniProtKB/Swiss-Prot:P0A6H5,Genbank:NP_418366.1,EcoGene:EG11881,GeneID:948430;Name=NP_418366.1;Note=heat shock protein hslVU%2C ATPase subunit%2C homologous to chaperones;gbkey=CDS;gene=hslU;product=molecular chaperone and ATPase component of HslUV protease;protein_id=NP_418366.1;transl_table=11 NC_000913.3 RefSeq gene 4121757 4122287 . - . ID=gene4013;Dbxref=EcoGene:EG11676,GeneID:948429;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;gene_synonym=clpQ,ECK3924,htpO,JW3903,yiiC;locus_tag=b3932 NC_000913.3 RefSeq CDS 4121757 4122287 . - 0 ID=cds3859;Parent=gene4013;Dbxref=ASAP:ABE-0012845,UniProtKB/Swiss-Prot:P0A7B8,Genbank:NP_418367.1,EcoGene:EG11676,GeneID:948429;Name=NP_418367.1;Note=heat shock protein hslVU%2C proteasome-related peptidase subunit;gbkey=CDS;gene=hslV;product=peptidase component of the HslUV protease;protein_id=NP_418367.1;transl_table=11 NC_000913.3 RefSeq gene 4122380 4123339 . - . ID=gene4014;Dbxref=EcoGene:EG11529,GeneID:948428;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;gene_synonym=ECK3925,JW3904,msgA;locus_tag=b3933 NC_000913.3 RefSeq CDS 4122380 4123339 . - 0 ID=cds3860;Parent=gene4014;Dbxref=ASAP:ABE-0012850,UniProtKB/Swiss-Prot:P29131,Genbank:NP_418368.1,EcoGene:EG11529,GeneID:948428;Name=NP_418368.1;gbkey=CDS;gene=ftsN;product=essential cell division protein;protein_id=NP_418368.1;transl_table=11 NC_000913.3 RefSeq gene 4123431 4124456 . - . ID=gene4015;Dbxref=EcoGene:EG10200,GeneID:948427;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;gene_synonym=ECK3926,JW3905;locus_tag=b3934 NC_000913.3 RefSeq CDS 4123431 4124456 . - 0 ID=cds3861;Parent=gene4015;Dbxref=ASAP:ABE-0012853,UniProtKB/Swiss-Prot:P0ACN7,Genbank:NP_418369.1,EcoGene:EG10200,GeneID:948427;Name=NP_418369.1;Note=regulator for deo operon%2C udp%2C cdd%2C tsx%2C nupC%2C and nupG;gbkey=CDS;gene=cytR;product=Anti-activator for CytR-CRP nucleoside utilization regulon;protein_id=NP_418369.1;transl_table=11 NC_000913.3 RefSeq gene 4124612 4126810 . - . ID=gene4016;Dbxref=EcoGene:EG10763,GeneID:948426;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;gene_synonym=ECK3927,JW3906,srgA;locus_tag=b3935 NC_000913.3 RefSeq CDS 4124612 4126810 . - 0 ID=cds3862;Parent=gene4016;Dbxref=ASAP:ABE-0012860,UniProtKB/Swiss-Prot:P17888,Genbank:NP_418370.1,EcoGene:EG10763,GeneID:948426;Name=NP_418370.1;Note=primosomal protein N'(%3D factor Y)(putative helicase);gbkey=CDS;gene=priA;product=Primosome factor n' (replication factor Y);protein_id=NP_418370.1;transl_table=11 NC_000913.3 RefSeq gene 4127013 4127225 . + . ID=gene4017;Dbxref=EcoGene:EG10889,GeneID:948425;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;gene_synonym=ECK3928,JW3907;locus_tag=b3936 NC_000913.3 RefSeq CDS 4127013 4127225 . + 0 ID=cds3863;Parent=gene4017;Dbxref=ASAP:ABE-0012867,UniProtKB/Swiss-Prot:P0A7M9,Genbank:NP_418371.1,EcoGene:EG10889,GeneID:948425;Name=NP_418371.1;gbkey=CDS;gene=rpmE;product=50S ribosomal subunit protein L31;protein_id=NP_418371.1;transl_table=11 NC_000913.3 RefSeq gene 4127286 4127894 . - . ID=gene4018;Dbxref=EcoGene:EG11882,GeneID:948436;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;gene_synonym=ECK3929,JW3908;locus_tag=b3937 NC_000913.3 RefSeq CDS 4127286 4127894 . - 0 ID=cds3864;Parent=gene4018;Dbxref=ASAP:ABE-0012869,UniProtKB/Swiss-Prot:P32167,Genbank:NP_418372.1,EcoGene:EG11882,GeneID:948436;Name=NP_418372.1;gbkey=CDS;gene=yiiX;product=putative lipid binding hydrolase%2C DUF830 family protein;protein_id=NP_418372.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4127952 4128048 . + . ID=id512;Note=RIP305 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4128078 4128395 . - . ID=gene4019;Dbxref=EcoGene:EG10588,GeneID:948435;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;gene_synonym=ECK3930,JW3909;locus_tag=b3938 NC_000913.3 RefSeq CDS 4128078 4128395 . - 0 ID=cds3865;Parent=gene4019;Dbxref=ASAP:ABE-0012874,UniProtKB/Swiss-Prot:P0A8U6,Genbank:NP_418373.1,EcoGene:EG10588,GeneID:948435;Name=NP_418373.1;Note=repressor of all met genes but metF;gbkey=CDS;gene=metJ;product=transcriptional repressor%2C S-adenosylmethionine-binding;protein_id=NP_418373.1;transl_table=11 NC_000913.3 RefSeq gene 4128672 4129832 . + . ID=gene4020;Dbxref=EcoGene:EG10582,GeneID:948434;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;gene_synonym=ECK3931,JW3910,met-1;locus_tag=b3939 NC_000913.3 RefSeq CDS 4128672 4129832 . + 0 ID=cds3866;Parent=gene4020;Dbxref=ASAP:ABE-0012887,UniProtKB/Swiss-Prot:P00935,Genbank:NP_418374.1,EcoGene:EG10582,GeneID:948434;Name=NP_418374.1;Note=cystathionine gamma-synthase;gbkey=CDS;gene=metB;product=cystathionine gamma-synthase%2C PLP-dependent;protein_id=NP_418374.1;transl_table=11 NC_000913.3 RefSeq gene 4129835 4132267 . + . ID=gene4021;Dbxref=EcoGene:EG10590,GeneID:948433;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=ECK3932,JW3911,metM;locus_tag=b3940 NC_000913.3 RefSeq CDS 4129835 4132267 . + 0 ID=cds3867;Parent=gene4021;Dbxref=ASAP:ABE-0012889,UniProtKB/Swiss-Prot:P00562,Genbank:NP_418375.1,EcoGene:EG10590,GeneID:948433;Name=NP_418375.1;Note=aspartokinase II and homoserine dehydrogenase II;gbkey=CDS;gene=metL;product=Bifunctional aspartokinase/homoserine dehydrogenase 2;protein_id=NP_418375.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4132347 4132380 . + . ID=id513;Note=REP306 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4132616 4133506 . + . ID=gene4022;Dbxref=EcoGene:EG10585,GeneID:948432;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;gene_synonym=ECK3933,JW3913;locus_tag=b3941 NC_000913.3 RefSeq CDS 4132616 4133506 . + 0 ID=cds3868;Parent=gene4022;Dbxref=ASAP:ABE-0012897,UniProtKB/Swiss-Prot:P0AEZ1,Genbank:NP_418376.1,EcoGene:EG10585,GeneID:948432;Name=NP_418376.1;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=NP_418376.1;transl_table=11 NC_000913.3 RefSeq gene 4133835 4136015 . + . ID=gene4023;Dbxref=EcoGene:EG10511,GeneID:948431;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;gene_synonym=ECK3934,JW3914;locus_tag=b3942 NC_000913.3 RefSeq CDS 4133835 4136015 . + 0 ID=cds3869;Parent=gene4023;Dbxref=ASAP:ABE-0012901,UniProtKB/Swiss-Prot:P13029,Genbank:NP_418377.1,EcoGene:EG10511,GeneID:948431;Name=NP_418377.1;Note=catalase%3B hydroperoxidase HPI(I);gbkey=CDS;gene=katG;product=catalase-peroxidase HPI%2C heme b-containing;protein_id=NP_418377.1;transl_table=11 NC_000913.3 RefSeq gene 4136108 4137013 . + . ID=gene4024;Dbxref=EcoGene:EG11902,GeneID:948445;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;gene_synonym=ECK3935,JW5557;locus_tag=b3943 NC_000913.3 RefSeq CDS 4136108 4137013 . + 0 ID=cds3870;Parent=gene4024;Dbxref=ASAP:ABE-0012906,UniProtKB/Swiss-Prot:P0ABT8,Genbank:NP_418378.4,EcoGene:EG11902,GeneID:948445;Name=NP_418378.4;gbkey=CDS;gene=yijE;product=EamA-like transporter family protein;protein_id=NP_418378.4;transl_table=11 NC_000913.3 RefSeq gene 4137040 4137657 . - . ID=gene4025;Dbxref=EcoGene:EG11903,GeneID:948441;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;gene_synonym=ECK3936,JW3916;locus_tag=b3944 NC_000913.3 RefSeq CDS 4137040 4137657 . - 0 ID=cds3871;Parent=gene4025;Dbxref=ASAP:ABE-0012908,UniProtKB/Swiss-Prot:P32668,Genbank:NP_418379.1,EcoGene:EG11903,GeneID:948441;Name=NP_418379.1;gbkey=CDS;gene=yijF;product=DUF1287 family protein;protein_id=NP_418379.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4137789 4137886 . + . ID=id514;Note=RIP307 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4137932 4139035 . - . ID=gene4026;Dbxref=EcoGene:EG11904,GeneID:948440;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;gene_synonym=ECK3937,JW5556;locus_tag=b3945 NC_000913.3 RefSeq CDS 4137932 4139035 . - 0 ID=cds3872;Parent=gene4026;Dbxref=ASAP:ABE-0012912,UniProtKB/Swiss-Prot:P0A9S5,Genbank:NP_418380.4,EcoGene:EG11904,GeneID:948440;Name=NP_418380.4;Note=glycerol dehydrogenase%2C (NAD);gbkey=CDS;gene=gldA;product=glycerol dehydrogenase%2C NAD+ dependent%3B 1%2C2-propanediol:NAD+ oxidoreductase;protein_id=NP_418380.4;transl_table=11 NC_000913.3 RefSeq gene 4139046 4139708 . - . ID=gene4027;Dbxref=EcoGene:EG11905,GeneID:948439;Name=fsaB;gbkey=Gene;gene=fsaB;gene_biotype=protein_coding;gene_synonym=ECK3938,JW3918,talC,yijG;locus_tag=b3946 NC_000913.3 RefSeq CDS 4139046 4139708 . - 0 ID=cds3873;Parent=gene4027;Dbxref=ASAP:ABE-0012915,UniProtKB/Swiss-Prot:P32669,Genbank:NP_418381.1,EcoGene:EG11905,GeneID:948439;Name=NP_418381.1;gbkey=CDS;gene=fsaB;product=fructose-6-phosphate aldolase 2;protein_id=NP_418381.1;transl_table=11 NC_000913.3 RefSeq gene 4139720 4142221 . - . ID=gene4028;Dbxref=EcoGene:EG11906,GeneID:948437;Name=frwA;gbkey=Gene;gene=frwA;gene_biotype=protein_coding;gene_synonym=ECK3939,JW5555,ptsA,yijH;locus_tag=b3947 NC_000913.3 RefSeq CDS 4139720 4142221 . - 0 ID=cds3874;Parent=gene4028;Dbxref=ASAP:ABE-0012920,UniProtKB/Swiss-Prot:P32670,Genbank:YP_026278.1,EcoGene:EG11906,GeneID:948437;Name=YP_026278.1;Note=PEP-protein phosphotransferase system enzyme I;gbkey=CDS;gene=frwA;product=putative PTS enzyme: Hpr%2C enzyme I and II components;protein_id=YP_026278.1;transl_table=11 NC_000913.3 RefSeq gene 4142530 4143609 . + . ID=gene4029;Dbxref=EcoGene:EG11908,GeneID:948448;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;gene_synonym=ECK3940,JW3921,yijJ;locus_tag=b3949 NC_000913.3 RefSeq CDS 4142530 4143609 . + 0 ID=cds3875;Parent=gene4029;Dbxref=ASAP:ABE-0012928,UniProtKB/Swiss-Prot:P32672,Genbank:NP_418384.1,EcoGene:EG11908,GeneID:948448;Name=NP_418384.1;Note=PTS system%2C fructose-like enzyme II component;gbkey=CDS;gene=frwC;product=putative enzyme IIC component of PTS;protein_id=NP_418384.1;transl_table=11 NC_000913.3 RefSeq gene 4143624 4143944 . + . ID=gene4030;Dbxref=EcoGene:EG11909,GeneID:948447;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;gene_synonym=ECK3941,JW3922,yijK;locus_tag=b3950 NC_000913.3 RefSeq CDS 4143624 4143944 . + 0 ID=cds3876;Parent=gene4030;Dbxref=ASAP:ABE-0012930,UniProtKB/Swiss-Prot:P69816,Genbank:NP_418385.1,EcoGene:EG11909,GeneID:948447;Name=NP_418385.1;Note=PTS system fructose-like IIB component 1;gbkey=CDS;gene=frwB;product=putative enzyme IIB component of PTS;protein_id=NP_418385.1;transl_table=11 NC_000913.3 RefSeq gene 4143995 4146292 . + . ID=gene4031;Dbxref=EcoGene:EG11910,GeneID:948454;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;gene_synonym=ECK3942,JW3923,yijL;locus_tag=b3951 NC_000913.3 RefSeq CDS 4143995 4146292 . + 0 ID=cds3877;Parent=gene4031;Dbxref=ASAP:ABE-0012934,UniProtKB/Swiss-Prot:P32674,Genbank:NP_418386.1,EcoGene:EG11910,GeneID:948454;Name=NP_418386.1;Note=formate acetyltransferase 2;gbkey=CDS;gene=pflD;product=putative glycine radical domain-containing pyruvate formate-lyase;protein_id=NP_418386.1;transl_table=11 NC_000913.3 RefSeq gene 4146258 4147136 . + . ID=gene4032;Dbxref=EcoGene:EG11911,GeneID:948453;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;gene_synonym=ECK3943,JW3924,yijM;locus_tag=b3952 NC_000913.3 RefSeq CDS 4146258 4147136 . + 0 ID=cds3878;Parent=gene4032;Dbxref=ASAP:ABE-0012937,UniProtKB/Swiss-Prot:P32675,Genbank:NP_418387.3,EcoGene:EG11911,GeneID:948453;Name=NP_418387.3;Note=probable pyruvate formate lyase activating enzyme 2;gbkey=CDS;gene=pflC;product=putative [formate-C-acetyltransferase 2]-activating enzyme%3B pyruvate formate-lyase 1-activating enzyme;protein_id=NP_418387.3;transl_table=11 NC_000913.3 RefSeq gene 4147138 4147479 . + . ID=gene4033;Dbxref=EcoGene:EG11912,GeneID:948452;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;gene_synonym=ECK3944,JW3925,yijN;locus_tag=b3953 NC_000913.3 RefSeq CDS 4147138 4147479 . + 0 ID=cds3879;Parent=gene4033;Dbxref=ASAP:ABE-0012941,UniProtKB/Swiss-Prot:P32676,Genbank:NP_418388.1,EcoGene:EG11912,GeneID:948452;Name=NP_418388.1;Note=PTS system fructose-like IIB component 2;gbkey=CDS;gene=frwD;product=putative enzyme IIB component of PTS;protein_id=NP_418388.1;transl_table=11 NC_000913.3 RefSeq gene 4147466 4148317 . - . ID=gene4034;Dbxref=EcoGene:EG11913,GeneID:948451;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;gene_synonym=ECK3945,JW3926;locus_tag=b3954 NC_000913.3 RefSeq CDS 4147466 4148317 . - 0 ID=cds3880;Parent=gene4034;Dbxref=ASAP:ABE-0012943,UniProtKB/Swiss-Prot:P32677,Genbank:NP_418389.1,EcoGene:EG11913,GeneID:948451;Name=NP_418389.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=yijO;product=AraC family putative transcriptional activator;protein_id=NP_418389.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4148430 4148511 . + . ID=id515;Note=REP308 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4148532 4150265 . - . ID=gene4035;Dbxref=EcoGene:EG11914,GeneID:948458;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;gene_synonym=cptA,ECK3946,JW3927,yijP;locus_tag=b3955 NC_000913.3 RefSeq CDS 4148532 4150265 . - 0 ID=cds3881;Parent=gene4035;Dbxref=ASAP:ABE-0012947,UniProtKB/Swiss-Prot:P0CB39,Genbank:NP_418390.1,EcoGene:EG11914,GeneID:948458;Name=NP_418390.1;gbkey=CDS;gene=eptC;product=LPS heptose I phosphoethanolamine transferase;protein_id=NP_418390.1;transl_table=11 NC_000913.3 RefSeq gene 4150447 4153098 . - . ID=gene4036;Dbxref=EcoGene:EG10756,GeneID:948457;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;gene_synonym=asp,ECK3947,glu,JW3928;locus_tag=b3956 NC_000913.3 RefSeq CDS 4150447 4153098 . - 0 ID=cds3882;Parent=gene4036;Dbxref=ASAP:ABE-0012950,UniProtKB/Swiss-Prot:P00864,Genbank:NP_418391.1,EcoGene:EG10756,GeneID:948457;Name=NP_418391.1;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=NP_418391.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4153347 4153692 . + . ID=id516;Note=REP309 (repetitive extragenic palindromic) element%3B contains 6 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4153696 4154847 . - . ID=gene4037;Dbxref=EcoGene:EG11286,GeneID:948456;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;gene_synonym=Arg4,argA,ECK3948,JW3929;locus_tag=b3957 NC_000913.3 RefSeq CDS 4153696 4154847 . - 0 ID=cds3883;Parent=gene4037;Dbxref=ASAP:ABE-0012955,UniProtKB/Swiss-Prot:P23908,Genbank:NP_418392.1,EcoGene:EG11286,GeneID:948456;Name=NP_418392.1;gbkey=CDS;gene=argE;product=acetylornithine deacetylase;protein_id=NP_418392.1;transl_table=11 NC_000913.3 RefSeq gene 4155001 4156005 . + . ID=gene4038;Dbxref=EcoGene:EG10065,GeneID:948455;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;gene_synonym=Arg2,argH,ECK3949,JW3930;locus_tag=b3958 NC_000913.3 RefSeq CDS 4155001 4156005 . + 0 ID=cds3884;Parent=gene4038;Dbxref=ASAP:ABE-0012964,UniProtKB/Swiss-Prot:P11446,Genbank:NP_418393.1,EcoGene:EG10065,GeneID:948455;Name=NP_418393.1;Note=N-acetyl-gamma-glutamylphosphate reductase;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamylphosphate reductase%2C NAD(P)-binding;protein_id=NP_418393.1;transl_table=11 NC_000913.3 RefSeq gene 4156013 4156789 . + . ID=gene4039;Dbxref=EcoGene:EG10064,GeneID:948464;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;gene_synonym=ECK3950,JW5553;locus_tag=b3959 NC_000913.3 RefSeq CDS 4156013 4156789 . + 0 ID=cds3885;Parent=gene4039;Dbxref=ASAP:ABE-0012967,UniProtKB/Swiss-Prot:P0A6C8,Genbank:NP_418394.3,EcoGene:EG10064,GeneID:948464;Name=NP_418394.3;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=NP_418394.3;transl_table=11 NC_000913.3 RefSeq gene 4156850 4158223 . + . ID=gene4040;Dbxref=EcoGene:EG11223,GeneID:948463;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;gene_synonym=ECK3951,JW3932;locus_tag=b3960 NC_000913.3 RefSeq CDS 4156850 4158223 . + 0 ID=cds3886;Parent=gene4040;Dbxref=ASAP:ABE-0012969,UniProtKB/Swiss-Prot:P11447,Genbank:NP_418395.1,EcoGene:EG11223,GeneID:948463;Name=NP_418395.1;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=NP_418395.1;transl_table=11 NC_000913.3 RefSeq gene 4158285 4158394 . - . ID=gene4041;Dbxref=EcoGene:EG31116,GeneID:2847701;Name=oxyS;gbkey=Gene;gene=oxyS;gene_biotype=antisense_RNA;gene_synonym=ECK3952,JWR0098;locus_tag=b4458 NC_000913.3 RefSeq ncRNA 4158285 4158394 . - . ID=rna153;Parent=gene4041;Dbxref=ASAP:ABE-0047276,EcoGene:EG31116,GeneID:2847701;Note=global regulatory RNA OxyS;gbkey=ncRNA;gene=oxyS;ncrna_class=antisense_RNA;product=sRNA antisense regulator activates genes that detoxify oxidative damage%2C Hfq-dependent NC_000913.3 RefSeq exon 4158285 4158394 . - . ID=id517;Parent=rna153;Dbxref=ASAP:ABE-0047276,EcoGene:EG31116,GeneID:2847701;Note=global regulatory RNA OxyS;gbkey=ncRNA;gene=oxyS;ncrna_class=antisense_RNA;product=sRNA antisense regulator activates genes that detoxify oxidative damage%2C Hfq-dependent NC_000913.3 RefSeq gene 4158490 4159407 . + . ID=gene4042;Dbxref=EcoGene:EG10681,GeneID:948462;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;gene_synonym=ECK3953,JW3933,momR,mor;locus_tag=b3961 NC_000913.3 RefSeq CDS 4158490 4159407 . + 0 ID=cds3887;Parent=gene4042;Dbxref=ASAP:ABE-0012973,UniProtKB/Swiss-Prot:P0ACQ4,Genbank:NP_418396.1,EcoGene:EG10681,GeneID:948462;Name=NP_418396.1;Note=activator%2C hydrogen peroxide-inducible genes;gbkey=CDS;gene=oxyR;product=oxidative and nitrosative stress transcriptional regulator;protein_id=NP_418396.1;transl_table=11 NC_000913.3 RefSeq gene 4159390 4160790 . - . ID=gene4043;Dbxref=EcoGene:EG11428,GeneID:948461;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;gene_synonym=ECK3954,JW5551,sth,udhA;locus_tag=b3962 NC_000913.3 RefSeq CDS 4159390 4160790 . - 0 ID=cds3888;Parent=gene4043;Dbxref=ASAP:ABE-0012975,UniProtKB/Swiss-Prot:P27306,Genbank:NP_418397.2,EcoGene:EG11428,GeneID:948461;Name=NP_418397.2;gbkey=CDS;gene=sthA;product=pyridine nucleotide transhydrogenase%2C soluble;protein_id=NP_418397.2;transl_table=11 NC_000913.3 RefSeq gene 4161124 4161771 . + . ID=gene4044;Dbxref=EcoGene:EG11394,GeneID:948460;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;gene_synonym=ECK3955,JW3935,yijC;locus_tag=b3963 NC_000913.3 RefSeq CDS 4161124 4161771 . + 0 ID=cds3889;Parent=gene4044;Dbxref=ASAP:ABE-0012979,UniProtKB/Swiss-Prot:P0ACU5,Genbank:NP_418398.2,EcoGene:EG11394,GeneID:948460;Name=NP_418398.2;gbkey=CDS;gene=fabR;product=transcriptional repressor of fabA and fabB;protein_id=NP_418398.2;transl_table=11 NC_000913.3 RefSeq gene 4161771 4162130 . + . ID=gene4045;Dbxref=EcoGene:EG11395,GeneID:948459;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;gene_synonym=ECK3956,JW3936;locus_tag=b3964 NC_000913.3 RefSeq CDS 4161771 4162130 . + 0 ID=cds3890;Parent=gene4045;Dbxref=ASAP:ABE-0012981,UniProtKB/Swiss-Prot:P0AF40,Genbank:NP_418399.1,EcoGene:EG11395,GeneID:948459;Name=NP_418399.1;gbkey=CDS;gene=yijD;product=DUF1422 family inner membrane protein;protein_id=NP_418399.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4162141 4162162 . + . ID=id518;Note=REP310 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4162170 4163270 . - . ID=gene4046;Dbxref=EcoGene:EG11022,GeneID:947143;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;gene_synonym=ECK3957,JW3937,rumT;locus_tag=b3965 NC_000913.3 RefSeq CDS 4162170 4163270 . - 0 ID=cds3891;Parent=gene4046;Dbxref=ASAP:ABE-0012983,UniProtKB/Swiss-Prot:P23003,Genbank:NP_418400.1,EcoGene:EG11022,GeneID:947143;Name=NP_418400.1;gbkey=CDS;gene=trmA;product=tRNA m(5)U54 methyltransferase%2C SAM-dependent%3B tmRNA m(5)U341 methyltransferase;protein_id=NP_418400.1;transl_table=11 NC_000913.3 RefSeq gene 4163639 4165483 . + . ID=gene4047;Dbxref=EcoGene:EG10126,GeneID:948468;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;gene_synonym=bfe,cer,dcrC,ECK3958,JW3938;locus_tag=b3966 NC_000913.3 RefSeq CDS 4163639 4165483 . + 0 ID=cds3892;Parent=gene4047;Dbxref=ASAP:ABE-0012987,UniProtKB/Swiss-Prot:P06129,Genbank:NP_418401.1,EcoGene:EG10126,GeneID:948468;Name=NP_418401.1;Note=outer membrane receptor for transport of vitamin B12%2C E colicins%2C and bacteriophage BF23;gbkey=CDS;gene=btuB;product=vitamin B12/cobalamin outer membrane transporter;protein_id=NP_418401.1;transl_table=11 NC_000913.3 RefSeq gene 4165428 4166285 . + . ID=gene4048;Dbxref=EcoGene:EG11204,GeneID:948467;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;gene_synonym=dga,ECK3959,glr,JW5550,yijA;locus_tag=b3967 NC_000913.3 RefSeq CDS 4165428 4166285 . + 0 ID=cds3893;Parent=gene4048;Dbxref=ASAP:ABE-0012989,UniProtKB/Swiss-Prot:P22634,Genbank:NP_418402.2,EcoGene:EG11204,GeneID:948467;Name=NP_418402.2;Note=glutamate racemase%2C required for biosynthesis of D-glutamate and peptidoglycan;gbkey=CDS;gene=murI;product=glutamate racemase;protein_id=NP_418402.2;transl_table=11 NC_000913.3 RefSeq gene 4166659 4168200 . + . ID=gene4049;Dbxref=EcoGene:EG30085,GeneID:948466;Name=rrsB;gbkey=Gene;gene=rrsB;gene_biotype=rRNA;gene_synonym=ECK3960,JWR0099;locus_tag=b3968 NC_000913.3 RefSeq rRNA 4166659 4168200 . + . ID=rna154;Parent=gene4049;Dbxref=ASAP:ABE-0012991,EcoGene:EG30085,GeneID:948466;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA of rrnB operon NC_000913.3 RefSeq exon 4166659 4168200 . + . ID=id519;Parent=rna154;Dbxref=ASAP:ABE-0012991,EcoGene:EG30085,GeneID:948466;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA of rrnB operon NC_000913.3 RefSeq gene 4168372 4168447 . + . ID=gene4050;Dbxref=EcoGene:EG30032,GeneID:948465;Name=gltT;gbkey=Gene;gene=gltT;gene_biotype=tRNA;gene_synonym=ECK3961,JWR0100,tgtB;locus_tag=b3969 NC_000913.3 RefSeq tRNA 4168372 4168447 . + . ID=rna155;Parent=gene4050;Dbxref=ASAP:ABE-0012993,EcoGene:EG30032,GeneID:948465;Note=anticodon: UUC;gbkey=tRNA;gene=gltT;product=tRNA-Glu NC_000913.3 RefSeq exon 4168372 4168447 . + . ID=id520;Parent=rna155;Dbxref=ASAP:ABE-0012993,EcoGene:EG30032,GeneID:948465;Note=anticodon: UUC;gbkey=tRNA;gene=gltT;product=tRNA-Glu NC_000913.3 RefSeq gene 4168641 4171544 . + . ID=gene4051;Dbxref=EcoGene:EG30078,GeneID:948473;Name=rrlB;gbkey=Gene;gene=rrlB;gene_biotype=rRNA;gene_synonym=ECK3962,JWR0101;locus_tag=b3970 NC_000913.3 RefSeq rRNA 4168641 4171544 . + . ID=rna156;Parent=gene4051;Dbxref=ASAP:ABE-0012995,EcoGene:EG30078,GeneID:948473;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA of rrnB operon NC_000913.3 RefSeq exon 4168641 4171544 . + . ID=id521;Parent=rna156;Dbxref=ASAP:ABE-0012995,EcoGene:EG30078,GeneID:948473;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA of rrnB operon NC_000913.3 RefSeq gene 4171637 4171756 . + . ID=gene4052;Dbxref=EcoGene:EG30071,GeneID:948471;Name=rrfB;gbkey=Gene;gene=rrfB;gene_biotype=rRNA;gene_synonym=ECK3963,JWR0102;locus_tag=b3971 NC_000913.3 RefSeq rRNA 4171637 4171756 . + . ID=rna157;Parent=gene4052;Dbxref=ASAP:ABE-0012997,EcoGene:EG30071,GeneID:948471;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA of rrnB operon NC_000913.3 RefSeq exon 4171637 4171756 . + . ID=id522;Parent=rna157;Dbxref=ASAP:ABE-0012997,EcoGene:EG30071,GeneID:948471;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA of rrnB operon NC_000913.3 RefSeq gene 4172057 4173085 . + . ID=gene4053;Dbxref=EcoGene:EG11205,GeneID:948470;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;gene_synonym=ECK3964,JW3940,yijB;locus_tag=b3972 NC_000913.3 RefSeq CDS 4172057 4173085 . + 0 ID=cds3894;Parent=gene4053;Dbxref=ASAP:ABE-0012999,UniProtKB/Swiss-Prot:P08373,Genbank:NP_418403.1,EcoGene:EG11205,GeneID:948470;Name=NP_418403.1;Note=UDP-N-acetylenolpyruvoylglucosamine reductase;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase%2C FAD-binding;protein_id=NP_418403.1;transl_table=11 NC_000913.3 RefSeq gene 4173082 4174047 . + . ID=gene4054;Dbxref=EcoGene:EG10123,GeneID:948469;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;gene_synonym=bioR,dhbB,ECK3965,JW3941;locus_tag=b3973 NC_000913.3 RefSeq CDS 4173082 4174047 . + 0 ID=cds3895;Parent=gene4054;Dbxref=ASAP:ABE-0013001,UniProtKB/Swiss-Prot:P06709,Genbank:NP_418404.1,EcoGene:EG10123,GeneID:948469;Name=NP_418404.1;Note=biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor;gbkey=CDS;gene=birA;product=bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor%2C bio-5'-AMP-binding;protein_id=NP_418404.1;transl_table=11 NC_000913.3 RefSeq gene 4174076 4175026 . - . ID=gene4055;Dbxref=EcoGene:EG10922,GeneID:948479;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;gene_synonym=ECK3966,JW3942,panK,rts,ts-9;locus_tag=b3974 NC_000913.3 RefSeq CDS 4174076 4175026 . - 0 ID=cds3896;Parent=gene4055;Dbxref=ASAP:ABE-0013003,UniProtKB/Swiss-Prot:P0A6I3,Genbank:NP_418405.1,EcoGene:EG10922,GeneID:948479;Name=NP_418405.1;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=NP_418405.1;transl_table=11 NC_000913.3 RefSeq gene 4175388 4175463 . + . ID=gene4056;Dbxref=EcoGene:EG30102,GeneID:948476;Name=thrU;gbkey=Gene;gene=thrU;gene_biotype=tRNA;gene_synonym=ECK3967,JWR0103;locus_tag=b3976 NC_000913.3 RefSeq tRNA 4175388 4175463 . + . ID=rna158;Parent=gene4056;Dbxref=ASAP:ABE-0013011,EcoGene:EG30102,GeneID:948476;Note=anticodon: UGU;gbkey=tRNA;gene=thrU;product=tRNA-Thr NC_000913.3 RefSeq exon 4175388 4175463 . + . ID=id523;Parent=rna158;Dbxref=ASAP:ABE-0013011,EcoGene:EG30102,GeneID:948476;Note=anticodon: UGU;gbkey=tRNA;gene=thrU;product=tRNA-Thr NC_000913.3 RefSeq gene 4175472 4175556 . + . ID=gene4057;Dbxref=EcoGene:EG30107,GeneID:948474;Name=tyrU;gbkey=Gene;gene=tyrU;gene_biotype=tRNA;gene_synonym=ECK3968,JWR0213,supM,supZ;locus_tag=b3977 NC_000913.3 RefSeq tRNA 4175472 4175556 . + . ID=rna159;Parent=gene4057;Dbxref=ASAP:ABE-0013013,EcoGene:EG30107,GeneID:948474;Note=anticodon: GUA;gbkey=tRNA;gene=tyrU;product=tRNA-Tyr NC_000913.3 RefSeq exon 4175472 4175556 . + . ID=id524;Parent=rna159;Dbxref=ASAP:ABE-0013013,EcoGene:EG30107,GeneID:948474;Note=anticodon: GUA;gbkey=tRNA;gene=tyrU;product=tRNA-Tyr NC_000913.3 RefSeq gene 4175673 4175747 . + . ID=gene4058;Dbxref=EcoGene:EG30036,GeneID:948481;Name=glyT;gbkey=Gene;gene=glyT;gene_biotype=tRNA;gene_synonym=ECK3969,JWR0105,sumA,sup15B,supA36;locus_tag=b3978 NC_000913.3 RefSeq tRNA 4175673 4175747 . + . ID=rna160;Parent=gene4058;Dbxref=ASAP:ABE-0013016,EcoGene:EG30036,GeneID:948481;Note=anticodon: UCC;gbkey=tRNA;gene=glyT;product=tRNA-Gly NC_000913.3 RefSeq exon 4175673 4175747 . + . ID=id525;Parent=rna160;Dbxref=ASAP:ABE-0013016,EcoGene:EG30036,GeneID:948481;Note=anticodon: UCC;gbkey=tRNA;gene=glyT;product=tRNA-Gly NC_000913.3 RefSeq gene 4175754 4175829 . + . ID=gene4059;Dbxref=EcoGene:EG30101,GeneID:948480;Name=thrT;gbkey=Gene;gene=thrT;gene_biotype=tRNA;gene_synonym=ECK3970,JWR0106;locus_tag=b3979 NC_000913.3 RefSeq tRNA 4175754 4175829 . + . ID=rna161;Parent=gene4059;Dbxref=ASAP:ABE-0013018,EcoGene:EG30101,GeneID:948480;Note=anticodon: GGU;gbkey=tRNA;gene=thrT;product=tRNA-Thr NC_000913.3 RefSeq exon 4175754 4175829 . + . ID=id526;Parent=rna161;Dbxref=ASAP:ABE-0013018,EcoGene:EG30101,GeneID:948480;Note=anticodon: GGU;gbkey=tRNA;gene=thrT;product=tRNA-Thr NC_000913.3 RefSeq gene 4175944 4177128 . + . ID=gene4060;Dbxref=EcoGene:EG11037,GeneID:948482;Name=tufB;gbkey=Gene;gene=tufB;gene_biotype=protein_coding;gene_synonym=ECK3971,JW3943,kirT,pulT;locus_tag=b3980 NC_000913.3 RefSeq CDS 4175944 4177128 . + 0 ID=cds3897;Parent=gene4060;Dbxref=ASAP:ABE-0013020,UniProtKB/Swiss-Prot:P0CE48,Genbank:NP_418407.1,EcoGene:EG11037,GeneID:948482;Name=NP_418407.1;gbkey=CDS;gene=tufB;product=translation elongation factor EF-Tu 2;protein_id=NP_418407.1;transl_table=11 NC_000913.3 RefSeq gene 4177358 4177741 . + . ID=gene4061;Dbxref=EcoGene:EG10939,GeneID:948486;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;gene_synonym=ECK3972,JW3944,mbrC,prlG;locus_tag=b3981 NC_000913.3 RefSeq CDS 4177358 4177741 . + 0 ID=cds3898;Parent=gene4061;Dbxref=ASAP:ABE-0013023,UniProtKB/Swiss-Prot:P0AG96,Genbank:NP_418408.1,EcoGene:EG10939,GeneID:948486;Name=NP_418408.1;Note=preprotein translocase;gbkey=CDS;gene=secE;product=preprotein translocase membrane subunit;protein_id=NP_418408.1;transl_table=11 NC_000913.3 RefSeq gene 4177743 4178288 . + . ID=gene4062;Dbxref=EcoGene:EG10667,GeneID:948485;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;gene_synonym=ECK3973,JW3945;locus_tag=b3982 NC_000913.3 RefSeq CDS 4177743 4178288 . + 0 ID=cds3899;Parent=gene4062;Dbxref=ASAP:ABE-0013026,UniProtKB/Swiss-Prot:P0AFG0,Genbank:NP_418409.1,EcoGene:EG10667,GeneID:948485;Name=NP_418409.1;Note=component in transcription antitermination;gbkey=CDS;gene=nusG;product=transcription termination factor;protein_id=NP_418409.1;transl_table=11 NC_000913.3 RefSeq gene 4178447 4178875 . + . ID=gene4063;Dbxref=EcoGene:EG10872,GeneID:948484;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;gene_synonym=ECK3974,JW3946,relC;locus_tag=b3983 NC_000913.3 RefSeq CDS 4178447 4178875 . + 0 ID=cds3900;Parent=gene4063;Dbxref=ASAP:ABE-0013029,UniProtKB/Swiss-Prot:P0A7J7,Genbank:NP_418410.1,EcoGene:EG10872,GeneID:948484;Name=NP_418410.1;gbkey=CDS;gene=rplK;product=50S ribosomal subunit protein L11;protein_id=NP_418410.1;transl_table=11 NC_000913.3 RefSeq gene 4178879 4179583 . + . ID=gene4064;Dbxref=EcoGene:EG10864,GeneID:948483;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;gene_synonym=ECK3975,JW3947,rpy;locus_tag=b3984 NC_000913.3 RefSeq CDS 4178879 4179583 . + 0 ID=cds3901;Parent=gene4064;Dbxref=ASAP:ABE-0013031,UniProtKB/Swiss-Prot:P0A7L0,Genbank:NP_418411.1,EcoGene:EG10864,GeneID:948483;Name=NP_418411.1;Note=50S ribosomal subunit protein L1%2C regulates synthesis of L1 and L11;gbkey=CDS;gene=rplA;product=50S ribosomal subunit protein L1;protein_id=NP_418411.1;transl_table=11 NC_000913.3 RefSeq gene 4179996 4180493 . + . ID=gene4065;Dbxref=EcoGene:EG10871,GeneID:948490;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;gene_synonym=ECK3976,JW3948;locus_tag=b3985 NC_000913.3 RefSeq CDS 4179996 4180493 . + 0 ID=cds3902;Parent=gene4065;Dbxref=ASAP:ABE-0013035,UniProtKB/Swiss-Prot:P0A7J3,Genbank:NP_418412.1,EcoGene:EG10871,GeneID:948490;Name=NP_418412.1;gbkey=CDS;gene=rplJ;product=50S ribosomal subunit protein L10;protein_id=NP_418412.1;transl_table=11 NC_000913.3 RefSeq gene 4180560 4180925 . + . ID=gene4066;Dbxref=EcoGene:EG10873,GeneID:948489;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;gene_synonym=ECK3977,JW3949;locus_tag=b3986 NC_000913.3 RefSeq CDS 4180560 4180925 . + 0 ID=cds3903;Parent=gene4066;Dbxref=ASAP:ABE-0013038,UniProtKB/Swiss-Prot:P0A7K2,Genbank:NP_418413.1,EcoGene:EG10873,GeneID:948489;Name=NP_418413.1;gbkey=CDS;gene=rplL;product=50S ribosomal subunit protein L7/L12;protein_id=NP_418413.1;transl_table=11 NC_000913.3 RefSeq gene 4181245 4185273 . + . ID=gene4067;Dbxref=EcoGene:EG10894,GeneID:948488;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;gene_synonym=ECK3978,ftsR,groN,JW3950,mbrD?,nitB,rif,ron,sdgB,stl,stv,tabD,tabG;locus_tag=b3987 NC_000913.3 RefSeq CDS 4181245 4185273 . + 0 ID=cds3904;Parent=gene4067;Dbxref=ASAP:ABE-0013041,UniProtKB/Swiss-Prot:P0A8V2,Genbank:NP_418414.1,EcoGene:EG10894,GeneID:948488;Name=NP_418414.1;gbkey=CDS;gene=rpoB;product=RNA polymerase%2C beta subunit;protein_id=NP_418414.1;transl_table=11 NC_000913.3 RefSeq gene 4185350 4189573 . + . ID=gene4068;Dbxref=EcoGene:EG10895,GeneID:948487;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;gene_synonym=ECK3979,JW3951,tabB;locus_tag=b3988 NC_000913.3 RefSeq CDS 4185350 4189573 . + 0 ID=cds3905;Parent=gene4068;Dbxref=ASAP:ABE-0013043,UniProtKB/Swiss-Prot:P0A8T7,Genbank:NP_418415.1,EcoGene:EG10895,GeneID:948487;Name=NP_418415.1;gbkey=CDS;gene=rpoC;product=RNA polymerase%2C beta prime subunit;protein_id=NP_418415.1;transl_table=11 NC_000913.3 RefSeq gene 4189786 4190325 . + . ID=gene4069;Dbxref=EcoGene:EG11429,GeneID:948495;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;gene_synonym=ECK3980,htrC,JW3952;locus_tag=b3989 NC_000913.3 RefSeq CDS 4189786 4190325 . + 0 ID=cds3906;Parent=gene4069;Dbxref=ASAP:ABE-0013046,UniProtKB/Swiss-Prot:P27375,Genbank:NP_418416.1,EcoGene:EG11429,GeneID:948495;Name=NP_418416.1;Note=heat shock protein htrC;gbkey=CDS;gene=yjaZ;product=stationary phase growth adaptation protein;protein_id=NP_418416.1;transl_table=11 NC_000913.3 RefSeq gene 4190327 4190487 . - . ID=gene4070;Dbxref=EcoGene:EG31182,GeneID:7751646;Name=sroH;gbkey=Gene;gene=sroH;gene_biotype=ncRNA;gene_synonym=ECK4505,IS206;locus_tag=b4691 NC_000913.3 RefSeq ncRNA 4190327 4190487 . - . ID=rna162;Parent=gene4070;Dbxref=EcoGene:EG31182,GeneID:7751646;gbkey=ncRNA;gene=sroH;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 4190327 4190487 . - . ID=id527;Parent=rna162;Dbxref=EcoGene:EG31182,GeneID:7751646;gbkey=ncRNA;gene=sroH;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 4190735 4191868 . - . ID=gene4071;Dbxref=EcoGene:EG11590,GeneID:948494;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;gene_synonym=ECK3981,JW3953,thiB;locus_tag=b3990 NC_000913.3 RefSeq CDS 4190735 4191868 . - 0 ID=cds3907;Parent=gene4071;Dbxref=ASAP:ABE-0013048,UniProtKB/Swiss-Prot:P30140,Genbank:NP_418417.1,EcoGene:EG11590,GeneID:948494;Name=NP_418417.1;gbkey=CDS;gene=thiH;product=tyrosine lyase%2C involved in thiamine-thiazole moiety synthesis;protein_id=NP_418417.1;transl_table=11 NC_000913.3 RefSeq gene 4191865 4192635 . - . ID=gene4072;Dbxref=EcoGene:EG11589,GeneID:948493;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;gene_synonym=ECK3982,JW5549,thiB;locus_tag=b3991 NC_000913.3 RefSeq CDS 4191865 4192635 . - 0 ID=cds3908;Parent=gene4072;Dbxref=ASAP:ABE-0013050,UniProtKB/Swiss-Prot:P30139,Genbank:NP_418418.2,EcoGene:EG11589,GeneID:948493;Name=NP_418418.2;Note=thiamin (thiazole moiety) biosynthesis protein;gbkey=CDS;gene=thiG;product=thiamine biosynthesis ThiGH complex subunit;protein_id=NP_418418.2;transl_table=11 NC_000913.3 RefSeq gene 4192637 4192837 . - . ID=gene4073;Dbxref=EcoGene:EG14363,GeneID:2847702;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;gene_synonym=ECK3983,JW3955;locus_tag=b4407 NC_000913.3 RefSeq CDS 4192637 4192837 . - 0 ID=cds3909;Parent=gene4073;Dbxref=ASAP:ABE-0023907,UniProtKB/Swiss-Prot:O32583,Genbank:YP_026279.1,EcoGene:EG14363,GeneID:2847702;Name=YP_026279.1;Note=sulfur carrier protein;gbkey=CDS;gene=thiS;product=immediate sulfur donor in thiazole formation;protein_id=YP_026279.1;transl_table=11 NC_000913.3 RefSeq gene 4192821 4193576 . - . ID=gene4074;Dbxref=EcoGene:EG11587,GeneID:948500;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;gene_synonym=ECK3984,JW3956,thiA;locus_tag=b3992 NC_000913.3 RefSeq CDS 4192821 4193576 . - 0 ID=cds3910;Parent=gene4074;Dbxref=ASAP:ABE-0013053,UniProtKB/Swiss-Prot:P30138,Genbank:NP_418420.4,EcoGene:EG11587,GeneID:948500;Name=NP_418420.4;Note=adenylyltransferase;gbkey=CDS;gene=thiF;product=adenylyltransferase%2C modifies ThiS C-terminus;protein_id=NP_418420.4;transl_table=11 NC_000913.3 RefSeq gene 4193569 4194204 . - . ID=gene4075;Dbxref=EcoGene:EG11586,GeneID:948491;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;gene_synonym=ECK3985,JW3957,thiA;locus_tag=b3993 NC_000913.3 RefSeq CDS 4193569 4194204 . - 0 ID=cds3911;Parent=gene4075;Dbxref=ASAP:ABE-0013055,UniProtKB/Swiss-Prot:P30137,Genbank:NP_418421.1,EcoGene:EG11586,GeneID:948491;Name=NP_418421.1;Note=thiamin-phosphate synthase (thiamine-phosphate pyrophosphorylase);gbkey=CDS;gene=thiE;product=thiamine phosphate synthase (thiamine phosphate pyrophosphorylase);protein_id=NP_418421.1;transl_table=11 NC_000913.3 RefSeq gene 4194204 4196099 . - . ID=gene4076;Dbxref=EcoGene:EG11585,GeneID:948492;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;gene_synonym=ECK3986,JW3958;locus_tag=b3994 NC_000913.3 RefSeq CDS 4194204 4196099 . - 0 ID=cds3912;Parent=gene4076;Dbxref=ASAP:ABE-0013057,UniProtKB/Swiss-Prot:P30136,Genbank:NP_418422.1,EcoGene:EG11585,GeneID:948492;Name=NP_418422.1;gbkey=CDS;gene=thiC;product=phosphomethylpyrimidine synthase;protein_id=NP_418422.1;transl_table=11 NC_000913.3 RefSeq gene 4196332 4196808 . - . ID=gene4077;Dbxref=EcoGene:EG11738,GeneID:948496;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;gene_synonym=ECK3987,JW3959,yjaE;locus_tag=b3995 NC_000913.3 RefSeq CDS 4196332 4196808 . - 0 ID=cds3913;Parent=gene4077;Dbxref=ASAP:ABE-0013059,UniProtKB/Swiss-Prot:P0AFX4,Genbank:NP_418423.1,EcoGene:EG11738,GeneID:948496;Name=NP_418423.1;gbkey=CDS;gene=rsd;product=stationary phase protein%2C binds sigma 70 RNA polymerase subunit;protein_id=NP_418423.1;transl_table=11 NC_000913.3 RefSeq gene 4196903 4197676 . + . ID=gene4078;Dbxref=EcoGene:EG11702,GeneID:948498;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;gene_synonym=ECK3988,JW5548,yjaD;locus_tag=b3996 NC_000913.3 RefSeq CDS 4196903 4197676 . + 0 ID=cds3914;Parent=gene4078;Dbxref=ASAP:ABE-0013063,UniProtKB/Swiss-Prot:P32664,Genbank:YP_026280.1,EcoGene:EG11702,GeneID:948498;Name=YP_026280.1;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=YP_026280.1;transl_table=11 NC_000913.3 RefSeq gene 4197716 4198780 . + . ID=gene4079;Dbxref=EcoGene:EG11543,GeneID:948497;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;gene_synonym=ECK3989,hemC,JW3961;locus_tag=b3997 NC_000913.3 RefSeq CDS 4197716 4198780 . + 0 ID=cds3915;Parent=gene4079;Dbxref=ASAP:ABE-0013066,UniProtKB/Swiss-Prot:P29680,Genbank:NP_418425.1,EcoGene:EG11543,GeneID:948497;Name=NP_418425.1;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=NP_418425.1;transl_table=11 NC_000913.3 RefSeq gene 4198790 4199461 . + . ID=gene4080;Dbxref=EcoGene:EG11915,GeneID:948502;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;gene_synonym=ECK3990,JW5547,yjaF;locus_tag=b3998 NC_000913.3 RefSeq CDS 4198790 4199461 . + 0 ID=cds3916;Parent=gene4080;Dbxref=ASAP:ABE-0013068,UniProtKB/Swiss-Prot:P68739,Genbank:NP_418426.2,EcoGene:EG11915,GeneID:948502;Name=NP_418426.2;Note=endonuclease V (deoxyinosine 3'endoduclease);gbkey=CDS;gene=nfi;product=endonuclease V%3B deoxyinosine 3' endonuclease;protein_id=NP_418426.2;transl_table=11 NC_000913.3 RefSeq gene 4199504 4200094 . + . ID=gene4081;Dbxref=EcoGene:EG11916,GeneID:948501;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;gene_synonym=ECK3991,JW3963;locus_tag=b3999 NC_000913.3 RefSeq CDS 4199504 4200094 . + 0 ID=cds3917;Parent=gene4081;Dbxref=ASAP:ABE-0013070,UniProtKB/Swiss-Prot:P32680,Genbank:NP_418427.1,EcoGene:EG11916,GeneID:948501;Name=NP_418427.1;gbkey=CDS;gene=yjaG;product=DUF416 domain protein;protein_id=NP_418427.1;transl_table=11 NC_000913.3 RefSeq gene 4200281 4200553 . + . ID=gene4082;Dbxref=EcoGene:EG10466,GeneID:948499;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;gene_synonym=ECK3992,JW3964;locus_tag=b4000 NC_000913.3 RefSeq CDS 4200281 4200553 . + 0 ID=cds3918;Parent=gene4082;Dbxref=ASAP:ABE-0013077,UniProtKB/Swiss-Prot:P0ACF0,Genbank:NP_418428.1,EcoGene:EG10466,GeneID:948499;Name=NP_418428.1;Note=DNA-binding protein HU-alpha (HU-2);gbkey=CDS;gene=hupA;product=HU%2C DNA-binding transcriptional regulator%2C alpha subunit;protein_id=NP_418428.1;transl_table=11 NC_000913.3 RefSeq gene 4200566 4201261 . + . ID=gene4083;Dbxref=EcoGene:EG11917,GeneID:948508;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;gene_synonym=ECK3993,JW3965;locus_tag=b4001 NC_000913.3 RefSeq CDS 4200566 4201261 . + 0 ID=cds3919;Parent=gene4083;Dbxref=ASAP:ABE-0013079,UniProtKB/Swiss-Prot:P32681,Genbank:NP_418429.1,EcoGene:EG11917,GeneID:948508;Name=NP_418429.1;gbkey=CDS;gene=yjaH;product=DUF1481 family putative lipoprotein;protein_id=NP_418429.1;transl_table=11 NC_000913.3 RefSeq gene 4201263 4201688 . - . ID=gene4084;Dbxref=EcoGene:EG11918,GeneID:948507;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;gene_synonym=ECK3994,JW5546,yjaI,zra;locus_tag=b4002 NC_000913.3 RefSeq CDS 4201263 4201688 . - 0 ID=cds3920;Parent=gene4084;Dbxref=ASAP:ABE-0013081,UniProtKB/Swiss-Prot:P0AAA9,Genbank:NP_418430.2,EcoGene:EG11918,GeneID:948507;Name=NP_418430.2;gbkey=CDS;gene=zraP;product=Zn-dependent periplasmic chaperone;protein_id=NP_418430.2;transl_table=11 NC_000913.3 RefSeq gene 4201926 4203323 . + . ID=gene4085;Dbxref=EcoGene:EG10008,GeneID:948506;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;gene_synonym=ECK3995,hydH,JW3967;locus_tag=b4003 NC_000913.3 RefSeq CDS 4201926 4203323 . + 0 ID=cds3921;Parent=gene4085;Dbxref=ASAP:ABE-0013088,UniProtKB/Swiss-Prot:P14377,Genbank:NP_418431.1,EcoGene:EG10008,GeneID:948506;Name=NP_418431.1;gbkey=CDS;gene=zraS;product=sensory histidine kinase in two-component regulatory system with ZraR;protein_id=NP_418431.1;transl_table=11 NC_000913.3 RefSeq gene 4203320 4204645 . + . ID=gene4086;Dbxref=EcoGene:EG10482,GeneID:948505;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;gene_synonym=ECK3996,hydG,JW3968;locus_tag=b4004 NC_000913.3 RefSeq CDS 4203320 4204645 . + 0 ID=cds3922;Parent=gene4086;Dbxref=ASAP:ABE-0013093,UniProtKB/Swiss-Prot:P14375,Genbank:NP_418432.1,EcoGene:EG10482,GeneID:948505;Name=NP_418432.1;gbkey=CDS;gene=zraR;product=fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein;protein_id=NP_418432.1;transl_table=11 NC_000913.3 RefSeq gene 4204642 4205931 . - . ID=gene4087;Dbxref=EcoGene:EG10792,GeneID:948504;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;gene_synonym=adth,ECK3997,JW3969;locus_tag=b4005 NC_000913.3 RefSeq CDS 4204642 4205931 . - 0 ID=cds3923;Parent=gene4087;Dbxref=ASAP:ABE-0013095,UniProtKB/Swiss-Prot:P15640,Genbank:NP_418433.1,EcoGene:EG10792,GeneID:948504;Name=NP_418433.1;Note=phosphoribosylglycinamide synthetase %3D GAR synthetase;gbkey=CDS;gene=purD;product=phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase;protein_id=NP_418433.1;transl_table=11 NC_000913.3 RefSeq gene 4205943 4207532 . - . ID=gene4088;Dbxref=EcoGene:EG10795,GeneID:948503;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;gene_synonym=ECK3998,JW3970;locus_tag=b4006 NC_000913.3 RefSeq CDS 4205943 4207532 . - 0 ID=cds3924;Parent=gene4088;Dbxref=ASAP:ABE-0013097,UniProtKB/Swiss-Prot:P15639,Genbank:NP_418434.1,EcoGene:EG10795,GeneID:948503;Name=NP_418434.1;gbkey=CDS;gene=purH;product=IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase;protein_id=NP_418434.1;transl_table=11 NC_000913.3 RefSeq gene 4208147 4209688 . + . ID=gene4089;Dbxref=EcoGene:EG30088,GeneID:948511;Name=rrsE;gbkey=Gene;gene=rrsE;gene_biotype=rRNA;gene_synonym=ECK3999,JWR0107;locus_tag=b4007 NC_000913.3 RefSeq rRNA 4208147 4209688 . + . ID=rna163;Parent=gene4089;Dbxref=ASAP:ABE-0013103,EcoGene:EG30088,GeneID:948511;gbkey=rRNA;gene=rrsE;product=16S ribosomal RNA of rrnE operon NC_000913.3 RefSeq exon 4208147 4209688 . + . ID=id528;Parent=rna163;Dbxref=ASAP:ABE-0013103,EcoGene:EG30088,GeneID:948511;gbkey=rRNA;gene=rrsE;product=16S ribosomal RNA of rrnE operon NC_000913.3 RefSeq gene 4209774 4209849 . + . ID=gene4090;Dbxref=EcoGene:EG30034,GeneID:948510;Name=gltV;gbkey=Gene;gene=gltV;gene_biotype=tRNA;gene_synonym=ECK4000,JWR0108,tgtE;locus_tag=b4008 NC_000913.3 RefSeq tRNA 4209774 4209849 . + . ID=rna164;Parent=gene4090;Dbxref=ASAP:ABE-0013105,EcoGene:EG30034,GeneID:948510;Note=anticodon: UUC;gbkey=tRNA;gene=gltV;product=tRNA-Glu NC_000913.3 RefSeq exon 4209774 4209849 . + . ID=id529;Parent=rna164;Dbxref=ASAP:ABE-0013105,EcoGene:EG30034,GeneID:948510;Note=anticodon: UUC;gbkey=tRNA;gene=gltV;product=tRNA-Glu NC_000913.3 RefSeq gene 4210043 4212946 . + . ID=gene4091;Dbxref=EcoGene:EG30081,GeneID:948509;Name=rrlE;gbkey=Gene;gene=rrlE;gene_biotype=rRNA;gene_synonym=ECK4001,JWR0109;locus_tag=b4009 NC_000913.3 RefSeq rRNA 4210043 4212946 . + . ID=rna165;Parent=gene4091;Dbxref=ASAP:ABE-0013107,EcoGene:EG30081,GeneID:948509;gbkey=rRNA;gene=rrlE;product=23S ribosomal RNA of rrnE operon NC_000913.3 RefSeq exon 4210043 4212946 . + . ID=id530;Parent=rna165;Dbxref=ASAP:ABE-0013107,EcoGene:EG30081,GeneID:948509;gbkey=rRNA;gene=rrlE;product=23S ribosomal RNA of rrnE operon NC_000913.3 RefSeq gene 4213040 4213159 . + . ID=gene4092;Dbxref=EcoGene:EG30074,GeneID:948516;Name=rrfE;gbkey=Gene;gene=rrfE;gene_biotype=rRNA;gene_synonym=ECK4002,JWR0110;locus_tag=b4010 NC_000913.3 RefSeq rRNA 4213040 4213159 . + . ID=rna166;Parent=gene4092;Dbxref=ASAP:ABE-0013109,EcoGene:EG30074,GeneID:948516;gbkey=rRNA;gene=rrfE;product=5S ribosomal RNA of rrnE operon NC_000913.3 RefSeq exon 4213040 4213159 . + . ID=id531;Parent=rna166;Dbxref=ASAP:ABE-0013109,EcoGene:EG30074,GeneID:948516;gbkey=rRNA;gene=rrfE;product=5S ribosomal RNA of rrnE operon NC_000913.3 RefSeq gene 4213234 4213617 . + . ID=gene4093;Dbxref=EcoGene:EG11206,GeneID:948515;Name=yjaA;gbkey=Gene;gene=yjaA;gene_biotype=protein_coding;gene_synonym=ECK4003,JW3971;locus_tag=b4011 NC_000913.3 RefSeq CDS 4213234 4213617 . + 0 ID=cds3925;Parent=gene4093;Dbxref=ASAP:ABE-0013112,UniProtKB/Swiss-Prot:P09162,Genbank:NP_418435.1,EcoGene:EG11206,GeneID:948515;Name=NP_418435.1;gbkey=CDS;gene=yjaA;product=stress-induced protein;protein_id=NP_418435.1;transl_table=11 NC_000913.3 RefSeq gene 4213680 4214123 . - . ID=gene4094;Dbxref=EcoGene:EG11207,GeneID:948514;Name=yjaB;gbkey=Gene;gene=yjaB;gene_biotype=protein_coding;gene_synonym=ECK4004,JW3972;locus_tag=b4012 NC_000913.3 RefSeq CDS 4213680 4214123 . - 0 ID=cds3926;Parent=gene4094;Dbxref=ASAP:ABE-0013114,UniProtKB/Swiss-Prot:P09163,Genbank:NP_418436.1,EcoGene:EG11207,GeneID:948514;Name=NP_418436.1;gbkey=CDS;gene=yjaB;product=GNAT-family putative N-acetyltransferase%3B acetyl coenzyme A-binding protein;protein_id=NP_418436.1;transl_table=11 NC_000913.3 RefSeq gene 4214280 4215209 . + . ID=gene4095;Dbxref=EcoGene:EG10581,GeneID:948513;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;gene_synonym=ECK4005,JW3973;locus_tag=b4013 NC_000913.3 RefSeq CDS 4214280 4215209 . + 0 ID=cds3927;Parent=gene4095;Dbxref=ASAP:ABE-0013121,UniProtKB/Swiss-Prot:P07623,Genbank:NP_418437.1,EcoGene:EG10581,GeneID:948513;Name=NP_418437.1;gbkey=CDS;gene=metA;product=homoserine O-transsuccinylase;protein_id=NP_418437.1;transl_table=11 NC_000913.3 RefSeq gene 4215478 4217079 . + . ID=gene4096;Dbxref=EcoGene:EG10023,GeneID:948512;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;gene_synonym=ECK4006,JW3974,mas;locus_tag=b4014 NC_000913.3 RefSeq CDS 4215478 4217079 . + 0 ID=cds3928;Parent=gene4096;Dbxref=ASAP:ABE-0013125,UniProtKB/Swiss-Prot:P08997,Genbank:NP_418438.1,EcoGene:EG10023,GeneID:948512;Name=NP_418438.1;gbkey=CDS;gene=aceB;product=malate synthase A;protein_id=NP_418438.1;transl_table=11 NC_000913.3 RefSeq gene 4217109 4218413 . + . ID=gene4097;Dbxref=EcoGene:EG10022,GeneID:948517;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;gene_synonym=ECK4007,icl,JW3975;locus_tag=b4015 NC_000913.3 RefSeq CDS 4217109 4218413 . + 0 ID=cds3929;Parent=gene4097;Dbxref=ASAP:ABE-0013128,UniProtKB/Swiss-Prot:P0A9G6,Genbank:NP_418439.1,EcoGene:EG10022,GeneID:948517;Name=NP_418439.1;gbkey=CDS;gene=aceA;product=isocitrate lyase;protein_id=NP_418439.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4218436 4218567 . + . ID=id532;Note=REP311 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4218596 4220332 . + . ID=gene4098;Dbxref=EcoGene:EG10026,GeneID:944797;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;gene_synonym=ECK4008,JW3976;locus_tag=b4016 NC_000913.3 RefSeq CDS 4218596 4220332 . + 0 ID=cds3930;Parent=gene4098;Dbxref=ASAP:ABE-0013131,UniProtKB/Swiss-Prot:P11071,Genbank:NP_418440.1,EcoGene:EG10026,GeneID:944797;Name=NP_418440.1;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase kinase/phosphatase;protein_id=NP_418440.1;transl_table=11 NC_000913.3 RefSeq gene 4220301 4222487 . - . ID=gene4099;Dbxref=EcoGene:EG11208,GeneID:944933;Name=arpA;gbkey=Gene;gene=arpA;gene_biotype=protein_coding;gene_synonym=ECK4009,JW3977,yjaC;locus_tag=b4017 NC_000913.3 RefSeq CDS 4220301 4222487 . - 0 ID=cds3931;Parent=gene4099;Dbxref=ASAP:ABE-0013133,UniProtKB/Swiss-Prot:P23325,Genbank:NP_418441.1,EcoGene:EG11208,GeneID:944933;Name=NP_418441.1;gbkey=CDS;gene=arpA;product=ankyrin repeat protein;protein_id=NP_418441.1;transl_table=11 NC_000913.3 RefSeq gene 4222804 4223628 . - . ID=gene4100;Dbxref=EcoGene:EG10491,GeneID:948524;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;gene_synonym=ECK4010,JW3978;locus_tag=b4018 NC_000913.3 RefSeq CDS 4222804 4223628 . - 0 ID=cds3932;Parent=gene4100;Dbxref=ASAP:ABE-0013136,UniProtKB/Swiss-Prot:P16528,Genbank:NP_418442.2,EcoGene:EG10491,GeneID:948524;Name=NP_418442.2;Note=repressor of aceBA operon;gbkey=CDS;gene=iclR;product=transcriptional repressor;protein_id=NP_418442.2;transl_table=11 NC_000913.3 RefSeq gene 4223828 4227511 . + . ID=gene4101;Dbxref=EcoGene:EG10587,GeneID:948522;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;gene_synonym=ECK4011,JW3979;locus_tag=b4019 NC_000913.3 RefSeq CDS 4223828 4227511 . + 0 ID=cds3933;Parent=gene4101;Dbxref=ASAP:ABE-0013140,UniProtKB/Swiss-Prot:P13009,Genbank:NP_418443.1,EcoGene:EG10587,GeneID:948522;Name=NP_418443.1;Note=B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase%2C repressor of metE and metF;gbkey=CDS;gene=metH;product=homocysteine-N5-methyltetrahydrofolate transmethylase%2C B12-dependent;protein_id=NP_418443.1;transl_table=11 NC_000913.3 RefSeq gene 4227731 4229362 . + . ID=gene4102;Dbxref=EcoGene:EG11919,GeneID:948521;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;gene_synonym=ECK4012,JW3980;locus_tag=b4020 NC_000913.3 RefSeq CDS 4227731 4229362 . + 0 ID=cds3934;Parent=gene4102;Dbxref=ASAP:ABE-0013143,UniProtKB/Swiss-Prot:P0AF43,Genbank:NP_418444.1,EcoGene:EG11919,GeneID:948521;Name=NP_418444.1;Note=putative alpha helix protein;gbkey=CDS;gene=yjbB;product=putative Na+/Pi-cotransporter;protein_id=NP_418444.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4229376 4229445 . + . ID=id533;Note=REP312 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4229453 4230142 . - . ID=gene4103;Dbxref=EcoGene:EG11920,GeneID:948520;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;gene_synonym=ECK4013,JW3981;locus_tag=b4021 NC_000913.3 RefSeq CDS 4229453 4230142 . - 0 ID=cds3935;Parent=gene4103;Dbxref=ASAP:ABE-0013146,UniProtKB/Swiss-Prot:P0A7C6,Genbank:NP_418445.1,EcoGene:EG11920,GeneID:948520;Name=NP_418445.1;Note=peptidase E%2C a dipeptidase where amino-terminal residue is aspartate;gbkey=CDS;gene=pepE;product=peptidase E%2C alpha-aspartyl dipeptidase;protein_id=NP_418445.1;transl_table=11 NC_000913.3 RefSeq gene 4230354 4231226 . + . ID=gene4104;Dbxref=EcoGene:EG11921,GeneID:948519;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;gene_synonym=ECK4014,JW3982,yjbC;locus_tag=b4022 NC_000913.3 RefSeq CDS 4230354 4231226 . + 0 ID=cds3936;Parent=gene4104;Dbxref=ASAP:ABE-0013150,UniProtKB/Swiss-Prot:P32684,Genbank:NP_418446.1,EcoGene:EG11921,GeneID:948519;Name=NP_418446.1;gbkey=CDS;gene=rluF;product=23S rRNA pseudouridine(2604) synthase;protein_id=NP_418446.1;transl_table=11 NC_000913.3 RefSeq gene 4231359 4231631 . - . ID=gene4105;Dbxref=EcoGene:EG11922,GeneID:948518;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;gene_synonym=ECK4015,JW3983;locus_tag=b4023 NC_000913.3 RefSeq CDS 4231359 4231631 . - 0 ID=cds3937;Parent=gene4105;Dbxref=ASAP:ABE-0013153,UniProtKB/Swiss-Prot:P32685,Genbank:NP_418447.1,EcoGene:EG11922,GeneID:948518;Name=NP_418447.1;gbkey=CDS;gene=yjbD;product=DUF3811 family protein;protein_id=NP_418447.1;transl_table=11 NC_000913.3 RefSeq gene 4231884 4233233 . - . ID=gene4106;Dbxref=EcoGene:EG10550,GeneID:948531;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;gene_synonym=apk,ECK4016,JW3984;locus_tag=b4024 NC_000913.3 RefSeq CDS 4231884 4233233 . - 0 ID=cds3938;Parent=gene4106;Dbxref=ASAP:ABE-0013156,UniProtKB/Swiss-Prot:P08660,Genbank:NP_418448.1,EcoGene:EG10550,GeneID:948531;Name=NP_418448.1;Note=aspartokinase III%2C lysine sensitive;gbkey=CDS;gene=lysC;product=lysine-sensitive aspartokinase 3;protein_id=NP_418448.1;transl_table=11 NC_000913.3 RefSeq gene 4233758 4235407 . + . ID=gene4107;Dbxref=EcoGene:EG10702,GeneID:948535;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;gene_synonym=ECK4017,JW3985;locus_tag=b4025 NC_000913.3 RefSeq CDS 4233758 4235407 . + 0 ID=cds3939;Parent=gene4107;Dbxref=ASAP:ABE-0013163,UniProtKB/Swiss-Prot:P0A6T1,Genbank:NP_418449.1,EcoGene:EG10702,GeneID:948535;Name=NP_418449.1;gbkey=CDS;gene=pgi;product=glucosephosphate isomerase;protein_id=NP_418449.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4235421 4235497 . + . ID=id534;Note=REP313 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4235906 4236148 . + . ID=gene4108;Dbxref=EcoGene:EG11923,GeneID:948534;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;gene_synonym=ECK4018,JW3986;locus_tag=b4026 NC_000913.3 RefSeq CDS 4235906 4236148 . + 0 ID=cds3940;Parent=gene4108;Dbxref=ASAP:ABE-0013168,UniProtKB/Swiss-Prot:P0AF45,Genbank:NP_418450.1,EcoGene:EG11923,GeneID:948534;Name=NP_418450.1;gbkey=CDS;gene=yjbE;product=extracellular polysaccharide production threonine-rich protein;protein_id=NP_418450.1;transl_table=11 NC_000913.3 RefSeq gene 4236262 4236900 . + . ID=gene4109;Dbxref=EcoGene:EG11924,GeneID:948533;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;gene_synonym=ECK4019,JW5711;locus_tag=b4027 NC_000913.3 RefSeq CDS 4236262 4236900 . + 0 ID=cds3941;Parent=gene4109;Dbxref=ASAP:ABE-0013172,UniProtKB/Swiss-Prot:P32687,Genbank:NP_418451.4,EcoGene:EG11924,GeneID:948533;Name=NP_418451.4;gbkey=CDS;gene=yjbF;product=extracellular polysaccharide production lipoprotein;protein_id=NP_418451.4;transl_table=11 NC_000913.3 RefSeq gene 4236897 4237634 . + . ID=gene4110;Dbxref=EcoGene:EG11925,GeneID:948526;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;gene_synonym=ECK4020,JW3988;locus_tag=b4028 NC_000913.3 RefSeq CDS 4236897 4237634 . + 0 ID=cds3942;Parent=gene4110;Dbxref=ASAP:ABE-0013174,UniProtKB/Swiss-Prot:P32688,Genbank:NP_418452.1,EcoGene:EG11925,GeneID:948526;Name=NP_418452.1;gbkey=CDS;gene=yjbG;product=extracellular polysaccharide export OMA protein;protein_id=NP_418452.1;transl_table=11 NC_000913.3 RefSeq gene 4237634 4239730 . + . ID=gene4111;Dbxref=EcoGene:EG11926,GeneID:948527;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;gene_synonym=ECK4021,JW3989;locus_tag=b4029 NC_000913.3 RefSeq CDS 4237634 4239730 . + 0 ID=cds3943;Parent=gene4111;Dbxref=ASAP:ABE-0013176,UniProtKB/Swiss-Prot:P32689,Genbank:NP_418453.1,EcoGene:EG11926,GeneID:948527;Name=NP_418453.1;gbkey=CDS;gene=yjbH;product=DUF940 family extracellular polysaccharide protein;protein_id=NP_418453.1;transl_table=11 NC_000913.3 RefSeq gene 4239777 4240055 . - . ID=gene4112;Dbxref=EcoGene:EG14459,GeneID:5061528;Name=yjbT;gbkey=Gene;gene=yjbT;gene_biotype=protein_coding;gene_synonym=ECK4428;locus_tag=b4620 NC_000913.3 RefSeq CDS 4239777 4240055 . - 0 ID=cds3944;Parent=gene4112;Dbxref=UniProtKB/Swiss-Prot:A5A628,Genbank:YP_001165332.1,EcoGene:EG14459,GeneID:5061528;Name=YP_001165332.1;gbkey=CDS;gene=yjbT;product=putative periplasmic protein;protein_id=YP_001165332.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4240157 4240193 . + . ID=id535;Note=REP314 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4240325 4240735 . + . ID=gene4113;Dbxref=EcoGene:EG11209,GeneID:948528;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;gene_synonym=ECK4022,JW3990,yjbA;locus_tag=b4030 NC_000913.3 RefSeq CDS 4240325 4240735 . + 0 ID=cds3945;Parent=gene4113;Dbxref=ASAP:ABE-0013187,UniProtKB/Swiss-Prot:P0A7C8,Genbank:NP_418454.1,EcoGene:EG11209,GeneID:948528;Name=NP_418454.1;gbkey=CDS;gene=psiE;product=phosphate starvation inducible protein;protein_id=NP_418454.1;transl_table=11 NC_000913.3 RefSeq gene 4240779 4242254 . - . ID=gene4114;Dbxref=EcoGene:EG11076,GeneID:948529;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;gene_synonym=ECK4023,JW3991;locus_tag=b4031 NC_000913.3 RefSeq CDS 4240779 4242254 . - 0 ID=cds3946;Parent=gene4114;Dbxref=ASAP:ABE-0013189,UniProtKB/Swiss-Prot:P0AGF4,Genbank:NP_418455.1,EcoGene:EG11076,GeneID:948529;Name=NP_418455.1;Note=xylose-proton symport;gbkey=CDS;gene=xylE;product=D-xylose transporter;protein_id=NP_418455.1;transl_table=11 NC_000913.3 RefSeq gene 4242626 4243516 . - . ID=gene4115;Dbxref=EcoGene:EG10556,GeneID:948530;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;gene_synonym=ECK4024,JW3992,malJ;locus_tag=b4032 NC_000913.3 RefSeq CDS 4242626 4243516 . - 0 ID=cds3947;Parent=gene4115;Dbxref=ASAP:ABE-0013193,UniProtKB/Swiss-Prot:P68183,Genbank:NP_418456.1,EcoGene:EG10556,GeneID:948530;Name=NP_418456.1;Note=part of maltose permease%2C inner membrane%3B membrane component of ABC superfamily;gbkey=CDS;gene=malG;product=maltose transporter subunit;protein_id=NP_418456.1;transl_table=11 NC_000913.3 RefSeq gene 4243531 4245075 . - . ID=gene4116;Dbxref=EcoGene:EG10555,GeneID:948532;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;gene_synonym=ECK4025,JW3993,malJ;locus_tag=b4033 NC_000913.3 RefSeq CDS 4243531 4245075 . - 0 ID=cds3948;Parent=gene4116;Dbxref=ASAP:ABE-0013195,UniProtKB/Swiss-Prot:P02916,Genbank:NP_418457.1,EcoGene:EG10555,GeneID:948532;Name=NP_418457.1;Note=part of maltose permease%2C periplasmic%3B membrane component of ABC superfamily;gbkey=CDS;gene=malF;product=maltose transporter subunit;protein_id=NP_418457.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4245092 4245217 . + . ID=id536;Note=REP315 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4245229 4246419 . - . ID=gene4117;Dbxref=EcoGene:EG10554,GeneID:948538;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;gene_synonym=ECK4026,JW3994,malJ;locus_tag=b4034 NC_000913.3 RefSeq CDS 4245229 4246419 . - 0 ID=cds3949;Parent=gene4117;Dbxref=ASAP:ABE-0013200,UniProtKB/Swiss-Prot:P0AEX9,Genbank:NP_418458.1,EcoGene:EG10554,GeneID:948538;Name=NP_418458.1;Note=periplasmic maltose-binding protein%3B substrate recognition for transport and chemotaxis%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=malE;product=maltose transporter subunit;protein_id=NP_418458.1;transl_table=11 NC_000913.3 RefSeq gene 4246784 4247899 . + . ID=gene4118;Dbxref=EcoGene:EG10558,GeneID:948537;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;gene_synonym=ECK4027,JW3995;locus_tag=b4035 NC_000913.3 RefSeq CDS 4246784 4247899 . + 0 ID=cds3950;Parent=gene4118;Dbxref=ASAP:ABE-0013216,UniProtKB/Swiss-Prot:P68187,Genbank:NP_418459.1,EcoGene:EG10558,GeneID:948537;Name=NP_418459.1;Note=ATP-binding component of transport system for maltose;gbkey=CDS;gene=malK;product=maltose ABC transportor ATPase;protein_id=NP_418459.1;transl_table=11 NC_000913.3 RefSeq gene 4247971 4249311 . + . ID=gene4119;Dbxref=EcoGene:EG10528,GeneID:948548;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;gene_synonym=ECK4028,JW3996,malB,malL;locus_tag=b4036 NC_000913.3 RefSeq CDS 4247971 4249311 . + 0 ID=cds3951;Parent=gene4119;Dbxref=ASAP:ABE-0013218,UniProtKB/Swiss-Prot:P02943,Genbank:NP_418460.1,EcoGene:EG10528,GeneID:948548;Name=NP_418460.1;Note=phage lambda receptor protein%3B maltose high-affinity receptor;gbkey=CDS;gene=lamB;product=maltose outer membrane porin (maltoporin);protein_id=NP_418460.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4249321 4249445 . + . ID=id537;Note=REP316 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4249554 4250474 . + . ID=gene4120;Dbxref=EcoGene:EG10559,GeneID:948547;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;gene_synonym=ECK4029,JW3997,molA;locus_tag=b4037 NC_000913.3 RefSeq CDS 4249554 4250474 . + 0 ID=cds3952;Parent=gene4120;Dbxref=ASAP:ABE-0013221,UniProtKB/Swiss-Prot:P03841,Genbank:NP_418461.1,EcoGene:EG10559,GeneID:948547;Name=NP_418461.1;Note=periplasmic protein of mal regulon;gbkey=CDS;gene=malM;product=maltose regulon periplasmic protein;protein_id=NP_418461.1;transl_table=11 NC_000913.3 RefSeq gene 4250703 4252283 . + . ID=gene4121;Dbxref=EcoGene:EG11927,GeneID:948546;Name=yjbI;gbkey=Gene;gene=yjbI;gene_biotype=pseudogene;gene_synonym=ECK4030,JW3998;locus_tag=b4038;pseudo=true NC_000913.3 RefSeq CDS 4250703 4250885 . + 0 ID=cds3953;Parent=gene4121;Dbxref=ASAP:ABE-0013224,UniProtKB/Swiss-Prot:P32690,EcoGene:EG11927,GeneID:948546;Note=pseudogene%2C SopA-related%2C pentapeptide repeats-containing;gbkey=CDS;gene=yjbI;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4250885 4250959 . + 0 ID=cds3953;Parent=gene4121;Dbxref=ASAP:ABE-0013224,UniProtKB/Swiss-Prot:P32690,EcoGene:EG11927,GeneID:948546;Note=pseudogene%2C SopA-related%2C pentapeptide repeats-containing;gbkey=CDS;gene=yjbI;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4250961 4252283 . + 0 ID=cds3953;Parent=gene4121;Dbxref=ASAP:ABE-0013224,UniProtKB/Swiss-Prot:P32690,EcoGene:EG11927,GeneID:948546;Note=pseudogene%2C SopA-related%2C pentapeptide repeats-containing;gbkey=CDS;gene=yjbI;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4252506 4253003 . + . ID=gene4122;Dbxref=EcoGene:EG11369,GeneID:948545;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;gene_synonym=ECK4031,JW5713,sdgG?;locus_tag=b4039 NC_000913.3 RefSeq CDS 4252506 4253003 . + 0 ID=cds3954;Parent=gene4122;Dbxref=ASAP:ABE-0013227,UniProtKB/Swiss-Prot:P26602,Genbank:NP_418463.4,EcoGene:EG11369,GeneID:948545;Name=NP_418463.4;Note=chorismate lyase;gbkey=CDS;gene=ubiC;product=chorismate--pyruvate lyase;protein_id=NP_418463.4;transl_table=11 NC_000913.3 RefSeq gene 4253016 4253888 . + . ID=gene4123;Dbxref=EcoGene:EG11370,GeneID:948540;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;gene_synonym=cyr,ECK4032,JW4000,sdgG?;locus_tag=b4040 NC_000913.3 RefSeq CDS 4253016 4253888 . + 0 ID=cds3955;Parent=gene4123;Dbxref=ASAP:ABE-0013229,UniProtKB/Swiss-Prot:P0AGK1,Genbank:NP_418464.1,EcoGene:EG11370,GeneID:948540;Name=NP_418464.1;Note=4-hydroxybenzoate-octaprenyltransferase;gbkey=CDS;gene=ubiA;product=p-hydroxybenzoate octaprenyltransferase;protein_id=NP_418464.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4253901 4254030 . + . ID=id538;Note=RIP317 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4254043 4256466 . - . ID=gene4124;Dbxref=EcoGene:EG10740,GeneID:948541;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;gene_synonym=ECK4033,JW4001;locus_tag=b4041 NC_000913.3 RefSeq CDS 4254043 4256466 . - 0 ID=cds3956;Parent=gene4124;Dbxref=ASAP:ABE-0013232,UniProtKB/Swiss-Prot:P0A7A7,Genbank:NP_418465.4,EcoGene:EG10740,GeneID:948541;Name=NP_418465.4;Note=glycerol-3-phosphate acyltransferase;gbkey=CDS;gene=plsB;product=glycerol-3-phosphate O-acyltransferase;protein_id=NP_418465.4;transl_table=11 NC_000913.3 RefSeq gene 4256637 4257005 . + . ID=gene4125;Dbxref=EcoGene:EG10224,GeneID:948543;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;gene_synonym=ECK4034,JW4002;locus_tag=b4042 NC_000913.3 RefSeq CDS 4256637 4257005 . + 0 ID=cds3957;Parent=gene4125;Dbxref=ASAP:ABE-0013235,UniProtKB/Swiss-Prot:P0ABN1,Genbank:NP_418466.1,EcoGene:EG10224,GeneID:948543;Name=NP_418466.1;gbkey=CDS;gene=dgkA;product=diacylglycerol kinase;protein_id=NP_418466.1;transl_table=11 NC_000913.3 RefSeq gene 4257115 4257723 . + . ID=gene4126;Dbxref=EcoGene:EG10533,GeneID:948544;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;gene_synonym=ECK4035,exrA,JW4003,spr,tsl,umuA;locus_tag=b4043 NC_000913.3 RefSeq CDS 4257115 4257723 . + 0 ID=cds3958;Parent=gene4126;Dbxref=ASAP:ABE-0013241,UniProtKB/Swiss-Prot:P0A7C2,Genbank:NP_418467.1,EcoGene:EG10533,GeneID:948544;Name=NP_418467.1;Note=regulator for SOS(lexA) regulon;gbkey=CDS;gene=lexA;product=transcriptional repressor of SOS regulon;protein_id=NP_418467.1;transl_table=11 NC_000913.3 RefSeq gene 4257742 4259121 . + . ID=gene4127;Dbxref=EcoGene:EG11491,GeneID:948554;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;gene_synonym=ECK4036,JW4004;locus_tag=b4044 NC_000913.3 RefSeq CDS 4257742 4259121 . + 0 ID=cds3959;Parent=gene4127;Dbxref=ASAP:ABE-0013243,UniProtKB/Swiss-Prot:P28303,Genbank:NP_418468.3,EcoGene:EG11491,GeneID:948554;Name=NP_418468.3;Note=DNA-damage-inducible protein F;gbkey=CDS;gene=dinF;product=oxidative stress resistance protein%3B putative MATE family efflux pump%3B UV and mitomycin C inducible protein;protein_id=NP_418468.3;transl_table=11 NC_000913.3 RefSeq gene 4259237 4259446 . + . ID=gene4128;Dbxref=EcoGene:EG11928,GeneID:948553;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;gene_synonym=ECK4037,JW4005;locus_tag=b4045 NC_000913.3 RefSeq CDS 4259237 4259446 . + 0 ID=cds3960;Parent=gene4128;Dbxref=ASAP:ABE-0013247,UniProtKB/Swiss-Prot:P68206,Genbank:NP_418469.1,EcoGene:EG11928,GeneID:948553;Name=NP_418469.1;gbkey=CDS;gene=yjbJ;product=stress-induced protein%2C UPF0337 family;protein_id=NP_418469.1;transl_table=11 NC_000913.3 RefSeq gene 4259488 4260003 . - . ID=gene4129;Dbxref=EcoGene:EG11929,GeneID:948552;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;gene_synonym=ECK4038,JW5714,yjbK;locus_tag=b4046 NC_000913.3 RefSeq CDS 4259488 4260003 . - 0 ID=cds3961;Parent=gene4129;Dbxref=ASAP:ABE-0013249,UniProtKB/Swiss-Prot:P0AC51,Genbank:NP_418470.4,EcoGene:EG11929,GeneID:948552;Name=NP_418470.4;gbkey=CDS;gene=zur;product=transcriptional repressor%2C Zn(II)-binding;protein_id=NP_418470.4;transl_table=11 NC_000913.3 RefSeq gene 4260321 4260575 . + . ID=gene4130;Dbxref=EcoGene:EG11930,GeneID:948551;Name=yjbL;gbkey=Gene;gene=yjbL;gene_biotype=protein_coding;gene_synonym=ECK4039,JW4007;locus_tag=b4047 NC_000913.3 RefSeq CDS 4260321 4260575 . + 0 ID=cds3962;Parent=gene4130;Dbxref=ASAP:ABE-0013253,UniProtKB/Swiss-Prot:P32693,Genbank:NP_418471.1,EcoGene:EG11930,GeneID:948551;Name=NP_418471.1;gbkey=CDS;gene=yjbL;product=uncharacterized protein;protein_id=NP_418471.1;transl_table=11 NC_000913.3 RefSeq gene 4260599 4261306 . + . ID=gene4131;Dbxref=EcoGene:EG11931,GeneID:948550;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;gene_synonym=ECK4040,JW4008;locus_tag=b4048 NC_000913.3 RefSeq CDS 4260599 4261306 . + 0 ID=cds3963;Parent=gene4131;Dbxref=ASAP:ABE-0013255,UniProtKB/Swiss-Prot:P32694,Genbank:NP_418472.1,EcoGene:EG11931,GeneID:948550;Name=NP_418472.1;gbkey=CDS;gene=yjbM;product=uncharacterized protein;protein_id=NP_418472.1;transl_table=11 NC_000913.3 RefSeq gene 4261669 4262706 . + . ID=gene4132;Dbxref=EcoGene:EG11932,GeneID:948558;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;gene_synonym=ECK4041,JW5950,yjbN;locus_tag=b4049 NC_000913.3 RefSeq CDS 4261669 4262706 . + 0 ID=cds3964;Parent=gene4132;Dbxref=ASAP:ABE-0013258,UniProtKB/Swiss-Prot:P32695,Genbank:NP_418473.3,EcoGene:EG11932,GeneID:948558;Name=NP_418473.3;gbkey=CDS;gene=dusA;product=tRNA-dihydrouridine synthase A;protein_id=NP_418473.3;transl_table=11 NC_000913.3 RefSeq gene 4262840 4263082 . + . ID=gene4133;Dbxref=EcoGene:EG11933,GeneID:948557;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;gene_synonym=ECK4042,JW5716,yjbO;locus_tag=b4050 NC_000913.3 RefSeq CDS 4262840 4263082 . + 0 ID=cds3965;Parent=gene4133;Dbxref=ASAP:ABE-0013260,UniProtKB/Swiss-Prot:P32696,Genbank:NP_418474.4,EcoGene:EG11933,GeneID:948557;Name=NP_418474.4;gbkey=CDS;gene=pspG;product=phage shock protein G;protein_id=NP_418474.4;transl_table=11 NC_000913.3 RefSeq gene 4263248 4264231 . - . ID=gene4134;Dbxref=EcoGene:EG11492,GeneID:948556;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;gene_synonym=ECK4043,hcz,hzc,JW4011,qor;locus_tag=b4051 NC_000913.3 RefSeq CDS 4263248 4264231 . - 0 ID=cds3966;Parent=gene4134;Dbxref=ASAP:ABE-0013262,UniProtKB/Swiss-Prot:P28304,Genbank:NP_418475.1,EcoGene:EG11492,GeneID:948556;Name=NP_418475.1;Note=quinone oxidoreductase;gbkey=CDS;gene=qorA;product=quinone oxidoreductase%2C NADPH-dependent;protein_id=NP_418475.1;transl_table=11 NC_000913.3 RefSeq gene 4264314 4265729 . + . ID=gene4135;Dbxref=EcoGene:EG10236,GeneID:948555;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;gene_synonym=ECK4044,groP,grpA,grpD,JW4012;locus_tag=b4052 NC_000913.3 RefSeq CDS 4264314 4265729 . + 0 ID=cds3967;Parent=gene4135;Dbxref=ASAP:ABE-0013269,UniProtKB/Swiss-Prot:P0ACB0,Genbank:NP_418476.1,EcoGene:EG10236,GeneID:948555;Name=NP_418476.1;Note=replicative DNA helicase%3B part of primosome;gbkey=CDS;gene=dnaB;product=replicative DNA helicase;protein_id=NP_418476.1;transl_table=11 NC_000913.3 RefSeq gene 4265782 4266861 . + . ID=gene4136;Dbxref=EcoGene:EG10001,GeneID:948564;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;gene_synonym=ECK4045,JW4013;locus_tag=b4053 NC_000913.3 RefSeq CDS 4265782 4266861 . + 0 ID=cds3968;Parent=gene4136;Dbxref=ASAP:ABE-0013272,UniProtKB/Swiss-Prot:P0A6B4,Genbank:NP_418477.1,EcoGene:EG10001,GeneID:948564;Name=NP_418477.1;Note=alanine racemase 1;gbkey=CDS;gene=alr;product=alanine racemase%2C biosynthetic%2C PLP-binding;protein_id=NP_418477.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4266888 4266984 . + . ID=id539;Note=RIP318 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4267114 4268307 . + . ID=gene4137;Dbxref=EcoGene:EG11040,GeneID:948563;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;gene_synonym=ECK4046,JW4014;locus_tag=b4054 NC_000913.3 RefSeq CDS 4267114 4268307 . + 0 ID=cds3969;Parent=gene4137;Dbxref=ASAP:ABE-0013278,UniProtKB/Swiss-Prot:P04693,Genbank:NP_418478.1,EcoGene:EG11040,GeneID:948563;Name=NP_418478.1;Note=tyrosine aminotransferase%2C tyrosine repressible;gbkey=CDS;gene=tyrB;product=tyrosine aminotransferase%2C tyrosine-repressible%2C PLP-dependent;protein_id=NP_418478.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4268317 4268340 . + . ID=id540;Note=REP319 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4268809 4269012 . - . ID=gene4138;Dbxref=EcoGene:EG14350,GeneID:5061529;Name=yjbS;gbkey=Gene;gene=yjbS;gene_biotype=protein_coding;gene_synonym=ECK4429;locus_tag=b4621 NC_000913.3 RefSeq CDS 4268809 4269012 . - 0 ID=cds3970;Parent=gene4138;Dbxref=UniProtKB/Swiss-Prot:P58036,Genbank:YP_001165333.1,EcoGene:EG14350,GeneID:5061529;Name=YP_001165333.1;gbkey=CDS;gene=yjbS;product=uncharacterized protein;protein_id=YP_001165333.1;transl_table=11 NC_000913.3 RefSeq gene 4269414 4270127 . + . ID=gene4139;Dbxref=EcoGene:EG11934,GeneID:948562;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;gene_synonym=ECK4047,hobH,JW4015,napA,yjbP;locus_tag=b4055 NC_000913.3 RefSeq CDS 4269414 4270127 . + 0 ID=cds3971;Parent=gene4139;Dbxref=ASAP:ABE-0013283,UniProtKB/Swiss-Prot:P0AE22,Genbank:NP_418479.1,EcoGene:EG11934,GeneID:948562;Name=NP_418479.1;Note=diadenosine tetraphosphatase;gbkey=CDS;gene=aphA;product=acid phosphatase/phosphotransferase%2C class B%2C non-specific;protein_id=NP_418479.1;transl_table=11 NC_000913.3 RefSeq gene 4270238 4270654 . + . ID=gene4140;Dbxref=EcoGene:EG11935,GeneID:948561;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;gene_synonym=ECK4048,JW4017;locus_tag=b4056 NC_000913.3 RefSeq CDS 4270238 4270654 . + 0 ID=cds3972;Parent=gene4140;Dbxref=ASAP:ABE-0013286,UniProtKB/Swiss-Prot:P0AF48,Genbank:NP_418480.1,EcoGene:EG11935,GeneID:948561;Name=NP_418480.1;gbkey=CDS;gene=yjbQ;product=thiamine phosphate synthase;protein_id=NP_418480.1;transl_table=11 NC_000913.3 RefSeq gene 4270658 4271014 . + . ID=gene4141;Dbxref=EcoGene:EG11936,GeneID:948560;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;gene_synonym=ECK4049,JW4018;locus_tag=b4057 NC_000913.3 RefSeq CDS 4270658 4271014 . + 0 ID=cds3973;Parent=gene4141;Dbxref=ASAP:ABE-0013288,UniProtKB/Swiss-Prot:P0AF50,Genbank:NP_418481.1,EcoGene:EG11936,GeneID:948560;Name=NP_418481.1;gbkey=CDS;gene=yjbR;product=DUF419 family protein;protein_id=NP_418481.1;transl_table=11 NC_000913.3 RefSeq gene 4271049 4273871 . - . ID=gene4142;Dbxref=EcoGene:EG11061,GeneID:948559;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;gene_synonym=dar,ECK4050,JW4019;locus_tag=b4058 NC_000913.3 RefSeq CDS 4271049 4273871 . - 0 ID=cds3974;Parent=gene4142;Dbxref=ASAP:ABE-0013290,UniProtKB/Swiss-Prot:P0A698,Genbank:NP_418482.1,EcoGene:EG11061,GeneID:948559;Name=NP_418482.1;Note=excision nuclease subunit A;gbkey=CDS;gene=uvrA;product=ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC;protein_id=NP_418482.1;transl_table=11 NC_000913.3 RefSeq gene 4274125 4274661 . + . ID=gene4143;Dbxref=EcoGene:EG10976,GeneID:948570;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;gene_synonym=ECK4051,exrB,JW4020,lexC;locus_tag=b4059 NC_000913.3 RefSeq CDS 4274125 4274661 . + 0 ID=cds3975;Parent=gene4143;Dbxref=ASAP:ABE-0013298,UniProtKB/Swiss-Prot:P0AGE0,Genbank:NP_418483.1,EcoGene:EG10976,GeneID:948570;Name=NP_418483.1;Note=ssDNA-binding protein;gbkey=CDS;gene=ssb;product=single-stranded DNA-binding protein;protein_id=NP_418483.1;transl_table=11 NC_000913.3 RefSeq gene 4274760 4275041 . - . ID=gene4144;Dbxref=EcoGene:EG11937,GeneID:948569;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;gene_synonym=ECK4052,JW5718;locus_tag=b4060 NC_000913.3 RefSeq CDS 4274760 4275041 . - 0 ID=cds3976;Parent=gene4144;Dbxref=ASAP:ABE-0013300,UniProtKB/Swiss-Prot:P32700,Genbank:NP_418484.4,EcoGene:EG11937,GeneID:948569;Name=NP_418484.4;gbkey=CDS;gene=yjcB;product=putative inner membrane protein;protein_id=NP_418484.4;transl_table=11 NC_000913.3 RefSeq gene 4275471 4277057 . + . ID=gene4145;Dbxref=EcoGene:EG11938,GeneID:948568;Name=yjcC;gbkey=Gene;gene=yjcC;gene_biotype=protein_coding;gene_synonym=ECK4053,JW4022;locus_tag=b4061 NC_000913.3 RefSeq CDS 4275471 4277057 . + 0 ID=cds3977;Parent=gene4145;Dbxref=ASAP:ABE-0013309,UniProtKB/Swiss-Prot:P32701,Genbank:NP_418485.1,EcoGene:EG11938,GeneID:948568;Name=NP_418485.1;gbkey=CDS;gene=yjcC;product=putative membrane-anchored cyclic-di-GMP phosphodiesterase;protein_id=NP_418485.1;transl_table=11 NC_000913.3 RefSeq gene 4277060 4277383 . - . ID=gene4146;Dbxref=EcoGene:EG10958,GeneID:948567;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;gene_synonym=ECK4054,JW4023;locus_tag=b4062 NC_000913.3 RefSeq CDS 4277060 4277383 . - 0 ID=cds3978;Parent=gene4146;Dbxref=ASAP:ABE-0013311,UniProtKB/Swiss-Prot:P0A9E2,Genbank:NP_418486.1,EcoGene:EG10958,GeneID:948567;Name=NP_418486.1;Note=regulation of superoxide response regulon;gbkey=CDS;gene=soxS;product=superoxide response regulon transcriptional activator%3B autoregulator;protein_id=NP_418486.1;transl_table=11 NC_000913.3 RefSeq gene 4277469 4277933 . + . ID=gene4147;Dbxref=EcoGene:EG10957,GeneID:948566;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;gene_synonym=ECK4055,JW4024,marC;locus_tag=b4063 NC_000913.3 RefSeq CDS 4277469 4277933 . + 0 ID=cds3979;Parent=gene4147;Dbxref=ASAP:ABE-0013316,UniProtKB/Swiss-Prot:P0ACS2,Genbank:NP_418487.1,EcoGene:EG10957,GeneID:948566;Name=NP_418487.1;Note=redox-sensing activator of soxS;gbkey=CDS;gene=soxR;product=redox-sensitive transcriptional activator of soxS%3B autorepressor;protein_id=NP_418487.1;transl_table=11 NC_000913.3 RefSeq gene 4277927 4278066 . - . ID=gene4148;Dbxref=EcoGene:EG31166,GeneID:2847753;Name=ryjA;gbkey=Gene;gene=ryjA;gene_biotype=ncRNA;gene_synonym=ECK4056,JWR0258,sraL;locus_tag=b4459 NC_000913.3 RefSeq ncRNA 4277927 4278066 . - . ID=rna167;Parent=gene4148;Dbxref=ASAP:ABE-0047277,EcoGene:EG31166,GeneID:2847753;Note=identified in a large scale screen;gbkey=ncRNA;gene=ryjA;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 4277927 4278066 . - . ID=id541;Parent=rna167;Dbxref=ASAP:ABE-0047277,EcoGene:EG31166,GeneID:2847753;Note=identified in a large scale screen;gbkey=ncRNA;gene=ryjA;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 4278479 4279828 . + . ID=gene4149;Dbxref=EcoGene:EG11939,GeneID:948565;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=ECK4057,JW4025,yjcD;locus_tag=b4064 NC_000913.3 RefSeq CDS 4278479 4279828 . + 0 ID=cds3980;Parent=gene4149;Dbxref=ASAP:ABE-0013319,UniProtKB/Swiss-Prot:P0AF52,Genbank:NP_418488.1,EcoGene:EG11939,GeneID:948565;Name=NP_418488.1;gbkey=CDS;gene=ghxP;product=guanine/hypoxanthine permease%2C high affinity%3B guanine/hypoxanthine:H+ symporter;protein_id=NP_418488.1;transl_table=11 NC_000913.3 RefSeq gene 4279980 4281629 . + . ID=gene4150;Dbxref=EcoGene:EG11940,GeneID:948577;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;gene_synonym=ECK4058,JW4026;locus_tag=b4065 NC_000913.3 RefSeq CDS 4279980 4281629 . + 0 ID=cds3981;Parent=gene4150;Dbxref=ASAP:ABE-0013323,UniProtKB/Swiss-Prot:P32703,Genbank:NP_418489.1,EcoGene:EG11940,GeneID:948577;Name=NP_418489.1;gbkey=CDS;gene=yjcE;product=putative cation/proton antiporter;protein_id=NP_418489.1;transl_table=11 NC_000913.3 RefSeq gene 4281783 4283075 . - . ID=gene4151;Dbxref=EcoGene:EG11941,GeneID:948576;Name=yjcF;gbkey=Gene;gene=yjcF;gene_biotype=protein_coding;gene_synonym=ECK4059,JW4027;locus_tag=b4066 NC_000913.3 RefSeq CDS 4281783 4283075 . - 0 ID=cds3982;Parent=gene4151;Dbxref=ASAP:ABE-0013325,UniProtKB/Swiss-Prot:P32704,Genbank:NP_418490.1,EcoGene:EG11941,GeneID:948576;Name=NP_418490.1;gbkey=CDS;gene=yjcF;product=pentapeptide repeats protein;protein_id=NP_418490.1;transl_table=11 NC_000913.3 RefSeq gene 4283253 4284902 . - . ID=gene4152;Dbxref=EcoGene:EG11942,GeneID:948575;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;gene_synonym=ECK4060,JW4028,yjcG;locus_tag=b4067 NC_000913.3 RefSeq CDS 4283253 4284902 . - 0 ID=cds3983;Parent=gene4152;Dbxref=ASAP:ABE-0013328,UniProtKB/Swiss-Prot:P32705,Genbank:NP_418491.1,EcoGene:EG11942,GeneID:948575;Name=NP_418491.1;Note=acetate permease~also transports glycolate with a rate high enough to support growth on this carbon source;gbkey=CDS;gene=actP;product=acetate transporter;protein_id=NP_418491.1;transl_table=11 NC_000913.3 RefSeq gene 4284899 4285213 . - . ID=gene4153;Dbxref=EcoGene:EG11943,GeneID:948574;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;gene_synonym=ECK4061,JW4029;locus_tag=b4068 NC_000913.3 RefSeq CDS 4284899 4285213 . - 0 ID=cds3984;Parent=gene4153;Dbxref=ASAP:ABE-0013330,UniProtKB/Swiss-Prot:P0AF54,Genbank:NP_418492.1,EcoGene:EG11943,GeneID:948574;Name=NP_418492.1;gbkey=CDS;gene=yjcH;product=DUF485 family inner membrane protein;protein_id=NP_418492.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4285302 4285378 . + . ID=id542;Note=REP320 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4285413 4287371 . - . ID=gene4154;Dbxref=EcoGene:EG11448,GeneID:948572;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;gene_synonym=acsA,ECK4062,JW4030,yfaC;locus_tag=b4069 NC_000913.3 RefSeq CDS 4285413 4287371 . - 0 ID=cds3985;Parent=gene4154;Dbxref=ASAP:ABE-0013337,UniProtKB/Swiss-Prot:P27550,Genbank:NP_418493.1,EcoGene:EG11448,GeneID:948572;Name=NP_418493.1;gbkey=CDS;gene=acs;product=acetyl-CoA synthetase;protein_id=NP_418493.1;transl_table=11 NC_000913.3 RefSeq gene 4287764 4289200 . + . ID=gene4155;Dbxref=EcoGene:EG11781,GeneID:948571;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;gene_synonym=ECK4063,JW4031;locus_tag=b4070 NC_000913.3 RefSeq CDS 4287764 4289200 . + 0 ID=cds3986;Parent=gene4155;Dbxref=ASAP:ABE-0013342,UniProtKB/Swiss-Prot:P0ABK9,Genbank:NP_418494.1,EcoGene:EG11781,GeneID:948571;Name=NP_418494.1;Note=periplasmic cytochrome c(552): plays a role in nitrite reduction;gbkey=CDS;gene=nrfA;product=nitrite reductase%2C formate-dependent%2C cytochrome;protein_id=NP_418494.1;transl_table=11 NC_000913.3 RefSeq gene 4289245 4289811 . + . ID=gene4156;Dbxref=EcoGene:EG11945,GeneID:948573;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;gene_synonym=ECK4064,JW4032,yjcI;locus_tag=b4071 NC_000913.3 RefSeq CDS 4289245 4289811 . + 0 ID=cds3987;Parent=gene4156;Dbxref=ASAP:ABE-0013344,UniProtKB/Swiss-Prot:P0ABL1,Genbank:NP_418495.2,EcoGene:EG11945,GeneID:948573;Name=NP_418495.2;Note=formate-dependent nitrite reductase%3B a penta-haeme cytochrome c;gbkey=CDS;gene=nrfB;product=nitrite reductase%2C formate-dependent%2C penta-heme cytochrome c;protein_id=NP_418495.2;transl_table=11 NC_000913.3 RefSeq gene 4289808 4290479 . + . ID=gene4157;Dbxref=EcoGene:EG11946,GeneID:948581;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;gene_synonym=ECK4065,JW4033,yjcJ;locus_tag=b4072 NC_000913.3 RefSeq CDS 4289808 4290479 . + 0 ID=cds3988;Parent=gene4157;Dbxref=ASAP:ABE-0013346,UniProtKB/Swiss-Prot:P0AAK7,Genbank:NP_418496.1,EcoGene:EG11946,GeneID:948581;Name=NP_418496.1;Note=formate-dependent nitrite reductase%3B Fe-S centers;gbkey=CDS;gene=nrfC;product=formate-dependent nitrite reductase%2C 4Fe4S subunit;protein_id=NP_418496.1;transl_table=11 NC_000913.3 RefSeq gene 4290476 4291432 . + . ID=gene4158;Dbxref=EcoGene:EG11947,GeneID:948580;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;gene_synonym=ECK4066,JW4034,yjcK;locus_tag=b4073 NC_000913.3 RefSeq CDS 4290476 4291432 . + 0 ID=cds3989;Parent=gene4158;Dbxref=ASAP:ABE-0013348,UniProtKB/Swiss-Prot:P32709,Genbank:NP_418497.1,EcoGene:EG11947,GeneID:948580;Name=NP_418497.1;Note=formate-dependent nitrate reductase complex%3B transmembrane protein;gbkey=CDS;gene=nrfD;product=formate-dependent nitrite reductase%2C membrane subunit;protein_id=NP_418497.1;transl_table=11 NC_000913.3 RefSeq gene 4291512 4293170 . + . ID=gene4159;Dbxref=EcoGene:EG11948,GeneID:948579;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;gene_synonym=ECK4067,JW4035,yjcL;locus_tag=b4074 NC_000913.3 RefSeq CDS 4291512 4293170 . + 0 ID=cds3990;Parent=gene4159;Dbxref=ASAP:ABE-0013350,UniProtKB/Swiss-Prot:P32710,Genbank:NP_418498.1,EcoGene:EG11948,GeneID:948579;Name=NP_418498.1;Note=formate-dependent nitrite reductase%3B possible assembly function;gbkey=CDS;gene=nrfE;product=heme lyase (NrfEFG) for insertion of heme into c552%2C subunit NrfE;protein_id=NP_418498.1;transl_table=11 NC_000913.3 RefSeq gene 4293163 4293546 . + . ID=gene4160;Dbxref=EcoGene:EG11949,GeneID:948578;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;gene_synonym=ECK4068,JW4036,yjcM;locus_tag=b4075 NC_000913.3 RefSeq CDS 4293163 4293546 . + 0 ID=cds3991;Parent=gene4160;Dbxref=ASAP:ABE-0013352,UniProtKB/Swiss-Prot:P32711,Genbank:NP_418499.1,EcoGene:EG11949,GeneID:948578;Name=NP_418499.1;Note=part of formate-dependent nitrite reductase complex;gbkey=CDS;gene=nrfF;product=heme lyase (NrfEFG) for insertion of heme into c552%2C subunit NrfF;protein_id=NP_418499.1;transl_table=11 NC_000913.3 RefSeq gene 4293543 4294139 . + . ID=gene4161;Dbxref=EcoGene:EG11950,GeneID:948592;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;gene_synonym=aidC,ECK4069,JW4037,yjcN;locus_tag=b4076 NC_000913.3 RefSeq CDS 4293543 4294139 . + 0 ID=cds3992;Parent=gene4161;Dbxref=ASAP:ABE-0013354,UniProtKB/Swiss-Prot:P32712,Genbank:NP_418500.1,EcoGene:EG11950,GeneID:948592;Name=NP_418500.1;Note=part of formate-dependent nitrite reductase complex;gbkey=CDS;gene=nrfG;product=heme lyase (NrfEFG) for insertion of heme into c552%2C subunit NrfG;protein_id=NP_418500.1;transl_table=11 NC_000913.3 RefSeq gene 4294481 4295794 . + . ID=gene4162;Dbxref=EcoGene:EG10405,GeneID:948591;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;gene_synonym=ECK4070,JW4038;locus_tag=b4077 NC_000913.3 RefSeq CDS 4294481 4295794 . + 0 ID=cds3993;Parent=gene4162;Dbxref=ASAP:ABE-0013357,UniProtKB/Swiss-Prot:P21345,Genbank:NP_418501.1,EcoGene:EG10405,GeneID:948591;Name=NP_418501.1;Note=glutamate-aspartate symport protein;gbkey=CDS;gene=gltP;product=glutamate/aspartate:proton symporter;protein_id=NP_418501.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4295835 4296434 . + . ID=id543;Note=RIP321 (repetitive extragenic palindromic) element%3B contains 11 REP sequences and 4 IHF sites;gbkey=repeat_region NC_000913.3 RefSeq gene 4296436 4297125 . - . ID=gene4163;Dbxref=EcoGene:EG11951,GeneID:948586;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;gene_synonym=ECK4071,JW4039;locus_tag=b4078 NC_000913.3 RefSeq CDS 4296436 4297125 . - 0 ID=cds3994;Parent=gene4163;Dbxref=ASAP:ABE-0013360,UniProtKB/Swiss-Prot:P0AF56,Genbank:NP_418502.1,EcoGene:EG11951,GeneID:948586;Name=NP_418502.1;gbkey=CDS;gene=yjcO;product=Sel1 family TPR-like repeat protein;protein_id=NP_418502.1;transl_table=11 NC_000913.3 RefSeq gene 4297219 4299366 . - . ID=gene4164;Dbxref=EcoGene:EG10285,GeneID:948584;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;gene_synonym=ECK4072,JW4040;locus_tag=b4079 NC_000913.3 RefSeq CDS 4297219 4299366 . - 0 ID=cds3995;Parent=gene4164;Dbxref=ASAP:ABE-0013363,UniProtKB/Swiss-Prot:P07658,Genbank:NP_418503.1,EcoGene:EG10285,GeneID:948584;Name=NP_418503.1;Note=selenopolypeptide subunit of formate dehydrogenase H;gbkey=CDS;gene=fdhF;product=formate dehydrogenase-H%2C selenopolypeptide subunit;protein_id=NP_418503.1;transl_except=(pos:complement(4298947..4298949)%2Caa:Sec);transl_table=11 NC_000913.3 RefSeq gene 4299564 4301030 . - . ID=gene4165;Dbxref=EcoGene:EG11952,GeneID:948583;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;gene_synonym=ECK4073,JW4041,sdsP,yjcP;locus_tag=b4080 NC_000913.3 RefSeq CDS 4299564 4301030 . - 0 ID=cds3996;Parent=gene4165;Dbxref=ASAP:ABE-0013366,UniProtKB/Swiss-Prot:P32714,Genbank:NP_418504.1,EcoGene:EG11952,GeneID:948583;Name=NP_418504.1;Note=putative enzyme;gbkey=CDS;gene=mdtP;product=outer membrane factor of efflux pump;protein_id=NP_418504.1;transl_table=11 NC_000913.3 RefSeq gene 4301027 4303078 . - . ID=gene4166;Dbxref=EcoGene:EG11953,GeneID:948582;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;gene_synonym=ECK4074,JW4042,sdsQ,yjcQ;locus_tag=b4081 NC_000913.3 RefSeq CDS 4301027 4303078 . - 0 ID=cds3997;Parent=gene4166;Dbxref=ASAP:ABE-0013368,UniProtKB/Swiss-Prot:P32715,Genbank:NP_418505.2,EcoGene:EG11953,GeneID:948582;Name=NP_418505.2;Note=putative enzyme;gbkey=CDS;gene=mdtO;product=membrane translocase (MDR) of MdtNOP efflux pump%2C PET family;protein_id=NP_418505.2;transl_table=11 NC_000913.3 RefSeq gene 4303078 4304109 . - . ID=gene4167;Dbxref=EcoGene:EG11954,GeneID:948598;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;gene_synonym=ECK4075,JW4043,sdsR,yjcR;locus_tag=b4082 NC_000913.3 RefSeq CDS 4303078 4304109 . - 0 ID=cds3998;Parent=gene4167;Dbxref=ASAP:ABE-0013373,UniProtKB/Swiss-Prot:P32716,Genbank:NP_418506.1,EcoGene:EG11954,GeneID:948598;Name=NP_418506.1;Note=putative membrane protein;gbkey=CDS;gene=mdtN;product=membrane fusion protein of efflux pump;protein_id=NP_418506.1;transl_table=11 NC_000913.3 RefSeq gene 4304128 4304403 . - . ID=gene4168;Dbxref=EcoGene:EG14401,GeneID:5061530;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;gene_synonym=ECK4430;locus_tag=b4622 NC_000913.3 RefSeq CDS 4304128 4304403 . - 0 ID=cds3999;Parent=gene4168;Dbxref=UniProtKB/Swiss-Prot:A5A630,Genbank:YP_001165334.1,EcoGene:EG14401,GeneID:5061530;Name=YP_001165334.1;gbkey=CDS;gene=ytcA;product=putative inner membrane efflux pump-associated DUF1656 family protein;protein_id=YP_001165334.1;transl_table=11 NC_000913.3 RefSeq gene 4304612 4306597 . - . ID=gene4169;Dbxref=EcoGene:EG11955,GeneID:948597;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;gene_synonym=ECK4076,JW5721;locus_tag=b4083 NC_000913.3 RefSeq CDS 4304612 4306597 . - 0 ID=cds4000;Parent=gene4169;Dbxref=ASAP:ABE-0013377,UniProtKB/Swiss-Prot:P32717,Genbank:NP_418507.2,EcoGene:EG11955,GeneID:948597;Name=NP_418507.2;gbkey=CDS;gene=yjcS;product=metallo-beta-lactamase superfamily protein;protein_id=NP_418507.2;transl_table=11 NC_000913.3 RefSeq gene 4306870 4307799 . - . ID=gene4170;Dbxref=EcoGene:EG11956,GeneID:948596;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;gene_synonym=ECK4077,JW5724,yjcT;locus_tag=b4084 NC_000913.3 RefSeq CDS 4306870 4307799 . - 0 ID=cds4001;Parent=gene4170;Dbxref=ASAP:ABE-0013380,UniProtKB/Swiss-Prot:P32718,Genbank:NP_418508.1,EcoGene:EG11956,GeneID:948596;Name=NP_418508.1;gbkey=CDS;gene=alsK;product=D-allose kinase;protein_id=NP_418508.1;transl_table=11 NC_000913.3 RefSeq gene 4307783 4308478 . - . ID=gene4171;Dbxref=EcoGene:EG11957,GeneID:948595;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;gene_synonym=ECK4078,JW4046,yjcU;locus_tag=b4085 NC_000913.3 RefSeq CDS 4307783 4308478 . - 0 ID=cds4002;Parent=gene4171;Dbxref=ASAP:ABE-0013382,UniProtKB/Swiss-Prot:P32719,Genbank:NP_418509.1,EcoGene:EG11957,GeneID:948595;Name=NP_418509.1;gbkey=CDS;gene=alsE;product=allulose-6-phosphate 3-epimerase;protein_id=NP_418509.1;transl_table=11 NC_000913.3 RefSeq gene 4308489 4309469 . - . ID=gene4172;Dbxref=EcoGene:EG11958,GeneID:948594;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;gene_synonym=ECK4079,JW4047,yjcV;locus_tag=b4086 NC_000913.3 RefSeq CDS 4308489 4309469 . - 0 ID=cds4003;Parent=gene4172;Dbxref=ASAP:ABE-0013392,UniProtKB/Swiss-Prot:P32720,Genbank:NP_418510.1,EcoGene:EG11958,GeneID:948594;Name=NP_418510.1;Note=membrane component of ABC superfamily;gbkey=CDS;gene=alsC;product=D-allose ABC transporter permease;protein_id=NP_418510.1;transl_table=11 NC_000913.3 RefSeq gene 4309448 4310980 . - . ID=gene4173;Dbxref=EcoGene:EG11959,GeneID:948593;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;gene_synonym=ECK4080,JW4048,yjcW;locus_tag=b4087 NC_000913.3 RefSeq CDS 4309448 4310980 . - 0 ID=cds4004;Parent=gene4173;Dbxref=ASAP:ABE-0013394,UniProtKB/Swiss-Prot:P32721,Genbank:NP_418511.1,EcoGene:EG11959,GeneID:948593;Name=NP_418511.1;gbkey=CDS;gene=alsA;product=D-allose ABC transporter ATPase;protein_id=NP_418511.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4311014 4311095 . + . ID=id544;Note=REP322 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4311107 4312042 . - . ID=gene4174;Dbxref=EcoGene:EG12458,GeneID:948604;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;gene_synonym=ECK4081,JW4049,yjcX;locus_tag=b4088 NC_000913.3 RefSeq CDS 4311107 4312042 . - 0 ID=cds4005;Parent=gene4174;Dbxref=ASAP:ABE-0013398,UniProtKB/Swiss-Prot:P39265,Genbank:NP_418512.1,EcoGene:EG12458,GeneID:948604;Name=NP_418512.1;Note=periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=alsB;product=D-allose ABC transporter periplasmic binding protein;protein_id=NP_418512.1;transl_table=11 NC_000913.3 RefSeq gene 4312101 4312991 . - . ID=gene4175;Dbxref=EcoGene:EG12459,GeneID:948603;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;gene_synonym=ECK4082,JW4050,rpiR,yjcY;locus_tag=b4089 NC_000913.3 RefSeq CDS 4312101 4312991 . - 0 ID=cds4006;Parent=gene4175;Dbxref=ASAP:ABE-0013400,UniProtKB/Swiss-Prot:P0ACS7,Genbank:NP_418513.4,EcoGene:EG12459,GeneID:948603;Name=NP_418513.4;Note=transcriptional repressor of rpiB expression;gbkey=CDS;gene=alsR;product=d-allose-inducible als operon transcriptional repressor%3B autorepressor%3B repressor of rpiR;protein_id=NP_418513.4;transl_table=11 NC_000913.3 RefSeq gene 4313350 4313799 . + . ID=gene4176;Dbxref=EcoGene:EG11827,GeneID:948602;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsB,alsI,ECK4083,JW4051,yjcA;locus_tag=b4090 NC_000913.3 RefSeq CDS 4313350 4313799 . + 0 ID=cds4007;Parent=gene4176;Dbxref=ASAP:ABE-0013405,UniProtKB/Swiss-Prot:P37351,Genbank:NP_418514.1,EcoGene:EG11827,GeneID:948602;Name=NP_418514.1;Note=ribose 5-phosphate isomerase B;gbkey=CDS;gene=rpiB;product=ribose 5-phosphate isomerase B/allose 6-phosphate isomerase;protein_id=NP_418514.1;transl_table=11 NC_000913.3 RefSeq gene 4313868 4314197 . + . ID=gene4177;Dbxref=EcoGene:EG14407,GeneID:2847754;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;gene_synonym=ECK4084,JW5890;locus_tag=b4487 NC_000913.3 RefSeq CDS 4313868 4314197 . + 0 ID=cds4008;Parent=gene4177;Dbxref=ASAP:ABE-0174120,UniProtKB/Swiss-Prot:Q6BEX5,Genbank:YP_026281.1,EcoGene:EG14407,GeneID:2847754;Name=YP_026281.1;Note=conserved hypothetical protein~conserved in EDL933 and CFT073%3B on opposite strand of the now deaccessioned phnQ (b4091);gbkey=CDS;gene=yjdP;product=putative periplasmic protein;protein_id=YP_026281.1;transl_table=11 NC_000913.3 RefSeq gene 4314344 4315102 . - . ID=gene4178;Dbxref=EcoGene:EG10725,GeneID:948600;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;gene_synonym=ECK4085,JW4053;locus_tag=b4092 NC_000913.3 RefSeq CDS 4314344 4315102 . - 0 ID=cds4009;Parent=gene4178;Dbxref=ASAP:ABE-0013412,UniProtKB/Swiss-Prot:P16692,Genbank:NP_418516.1,EcoGene:EG10725,GeneID:948600;Name=NP_418516.1;Note=phosphonate metabolism;gbkey=CDS;gene=phnP;product=5-phospho-alpha-D-ribosyl 1%2C2-cyclic phosphate phosphodiesterase;protein_id=NP_418516.1;transl_table=11 NC_000913.3 RefSeq gene 4315104 4315538 . - . ID=gene4179;Dbxref=EcoGene:EG10724,GeneID:948599;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;gene_synonym=ECK4086,JW4054;locus_tag=b4093 NC_000913.3 RefSeq CDS 4315104 4315538 . - 0 ID=cds4010;Parent=gene4179;Dbxref=ASAP:ABE-0013415,UniProtKB/Swiss-Prot:P16691,Genbank:NP_418517.1,EcoGene:EG10724,GeneID:948599;Name=NP_418517.1;Note=putative regulator%2C phn operon;gbkey=CDS;gene=phnO;product=aminoalkylphosphonate N-acetyltransferase;protein_id=NP_418517.1;transl_table=11 NC_000913.3 RefSeq gene 4315525 4316082 . - . ID=gene4180;Dbxref=EcoGene:EG10723,GeneID:948608;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;gene_synonym=ECK4087,JW4055;locus_tag=b4094 NC_000913.3 RefSeq CDS 4315525 4316082 . - 0 ID=cds4011;Parent=gene4180;Dbxref=ASAP:ABE-0013417,UniProtKB/Swiss-Prot:P16690,Genbank:NP_418518.1,EcoGene:EG10723,GeneID:948608;Name=NP_418518.1;Note=ATP-binding component of phosphonate transport;gbkey=CDS;gene=phnN;product=ribose 1%2C5-bisphosphokinase;protein_id=NP_418518.1;transl_table=11 NC_000913.3 RefSeq gene 4316082 4317218 . - . ID=gene4181;Dbxref=EcoGene:EG10722,GeneID:948613;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;gene_synonym=ECK4088,JW4056;locus_tag=b4095 NC_000913.3 RefSeq CDS 4316082 4317218 . - 0 ID=cds4012;Parent=gene4181;Dbxref=ASAP:ABE-0013419,UniProtKB/Swiss-Prot:P16689,Genbank:NP_418519.1,EcoGene:EG10722,GeneID:948613;Name=NP_418519.1;Note=phosphonate metabolism;gbkey=CDS;gene=phnM;product=ribophosphonate triphosphate hydrolase;protein_id=NP_418519.1;transl_table=11 NC_000913.3 RefSeq gene 4317215 4317895 . - . ID=gene4182;Dbxref=EcoGene:EG10721,GeneID:948612;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;gene_synonym=ECK4089,JW4057;locus_tag=b4096 NC_000913.3 RefSeq CDS 4317215 4317895 . - 0 ID=cds4013;Parent=gene4182;Dbxref=ASAP:ABE-0013421,UniProtKB/Swiss-Prot:P16679,Genbank:NP_418520.1,EcoGene:EG10721,GeneID:948612;Name=NP_418520.1;Note=ATP-binding component of phosphonate transport;gbkey=CDS;gene=phnL;product=ribophosphonate triphosphate synthase subunit%3B putative ABC transporter-related ATPase;protein_id=NP_418520.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4317917 4317999 . + . ID=id545;Note=REP323 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4318006 4318764 . - . ID=gene4183;Dbxref=EcoGene:EG10720,GeneID:948611;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;gene_synonym=ECK4090,JW5727;locus_tag=b4097 NC_000913.3 RefSeq CDS 4318006 4318764 . - 0 ID=cds4014;Parent=gene4183;Dbxref=ASAP:ABE-0013424,UniProtKB/Swiss-Prot:P16678,Genbank:YP_026282.1,EcoGene:EG10720,GeneID:948611;Name=YP_026282.1;Note=ATP-binding component of phosphonate transport;gbkey=CDS;gene=phnK;product=carbon-phosphorus lyase complex subunit%2C putative ATP transporter ATP-binding protein;protein_id=YP_026282.1;transl_table=11 NC_000913.3 RefSeq gene 4318761 4319606 . - . ID=gene4184;Dbxref=EcoGene:EG10719,GeneID:948606;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;gene_synonym=ECK4091,JW4059;locus_tag=b4098 NC_000913.3 RefSeq CDS 4318761 4319606 . - 0 ID=cds4015;Parent=gene4184;Dbxref=ASAP:ABE-0013426,UniProtKB/Swiss-Prot:P16688,Genbank:NP_418522.1,EcoGene:EG10719,GeneID:948606;Name=NP_418522.1;Note=phosphonate metabolism;gbkey=CDS;gene=phnJ;product=carbon-phosphorus lyase%2C SAM-dependent;protein_id=NP_418522.1;transl_table=11 NC_000913.3 RefSeq gene 4319599 4320663 . - . ID=gene4185;Dbxref=EcoGene:EG10718,GeneID:948605;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;gene_synonym=ECK4092,JW4060;locus_tag=b4099 NC_000913.3 RefSeq CDS 4319599 4320663 . - 0 ID=cds4016;Parent=gene4185;Dbxref=ASAP:ABE-0013428,UniProtKB/Swiss-Prot:P16687,Genbank:NP_418523.1,EcoGene:EG10718,GeneID:948605;Name=NP_418523.1;Note=phosphonate metabolism;gbkey=CDS;gene=phnI;product=ribophosphonate triphosphate synthase complex putative catalytic subunit;protein_id=NP_418523.1;transl_table=11 NC_000913.3 RefSeq gene 4320663 4321247 . - . ID=gene4186;Dbxref=EcoGene:EG10717,GeneID:948619;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;gene_synonym=ECK4093,JW4061;locus_tag=b4100 NC_000913.3 RefSeq CDS 4320663 4321247 . - 0 ID=cds4017;Parent=gene4186;Dbxref=ASAP:ABE-0013430,UniProtKB/Swiss-Prot:P16686,Genbank:NP_418524.1,EcoGene:EG10717,GeneID:948619;Name=NP_418524.1;Note=phosphonate metabolism;gbkey=CDS;gene=phnH;product=ribophosphonate triphosphate synthase subunit;protein_id=NP_418524.1;transl_table=11 NC_000913.3 RefSeq gene 4321244 4321696 . - . ID=gene4187;Dbxref=EcoGene:EG10716,GeneID:948618;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;gene_synonym=ECK4094,JW4062;locus_tag=b4101 NC_000913.3 RefSeq CDS 4321244 4321696 . - 0 ID=cds4018;Parent=gene4187;Dbxref=ASAP:ABE-0013433,UniProtKB/Swiss-Prot:P16685,Genbank:NP_418525.1,EcoGene:EG10716,GeneID:948618;Name=NP_418525.1;Note=phosphonate metabolism;gbkey=CDS;gene=phnG;product=ribophosphonate triphosphate synthase subunit;protein_id=NP_418525.1;transl_table=11 NC_000913.3 RefSeq gene 4321697 4322422 . - . ID=gene4188;Dbxref=EcoGene:EG10715,GeneID:948617;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;gene_synonym=ECK4095,JW4063;locus_tag=b4102 NC_000913.3 RefSeq CDS 4321697 4322422 . - 0 ID=cds4019;Parent=gene4188;Dbxref=ASAP:ABE-0013435,UniProtKB/Swiss-Prot:P16684,Genbank:NP_418526.1,EcoGene:EG10715,GeneID:948617;Name=NP_418526.1;Note=putative transcriptional regulator;gbkey=CDS;gene=phnF;product=putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation;protein_id=NP_418526.1;transl_table=11 NC_000913.3 RefSeq gene 4322443 4323230 . - . ID=gene4189;Dbxref=EcoGene:EG11283,GeneID:948625;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=pseudogene;gene_synonym=ECK4096,JW4064;locus_tag=b4104;pseudo=true NC_000913.3 RefSeq CDS 4322805 4323230 . - 0 ID=cds4020;Parent=gene4189;Dbxref=ASAP:ABE-0013437,ASAP:ABE-0013439,UniProtKB/Swiss-Prot:P16683,EcoGene:EG11283,GeneID:948625;Note=defective phosphonate ABC transporter permease%3Btransport%3B Transport of small molecules: Anions~membrane channel protein component of Pn transporter%3B membrane component of ABC superfamily;gbkey=CDS;gene=phnE;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4322443 4322814 . - 0 ID=cds4020;Parent=gene4189;Dbxref=ASAP:ABE-0013437,ASAP:ABE-0013439,UniProtKB/Swiss-Prot:P16683,EcoGene:EG11283,GeneID:948625;Note=defective phosphonate ABC transporter permease%3Btransport%3B Transport of small molecules: Anions~membrane channel protein component of Pn transporter%3B membrane component of ABC superfamily;gbkey=CDS;gene=phnE;pseudo=true;transl_table=11 NC_000913.3 RefSeq repeat_region 4323246 4323332 . + . ID=id546;Note=REP324 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4323336 4324352 . - . ID=gene4190;Dbxref=EcoGene:EG10714,GeneID:948624;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;gene_synonym=ECK4098,JW4066,psiD;locus_tag=b4105 NC_000913.3 RefSeq CDS 4323336 4324352 . - 0 ID=cds4021;Parent=gene4190;Dbxref=ASAP:ABE-0013442,UniProtKB/Swiss-Prot:P16682,Genbank:NP_418529.1,EcoGene:EG10714,GeneID:948624;Name=NP_418529.1;Note=periplasmic binding protein component of Pn transporter%3B periplasmic binding component of ABC superfamily;gbkey=CDS;gene=phnD;product=phosphonate ABC transporter periplasmic binding protein;protein_id=NP_418529.1;transl_table=11 NC_000913.3 RefSeq gene 4324377 4325165 . - . ID=gene4191;Dbxref=EcoGene:EG10713,GeneID:948623;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;gene_synonym=ECK4099,JW4067;locus_tag=b4106 NC_000913.3 RefSeq CDS 4324377 4325165 . - 0 ID=cds4022;Parent=gene4191;Dbxref=ASAP:ABE-0013444,UniProtKB/Swiss-Prot:P16677,Genbank:NP_418530.1,EcoGene:EG10713,GeneID:948623;Name=NP_418530.1;Note=ATP-binding component of phosphonate transport%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=phnC;product=phosphonate ABC transporter ATPase;protein_id=NP_418530.1;transl_table=11 NC_000913.3 RefSeq gene 4325298 4325741 . - . ID=gene4192;Dbxref=EcoGene:EG10712,GeneID:948622;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;gene_synonym=ECK4100,JW4068,phnB;locus_tag=b4107 NC_000913.3 RefSeq CDS 4325298 4325741 . - 0 ID=cds4023;Parent=gene4192;Dbxref=ASAP:ABE-0013447,UniProtKB/Swiss-Prot:P16681,Genbank:NP_418531.1,EcoGene:EG10712,GeneID:948622;Name=NP_418531.1;gbkey=CDS;gene=yjdN;product=metalloprotein superfamily protein;protein_id=NP_418531.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4325802 4326384 . + . ID=id547;Note=REP325 (repetitive extragenic palindromic) element%3B contains 12 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4326399 4326734 . - . ID=gene4193;Dbxref=EcoGene:EG10711,GeneID:948621;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;gene_synonym=ECK4101,JW4069,phnA;locus_tag=b4108 NC_000913.3 RefSeq CDS 4326399 4326734 . - 0 ID=cds4024;Parent=gene4193;Dbxref=ASAP:ABE-0013451,UniProtKB/Swiss-Prot:P0AFJ1,Genbank:NP_418532.1,EcoGene:EG10711,GeneID:948621;Name=NP_418532.1;gbkey=CDS;gene=yjdM;product=zinc-ribbon family protein;protein_id=NP_418532.1;transl_table=11 NC_000913.3 RefSeq gene 4327135 4329363 . + . ID=gene4194;Dbxref=EcoGene:EG11210,GeneID:948620;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;gene_synonym=ECK4102,JW4070,yjdA;locus_tag=b4109 NC_000913.3 RefSeq CDS 4327135 4329363 . + 0 ID=cds4025;Parent=gene4194;Dbxref=ASAP:ABE-0013456,UniProtKB/Swiss-Prot:P16694,Genbank:NP_418533.1,EcoGene:EG11210,GeneID:948620;Name=NP_418533.1;Note=putative vimentin;gbkey=CDS;gene=crfC;product=clamp-binding sister replication fork colocalization protein%2C dynamin-related;protein_id=NP_418533.1;transl_table=11 NC_000913.3 RefSeq gene 4329360 4330238 . + . ID=gene4195;Dbxref=EcoGene:EG12460,GeneID:948633;Name=yjcZ;gbkey=Gene;gene=yjcZ;gene_biotype=protein_coding;gene_synonym=ECK4103,JW5729;locus_tag=b4110 NC_000913.3 RefSeq CDS 4329360 4330238 . + 0 ID=cds4026;Parent=gene4195;Dbxref=ASAP:ABE-0013459,UniProtKB/Swiss-Prot:P39267,Genbank:NP_418534.4,EcoGene:EG12460,GeneID:948633;Name=NP_418534.4;gbkey=CDS;gene=yjcZ;product=YjcZ family protein%3B yhjH motility defect suppressor;protein_id=NP_418534.4;transl_table=11 NC_000913.3 RefSeq gene 4330502 4332004 . + . ID=gene4196;Dbxref=EcoGene:EG11612,GeneID:948626;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;gene_synonym=ECK4104,JW4072;locus_tag=b4111 NC_000913.3 RefSeq CDS 4330502 4332004 . + 0 ID=cds4027;Parent=gene4196;Dbxref=ASAP:ABE-0013462,UniProtKB/Swiss-Prot:P0C0L7,Genbank:NP_418535.1,EcoGene:EG11612,GeneID:948626;Name=NP_418535.1;Note=low-affinity transport system%3B proline permease II;gbkey=CDS;gene=proP;product=proline/glycine betaine transporter;protein_id=NP_418535.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4332014 4332045 . + . ID=id548;Note=REP326 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4332116 4332205 . + . ID=gene4197;Dbxref=EcoGene:EG14499,GeneID:11115379;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;gene_synonym=ECK4515;locus_tag=b4703 NC_000913.3 RefSeq CDS 4332116 4332205 . + 0 ID=cds4028;Parent=gene4197;Dbxref=UniProtKB/Swiss-Prot:G3MTW7,Genbank:YP_004831120.1,EcoGene:EG14499,GeneID:11115379;Name=YP_004831120.1;gbkey=CDS;gene=pmrR;product=putative membrane-bound BasS regulator;protein_id=YP_004831120.1;transl_table=11 NC_000913.3 RefSeq gene 4332181 4333272 . - . ID=gene4198;Dbxref=EcoGene:EG11614,GeneID:948632;Name=basS;gbkey=Gene;gene=basS;gene_biotype=protein_coding;gene_synonym=ECK4105,JW4073,pmrB;locus_tag=b4112 NC_000913.3 RefSeq CDS 4332181 4333272 . - 0 ID=cds4029;Parent=gene4198;Dbxref=ASAP:ABE-0013464,UniProtKB/Swiss-Prot:P30844,Genbank:NP_418536.1,EcoGene:EG11614,GeneID:948632;Name=NP_418536.1;Note=sensor protein for basR;gbkey=CDS;gene=basS;product=sensory histidine kinase in two-component regulatory system with BasR;protein_id=NP_418536.1;transl_table=11 NC_000913.3 RefSeq gene 4333282 4333950 . - . ID=gene4199;Dbxref=EcoGene:EG11615,GeneID:948631;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;gene_synonym=ECK4106,JW4074,pmrA;locus_tag=b4113 NC_000913.3 RefSeq CDS 4333282 4333950 . - 0 ID=cds4030;Parent=gene4199;Dbxref=ASAP:ABE-0013466,UniProtKB/Swiss-Prot:P30843,Genbank:NP_418537.1,EcoGene:EG11615,GeneID:948631;Name=NP_418537.1;Note=transcriptional regulatory protein%2C member of 2-component regulatory system;gbkey=CDS;gene=basR;product=response regulator in two-component regulatory system with BasS;protein_id=NP_418537.1;transl_table=11 NC_000913.3 RefSeq gene 4333947 4335590 . - . ID=gene4200;Dbxref=EcoGene:EG11613,GeneID:948629;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;gene_synonym=ECK4107,JW5730,pagB,pmrC,yjdB;locus_tag=b4114 NC_000913.3 RefSeq CDS 4333947 4335590 . - 0 ID=cds4031;Parent=gene4200;Dbxref=ASAP:ABE-0013469,UniProtKB/Swiss-Prot:P30845,Genbank:NP_418538.2,EcoGene:EG11613,GeneID:948629;Name=NP_418538.2;gbkey=CDS;gene=eptA;product=lipid A phosphoethanolamine transferase;protein_id=NP_418538.2;transl_table=11 NC_000913.3 RefSeq gene 4335694 4337031 . - . ID=gene4201;Dbxref=EcoGene:EG12462,GeneID:948628;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;gene_synonym=aniC,ECK4108,JW4076,yjdD,yjdE;locus_tag=b4115 NC_000913.3 RefSeq CDS 4335694 4337031 . - 0 ID=cds4032;Parent=gene4201;Dbxref=ASAP:ABE-0013473,UniProtKB/Swiss-Prot:P60061,Genbank:NP_418539.1,EcoGene:EG12462,GeneID:948628;Name=NP_418539.1;Note=putative amino acid/amine transport protein%2C cryptic;gbkey=CDS;gene=adiC;product=arginine:agmatine antiporter;protein_id=NP_418539.1;transl_table=11 NC_000913.3 RefSeq gene 4337168 4337929 . - . ID=gene4202;Dbxref=EcoGene:EG11966,GeneID:948627;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;gene_synonym=ECK4109,JW4077;locus_tag=b4116 NC_000913.3 RefSeq CDS 4337168 4337929 . - 0 ID=cds4033;Parent=gene4202;Dbxref=ASAP:ABE-0013479,UniProtKB/Swiss-Prot:P33234,Genbank:NP_418540.1,EcoGene:EG11966,GeneID:948627;Name=NP_418540.1;Note=putative ARAC-type regulatory protein;gbkey=CDS;gene=adiY;product=adi system transcriptional activator;protein_id=NP_418540.1;transl_table=11 NC_000913.3 RefSeq gene 4338254 4340521 . - . ID=gene4203;Dbxref=EcoGene:EG11501,GeneID:948638;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;gene_synonym=adi,ECK4110,JW5731;locus_tag=b4117 NC_000913.3 RefSeq CDS 4338254 4340521 . - 0 ID=cds4034;Parent=gene4203;Dbxref=ASAP:ABE-0013483,UniProtKB/Swiss-Prot:P28629,Genbank:NP_418541.2,EcoGene:EG11501,GeneID:948638;Name=NP_418541.2;gbkey=CDS;gene=adiA;product=arginine decarboxylase;protein_id=NP_418541.2;transl_table=11 NC_000913.3 RefSeq gene 4340720 4341628 . - . ID=gene4204;Dbxref=EcoGene:EG11230,GeneID:948637;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;gene_synonym=ECK4111,JW4079;locus_tag=b4118 NC_000913.3 RefSeq CDS 4340720 4341628 . - 0 ID=cds4035;Parent=gene4204;Dbxref=ASAP:ABE-0013486,UniProtKB/Swiss-Prot:P0ACH8,Genbank:NP_418542.1,EcoGene:EG11230,GeneID:948637;Name=NP_418542.1;Note=regulator of melibiose operon;gbkey=CDS;gene=melR;product=melibiose operon transcriptional regulator%3B autoregulator;protein_id=NP_418542.1;transl_table=11 NC_000913.3 RefSeq gene 4341911 4343266 . + . ID=gene4205;Dbxref=EcoGene:EG10577,GeneID:948636;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;gene_synonym=ECK4112,JW4080,mel-7;locus_tag=b4119 NC_000913.3 RefSeq CDS 4341911 4343266 . + 0 ID=cds4036;Parent=gene4205;Dbxref=ASAP:ABE-0013493,UniProtKB/Swiss-Prot:P06720,Genbank:NP_418543.1,EcoGene:EG10577,GeneID:948636;Name=NP_418543.1;Note=alpha-galactosidase;gbkey=CDS;gene=melA;product=alpha-galactosidase%2C NAD(P)-binding;protein_id=NP_418543.1;transl_table=11 NC_000913.3 RefSeq gene 4343369 4344790 . + . ID=gene4206;Dbxref=EcoGene:EG10578,GeneID:948635;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;gene_synonym=ECK4113,JW4081,mel-4;locus_tag=b4120 NC_000913.3 RefSeq CDS 4343369 4344790 . + 0 ID=cds4037;Parent=gene4206;Dbxref=ASAP:ABE-0013495,UniProtKB/Swiss-Prot:P02921,Genbank:NP_418544.2,EcoGene:EG10578,GeneID:948635;Name=NP_418544.2;Note=melibiose permease II;gbkey=CDS;gene=melB;product=melibiose:sodium symporter;protein_id=NP_418544.2;transl_table=11 NC_000913.3 RefSeq repeat_region 4344815 4344909 . + . ID=id549;Note=RIP327 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4344929 4345558 . - . ID=gene4207;Dbxref=EcoGene:EG12463,GeneID:948634;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;gene_synonym=ECK4114,JW4082;locus_tag=b4121 NC_000913.3 RefSeq CDS 4344929 4345558 . - 0 ID=cds4038;Parent=gene4207;Dbxref=ASAP:ABE-0013498,UniProtKB/Swiss-Prot:P39270,Genbank:NP_418545.1,EcoGene:EG12463,GeneID:948634;Name=NP_418545.1;gbkey=CDS;gene=yjdF;product=DUF2238 family inner membrane protein;protein_id=NP_418545.1;transl_table=11 NC_000913.3 RefSeq gene 4345680 4347326 . - . ID=gene4208;Dbxref=EcoGene:EG10357,GeneID:948642;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;gene_synonym=ECK4115,JW4083;locus_tag=b4122 NC_000913.3 RefSeq CDS 4345680 4347326 . - 0 ID=cds4039;Parent=gene4208;Dbxref=ASAP:ABE-0013501,UniProtKB/Swiss-Prot:P14407,Genbank:NP_418546.1,EcoGene:EG10357,GeneID:948642;Name=NP_418546.1;Note=fumarase B%3D fumarate hydratase Class I%3B anaerobic isozyme;gbkey=CDS;gene=fumB;product=anaerobic class I fumarate hydratase (fumarase B);protein_id=NP_418546.1;transl_table=11 NC_000913.3 RefSeq gene 4347404 4348744 . - . ID=gene4209;Dbxref=EcoGene:EG10006,GeneID:948641;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;gene_synonym=ECK4116,genF,JW4084;locus_tag=b4123 NC_000913.3 RefSeq CDS 4347404 4348744 . - 0 ID=cds4040;Parent=gene4209;Dbxref=ASAP:ABE-0013503,UniProtKB/Swiss-Prot:P0ABN9,Genbank:NP_418547.1,EcoGene:EG10006,GeneID:948641;Name=NP_418547.1;Note=anaerobic dicarboxylate transport;gbkey=CDS;gene=dcuB;product=C4-dicarboxylate transporter%2C anaerobic%3B DcuS co-sensor;protein_id=NP_418547.1;transl_table=11 NC_000913.3 RefSeq gene 4349315 4350034 . - . ID=gene4210;Dbxref=EcoGene:EG12464,GeneID:948640;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;gene_synonym=ECK4117,JW4085,yjdG;locus_tag=b4124 NC_000913.3 RefSeq CDS 4349315 4350034 . - 0 ID=cds4041;Parent=gene4210;Dbxref=ASAP:ABE-0013507,UniProtKB/Swiss-Prot:P0AD01,Genbank:NP_418548.1,EcoGene:EG12464,GeneID:948640;Name=NP_418548.1;gbkey=CDS;gene=dcuR;product=response regulator in two-component regulatory system with DcuS;protein_id=NP_418548.1;transl_table=11 NC_000913.3 RefSeq gene 4350031 4351662 . - . ID=gene4211;Dbxref=EcoGene:EG12465,GeneID:948639;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;gene_synonym=ECK4118,JW4086,yjdH;locus_tag=b4125 NC_000913.3 RefSeq CDS 4350031 4351662 . - 0 ID=cds4042;Parent=gene4211;Dbxref=ASAP:ABE-0013509,UniProtKB/Swiss-Prot:P0AEC8,Genbank:NP_418549.1,EcoGene:EG12465,GeneID:948639;Name=NP_418549.1;gbkey=CDS;gene=dcuS;product=sensory histidine kinase in two-component regulatory system with DcuR%2C regulator of anaerobic fumarate respiration;protein_id=NP_418549.1;transl_table=11 NC_000913.3 RefSeq gene 4351843 4352073 . + . ID=gene4212;Dbxref=EcoGene:EG12466,GeneID:948648;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;gene_synonym=ECK4119,JW4087;locus_tag=b4126 NC_000913.3 RefSeq CDS 4351843 4352073 . + 0 ID=cds4043;Parent=gene4212;Dbxref=ASAP:ABE-0013513,UniProtKB/Swiss-Prot:P0AF59,Genbank:NP_418550.1,EcoGene:EG12466,GeneID:948648;Name=NP_418550.1;gbkey=CDS;gene=yjdI;product=putative 4Fe-4S mono-cluster protein;protein_id=NP_418550.1;transl_table=11 NC_000913.3 RefSeq gene 4352085 4352357 . + . ID=gene4213;Dbxref=EcoGene:EG12467,GeneID:948647;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;gene_synonym=ECK4120,JW4088;locus_tag=b4127 NC_000913.3 RefSeq CDS 4352085 4352357 . + 0 ID=cds4044;Parent=gene4213;Dbxref=ASAP:ABE-0013515,UniProtKB/Swiss-Prot:P39274,Genbank:NP_418551.1,EcoGene:EG12467,GeneID:948647;Name=NP_418551.1;gbkey=CDS;gene=yjdJ;product=GNAT family putative N-acetyltransferase;protein_id=NP_418551.1;transl_table=11 NC_000913.3 RefSeq gene 4352584 4352880 . + . ID=gene4214;Dbxref=EcoGene:EG12468,GeneID:948646;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;gene_synonym=ECK4121,JW4089,yjdK;locus_tag=b4128 NC_000913.3 RefSeq CDS 4352584 4352880 . + 0 ID=cds4045;Parent=gene4214;Dbxref=ASAP:ABE-0013518,UniProtKB/Swiss-Prot:P0AF61,Genbank:NP_418552.1,EcoGene:EG12468,GeneID:948646;Name=NP_418552.1;gbkey=CDS;gene=ghoS;product=antitoxin of GhoTS toxin-antitoxin pair%3B endonuclease for ghoT mRNA;protein_id=NP_418552.1;transl_table=11 NC_000913.3 RefSeq gene 4352908 4353081 . + . ID=gene4215;Dbxref=EcoGene:EG14342,GeneID:1450308;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;gene_synonym=ECK4122,JW5732,yjdO;locus_tag=b4559 NC_000913.3 RefSeq CDS 4352908 4353081 . + 0 ID=cds4046;Parent=gene4215;Dbxref=ASAP:ABE-0285080,UniProtKB/Swiss-Prot:P64646,Genbank:YP_588474.1,EcoGene:EG14342,GeneID:1450308;Name=YP_588474.1;gbkey=CDS;gene=ghoT;product=toxin of GhoTS toxin-antitoxin pair%3B membrane-lytic protein%3B stimulator of persister cell formation;protein_id=YP_588474.1;transl_table=11 NC_000913.3 RefSeq gene 4353200 4354717 . - . ID=gene4216;Dbxref=EcoGene:EG10553,GeneID:948645;Name=lysU;gbkey=Gene;gene=lysU;gene_biotype=protein_coding;gene_synonym=ECK4123,JW4090;locus_tag=b4129 NC_000913.3 RefSeq CDS 4353200 4354717 . - 0 ID=cds4047;Parent=gene4216;Dbxref=ASAP:ABE-0013520,UniProtKB/Swiss-Prot:P0A8N5,Genbank:NP_418553.1,EcoGene:EG10553,GeneID:948645;Name=NP_418553.1;Note=lysine tRNA synthetase%2C inducible%3B heat shock protein;gbkey=CDS;gene=lysU;product=lysine tRNA synthetase%2C inducible;protein_id=NP_418553.1;transl_table=11 NC_000913.3 RefSeq gene 4354954 4356411 . - . ID=gene4217;Dbxref=EcoGene:EG12469,GeneID:948644;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;gene_synonym=ECK4124,JW4091,yjdL;locus_tag=b4130 NC_000913.3 RefSeq CDS 4354954 4356411 . - 0 ID=cds4048;Parent=gene4217;Dbxref=ASAP:ABE-0013524,UniProtKB/Swiss-Prot:P39276,Genbank:NP_418554.1,EcoGene:EG12469,GeneID:948644;Name=NP_418554.1;Note=putative peptide transporter;gbkey=CDS;gene=dtpC;product=dipeptide and tripeptide permease;protein_id=NP_418554.1;transl_table=11 NC_000913.3 RefSeq gene 4356470 4358617 . - . ID=gene4218;Dbxref=EcoGene:EG10131,GeneID:948643;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;gene_synonym=ECK4125,JW4092,ldcI;locus_tag=b4131 NC_000913.3 RefSeq CDS 4356470 4358617 . - 0 ID=cds4049;Parent=gene4218;Dbxref=ASAP:ABE-0013526,UniProtKB/Swiss-Prot:P0A9H3,Genbank:NP_418555.1,EcoGene:EG10131,GeneID:948643;Name=NP_418555.1;gbkey=CDS;gene=cadA;product=lysine decarboxylase%2C acid-inducible;protein_id=NP_418555.1;transl_table=11 NC_000913.3 RefSeq gene 4358697 4360031 . - . ID=gene4219;Dbxref=EcoGene:EG10132,GeneID:948654;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;gene_synonym=ECK4126,JW4093;locus_tag=b4132 NC_000913.3 RefSeq CDS 4358697 4360031 . - 0 ID=cds4050;Parent=gene4219;Dbxref=ASAP:ABE-0013530,UniProtKB/Swiss-Prot:P0AAE8,Genbank:NP_418556.1,EcoGene:EG10132,GeneID:948654;Name=NP_418556.1;Note=transport of lysine/cadaverine;gbkey=CDS;gene=cadB;product=putative lysine/cadaverine transporter;protein_id=NP_418556.1;transl_table=11 NC_000913.3 RefSeq gene 4360396 4361934 . - . ID=gene4220;Dbxref=EcoGene:EG10133,GeneID:948653;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;gene_synonym=ECK4127,JW4094;locus_tag=b4133 NC_000913.3 RefSeq CDS 4360396 4361934 . - 0 ID=cds4051;Parent=gene4220;Dbxref=ASAP:ABE-0013532,UniProtKB/Swiss-Prot:P23890,Genbank:NP_418557.1,EcoGene:EG10133,GeneID:948653;Name=NP_418557.1;Note=transcriptional activator of cad operon;gbkey=CDS;gene=cadC;product=cadBA operon transcriptional activator;protein_id=NP_418557.1;transl_table=11 NC_000913.3 RefSeq gene 4362191 4362353 . - . ID=gene4221;Dbxref=EcoGene:EG14452,GeneID:5625580;Name=yjdQ;gbkey=Gene;gene=yjdQ;gene_biotype=pseudogene;gene_synonym=ECK4457;locus_tag=b4654;pseudo=true NC_000913.3 RefSeq CDS 4362270 4362353 . - 0 ID=cds4052;Parent=gene4221;Dbxref=EcoGene:EG14452,GeneID:5625580;Note=pseudogene%2C P4-like integrase remnant;gbkey=CDS;gene=yjdQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4362191 4362271 . - 0 ID=cds4052;Parent=gene4221;Dbxref=EcoGene:EG14452,GeneID:5625580;Note=pseudogene%2C P4-like integrase remnant;gbkey=CDS;gene=yjdQ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4362551 4362626 . - . ID=gene4222;Dbxref=EcoGene:EG30064,GeneID:948651;Name=pheU;gbkey=Gene;gene=pheU;gene_biotype=tRNA;gene_synonym=ECK4128,JWR0111,pheR,pheW;locus_tag=b4134 NC_000913.3 RefSeq tRNA 4362551 4362626 . - . ID=rna168;Parent=gene4222;Dbxref=ASAP:ABE-0013535,EcoGene:EG30064,GeneID:948651;Note=anticodon: GAA;gbkey=tRNA;gene=pheU;product=tRNA-Phe NC_000913.3 RefSeq exon 4362551 4362626 . - . ID=id550;Parent=rna168;Dbxref=ASAP:ABE-0013535,EcoGene:EG30064,GeneID:948651;Note=anticodon: GAA;gbkey=tRNA;gene=pheU;product=tRNA-Phe NC_000913.3 RefSeq gene 4362733 4363308 . - . ID=gene4223;Dbxref=EcoGene:EG12176,GeneID:948650;Name=yjdC;gbkey=Gene;gene=yjdC;gene_biotype=protein_coding;gene_synonym=cutA3,ECK4129,JW5733;locus_tag=b4135 NC_000913.3 RefSeq CDS 4362733 4363308 . - 0 ID=cds4053;Parent=gene4223;Dbxref=ASAP:ABE-0013537,UniProtKB/Swiss-Prot:P0ACU7,Genbank:NP_418558.2,EcoGene:EG12176,GeneID:948650;Name=NP_418558.2;gbkey=CDS;gene=yjdC;product=putative transcriptional regulator;protein_id=NP_418558.2;transl_table=11 NC_000913.3 RefSeq gene 4363345 4365042 . - . ID=gene4224;Dbxref=EcoGene:EG12178,GeneID:948649;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;gene_synonym=cutA2,cycZ,dipZ,ECK4130,htrI,JW5734;locus_tag=b4136 NC_000913.3 RefSeq CDS 4363345 4365042 . - 0 ID=cds4054;Parent=gene4224;Dbxref=ASAP:ABE-0013539,UniProtKB/Swiss-Prot:P36655,Genbank:NP_418559.1,EcoGene:EG12178,GeneID:948649;Name=NP_418559.1;Note=thiol:disulfide interchange protein%3B copper tolerance;gbkey=CDS;gene=dsbD;product=thiol:disulfide interchange protein and activator of DsbC;protein_id=NP_418559.1;transl_table=11 NC_000913.3 RefSeq gene 4365018 4365356 . - . ID=gene4225;Dbxref=EcoGene:EG12177,GeneID:948660;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;gene_synonym=cutA1,cycY,ECK4131,JW4097;locus_tag=b4137 NC_000913.3 RefSeq CDS 4365018 4365356 . - 0 ID=cds4055;Parent=gene4225;Dbxref=ASAP:ABE-0013544,UniProtKB/Swiss-Prot:P69488,Genbank:NP_418560.1,EcoGene:EG12177,GeneID:948660;Name=NP_418560.1;Note=divalent cation tolerance protein%3B cytochrome c biogenesis;gbkey=CDS;gene=cutA;product=divalent-cation tolerance protein%2C copper sensitivity;protein_id=NP_418560.1;transl_table=11 NC_000913.3 RefSeq gene 4365472 4366773 . - . ID=gene4226;Dbxref=EcoGene:EG11225,GeneID:948659;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;gene_synonym=ECK4132,genA,JW5735;locus_tag=b4138 NC_000913.3 RefSeq CDS 4365472 4366773 . - 0 ID=cds4056;Parent=gene4226;Dbxref=ASAP:ABE-0013546,UniProtKB/Swiss-Prot:P0ABN5,Genbank:NP_418561.1,EcoGene:EG11225,GeneID:948659;Name=NP_418561.1;Note=anaerobic dicarboxylate transport;gbkey=CDS;gene=dcuA;product=C4-dicarboxylate antiporter;protein_id=NP_418561.1;transl_table=11 NC_000913.3 RefSeq gene 4366891 4368327 . - . ID=gene4227;Dbxref=EcoGene:EG10095,GeneID:948658;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;gene_synonym=ECK4133,JW4099;locus_tag=b4139 NC_000913.3 RefSeq CDS 4366891 4368327 . - 0 ID=cds4057;Parent=gene4227;Dbxref=ASAP:ABE-0013551,UniProtKB/Swiss-Prot:P0AC38,Genbank:NP_418562.4,EcoGene:EG10095,GeneID:948658;Name=NP_418562.4;Note=aspartate ammonia-lyase (aspartase);gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=NP_418562.4;transl_table=11 NC_000913.3 RefSeq gene 4368664 4369140 . + . ID=gene4228;Dbxref=EcoGene:EG12382,GeneID:948657;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;gene_synonym=ECK4134,JW4100,yjeG;locus_tag=b4140 NC_000913.3 RefSeq CDS 4368664 4369140 . + 0 ID=cds4058;Parent=gene4228;Dbxref=ASAP:ABE-0013557,UniProtKB/Swiss-Prot:P37147,Genbank:NP_418564.2,EcoGene:EG12382,GeneID:948657;Name=NP_418564.2;gbkey=CDS;gene=fxsA;product=suppressor of F exclusion of phage T7;protein_id=NP_418564.2;transl_table=11 NC_000913.3 RefSeq gene 4369156 4370412 . - . ID=gene4229;Dbxref=EcoGene:EG12470,GeneID:948656;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;gene_synonym=ECK4135,JW4101;locus_tag=b4141 NC_000913.3 RefSeq CDS 4369156 4370412 . - 0 ID=cds4059;Parent=gene4229;Dbxref=ASAP:ABE-0013559,UniProtKB/Swiss-Prot:P39277,Genbank:NP_418565.1,EcoGene:EG12470,GeneID:948656;Name=NP_418565.1;Note=putative transport;gbkey=CDS;gene=yjeH;product=putative transporter;protein_id=NP_418565.1;transl_table=11 NC_000913.3 RefSeq gene 4370688 4370981 . + . ID=gene4230;Dbxref=EcoGene:EG10600,GeneID:948655;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;gene_synonym=ECK4136,groES,JW4102,mopB,TabB;locus_tag=b4142 NC_000913.3 RefSeq CDS 4370688 4370981 . + 0 ID=cds4060;Parent=gene4230;Dbxref=ASAP:ABE-0013566,UniProtKB/Swiss-Prot:P0A6F9,Genbank:NP_418566.1,EcoGene:EG10600,GeneID:948655;Name=NP_418566.1;Note=GroES%2C 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP%2C suppressing its ATPase activity;gbkey=CDS;gene=groS;product=Cpn10 chaperonin GroES%2C small subunit of GroESL;protein_id=NP_418566.1;transl_table=11 NC_000913.3 RefSeq gene 4371025 4372671 . + . ID=gene4231;Dbxref=EcoGene:EG10599,GeneID:948665;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;gene_synonym=ECK4137,groEL,JW4103,mopA;locus_tag=b4143 NC_000913.3 RefSeq CDS 4371025 4372671 . + 0 ID=cds4061;Parent=gene4231;Dbxref=ASAP:ABE-0013568,UniProtKB/Swiss-Prot:P0A6F5,Genbank:NP_418567.1,EcoGene:EG10599,GeneID:948665;Name=NP_418567.1;gbkey=CDS;gene=groL;product=Cpn60 chaperonin GroEL%2C large subunit of GroESL;protein_id=NP_418567.1;transl_table=11 NC_000913.3 RefSeq gene 4372809 4373162 . + . ID=gene4232;Dbxref=EcoGene:EG12471,GeneID:948664;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;gene_synonym=ECK4138,JW5736;locus_tag=b4144 NC_000913.3 RefSeq CDS 4372809 4373162 . + 0 ID=cds4062;Parent=gene4232;Dbxref=ASAP:ABE-0013572,UniProtKB/Swiss-Prot:P0AF70,Genbank:NP_418568.2,EcoGene:EG12471,GeneID:948664;Name=NP_418568.2;gbkey=CDS;gene=yjeI;product=DUF4156 family lipoprotein;protein_id=NP_418568.2;transl_table=11 NC_000913.3 RefSeq repeat_region 4373197 4373295 . + . ID=id551;Note=RIP328 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4373365 4374234 . - . ID=gene4233;Dbxref=EcoGene:EG12472,GeneID:948663;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;gene_synonym=ECK4139,JW4105;locus_tag=b4145 NC_000913.3 RefSeq CDS 4373365 4374234 . - 0 ID=cds4063;Parent=gene4233;Dbxref=ASAP:ABE-0013575,UniProtKB/Swiss-Prot:P39279,Genbank:NP_418569.1,EcoGene:EG12472,GeneID:948663;Name=NP_418569.1;gbkey=CDS;gene=yjeJ;product=uncharacterized protein;protein_id=NP_418569.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4374498 4374596 . + . ID=id552;Note=RIP329 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4374629 4375657 . - . ID=gene4234;Dbxref=EcoGene:EG12473,GeneID:948662;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;gene_synonym=ECK4140,JW4106,yjeK;locus_tag=b4146 NC_000913.3 RefSeq CDS 4374629 4375657 . - 0 ID=cds4064;Parent=gene4234;Dbxref=ASAP:ABE-0013580,UniProtKB/Swiss-Prot:P39280,Genbank:NP_418570.1,EcoGene:EG12473,GeneID:948662;Name=NP_418570.1;gbkey=CDS;gene=epmB;product=EF-P-Lys34 lysylation protein%3B weak lysine 2%2C3-aminomutase;protein_id=NP_418570.1;transl_table=11 NC_000913.3 RefSeq gene 4375699 4376265 . + . ID=gene4235;Dbxref=EcoGene:EG12099,GeneID:948661;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;gene_synonym=ECK4141,JW4107;locus_tag=b4147 NC_000913.3 RefSeq CDS 4375699 4376265 . + 0 ID=cds4065;Parent=gene4235;Dbxref=ASAP:ABE-0013583,UniProtKB/Swiss-Prot:P0A6N4,Genbank:NP_418571.1,EcoGene:EG12099,GeneID:948661;Name=NP_418571.1;Note=elongation factor P (EF-P);gbkey=CDS;gene=efp;product=polyproline-specific translation elongation factor EF-P;protein_id=NP_418571.1;transl_table=11 NC_000913.3 RefSeq gene 4376317 4376442 . + . ID=gene4236;Dbxref=EcoGene:EG14372,GeneID:2847736;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;gene_synonym=ECK4142,JW5737;locus_tag=b4410 NC_000913.3 RefSeq CDS 4376317 4376442 . + 0 ID=cds4066;Parent=gene4236;Dbxref=ASAP:ABE-0047210,UniProtKB/Swiss-Prot:P0ADB4,Genbank:YP_026283.1,EcoGene:EG14372,GeneID:2847736;Name=YP_026283.1;Note=entericidin A~antidote to lipoprotein entericidin B%3B component of a chromosomally encoded addiction module;gbkey=CDS;gene=ecnA;product=entericidin A membrane lipoprotein%2C antidote entericidin B;protein_id=YP_026283.1;transl_table=11 NC_000913.3 RefSeq gene 4376553 4376699 . + . ID=gene4237;Dbxref=EcoGene:EG14345,GeneID:2847737;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;gene_synonym=ECK4143,JW4108,yjeU;locus_tag=b4411 NC_000913.3 RefSeq CDS 4376553 4376699 . + 0 ID=cds4067;Parent=gene4237;Dbxref=ASAP:ABE-0047211,UniProtKB/Swiss-Prot:P0ADB7,Genbank:YP_026284.1,EcoGene:EG14345,GeneID:2847737;Name=YP_026284.1;Note=entericidin B~bacteriolytic lipoprotein%3B component of a chromosomally encoded addiction module;gbkey=CDS;gene=ecnB;product=entericidin B membrane lipoprotein;protein_id=YP_026284.1;transl_table=11 NC_000913.3 RefSeq gene 4376875 4377192 . + . ID=gene4238;Dbxref=EcoGene:EG11616,GeneID:948671;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;gene_synonym=ECK4144,JW5738;locus_tag=b4148 NC_000913.3 RefSeq CDS 4376875 4377192 . + 0 ID=cds4068;Parent=gene4238;Dbxref=ASAP:ABE-0013588,UniProtKB/Swiss-Prot:P69937,Genbank:NP_418572.4,EcoGene:EG11616,GeneID:948671;Name=NP_418572.4;Note=suppresses groEL%2C may be chaperone;gbkey=CDS;gene=sugE;product=multidrug efflux system protein;protein_id=NP_418572.4;transl_table=11 NC_000913.3 RefSeq gene 4377189 4377722 . - . ID=gene4239;Dbxref=EcoGene:EG12474,GeneID:948670;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;gene_synonym=ECK4145,JW4110,yjeL;locus_tag=b4149 NC_000913.3 RefSeq CDS 4377189 4377722 . - 0 ID=cds4069;Parent=gene4239;Dbxref=ASAP:ABE-0013590,UniProtKB/Swiss-Prot:P0A901,Genbank:NP_418573.1,EcoGene:EG12474,GeneID:948670;Name=NP_418573.1;gbkey=CDS;gene=blc;product=outer membrane lipoprotein cell division and growth lipocalin;protein_id=NP_418573.1;transl_table=11 NC_000913.3 RefSeq gene 4377811 4378944 . - . ID=gene4240;Dbxref=EcoGene:EG10040,GeneID:948669;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;gene_synonym=ampA,ECK4146,JW4111;locus_tag=b4150 NC_000913.3 RefSeq CDS 4377811 4378944 . - 0 ID=cds4070;Parent=gene4240;Dbxref=ASAP:ABE-0013592,UniProtKB/Swiss-Prot:P00811,Genbank:NP_418574.1,EcoGene:EG10040,GeneID:948669;Name=NP_418574.1;Note=beta-lactamase%3B penicillin resistance;gbkey=CDS;gene=ampC;product=penicillin-binding protein%3B beta-lactamase%2C intrinsically weak;protein_id=NP_418574.1;transl_table=11 NC_000913.3 RefSeq gene 4379007 4379366 . - . ID=gene4241;Dbxref=EcoGene:EG10333,GeneID:948668;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;gene_synonym=ECK4147,JW4112;locus_tag=b4151 NC_000913.3 RefSeq CDS 4379007 4379366 . - 0 ID=cds4071;Parent=gene4241;Dbxref=ASAP:ABE-0013595,UniProtKB/Swiss-Prot:P0A8Q3,Genbank:NP_418575.1,EcoGene:EG10333,GeneID:948668;Name=NP_418575.1;Note=fumarate reductase%2C anaerobic%2C membrane anchor polypeptide;gbkey=CDS;gene=frdD;product=fumarate reductase (anaerobic)%2C membrane anchor subunit;protein_id=NP_418575.1;transl_table=11 NC_000913.3 RefSeq gene 4379377 4379772 . - . ID=gene4242;Dbxref=EcoGene:EG10332,GeneID:948680;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;gene_synonym=ECK4148,JW4113;locus_tag=b4152 NC_000913.3 RefSeq CDS 4379377 4379772 . - 0 ID=cds4072;Parent=gene4242;Dbxref=ASAP:ABE-0013598,UniProtKB/Swiss-Prot:P0A8Q0,Genbank:NP_418576.1,EcoGene:EG10332,GeneID:948680;Name=NP_418576.1;Note=fumarate reductase%2C anaerobic%2C membrane anchor polypeptide;gbkey=CDS;gene=frdC;product=fumarate reductase (anaerobic)%2C membrane anchor subunit;protein_id=NP_418576.1;transl_table=11 NC_000913.3 RefSeq gene 4379783 4380517 . - . ID=gene4243;Dbxref=EcoGene:EG10331,GeneID:948666;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;gene_synonym=ECK4149,JW4114;locus_tag=b4153 NC_000913.3 RefSeq CDS 4379783 4380517 . - 0 ID=cds4073;Parent=gene4243;Dbxref=ASAP:ABE-0013602,UniProtKB/Swiss-Prot:P0AC47,Genbank:NP_418577.1,EcoGene:EG10331,GeneID:948666;Name=NP_418577.1;Note=fumarate reductase%2C anaerobic%2C iron-sulfur protein subunit;gbkey=CDS;gene=frdB;product=fumarate reductase (anaerobic)%2C Fe-S subunit;protein_id=NP_418577.1;transl_table=11 NC_000913.3 RefSeq gene 4380510 4382318 . - . ID=gene4244;Dbxref=EcoGene:EG10330,GeneID:948667;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;gene_synonym=ECK4150,JW4115;locus_tag=b4154 NC_000913.3 RefSeq CDS 4380510 4382318 . - 0 ID=cds4074;Parent=gene4244;Dbxref=ASAP:ABE-0013604,UniProtKB/Swiss-Prot:P00363,Genbank:NP_418578.1,EcoGene:EG10330,GeneID:948667;Name=NP_418578.1;Note=fumarate reductase%2C anaerobic%2C flavoprotein subunit;gbkey=CDS;gene=frdA;product=anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit;protein_id=NP_418578.1;transl_table=11 NC_000913.3 RefSeq gene 4382643 4383620 . + . ID=gene4245;Dbxref=EcoGene:EG11211,GeneID:948672;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;gene_synonym=ECK4151,genX,JW4116,poxA,yjeA;locus_tag=b4155 NC_000913.3 RefSeq CDS 4382643 4383620 . + 0 ID=cds4075;Parent=gene4245;Dbxref=ASAP:ABE-0013610,UniProtKB/Swiss-Prot:P0A8N7,Genbank:NP_418579.2,EcoGene:EG11211,GeneID:948672;Name=NP_418579.2;Note=putative lysyl-tRNA synthetase;gbkey=CDS;gene=epmA;product=Elongation Factor P Lys34 lysyltransferase;protein_id=NP_418579.2;transl_table=11 NC_000913.3 RefSeq gene 4383839 4385341 . + . ID=gene4246;Dbxref=EcoGene:EG12475,GeneID:948679;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;gene_synonym=ECK4152,JW5739;locus_tag=b4156 NC_000913.3 RefSeq CDS 4383839 4385341 . + 0 ID=cds4076;Parent=gene4246;Dbxref=ASAP:ABE-0013613,UniProtKB/Swiss-Prot:P39282,Genbank:NP_418580.2,EcoGene:EG12475,GeneID:948679;Name=NP_418580.2;Note=putative transport;gbkey=CDS;gene=yjeM;product=putative transporter;protein_id=NP_418580.2;transl_table=11 NC_000913.3 RefSeq gene 4385393 4385707 . + . ID=gene4247;Dbxref=EcoGene:EG12476,GeneID:948678;Name=yjeN;gbkey=Gene;gene=yjeN;gene_biotype=protein_coding;gene_synonym=ECK4153,JW4118;locus_tag=b4157 NC_000913.3 RefSeq CDS 4385393 4385707 . + 0 ID=cds4077;Parent=gene4247;Dbxref=ASAP:ABE-0013617,UniProtKB/Swiss-Prot:P39283,Genbank:NP_418581.1,EcoGene:EG12476,GeneID:948678;Name=NP_418581.1;gbkey=CDS;gene=yjeN;product=uncharacterized protein;protein_id=NP_418581.1;transl_table=11 NC_000913.3 RefSeq gene 4385704 4386018 . + . ID=gene4248;Dbxref=EcoGene:EG12477,GeneID:948677;Name=yjeO;gbkey=Gene;gene=yjeO;gene_biotype=protein_coding;gene_synonym=ECK4154,JW4119;locus_tag=b4158 NC_000913.3 RefSeq CDS 4385704 4386018 . + 0 ID=cds4078;Parent=gene4248;Dbxref=ASAP:ABE-0013619,UniProtKB/Swiss-Prot:P39284,Genbank:NP_418582.1,EcoGene:EG12477,GeneID:948677;Name=NP_418582.1;gbkey=CDS;gene=yjeO;product=inner membrane protein;protein_id=NP_418582.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4386019 4386038 . + . ID=id553;Note=REP330 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4386047 4389370 . - . ID=gene4249;Dbxref=EcoGene:EG12478,GeneID:948676;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;gene_synonym=ECK4155,JW4120,yjeP;locus_tag=b4159 NC_000913.3 RefSeq CDS 4386047 4389370 . - 0 ID=cds4079;Parent=gene4249;Dbxref=ASAP:ABE-0013621,UniProtKB/Swiss-Prot:P39285,Genbank:NP_418583.1,EcoGene:EG12478,GeneID:948676;Name=NP_418583.1;Note=putative periplasmic binding protein;gbkey=CDS;gene=mscM;product=mechanosensitive channel protein%2C miniconductance;protein_id=NP_418583.1;transl_table=11 NC_000913.3 RefSeq gene 4389392 4390360 . - . ID=gene4250;Dbxref=EcoGene:EG10775,GeneID:948673;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;gene_synonym=ECK4156,JW4121;locus_tag=b4160 NC_000913.3 RefSeq CDS 4389392 4390360 . - 0 ID=cds4080;Parent=gene4250;Dbxref=ASAP:ABE-0013623,UniProtKB/Swiss-Prot:P0A8K1,Genbank:NP_418584.1,EcoGene:EG10775,GeneID:948673;Name=NP_418584.1;Note=phosphatidylserine decarboxylase%3B phospholipid synthesis;gbkey=CDS;gene=psd;product=phosphatidylserine decarboxylase;protein_id=NP_418584.1;transl_table=11 NC_000913.3 RefSeq gene 4390457 4391509 . - . ID=gene4251;Dbxref=EcoGene:EG12479,GeneID:948674;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;gene_synonym=ECK4157,engC,JW4122,yjeQ;locus_tag=b4161 NC_000913.3 RefSeq CDS 4390457 4391509 . - 0 ID=cds4081;Parent=gene4251;Dbxref=ASAP:ABE-0013626,UniProtKB/Swiss-Prot:P39286,Genbank:NP_418585.4,EcoGene:EG12479,GeneID:948674;Name=NP_418585.4;gbkey=CDS;gene=rsgA;product=ribosome small subunit-dependent GTPase A;protein_id=NP_418585.4;transl_table=11 NC_000913.3 RefSeq gene 4391604 4392149 . + . ID=gene4252;Dbxref=EcoGene:EG12480,GeneID:948675;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;gene_synonym=ECK4158,JW5740,yjeR;locus_tag=b4162 NC_000913.3 RefSeq CDS 4391604 4392149 . + 0 ID=cds4082;Parent=gene4252;Dbxref=ASAP:ABE-0013631,UniProtKB/Swiss-Prot:P0A784,Genbank:NP_418586.4,EcoGene:EG12480,GeneID:948675;Name=NP_418586.4;gbkey=CDS;gene=orn;product=oligoribonuclease;protein_id=NP_418586.4;transl_table=11 NC_000913.3 RefSeq gene 4392360 4392435 . + . ID=gene4253;Dbxref=EcoGene:EG30038,GeneID:948682;Name=glyV;gbkey=Gene;gene=glyV;gene_biotype=tRNA;gene_synonym=ECK4159,glyValpha,ins,JWR0112,suA58,suA78;locus_tag=b4163 NC_000913.3 RefSeq tRNA 4392360 4392435 . + . ID=rna169;Parent=gene4253;Dbxref=ASAP:ABE-0013635,EcoGene:EG30038,GeneID:948682;Note=anticodon: GCC;gbkey=tRNA;gene=glyV;product=tRNA-Gly NC_000913.3 RefSeq exon 4392360 4392435 . + . ID=id554;Parent=rna169;Dbxref=ASAP:ABE-0013635,EcoGene:EG30038,GeneID:948682;Note=anticodon: GCC;gbkey=tRNA;gene=glyV;product=tRNA-Gly NC_000913.3 RefSeq gene 4392472 4392547 . + . ID=gene4254;Dbxref=EcoGene:EG30040,GeneID:948681;Name=glyX;gbkey=Gene;gene=glyX;gene_biotype=tRNA;gene_synonym=ECK4160,glyVbeta,JWR0113,mutA;locus_tag=b4164 NC_000913.3 RefSeq tRNA 4392472 4392547 . + . ID=rna170;Parent=gene4254;Dbxref=ASAP:ABE-0013637,EcoGene:EG30040,GeneID:948681;Note=anticodon: GCC;gbkey=tRNA;gene=glyX;product=tRNA-Gly NC_000913.3 RefSeq exon 4392472 4392547 . + . ID=id555;Parent=rna170;Dbxref=ASAP:ABE-0013637,EcoGene:EG30040,GeneID:948681;Note=anticodon: GCC;gbkey=tRNA;gene=glyX;product=tRNA-Gly NC_000913.3 RefSeq gene 4392583 4392658 . + . ID=gene4255;Dbxref=EcoGene:EG30041,GeneID:948687;Name=glyY;gbkey=Gene;gene=glyY;gene_biotype=tRNA;gene_synonym=ECK4161,glyVgamma,JWR0114;locus_tag=b4165 NC_000913.3 RefSeq tRNA 4392583 4392658 . + . ID=rna171;Parent=gene4255;Dbxref=ASAP:ABE-0013639,EcoGene:EG30041,GeneID:948687;Note=anticodon: GCC;gbkey=tRNA;gene=glyY;product=tRNA-Gly NC_000913.3 RefSeq exon 4392583 4392658 . + . ID=id556;Parent=rna171;Dbxref=ASAP:ABE-0013639,EcoGene:EG30041,GeneID:948687;Note=anticodon: GCC;gbkey=tRNA;gene=glyY;product=tRNA-Gly NC_000913.3 RefSeq gene 4392892 4392945 . + . ID=gene4256;Dbxref=EcoGene:EG14475,GeneID:7751630;Name=yjeV;gbkey=Gene;gene=yjeV;gene_biotype=protein_coding;gene_synonym=ECK4485;locus_tag=b4670 NC_000913.3 RefSeq CDS 4392892 4392945 . + 0 ID=cds4083;Parent=gene4256;Dbxref=UniProtKB/Swiss-Prot:C1P621,Genbank:YP_002791261.1,EcoGene:EG14475,GeneID:7751630;Name=YP_002791261.1;gbkey=CDS;gene=yjeV;product=uncharacterized protein;protein_id=YP_002791261.1;transl_table=11 NC_000913.3 RefSeq gene 4392928 4394067 . - . ID=gene4257;Dbxref=EcoGene:EG12481,GeneID:948686;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;gene_synonym=ECK4162,JW4124,yjeS;locus_tag=b4166 NC_000913.3 RefSeq CDS 4392928 4394067 . - 0 ID=cds4084;Parent=gene4257;Dbxref=ASAP:ABE-0013641,UniProtKB/Swiss-Prot:P39288,Genbank:NP_418587.1,EcoGene:EG12481,GeneID:948686;Name=NP_418587.1;gbkey=CDS;gene=queG;product=epoxyqueuosine reductase%2C cobalamine-stimulated%3B queosine biosynthesis;protein_id=NP_418587.1;transl_table=11 NC_000913.3 RefSeq gene 4394066 4395613 . + . ID=gene4258;Dbxref=EcoGene:EG11758,GeneID:948685;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;gene_synonym=ECK4163,JW4125,yjeF;locus_tag=b4167 NC_000913.3 RefSeq CDS 4394066 4395613 . + 0 ID=cds4085;Parent=gene4258;Dbxref=ASAP:ABE-0013644,UniProtKB/Swiss-Prot:P31806,Genbank:NP_418588.1,EcoGene:EG11758,GeneID:948685;Name=NP_418588.1;gbkey=CDS;gene=nnr;product=bifunctional NAD(P)H-hydrate repair enzyme%3B C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase;protein_id=NP_418588.1;transl_table=11 NC_000913.3 RefSeq gene 4395585 4396046 . + . ID=gene4259;Dbxref=EcoGene:EG11757,GeneID:948684;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;gene_synonym=ECK4164,JW4126,yjeE;locus_tag=b4168 NC_000913.3 RefSeq CDS 4395585 4396046 . + 0 ID=cds4086;Parent=gene4259;Dbxref=ASAP:ABE-0013649,UniProtKB/Swiss-Prot:P0AF67,Genbank:NP_418589.1,EcoGene:EG11757,GeneID:948684;Name=NP_418589.1;gbkey=CDS;gene=tsaE;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein%3B ADP binding protein;protein_id=NP_418589.1;transl_table=11 NC_000913.3 RefSeq gene 4396065 4397402 . + . ID=gene4260;Dbxref=EcoGene:EG11363,GeneID:948683;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;gene_synonym=ECK4165,JW4127,yjeD;locus_tag=b4169 NC_000913.3 RefSeq CDS 4396065 4397402 . + 0 ID=cds4087;Parent=gene4260;Dbxref=ASAP:ABE-0013653,UniProtKB/Swiss-Prot:P26365,Genbank:NP_418590.1,EcoGene:EG11363,GeneID:948683;Name=NP_418590.1;Note=N-acetylmuramoyl-l-alanine amidase II%3B a murein hydrolase;gbkey=CDS;gene=amiB;product=N-acetylmuramoyl-l-alanine amidase II;protein_id=NP_418590.1;transl_table=11 NC_000913.3 RefSeq gene 4397412 4399259 . + . ID=gene4261;Dbxref=EcoGene:EG11281,GeneID:948691;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;gene_synonym=ECK4166,JW4128;locus_tag=b4170 NC_000913.3 RefSeq CDS 4397412 4399259 . + 0 ID=cds4088;Parent=gene4261;Dbxref=ASAP:ABE-0013655,UniProtKB/Swiss-Prot:P23367,Genbank:NP_418591.1,EcoGene:EG11281,GeneID:948691;Name=NP_418591.1;Note=enzyme in methyl-directed mismatch repair;gbkey=CDS;gene=mutL;product=methyl-directed mismatch repair protein;protein_id=NP_418591.1;transl_table=11 NC_000913.3 RefSeq gene 4399252 4400202 . + . ID=gene4262;Dbxref=EcoGene:EG10595,GeneID:948690;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;gene_synonym=ECK4167,JW4129,trpX;locus_tag=b4171 NC_000913.3 RefSeq CDS 4399252 4400202 . + 0 ID=cds4089;Parent=gene4262;Dbxref=ASAP:ABE-0013657,UniProtKB/Swiss-Prot:P16384,Genbank:NP_418592.1,EcoGene:EG10595,GeneID:948690;Name=NP_418592.1;gbkey=CDS;gene=miaA;product=delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase;protein_id=NP_418592.1;transl_table=11 NC_000913.3 RefSeq gene 4400288 4400596 . + . ID=gene4263;Dbxref=EcoGene:EG10438,GeneID:948689;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;gene_synonym=ECK4168,JW4130;locus_tag=b4172 NC_000913.3 RefSeq CDS 4400288 4400596 . + 0 ID=cds4090;Parent=gene4263;Dbxref=ASAP:ABE-0013659,UniProtKB/Swiss-Prot:P0A6X3,Genbank:NP_418593.1,EcoGene:EG10438,GeneID:948689;Name=NP_418593.1;Note=host factor I for bacteriophage Q beta replication%2C a growth-related protein;gbkey=CDS;gene=hfq;product=global sRNA chaperone%3B HF-I%2C host factor for RNA phage Q beta replication;protein_id=NP_418593.1;transl_table=11 NC_000913.3 RefSeq gene 4400672 4401952 . + . ID=gene4264;Dbxref=EcoGene:EG10437,GeneID:948688;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;gene_synonym=ECK4169,hflA,hslX,JW4131;locus_tag=b4173 NC_000913.3 RefSeq CDS 4400672 4401952 . + 0 ID=cds4091;Parent=gene4264;Dbxref=ASAP:ABE-0013661,UniProtKB/Swiss-Prot:P25519,Genbank:NP_418594.1,EcoGene:EG10437,GeneID:948688;Name=NP_418594.1;Note=GTP - binding subunit of protease specific for phage lambda cII repressor;gbkey=CDS;gene=hflX;product=GTPase%2C stimulated by 50S subunit binding%3B Mn(2+) homeostasis regulator;protein_id=NP_418594.1;transl_table=11 NC_000913.3 RefSeq gene 4402038 4403297 . + . ID=gene4265;Dbxref=EcoGene:EG10436,GeneID:948698;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;gene_synonym=ECK4170,hflA,hslY,JW4132;locus_tag=b4174 NC_000913.3 RefSeq CDS 4402038 4403297 . + 0 ID=cds4092;Parent=gene4265;Dbxref=ASAP:ABE-0013663,UniProtKB/Swiss-Prot:P0ABC7,Genbank:NP_418595.1,EcoGene:EG10436,GeneID:948698;Name=NP_418595.1;Note=protease specific for phage lambda cII repressor;gbkey=CDS;gene=hflK;product=modulator for HflB protease specific for phage lambda cII repressor;protein_id=NP_418595.1;transl_table=11 NC_000913.3 RefSeq gene 4403300 4404304 . + . ID=gene4266;Dbxref=EcoGene:EG10435,GeneID:948697;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;gene_synonym=ECK4171,hflA,JW4133;locus_tag=b4175 NC_000913.3 RefSeq CDS 4403300 4404304 . + 0 ID=cds4093;Parent=gene4266;Dbxref=ASAP:ABE-0013665,UniProtKB/Swiss-Prot:P0ABC3,Genbank:NP_418596.1,EcoGene:EG10435,GeneID:948697;Name=NP_418596.1;Note=protease specific for phage lambda cII repressor;gbkey=CDS;gene=hflC;product=HflB protease modulator specific for phage lambda cII repressor;protein_id=NP_418596.1;transl_table=11 NC_000913.3 RefSeq gene 4404386 4404583 . + . ID=gene4267;Dbxref=EcoGene:EG12482,GeneID:948696;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;gene_synonym=ECK4172,JW4134;locus_tag=b4176 NC_000913.3 RefSeq CDS 4404386 4404583 . + 0 ID=cds4094;Parent=gene4267;Dbxref=ASAP:ABE-0013669,UniProtKB/Swiss-Prot:P0AF73,Genbank:NP_418597.1,EcoGene:EG12482,GeneID:948696;Name=NP_418597.1;gbkey=CDS;gene=yjeT;product=DUF2065 family protein;protein_id=NP_418597.1;transl_table=11 NC_000913.3 RefSeq gene 4404687 4405985 . + . ID=gene4268;Dbxref=EcoGene:EG10790,GeneID:948695;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;gene_synonym=ECK4173,JW4135;locus_tag=b4177 NC_000913.3 RefSeq CDS 4404687 4405985 . + 0 ID=cds4095;Parent=gene4268;Dbxref=ASAP:ABE-0013672,UniProtKB/Swiss-Prot:P0A7D4,Genbank:NP_418598.1,EcoGene:EG10790,GeneID:948695;Name=NP_418598.1;gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=NP_418598.1;transl_table=11 NC_000913.3 RefSeq gene 4406190 4406615 . + . ID=gene4269;Dbxref=EcoGene:EG11212,GeneID:948693;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;gene_synonym=ECK4174,JW4136,yjeB;locus_tag=b4178 NC_000913.3 RefSeq CDS 4406190 4406615 . + 0 ID=cds4096;Parent=gene4269;Dbxref=ASAP:ABE-0013676,UniProtKB/Swiss-Prot:P0AF63,Genbank:NP_418599.1,EcoGene:EG11212,GeneID:948693;Name=NP_418599.1;gbkey=CDS;gene=nsrR;product=nitric oxide-sensitive repressor for NO regulon;protein_id=NP_418599.1;transl_table=11 NC_000913.3 RefSeq gene 4406654 4409095 . + . ID=gene4270;Dbxref=EcoGene:EG11259,GeneID:948692;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;gene_synonym=ECK4175,JW5741,vacB,yjeC;locus_tag=b4179 NC_000913.3 RefSeq CDS 4406654 4409095 . + 0 ID=cds4097;Parent=gene4270;Dbxref=ASAP:ABE-0013678,UniProtKB/Swiss-Prot:P21499,Genbank:NP_418600.4,EcoGene:EG11259,GeneID:948692;Name=NP_418600.4;gbkey=CDS;gene=rnr;product=exoribonuclease R%2C RNase R;protein_id=NP_418600.4;transl_table=11 NC_000913.3 RefSeq repeat_region 4409153 4409250 . + . ID=id557;Note=RIP331 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4409275 4410006 . + . ID=gene4271;Dbxref=EcoGene:EG12483,GeneID:948694;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;gene_synonym=ECK4176,JW4138,yjfH;locus_tag=b4180 NC_000913.3 RefSeq CDS 4409275 4410006 . + 0 ID=cds4098;Parent=gene4271;Dbxref=ASAP:ABE-0013684,UniProtKB/Swiss-Prot:P63177,Genbank:NP_418601.1,EcoGene:EG12483,GeneID:948694;Name=NP_418601.1;gbkey=CDS;gene=rlmB;product=23S rRNA mG2251 2'-O-ribose methyltransferase%2C SAM-dependent;protein_id=NP_418601.1;transl_table=11 NC_000913.3 RefSeq gene 4410133 4410534 . + . ID=gene4272;Dbxref=EcoGene:EG12484,GeneID:948704;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;gene_synonym=ECK4177,JW4139;locus_tag=b4181 NC_000913.3 RefSeq CDS 4410133 4410534 . + 0 ID=cds4099;Parent=gene4272;Dbxref=ASAP:ABE-0013687,UniProtKB/Swiss-Prot:P0AF76,Genbank:NP_418602.1,EcoGene:EG12484,GeneID:948704;Name=NP_418602.1;gbkey=CDS;gene=yjfI;product=DUF2170 family protein;protein_id=NP_418602.1;transl_table=11 NC_000913.3 RefSeq gene 4410553 4411251 . + . ID=gene4273;Dbxref=EcoGene:EG12485,GeneID:948703;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;gene_synonym=ECK4178,JW4140;locus_tag=b4182 NC_000913.3 RefSeq CDS 4410553 4411251 . + 0 ID=cds4100;Parent=gene4273;Dbxref=ASAP:ABE-0013689,UniProtKB/Swiss-Prot:P0AF78,Genbank:NP_418603.1,EcoGene:EG12485,GeneID:948703;Name=NP_418603.1;Note=putative alpha helical protein;gbkey=CDS;gene=yjfJ;product=PspA/IM30 family protein;protein_id=NP_418603.1;transl_table=11 NC_000913.3 RefSeq gene 4411302 4411961 . + . ID=gene4274;Dbxref=EcoGene:EG12486,GeneID:948702;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;gene_synonym=ECK4179,JW4141;locus_tag=b4183 NC_000913.3 RefSeq CDS 4411302 4411961 . + 0 ID=cds4101;Parent=gene4274;Dbxref=ASAP:ABE-0013692,UniProtKB/Swiss-Prot:P39293,Genbank:NP_418604.1,EcoGene:EG12486,GeneID:948702;Name=NP_418604.1;gbkey=CDS;gene=yjfK;product=DUF2491 family protein;protein_id=NP_418604.1;transl_table=11 NC_000913.3 RefSeq gene 4411979 4412377 . + . ID=gene4275;Dbxref=EcoGene:EG12487,GeneID:948701;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;gene_synonym=ECK4180,JW4142;locus_tag=b4184 NC_000913.3 RefSeq CDS 4411979 4412377 . + 0 ID=cds4102;Parent=gene4275;Dbxref=ASAP:ABE-0013694,UniProtKB/Swiss-Prot:P0AF80,Genbank:NP_418605.1,EcoGene:EG12487,GeneID:948701;Name=NP_418605.1;gbkey=CDS;gene=yjfL;product=UPF0719 family inner membrane protein;protein_id=NP_418605.1;transl_table=11 NC_000913.3 RefSeq gene 4412387 4413025 . + . ID=gene4276;Dbxref=EcoGene:EG12488,GeneID:948700;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;gene_synonym=ECK4181,JW4143;locus_tag=b4185 NC_000913.3 RefSeq CDS 4412387 4413025 . + 0 ID=cds4103;Parent=gene4276;Dbxref=ASAP:ABE-0013696,UniProtKB/Swiss-Prot:P39295,Genbank:NP_418606.1,EcoGene:EG12488,GeneID:948700;Name=NP_418606.1;gbkey=CDS;gene=yjfM;product=DUF1190 family protein;protein_id=NP_418606.1;transl_table=11 NC_000913.3 RefSeq gene 4413028 4414191 . + . ID=gene4277;Dbxref=EcoGene:EG11812,GeneID:948699;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;gene_synonym=ECK4182,JW4144;locus_tag=b4186 NC_000913.3 RefSeq CDS 4413028 4414191 . + 0 ID=cds4104;Parent=gene4277;Dbxref=ASAP:ABE-0013698,UniProtKB/Swiss-Prot:P33222,Genbank:NP_418607.1,EcoGene:EG11812,GeneID:948699;Name=NP_418607.1;Note=putative synthetase/amidase;gbkey=CDS;gene=yjfC;product=ATP-Grasp family ATPase;protein_id=NP_418607.1;transl_table=11 NC_000913.3 RefSeq gene 4414275 4415900 . + . ID=gene4278;Dbxref=EcoGene:EG11811,GeneID:948710;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;gene_synonym=ECK4183,JW5867;locus_tag=b4187 NC_000913.3 RefSeq CDS 4414275 4415900 . + 0 ID=cds4105;Parent=gene4278;Dbxref=ASAP:ABE-0013701,UniProtKB/Swiss-Prot:P33224,Genbank:NP_418608.6,EcoGene:EG11811,GeneID:948710;Name=NP_418608.6;Note=putative acyl coenzyme A dehydrogenase;gbkey=CDS;gene=aidB;product=DNA alkylation damage repair protein%3B flavin-containing DNA binding protein%2C weak isovaleryl CoA dehydrogenase;protein_id=NP_418608.6;transl_table=11 NC_000913.3 RefSeq repeat_region 4415958 4415991 . + . ID=id558;Note=REP332 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4416017 4416292 . - . ID=gene4279;Dbxref=EcoGene:EG12521,GeneID:948709;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;gene_synonym=ECK4184,JW5742;locus_tag=b4188 NC_000913.3 RefSeq CDS 4416017 4416292 . - 0 ID=cds4106;Parent=gene4279;Dbxref=ASAP:ABE-0013704,UniProtKB/Swiss-Prot:P0AF82,Genbank:NP_418609.4,EcoGene:EG12521,GeneID:948709;Name=NP_418609.4;gbkey=CDS;gene=yjfN;product=DUF1471 family periplasmic protein;protein_id=NP_418609.4;transl_table=11 NC_000913.3 RefSeq gene 4416441 4416770 . - . ID=gene4280;Dbxref=EcoGene:EG12489,GeneID:948708;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;gene_synonym=ECK4185,JW5743,yjfO;locus_tag=b4189 NC_000913.3 RefSeq CDS 4416441 4416770 . - 0 ID=cds4107;Parent=gene4280;Dbxref=ASAP:ABE-0013706,UniProtKB/Swiss-Prot:P39297,Genbank:NP_418610.4,EcoGene:EG12489,GeneID:948708;Name=NP_418610.4;gbkey=CDS;gene=bsmA;product=bioflm peroxide resistance protein;protein_id=NP_418610.4;transl_table=11 NC_000913.3 RefSeq gene 4416952 4417701 . + . ID=gene4281;Dbxref=EcoGene:EG12490,GeneID:948707;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;gene_synonym=ECK4186,JW4148;locus_tag=b4190 NC_000913.3 RefSeq CDS 4416952 4417701 . + 0 ID=cds4108;Parent=gene4281;Dbxref=ASAP:ABE-0013711,UniProtKB/Swiss-Prot:P39298,Genbank:NP_418611.1,EcoGene:EG12490,GeneID:948707;Name=NP_418611.1;gbkey=CDS;gene=yjfP;product=acyl CoA esterase;protein_id=NP_418611.1;transl_table=11 NC_000913.3 RefSeq gene 4417698 4418453 . - . ID=gene4282;Dbxref=EcoGene:EG12491,GeneID:948706;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;gene_synonym=ECK4187,JW4149,yjfQ;locus_tag=b4191 NC_000913.3 RefSeq CDS 4417698 4418453 . - 0 ID=cds4109;Parent=gene4282;Dbxref=ASAP:ABE-0013713,UniProtKB/Swiss-Prot:P0A9W0,Genbank:NP_418612.1,EcoGene:EG12491,GeneID:948706;Name=NP_418612.1;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=ulaR;product=transcriptional repressor for the L-ascorbate utilization divergent operon;protein_id=NP_418612.1;transl_table=11 NC_000913.3 RefSeq gene 4418561 4419625 . - . ID=gene4283;Dbxref=EcoGene:EG12492,GeneID:948705;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;gene_synonym=ECK4188,JW5868,yjfR;locus_tag=b4192 NC_000913.3 RefSeq CDS 4418561 4419625 . - 0 ID=cds4110;Parent=gene4283;Dbxref=ASAP:ABE-0013717,UniProtKB/Swiss-Prot:P39300,Genbank:NP_418613.2,EcoGene:EG12492,GeneID:948705;Name=NP_418613.2;gbkey=CDS;gene=ulaG;product=L-ascorbate 6-phosphate lactonase;protein_id=NP_418613.2;transl_table=11 NC_000913.3 RefSeq gene 4419980 4421377 . + . ID=gene4284;Dbxref=EcoGene:EG12493,GeneID:948717;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=ECK4189,JW5744,sgaT,yjfS;locus_tag=b4193 NC_000913.3 RefSeq CDS 4419980 4421377 . + 0 ID=cds4111;Parent=gene4284;Dbxref=ASAP:ABE-0013723,UniProtKB/Swiss-Prot:P39301,Genbank:NP_418614.4,EcoGene:EG12493,GeneID:948717;Name=NP_418614.4;gbkey=CDS;gene=ulaA;product=L-ascorbate-specific enzyme IIC permease component of PTS;protein_id=NP_418614.4;transl_table=11 NC_000913.3 RefSeq gene 4421393 4421698 . + . ID=gene4285;Dbxref=EcoGene:EG12494,GeneID:948716;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;gene_synonym=ECK4190,JW4152,sgaB,yjfT;locus_tag=b4194 NC_000913.3 RefSeq CDS 4421393 4421698 . + 0 ID=cds4112;Parent=gene4285;Dbxref=ASAP:ABE-0013725,UniProtKB/Swiss-Prot:P69822,Genbank:NP_418615.1,EcoGene:EG12494,GeneID:948716;Name=NP_418615.1;gbkey=CDS;gene=ulaB;product=L-ascorbate-specific enzyme IIB component of PTS;protein_id=NP_418615.1;transl_table=11 NC_000913.3 RefSeq gene 4421708 4422172 . + . ID=gene4286;Dbxref=EcoGene:EG12495,GeneID:948715;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;gene_synonym=ECK4191,JW4153,ptxA,sgaA,yjfU;locus_tag=b4195 NC_000913.3 RefSeq CDS 4421708 4422172 . + 0 ID=cds4113;Parent=gene4286;Dbxref=ASAP:ABE-0013727,UniProtKB/Swiss-Prot:P69820,Genbank:NP_418616.1,EcoGene:EG12495,GeneID:948715;Name=NP_418616.1;Note=putative PTS system enzyme II A component;gbkey=CDS;gene=ulaC;product=L-ascorbate-specific enzyme IIA component of PTS;protein_id=NP_418616.1;transl_table=11 NC_000913.3 RefSeq gene 4422186 4422836 . + . ID=gene4287;Dbxref=EcoGene:EG12496,GeneID:948714;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;gene_synonym=ECK4192,JW4154,sgaH,yjfV;locus_tag=b4196 NC_000913.3 RefSeq CDS 4422186 4422836 . + 0 ID=cds4114;Parent=gene4287;Dbxref=ASAP:ABE-0013729,UniProtKB/Swiss-Prot:P39304,Genbank:NP_418617.1,EcoGene:EG12496,GeneID:948714;Name=NP_418617.1;Note=probable hexulose-6-phosphate synthase;gbkey=CDS;gene=ulaD;product=3-keto-L-gulonate 6-phosphate decarboxylase;protein_id=NP_418617.1;transl_table=11 NC_000913.3 RefSeq gene 4422846 4423700 . + . ID=gene4288;Dbxref=EcoGene:EG12497,GeneID:948712;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;gene_synonym=ECK4193,JW4155,sgaU,yjfW;locus_tag=b4197 NC_000913.3 RefSeq CDS 4422846 4423700 . + 0 ID=cds4115;Parent=gene4288;Dbxref=ASAP:ABE-0013732,UniProtKB/Swiss-Prot:P39305,Genbank:NP_418618.1,EcoGene:EG12497,GeneID:948712;Name=NP_418618.1;Note=putative hexulose-6-phosphate isomerase;gbkey=CDS;gene=ulaE;product=L-xylulose 5-phosphate 3-epimerase;protein_id=NP_418618.1;transl_table=11 NC_000913.3 RefSeq gene 4423700 4424386 . + . ID=gene4289;Dbxref=EcoGene:EG12498,GeneID:948711;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;gene_synonym=ECK4194,JW4156,sgaE,yjfX;locus_tag=b4198 NC_000913.3 RefSeq CDS 4423700 4424386 . + 0 ID=cds4116;Parent=gene4289;Dbxref=ASAP:ABE-0013734,UniProtKB/Swiss-Prot:P39306,Genbank:NP_418619.1,EcoGene:EG12498,GeneID:948711;Name=NP_418619.1;Note=putative epimerase/aldolase;gbkey=CDS;gene=ulaF;product=L-ribulose 5-phosphate 4-epimerase;protein_id=NP_418619.1;transl_table=11 NC_000913.3 RefSeq gene 4424516 4424791 . - . ID=gene4290;Dbxref=EcoGene:EG12499,GeneID:948713;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;gene_synonym=ECK4195,JW4157;locus_tag=b4199 NC_000913.3 RefSeq CDS 4424516 4424791 . - 0 ID=cds4117;Parent=gene4290;Dbxref=ASAP:ABE-0013736,UniProtKB/Swiss-Prot:P0AF86,Genbank:NP_418620.1,EcoGene:EG12499,GeneID:948713;Name=NP_418620.1;gbkey=CDS;gene=yjfY;product=YhcN family protein%2C periplasmic;protein_id=NP_418620.1;transl_table=11 NC_000913.3 RefSeq gene 4425118 4425513 . + . ID=gene4291;Dbxref=EcoGene:EG10905,GeneID:948723;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;gene_synonym=ECK4196,JW4158,sdgH;locus_tag=b4200 NC_000913.3 RefSeq CDS 4425118 4425513 . + 0 ID=cds4118;Parent=gene4291;Dbxref=ASAP:ABE-0013740,UniProtKB/Swiss-Prot:P02358,Genbank:NP_418621.5,EcoGene:EG10905,GeneID:948723;Name=NP_418621.5;gbkey=CDS;gene=rpsF;product=30S ribosomal subunit protein S6;protein_id=NP_418621.5;transl_table=11 NC_000913.3 RefSeq gene 4425520 4425834 . + . ID=gene4292;Dbxref=EcoGene:EG10764,GeneID:948722;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;gene_synonym=ECK4197,JW4159;locus_tag=b4201 NC_000913.3 RefSeq CDS 4425520 4425834 . + 0 ID=cds4119;Parent=gene4292;Dbxref=ASAP:ABE-0013742,UniProtKB/Swiss-Prot:P07013,Genbank:NP_418622.1,EcoGene:EG10764,GeneID:948722;Name=NP_418622.1;Note=primosomal replication protein N;gbkey=CDS;gene=priB;product=primosomal protein N;protein_id=NP_418622.1;transl_table=11 NC_000913.3 RefSeq gene 4425839 4426066 . + . ID=gene4293;Dbxref=EcoGene:EG10917,GeneID:948721;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;gene_synonym=ECK4198,JW4160;locus_tag=b4202 NC_000913.3 RefSeq CDS 4425839 4426066 . + 0 ID=cds4120;Parent=gene4293;Dbxref=ASAP:ABE-0013744,UniProtKB/Swiss-Prot:P0A7T7,Genbank:NP_418623.1,EcoGene:EG10917,GeneID:948721;Name=NP_418623.1;gbkey=CDS;gene=rpsR;product=30S ribosomal subunit protein S18;protein_id=NP_418623.1;transl_table=11 NC_000913.3 RefSeq gene 4426108 4426557 . + . ID=gene4294;Dbxref=EcoGene:EG10870,GeneID:948720;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;gene_synonym=ECK4199,JW4161;locus_tag=b4203 NC_000913.3 RefSeq CDS 4426108 4426557 . + 0 ID=cds4121;Parent=gene4294;Dbxref=ASAP:ABE-0013746,UniProtKB/Swiss-Prot:P0A7R1,Genbank:NP_418624.1,EcoGene:EG10870,GeneID:948720;Name=NP_418624.1;gbkey=CDS;gene=rplI;product=50S ribosomal subunit protein L9;protein_id=NP_418624.1;transl_table=11 NC_000913.3 RefSeq gene 4426628 4427422 . - . ID=gene4295;Dbxref=EcoGene:EG12500,GeneID:948719;Name=yjfZ;gbkey=Gene;gene=yjfZ;gene_biotype=protein_coding;gene_synonym=ECK4200,JW4162;locus_tag=b4204 NC_000913.3 RefSeq CDS 4426628 4427422 . - 0 ID=cds4122;Parent=gene4295;Dbxref=ASAP:ABE-0013748,UniProtKB/Swiss-Prot:P39308,Genbank:NP_418625.1,EcoGene:EG12500,GeneID:948719;Name=NP_418625.1;gbkey=CDS;gene=yjfZ;product=uncharacterized protein;protein_id=NP_418625.1;transl_table=11 NC_000913.3 RefSeq gene 4427694 4428095 . + . ID=gene4296;Dbxref=EcoGene:EG12501,GeneID:948718;Name=ytfA;gbkey=Gene;gene=ytfA;gene_biotype=pseudogene;gene_synonym=ECK4201,JW4163;locus_tag=b4205;pseudo=true NC_000913.3 RefSeq CDS 4427694 4428095 . + 0 ID=cds4123;Parent=gene4296;Dbxref=ASAP:ABE-0013754,UniProtKB/Swiss-Prot:P39309,EcoGene:EG12501,GeneID:948718;Note=pseudogene%2C related to transcriptional regulators;gbkey=CDS;gene=ytfA;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4428079 4428717 . - . ID=gene4297;Dbxref=EcoGene:EG12502,GeneID:948727;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;gene_synonym=ECK4202,JW5745;locus_tag=b4206 NC_000913.3 RefSeq CDS 4428079 4428717 . - 0 ID=cds4124;Parent=gene4297;Dbxref=ASAP:ABE-0013756,UniProtKB/Swiss-Prot:P39310,Genbank:NP_418627.4,EcoGene:EG12502,GeneID:948727;Name=NP_418627.4;gbkey=CDS;gene=ytfB;product=OapA family protein;protein_id=NP_418627.4;transl_table=11 NC_000913.3 RefSeq gene 4428935 4429555 . + . ID=gene4298;Dbxref=EcoGene:EG12503,GeneID:948726;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;gene_synonym=ECK4203,JW5746,ytfC;locus_tag=b4207 NC_000913.3 RefSeq CDS 4428935 4429555 . + 0 ID=cds4125;Parent=gene4298;Dbxref=ASAP:ABE-0013759,UniProtKB/Swiss-Prot:P0A9L3,Genbank:NP_418628.4,EcoGene:EG12503,GeneID:948726;Name=NP_418628.4;Note=FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase);gbkey=CDS;gene=fklB;product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase);protein_id=NP_418628.4;transl_table=11 NC_000913.3 RefSeq gene 4429864 4431276 . + . ID=gene4299;Dbxref=EcoGene:EG12504,GeneID:948725;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA,ECK4204,JW4166,ytfD;locus_tag=b4208 NC_000913.3 RefSeq CDS 4429864 4431276 . + 0 ID=cds4126;Parent=gene4299;Dbxref=ASAP:ABE-0013764,UniProtKB/Swiss-Prot:P0AAE0,Genbank:NP_418629.1,EcoGene:EG12504,GeneID:948725;Name=NP_418629.1;Note=transport of D-alanine%2C D-serine%2C and glycine;gbkey=CDS;gene=cycA;product=D-alanine/D-serine/glycine transporter;protein_id=NP_418629.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4431289 4431313 . + . ID=id559;Note=REP333 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4431321 4431983 . - . ID=gene4300;Dbxref=EcoGene:EG12505,GeneID:948724;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;gene_synonym=dnrN,ECK4205,JW4167;locus_tag=b4209 NC_000913.3 RefSeq CDS 4431321 4431983 . - 0 ID=cds4127;Parent=gene4300;Dbxref=ASAP:ABE-0013766,UniProtKB/Swiss-Prot:P69506,Genbank:NP_418630.1,EcoGene:EG12505,GeneID:948724;Name=NP_418630.1;gbkey=CDS;gene=ytfE;product=iron-sulfur cluster repair protein RIC;protein_id=NP_418630.1;transl_table=11 NC_000913.3 RefSeq gene 4432091 4433056 . - . ID=gene4301;Dbxref=EcoGene:EG12506,GeneID:948732;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;gene_synonym=ECK4206,JW4168;locus_tag=b4210 NC_000913.3 RefSeq CDS 4432091 4433056 . - 0 ID=cds4128;Parent=gene4301;Dbxref=ASAP:ABE-0013769,UniProtKB/Swiss-Prot:P39314,Genbank:NP_418631.2,EcoGene:EG12506,GeneID:948732;Name=NP_418631.2;Note=putative transmembrane subunit;gbkey=CDS;gene=ytfF;product=DMT transporter family inner membrane protein;protein_id=NP_418631.2;transl_table=11 NC_000913.3 RefSeq gene 4433164 4434024 . - . ID=gene4302;Dbxref=EcoGene:EG12507,GeneID:948731;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;gene_synonym=ECK4207,JW4169,qor2,ytfG;locus_tag=b4211 NC_000913.3 RefSeq CDS 4433164 4434024 . - 0 ID=cds4129;Parent=gene4302;Dbxref=ASAP:ABE-0013773,UniProtKB/Swiss-Prot:P39315,Genbank:NP_418632.1,EcoGene:EG12507,GeneID:948731;Name=NP_418632.1;Note=putative oxidoreductase;gbkey=CDS;gene=qorB;product=NAD(P)H:quinone oxidoreductase;protein_id=NP_418632.1;transl_table=11 NC_000913.3 RefSeq gene 4434113 4434493 . + . ID=gene4303;Dbxref=EcoGene:EG12508,GeneID:948730;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;gene_synonym=ECK4208,JW5747;locus_tag=b4212 NC_000913.3 RefSeq CDS 4434113 4434493 . + 0 ID=cds4130;Parent=gene4303;Dbxref=ASAP:ABE-0013777,UniProtKB/Swiss-Prot:P0ACN2,Genbank:NP_418633.4,EcoGene:EG12508,GeneID:948730;Name=NP_418633.4;gbkey=CDS;gene=ytfH;product=DUF24 family HxlR-type putative transcriptional regulator;protein_id=NP_418633.4;transl_table=11 NC_000913.3 RefSeq repeat_region 4434496 4434606 . + . ID=id560;Note=REP334 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4434622 4436565 . - . ID=gene4304;Dbxref=EcoGene:EG10160,GeneID:948729;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;gene_synonym=ECK4209,JW4171;locus_tag=b4213 NC_000913.3 RefSeq CDS 4434622 4436565 . - 0 ID=cds4131;Parent=gene4304;Dbxref=ASAP:ABE-0013782,UniProtKB/Swiss-Prot:P08331,Genbank:NP_418634.1,EcoGene:EG10160,GeneID:948729;Name=NP_418634.1;gbkey=CDS;gene=cpdB;product=2':3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=NP_418634.1;transl_table=11 NC_000913.3 RefSeq gene 4436755 4437495 . + . ID=gene4305;Dbxref=EcoGene:EG10043,GeneID:948728;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;gene_synonym=amt,amtA,ECK4210,JW4172;locus_tag=b4214 NC_000913.3 RefSeq CDS 4436755 4437495 . + 0 ID=cds4132;Parent=gene4305;Dbxref=ASAP:ABE-0013786,UniProtKB/Swiss-Prot:P22255,Genbank:NP_418635.1,EcoGene:EG10043,GeneID:948728;Name=NP_418635.1;Note=affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis;gbkey=CDS;gene=cysQ;product=3'(2')%2C5'-bisphosphate nucleotidase;protein_id=NP_418635.1;transl_table=11 NC_000913.3 RefSeq gene 4437707 4438645 . + . ID=gene4306;Dbxref=EcoGene:EG12509,GeneID:948738;Name=ytfI;gbkey=Gene;gene=ytfI;gene_biotype=protein_coding;gene_synonym=ECK4211,JW5748;locus_tag=b4215 NC_000913.3 RefSeq CDS 4437707 4438645 . + 0 ID=cds4133;Parent=gene4306;Dbxref=ASAP:ABE-0013790,UniProtKB/Swiss-Prot:P39317,Genbank:YP_026285.1,EcoGene:EG12509,GeneID:948738;Name=YP_026285.1;gbkey=CDS;gene=ytfI;product=uncharacterized protein;protein_id=YP_026285.1;transl_table=11 NC_000913.3 RefSeq gene 4438708 4439262 . - . ID=gene4307;Dbxref=EcoGene:EG12510,GeneID:948737;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;gene_synonym=ecfJ,ECK4212,JW4175;locus_tag=b4216 NC_000913.3 RefSeq CDS 4438708 4439262 . - 0 ID=cds4134;Parent=gene4307;Dbxref=ASAP:ABE-0013792,UniProtKB/Swiss-Prot:P39187,Genbank:NP_418637.1,EcoGene:EG12510,GeneID:948737;Name=NP_418637.1;gbkey=CDS;gene=ytfJ;product=putative transcriptional regulator;protein_id=NP_418637.1;transl_table=11 NC_000913.3 RefSeq gene 4439587 4439793 . + . ID=gene4308;Dbxref=EcoGene:EG12511,GeneID:948736;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;gene_synonym=ECK4213,JW5749;locus_tag=b4217 NC_000913.3 RefSeq CDS 4439587 4439793 . + 0 ID=cds4135;Parent=gene4308;Dbxref=ASAP:ABE-0013797,UniProtKB/Swiss-Prot:P0ADE2,Genbank:NP_418638.2,EcoGene:EG12511,GeneID:948736;Name=NP_418638.2;gbkey=CDS;gene=ytfK;product=DUF1107 family protein;protein_id=NP_418638.2;transl_table=11 NC_000913.3 RefSeq gene 4439872 4441215 . - . ID=gene4309;Dbxref=EcoGene:EG12512,GeneID:948735;Name=ytfL;gbkey=Gene;gene=ytfL;gene_biotype=protein_coding;gene_synonym=ECK4214,JW4177;locus_tag=b4218 NC_000913.3 RefSeq CDS 4439872 4441215 . - 0 ID=cds4136;Parent=gene4309;Dbxref=ASAP:ABE-0013799,UniProtKB/Swiss-Prot:P0AE45,Genbank:NP_418639.1,EcoGene:EG12512,GeneID:948735;Name=NP_418639.1;Note=putative transport protein;gbkey=CDS;gene=ytfL;product=UPF0053 family inner membrane protein;protein_id=NP_418639.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4441393 4441490 . + . ID=id561;Note=RIP335 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4441538 4442176 . - . ID=gene4310;Dbxref=EcoGene:EG11433,GeneID:948734;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;gene_synonym=ECK4215,JW4178,pms,pmsR;locus_tag=b4219 NC_000913.3 RefSeq CDS 4441538 4442176 . - 0 ID=cds4137;Parent=gene4310;Dbxref=ASAP:ABE-0013804,UniProtKB/Swiss-Prot:P0A744,Genbank:NP_418640.1,EcoGene:EG11433,GeneID:948734;Name=NP_418640.1;Note=peptide methionine sulfoxide reductase;gbkey=CDS;gene=msrA;product=methionine sulfoxide reductase A;protein_id=NP_418640.1;transl_table=11 NC_000913.3 RefSeq gene 4442382 4444115 . + . ID=gene4311;Dbxref=EcoGene:EG12513,GeneID:948733;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;gene_synonym=ECK4216,JW4179,yftM,ytfM;locus_tag=b4220 NC_000913.3 RefSeq CDS 4442382 4444115 . + 0 ID=cds4138;Parent=gene4311;Dbxref=ASAP:ABE-0013809,UniProtKB/Swiss-Prot:P0ADE4,Genbank:NP_418641.1,EcoGene:EG12513,GeneID:948733;Name=NP_418641.1;gbkey=CDS;gene=tamA;product=translocation and assembly module for autotransporter export%2C outer membrane subunit;protein_id=NP_418641.1;transl_table=11 NC_000913.3 RefSeq gene 4444112 4447891 . + . ID=gene4312;Dbxref=EcoGene:EG12514,GeneID:948742;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;gene_synonym=ECK4217,JW4180,ytfN,ytfO;locus_tag=b4221 NC_000913.3 RefSeq CDS 4444112 4447891 . + 0 ID=cds4139;Parent=gene4312;Dbxref=ASAP:ABE-0013811,UniProtKB/Swiss-Prot:P39321,Genbank:NP_418642.1,EcoGene:EG12514,GeneID:948742;Name=NP_418642.1;gbkey=CDS;gene=tamB;product=translocation and assembly module for autotransporter export%2C inner membrane subunit;protein_id=NP_418642.1;transl_table=11 NC_000913.3 RefSeq gene 4447894 4448235 . + . ID=gene4313;Dbxref=EcoGene:EG12516,GeneID:948741;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;gene_synonym=ECK4218,JW4181;locus_tag=b4222 NC_000913.3 RefSeq CDS 4447894 4448235 . + 0 ID=cds4140;Parent=gene4313;Dbxref=ASAP:ABE-0013814,UniProtKB/Swiss-Prot:P0AE48,Genbank:NP_418643.1,EcoGene:EG12516,GeneID:948741;Name=NP_418643.1;gbkey=CDS;gene=ytfP;product=GGCT-like protein;protein_id=NP_418643.1;transl_table=11 NC_000913.3 RefSeq gene 4448447 4448698 . + . ID=gene4314;Dbxref=EcoGene:EG11250,GeneID:948739;Name=chpS;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;gene_synonym=chpBI,ECK4220,JW5750,yjfB;locus_tag=b4224 NC_000913.3 RefSeq CDS 4448447 4448698 . + 0 ID=cds4141;Parent=gene4314;Dbxref=ASAP:ABE-0013820,UniProtKB/Swiss-Prot:P08365,Genbank:NP_418645.2,EcoGene:EG11250,GeneID:948739;Name=NP_418645.2;Note=suppressor of inhibitory function of ChpB%2C PemI-like%2C autoregulated;gbkey=CDS;gene=chpS;product=antitoxin of the ChpBS toxin-antitoxin system;protein_id=NP_418645.2;transl_table=11 NC_000913.3 RefSeq gene 4448692 4449042 . + . ID=gene4315;Dbxref=EcoGene:EG12096,GeneID:948747;Name=chpB;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;gene_synonym=chpBK,ECK4221,JW4184,yjfE;locus_tag=b4225 NC_000913.3 RefSeq CDS 4448692 4449042 . + 0 ID=cds4142;Parent=gene4315;Dbxref=ASAP:ABE-0013822,UniProtKB/Swiss-Prot:P33647,Genbank:NP_418646.1,EcoGene:EG12096,GeneID:948747;Name=NP_418646.1;Note=probable growth inhibitor%2C PemK-like%2C autoregulated;gbkey=CDS;gene=chpB;product=toxin of the ChpB-ChpS toxin-antitoxin system;protein_id=NP_418646.1;transl_table=11 NC_000913.3 RefSeq gene 4449122 4449652 . - . ID=gene4316;Dbxref=EcoGene:EG10755,GeneID:948748;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;gene_synonym=ECK4222,JW4185;locus_tag=b4226 NC_000913.3 RefSeq CDS 4449122 4449652 . - 0 ID=cds4143;Parent=gene4316;Dbxref=ASAP:ABE-0013824,UniProtKB/Swiss-Prot:P0A7A9,Genbank:NP_418647.1,EcoGene:EG10755,GeneID:948748;Name=NP_418647.1;gbkey=CDS;gene=ppa;product=inorganic pyrophosphatase;protein_id=NP_418647.1;transl_table=11 NC_000913.3 RefSeq gene 4449962 4450918 . + . ID=gene4317;Dbxref=EcoGene:EG12517,GeneID:948746;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;gene_synonym=ECK4223,JW4186;locus_tag=b4227 NC_000913.3 RefSeq CDS 4449962 4450918 . + 0 ID=cds4144;Parent=gene4317;Dbxref=ASAP:ABE-0013829,UniProtKB/Swiss-Prot:P39325,Genbank:NP_418648.1,EcoGene:EG12517,GeneID:948746;Name=NP_418648.1;Note=putative LACI-type transcriptional regulator;gbkey=CDS;gene=ytfQ;product=galactofuranose ABC transporter periplasmic binding protein;protein_id=NP_418648.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4450944 4451028 . + . ID=id562;Note=REP336 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4451058 4452560 . + . ID=gene4318;Dbxref=EcoGene:EG12518,GeneID:2847725;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;gene_synonym=ECK4224,JW5752,ytfS;locus_tag=b4485 NC_000913.3 RefSeq CDS 4451058 4452560 . + 0 ID=cds4145;Parent=gene4318;Dbxref=ASAP:ABE-0174118,UniProtKB/Swiss-Prot:Q6BEX0,Genbank:YP_026286.1,EcoGene:EG12518,GeneID:2847725;Name=YP_026286.1;Note=putative sugar transport protein (ABC superfamily%2C atp_bind);gbkey=CDS;gene=ytfR;product=putative sugar ABC transporter ATPase;protein_id=YP_026286.1;transl_table=11 NC_000913.3 RefSeq gene 4452571 4453596 . + . ID=gene4319;Dbxref=EcoGene:EG12520,GeneID:948743;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;gene_synonym=ECK4225,JW5753;locus_tag=b4230 NC_000913.3 RefSeq CDS 4452571 4453596 . + 0 ID=cds4146;Parent=gene4319;Dbxref=ASAP:ABE-0013838,UniProtKB/Swiss-Prot:P39328,Genbank:NP_418651.3,EcoGene:EG12520,GeneID:948743;Name=NP_418651.3;Note=putative transport system permease protein;gbkey=CDS;gene=ytfT;product=putative sugar ABC transporter permease;protein_id=NP_418651.3;transl_table=11 NC_000913.3 RefSeq gene 4453583 4454578 . + . ID=gene4320;Dbxref=EcoGene:EG12439,GeneID:948754;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;gene_synonym=ECK4226,JW5754;locus_tag=b4231 NC_000913.3 RefSeq CDS 4453583 4454578 . + 0 ID=cds4147;Parent=gene4320;Dbxref=ASAP:ABE-0013840,UniProtKB/Swiss-Prot:P37772,Genbank:NP_418652.2,EcoGene:EG12439,GeneID:948754;Name=NP_418652.2;Note=putative transport system permease protein;gbkey=CDS;gene=yjfF;product=putative sugar ABC transporter permease;protein_id=NP_418652.2;transl_table=11 NC_000913.3 RefSeq gene 4454611 4455609 . - . ID=gene4321;Dbxref=EcoGene:EG10283,GeneID:948753;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;gene_synonym=ECK4227,fdp,JW4191;locus_tag=b4232 NC_000913.3 RefSeq CDS 4454611 4455609 . - 0 ID=cds4148;Parent=gene4321;Dbxref=ASAP:ABE-0013842,UniProtKB/Swiss-Prot:P0A993,Genbank:NP_418653.1,EcoGene:EG10283,GeneID:948753;Name=NP_418653.1;gbkey=CDS;gene=fbp;product=fructose-1%2C6-bisphosphatase I;protein_id=NP_418653.1;transl_table=11 NC_000913.3 RefSeq gene 4455785 4457158 . + . ID=gene4322;Dbxref=EcoGene:EG12440,GeneID:948752;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;gene_synonym=ECK4228,JW4192,tpl,yjfG;locus_tag=b4233 NC_000913.3 RefSeq CDS 4455785 4457158 . + 0 ID=cds4149;Parent=gene4322;Dbxref=ASAP:ABE-0013847,UniProtKB/Swiss-Prot:P37773,Genbank:NP_418654.1,EcoGene:EG12440,GeneID:948752;Name=NP_418654.1;gbkey=CDS;gene=mpl;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=NP_418654.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4457185 4457268 . + . ID=id563;Note=REP337 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4457314 4457865 . - . ID=gene4323;Dbxref=EcoGene:EG11410,GeneID:948751;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;gene_synonym=ECK4229,JW4193;locus_tag=b4234 NC_000913.3 RefSeq CDS 4457314 4457865 . - 0 ID=cds4150;Parent=gene4323;Dbxref=ASAP:ABE-0013850,UniProtKB/Swiss-Prot:P0A8X0,Genbank:NP_418655.1,EcoGene:EG11410,GeneID:948751;Name=NP_418655.1;Note=putative alpha helix protein;gbkey=CDS;gene=yjgA;product=ribosome-associated UPF0307 family protein;protein_id=NP_418655.1;transl_table=11 NC_000913.3 RefSeq gene 4457959 4459311 . + . ID=gene4324;Dbxref=EcoGene:EG10741,GeneID:948750;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=ECK4230,JW4194,mcb,tldE;locus_tag=b4235 NC_000913.3 RefSeq CDS 4457959 4459311 . + 0 ID=cds4151;Parent=gene4324;Dbxref=ASAP:ABE-0013854,UniProtKB/Swiss-Prot:P0AFK0,Genbank:NP_418656.1,EcoGene:EG10741,GeneID:948750;Name=NP_418656.1;Note=maturation of antibiotic MccB17%2C see tld genes;gbkey=CDS;gene=pmbA;product=putative antibiotic peptide MccB17 maturation peptidase;protein_id=NP_418656.1;transl_table=11 NC_000913.3 RefSeq gene 4459490 4459855 . + . ID=gene4325;Dbxref=EcoGene:EG50008,GeneID:948758;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=pseudogene;gene_synonym=ECK4231,JW4195;locus_tag=b4236;pseudo=true NC_000913.3 RefSeq CDS 4459490 4459855 . + 0 ID=cds4152;Parent=gene4325;Dbxref=ASAP:ABE-0013858,UniProtKB/Swiss-Prot:P0ABE7,EcoGene:EG50008,GeneID:948758;Note=pseudogene%2C truncated cytochrome b562~cytochrome b(562);gbkey=CDS;gene=cybC;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4459900 4460364 . - . ID=gene4326;Dbxref=EcoGene:EG12523,GeneID:948757;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;gene_synonym=ECK4232,JW4196,yjgE;locus_tag=b4237 NC_000913.3 RefSeq CDS 4459900 4460364 . - 0 ID=cds4153;Parent=gene4326;Dbxref=ASAP:ABE-0013860,UniProtKB/Swiss-Prot:P0A9N8,Genbank:NP_418658.1,EcoGene:EG12523,GeneID:948757;Name=NP_418658.1;gbkey=CDS;gene=nrdG;product=anaerobic ribonucleotide reductase activating protein;protein_id=NP_418658.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4460415 4460498 . + . ID=id564;Note=REP338 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4460522 4462660 . - . ID=gene4327;Dbxref=EcoGene:EG11417,GeneID:948755;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;gene_synonym=ECK4233,JW4197;locus_tag=b4238 NC_000913.3 RefSeq CDS 4460522 4462660 . - 0 ID=cds4154;Parent=gene4327;Dbxref=ASAP:ABE-0013865,UniProtKB/Swiss-Prot:P28903,Genbank:NP_418659.1,EcoGene:EG11417,GeneID:948755;Name=NP_418659.1;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=NP_418659.1;transl_table=11 NC_000913.3 RefSeq gene 4463054 4464709 . - . ID=gene4328;Dbxref=EcoGene:EG11402,GeneID:948762;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;gene_synonym=ECK4234,JW4198,olgH,treE;locus_tag=b4239 NC_000913.3 RefSeq CDS 4463054 4464709 . - 0 ID=cds4155;Parent=gene4328;Dbxref=ASAP:ABE-0013870,UniProtKB/Swiss-Prot:P28904,Genbank:NP_418660.1,EcoGene:EG11402,GeneID:948762;Name=NP_418660.1;Note=trehalase 6-P hydrolase;gbkey=CDS;gene=treC;product=trehalose-6-P hydrolase;protein_id=NP_418660.1;transl_table=11 NC_000913.3 RefSeq gene 4464759 4466180 . - . ID=gene4329;Dbxref=EcoGene:EG12127,GeneID:948761;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;gene_synonym=ECK4235,JW4199;locus_tag=b4240 NC_000913.3 RefSeq CDS 4464759 4466180 . - 0 ID=cds4156;Parent=gene4329;Dbxref=ASAP:ABE-0013872,UniProtKB/Swiss-Prot:P36672,Genbank:NP_418661.1,EcoGene:EG12127,GeneID:948761;Name=NP_418661.1;Note=PTS system enzyme II%2C trehalose specific;gbkey=CDS;gene=treB;product=trehalose-specific PTS enzyme: IIB and IIC component;protein_id=NP_418661.1;transl_table=11 NC_000913.3 RefSeq gene 4466299 4467246 . - . ID=gene4330;Dbxref=EcoGene:EG12202,GeneID:948760;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;gene_synonym=ECK4236,JW4200;locus_tag=b4241 NC_000913.3 RefSeq CDS 4466299 4467246 . - 0 ID=cds4157;Parent=gene4330;Dbxref=ASAP:ABE-0013875,UniProtKB/Swiss-Prot:P36673,Genbank:NP_418662.1,EcoGene:EG12202,GeneID:948760;Name=NP_418662.1;Note=repressor of treA%2CB%2CC;gbkey=CDS;gene=treR;product=trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor;protein_id=NP_418662.1;transl_table=11 NC_000913.3 RefSeq gene 4467431 4467484 . + . ID=gene4331;Dbxref=EcoGene:EG14498,GeneID:9797237;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;gene_synonym=ECK4513;locus_tag=b4702 NC_000913.3 RefSeq CDS 4467431 4467484 . + 0 ID=cds4158;Parent=gene4331;Dbxref=UniProtKB/Swiss-Prot:E2JKY7,Genbank:YP_003933616.1,EcoGene:EG14498,GeneID:9797237;Name=YP_003933616.1;gbkey=CDS;gene=mgtL;product=regulatory leader peptide for mgtA;protein_id=YP_003933616.1;transl_table=11 NC_000913.3 RefSeq gene 4467625 4470321 . + . ID=gene4332;Dbxref=EcoGene:EG12525,GeneID:948778;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;gene_synonym=corB,ECK4237,JW4201,mgt;locus_tag=b4242 NC_000913.3 RefSeq CDS 4467625 4470321 . + 0 ID=cds4159;Parent=gene4332;Dbxref=ASAP:ABE-0013883,UniProtKB/Swiss-Prot:P0ABB8,Genbank:NP_418663.1,EcoGene:EG12525,GeneID:948778;Name=NP_418663.1;Note=Mg2+ transport ATPase%2C P-type 1;gbkey=CDS;gene=mgtA;product=magnesium transporter;protein_id=NP_418663.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4470381 4470468 . + . ID=id565;Note=RIP339 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4470527 4470913 . - . ID=gene4333;Dbxref=EcoGene:EG12524,GeneID:948771;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;gene_synonym=ECK4238,JW5755,yjgF;locus_tag=b4243 NC_000913.3 RefSeq CDS 4470527 4470913 . - 0 ID=cds4160;Parent=gene4333;Dbxref=ASAP:ABE-0013886,UniProtKB/Swiss-Prot:P0AF93,Genbank:NP_418664.2,EcoGene:EG12524,GeneID:948771;Name=NP_418664.2;gbkey=CDS;gene=ridA;product=enamine/imine deaminase%2C reaction intermediate detoxification;protein_id=NP_418664.2;transl_table=11 NC_000913.3 RefSeq gene 4470986 4471447 . - . ID=gene4334;Dbxref=EcoGene:EG10811,GeneID:948763;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;gene_synonym=ECK4239,JW4203;locus_tag=b4244 NC_000913.3 RefSeq CDS 4470986 4471447 . - 0 ID=cds4161;Parent=gene4334;Dbxref=ASAP:ABE-0013889,UniProtKB/Swiss-Prot:P0A7F3,Genbank:NP_418665.1,EcoGene:EG10811,GeneID:948763;Name=NP_418665.1;gbkey=CDS;gene=pyrI;product=aspartate carbamoyltransferase%2C regulatory subunit;protein_id=NP_418665.1;transl_table=11 NC_000913.3 RefSeq gene 4471460 4472395 . - . ID=gene4335;Dbxref=EcoGene:EG10805,GeneID:948767;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;gene_synonym=ECK4240,JW4204;locus_tag=b4245 NC_000913.3 RefSeq CDS 4471460 4472395 . - 0 ID=cds4162;Parent=gene4335;Dbxref=ASAP:ABE-0013892,UniProtKB/Swiss-Prot:P0A786,Genbank:NP_418666.1,EcoGene:EG10805,GeneID:948767;Name=NP_418666.1;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase%2C catalytic subunit;protein_id=NP_418666.1;transl_table=11 NC_000913.3 RefSeq gene 4472399 4472533 . - . ID=gene4336;Dbxref=EcoGene:EG11279,GeneID:948768;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;gene_synonym=ECK4241,JW4205;locus_tag=b4246 NC_000913.3 RefSeq CDS 4472399 4472533 . - 0 ID=cds4163;Parent=gene4336;Dbxref=ASAP:ABE-0013899,UniProtKB/Swiss-Prot:P0AD83,Genbank:NP_418667.1,EcoGene:EG11279,GeneID:948768;Name=NP_418667.1;gbkey=CDS;gene=pyrL;product=pyrBI operon leader peptide;protein_id=NP_418667.1;transl_table=11 NC_000913.3 RefSeq gene 4472814 4473209 . - . ID=gene4337;Dbxref=EcoGene:EG12527,GeneID:948769;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;gene_synonym=ECK4242,JW4206;locus_tag=b4248 NC_000913.3 RefSeq CDS 4472814 4473209 . - 0 ID=cds4164;Parent=gene4337;Dbxref=ASAP:ABE-0013905,UniProtKB/Swiss-Prot:P39332,Genbank:NP_418669.1,EcoGene:EG12527,GeneID:948769;Name=NP_418669.1;gbkey=CDS;gene=yjgH;product=UPF0131 family protein;protein_id=NP_418669.1;transl_table=11 NC_000913.3 RefSeq gene 4473340 4474053 . - . ID=gene4338;Dbxref=EcoGene:EG12528,GeneID:948765;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;gene_synonym=ECK4243,JW4207,yjgI;locus_tag=b4249 NC_000913.3 RefSeq CDS 4473340 4474053 . - 0 ID=cds4165;Parent=gene4338;Dbxref=ASAP:ABE-0013909,UniProtKB/Swiss-Prot:P39333,Genbank:NP_418670.1,EcoGene:EG12528,GeneID:948765;Name=NP_418670.1;Note=putative oxidoreductase;gbkey=CDS;gene=bdcA;product=c-di-GMP-binding biofilm dispersal mediator protein;protein_id=NP_418670.1;transl_table=11 NC_000913.3 RefSeq gene 4474124 4474717 . + . ID=gene4339;Dbxref=EcoGene:EG12529,GeneID:948775;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;gene_synonym=ECK4244,JW4208,yjgJ;locus_tag=b4251 NC_000913.3 RefSeq CDS 4474124 4474717 . + 0 ID=cds4166;Parent=gene4339;Dbxref=ASAP:ABE-0013918,UniProtKB/Swiss-Prot:P39334,Genbank:NP_418672.4,EcoGene:EG12529,GeneID:948775;Name=NP_418672.4;gbkey=CDS;gene=bdcR;product=transcriptional repressor for divergent bdcA;protein_id=NP_418672.4;transl_table=11 NC_000913.3 RefSeq gene 4474862 4475314 . + . ID=gene4340;Dbxref=EcoGene:EG12530,GeneID:948777;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;gene_synonym=ECK4245,JW5756,yjgK;locus_tag=b4252 NC_000913.3 RefSeq CDS 4474862 4475314 . + 0 ID=cds4167;Parent=gene4340;Dbxref=ASAP:ABE-0013921,UniProtKB/Swiss-Prot:P0AF96,Genbank:NP_418673.4,EcoGene:EG12530,GeneID:948777;Name=NP_418673.4;gbkey=CDS;gene=tabA;product=biofilm modulator regulated by toxins%3B DUF386 family protein%2C cupin superfamily protein;protein_id=NP_418673.4;transl_table=11 NC_000913.3 RefSeq gene 4475437 4477251 . + . ID=gene4341;Dbxref=EcoGene:EG12531,GeneID:948776;Name=yjgL;gbkey=Gene;gene=yjgL;gene_biotype=protein_coding;gene_synonym=ECK4246,JW5757;locus_tag=b4253 NC_000913.3 RefSeq CDS 4475437 4477251 . + 0 ID=cds4168;Parent=gene4341;Dbxref=ASAP:ABE-0013925,UniProtKB/Swiss-Prot:P39336,Genbank:NP_418674.2,EcoGene:EG12531,GeneID:948776;Name=NP_418674.2;gbkey=CDS;gene=yjgL;product=SopA-central-domain-like hexapeptide repeat protein;protein_id=NP_418674.2;transl_table=11 NC_000913.3 RefSeq gene 4477307 4478311 . - . ID=gene4342;Dbxref=EcoGene:EG10069,GeneID:948774;Name=argI;gbkey=Gene;gene=argI;gene_biotype=protein_coding;gene_synonym=ECK4247,JW4211;locus_tag=b4254 NC_000913.3 RefSeq CDS 4477307 4478311 . - 0 ID=cds4169;Parent=gene4342;Dbxref=ASAP:ABE-0013927,UniProtKB/Swiss-Prot:P04391,Genbank:NP_418675.1,EcoGene:EG10069,GeneID:948774;Name=NP_418675.1;gbkey=CDS;gene=argI;product=ornithine carbamoyltransferase 1;protein_id=NP_418675.1;transl_table=11 NC_000913.3 RefSeq gene 4478473 4478889 . + . ID=gene4343;Dbxref=EcoGene:EG12453,GeneID:948773;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;gene_synonym=ECK4248,JW4212,yjgD;locus_tag=b4255 NC_000913.3 RefSeq CDS 4478473 4478889 . + 0 ID=cds4170;Parent=gene4343;Dbxref=ASAP:ABE-0013936,UniProtKB/Swiss-Prot:P0AF90,Genbank:NP_418676.1,EcoGene:EG12453,GeneID:948773;Name=NP_418676.1;gbkey=CDS;gene=rraB;product=protein inhibitor of RNase E;protein_id=NP_418676.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4478939 4478972 . + . ID=id566;Note=REP340 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4479034 4479537 . - . ID=gene4344;Dbxref=EcoGene:EG12532,GeneID:948772;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;gene_synonym=ECK4249,JW5758;locus_tag=b4256 NC_000913.3 RefSeq CDS 4479034 4479537 . - 0 ID=cds4171;Parent=gene4344;Dbxref=ASAP:ABE-0013939,UniProtKB/Swiss-Prot:P39337,Genbank:YP_026287.1,EcoGene:EG12532,GeneID:948772;Name=YP_026287.1;Note=putative acyltransferase;gbkey=CDS;gene=yjgM;product=GNAT family putative N-acetyltransferase;protein_id=YP_026287.1;transl_table=11 NC_000913.3 RefSeq gene 4479730 4480926 . + . ID=gene4345;Dbxref=EcoGene:EG12533,GeneID:948784;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;gene_synonym=ECK4250,JW5759;locus_tag=b4257 NC_000913.3 RefSeq CDS 4479730 4480926 . + 0 ID=cds4172;Parent=gene4345;Dbxref=ASAP:ABE-0013944,UniProtKB/Swiss-Prot:P39338,Genbank:YP_026288.1,EcoGene:EG12533,GeneID:948784;Name=YP_026288.1;gbkey=CDS;gene=yjgN;product=DUF898 family inner membrane protein;protein_id=YP_026288.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4480939 4480956 . + . ID=id567;Note=REP341 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4480982 4483837 . - . ID=gene4346;Dbxref=EcoGene:EG11067,GeneID:948785;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;gene_synonym=ECK4251,JW4215,val-act;locus_tag=b4258 NC_000913.3 RefSeq CDS 4480982 4483837 . - 0 ID=cds4173;Parent=gene4346;Dbxref=ASAP:ABE-0013946,UniProtKB/Swiss-Prot:P07118,Genbank:NP_418679.1,EcoGene:EG11067,GeneID:948785;Name=NP_418679.1;Note=valine tRNA synthetase;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=NP_418679.1;transl_table=11 NC_000913.3 RefSeq gene 4483837 4484280 . - . ID=gene4347;Dbxref=EcoGene:EG11413,GeneID:948787;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;gene_synonym=ECK4252,JW4216;locus_tag=b4259 NC_000913.3 RefSeq CDS 4483837 4484280 . - 0 ID=cds4174;Parent=gene4347;Dbxref=ASAP:ABE-0013948,UniProtKB/Swiss-Prot:P28905,Genbank:NP_418680.1,EcoGene:EG11413,GeneID:948787;Name=NP_418680.1;gbkey=CDS;gene=holC;product=DNA polymerase III%2C chi subunit;protein_id=NP_418680.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4484333 4484416 . + . ID=id568;Note=REP342 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4484440 4485951 . - . ID=gene4348;Dbxref=EcoGene:EG10694,GeneID:948791;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;gene_synonym=carP,ECK4253,JW4217,xerB;locus_tag=b4260 NC_000913.3 RefSeq CDS 4484440 4485951 . - 0 ID=cds4175;Parent=gene4348;Dbxref=ASAP:ABE-0013953,UniProtKB/Swiss-Prot:P68767,Genbank:NP_418681.1,EcoGene:EG10694,GeneID:948791;Name=NP_418681.1;Note=aminopeptidase A/I;gbkey=CDS;gene=pepA;product=multifunctional aminopeptidase A: a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;protein_id=NP_418681.1;transl_table=11 NC_000913.3 RefSeq gene 4486218 4487318 . + . ID=gene4349;Dbxref=EcoGene:EG12535,GeneID:948795;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;gene_synonym=ECK4254,JW4218,yjgP;locus_tag=b4261 NC_000913.3 RefSeq CDS 4486218 4487318 . + 0 ID=cds4176;Parent=gene4349;Dbxref=ASAP:ABE-0013958,UniProtKB/Swiss-Prot:P0AF98,Genbank:NP_418682.1,EcoGene:EG12535,GeneID:948795;Name=NP_418682.1;gbkey=CDS;gene=lptF;product=lipopolysaccharide export ABC permease;protein_id=NP_418682.1;transl_table=11 NC_000913.3 RefSeq gene 4487318 4488400 . + . ID=gene4350;Dbxref=EcoGene:EG12536,GeneID:945324;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;gene_synonym=ECK4255,JW5760,yjgQ;locus_tag=b4262 NC_000913.3 RefSeq CDS 4487318 4488400 . + 0 ID=cds4177;Parent=gene4350;Dbxref=ASAP:ABE-0013960,UniProtKB/Swiss-Prot:P0ADC6,Genbank:NP_418683.4,EcoGene:EG12536,GeneID:945324;Name=NP_418683.4;gbkey=CDS;gene=lptG;product=lipopolysaccharide export ABC permease;protein_id=NP_418683.4;transl_table=11 NC_000913.3 RefSeq repeat_region 4488505 4488540 . + . ID=id569;Note=REP343 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4488561 4490063 . - . ID=gene4351;Dbxref=EcoGene:EG12537,GeneID:948978;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;gene_synonym=ECK4256,JW4220;locus_tag=b4263 NC_000913.3 RefSeq CDS 4488561 4490063 . - 0 ID=cds4178;Parent=gene4351;Dbxref=ASAP:ABE-0013963,UniProtKB/Swiss-Prot:P39342,Genbank:NP_418684.1,EcoGene:EG12537,GeneID:948978;Name=NP_418684.1;gbkey=CDS;gene=yjgR;product=DUF853 family protein with NTPase fold;protein_id=NP_418684.1;transl_table=11 NC_000913.3 RefSeq gene 4490141 4491139 . - . ID=gene4352;Dbxref=EcoGene:EG12538,GeneID:949058;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=ECK4257,gntH,gntS?,JW4221,yjgS;locus_tag=b4264 NC_000913.3 RefSeq CDS 4490141 4491139 . - 0 ID=cds4179;Parent=gene4352;Dbxref=ASAP:ABE-0013966,UniProtKB/Swiss-Prot:P39343,Genbank:NP_418685.1,EcoGene:EG12538,GeneID:949058;Name=NP_418685.1;gbkey=CDS;gene=idnR;product=transcriptional repressor%2C 5-gluconate-binding;protein_id=NP_418685.1;transl_table=11 NC_000913.3 RefSeq gene 4491206 4492525 . - . ID=gene4353;Dbxref=EcoGene:EG12539,GeneID:948798;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;gene_synonym=ECK4258,gntW,JW4222,yjgT;locus_tag=b4265 NC_000913.3 RefSeq CDS 4491206 4492525 . - 0 ID=cds4180;Parent=gene4353;Dbxref=ASAP:ABE-0013969,UniProtKB/Swiss-Prot:P39344,Genbank:NP_418686.1,EcoGene:EG12539,GeneID:948798;Name=NP_418686.1;gbkey=CDS;gene=idnT;product=L-idonate and D-gluconate transporter;protein_id=NP_418686.1;transl_table=11 NC_000913.3 RefSeq gene 4492587 4493351 . - . ID=gene4354;Dbxref=EcoGene:EG12540,GeneID:947109;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;gene_synonym=ECK4259,JW4223,yjgU;locus_tag=b4266 NC_000913.3 RefSeq CDS 4492587 4493351 . - 0 ID=cds4181;Parent=gene4354;Dbxref=ASAP:ABE-0013971,UniProtKB/Swiss-Prot:P0A9P9,Genbank:NP_418687.1,EcoGene:EG12540,GeneID:947109;Name=NP_418687.1;gbkey=CDS;gene=idnO;product=5-keto-D-gluconate-5-reductase;protein_id=NP_418687.1;transl_table=11 NC_000913.3 RefSeq gene 4493375 4494406 . - . ID=gene4355;Dbxref=EcoGene:EG12541,GeneID:944769;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;gene_synonym=ECK4260,JW4224,yjgV;locus_tag=b4267 NC_000913.3 RefSeq CDS 4493375 4494406 . - 0 ID=cds4182;Parent=gene4355;Dbxref=ASAP:ABE-0013975,UniProtKB/Swiss-Prot:P39346,Genbank:NP_418688.1,EcoGene:EG12541,GeneID:944769;Name=NP_418688.1;gbkey=CDS;gene=idnD;product=L-idonate 5-dehydrogenase%2C NAD-binding;protein_id=NP_418688.1;transl_table=11 NC_000913.3 RefSeq gene 4494623 4495186 . + . ID=gene4356;Dbxref=EcoGene:EG12152,GeneID:946066;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;gene_synonym=ECK4261,gntV,JW4225;locus_tag=b4268 NC_000913.3 RefSeq CDS 4494623 4495186 . + 0 ID=cds4183;Parent=gene4356;Dbxref=ASAP:ABE-0013980,UniProtKB/Swiss-Prot:P39208,Genbank:NP_418689.1,EcoGene:EG12152,GeneID:946066;Name=NP_418689.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase%2C thermosensitive;protein_id=NP_418689.1;transl_table=11 NC_000913.3 RefSeq gene 4495190 4496209 . - . ID=gene4357;Dbxref=EcoGene:EG11436,GeneID:948802;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;gene_synonym=ECK4262,JW5761,yjgB;locus_tag=b4269 NC_000913.3 RefSeq CDS 4495190 4496209 . - 0 ID=cds4184;Parent=gene4357;Dbxref=ASAP:ABE-0013982,UniProtKB/Swiss-Prot:P27250,Genbank:NP_418690.4,EcoGene:EG11436,GeneID:948802;Name=NP_418690.4;Note=putative oxidoreductase;gbkey=CDS;gene=ahr;product=broad specificity NADPH-dependent aldehyde reductase%2C Zn-containing;protein_id=NP_418690.4;transl_table=11 NC_000913.3 RefSeq gene 4496405 4496489 . + . ID=gene4358;Dbxref=EcoGene:EG30053,GeneID:948803;Name=leuX;gbkey=Gene;gene=leuX;gene_biotype=tRNA;gene_synonym=ECK4263,JWR0115,Su-6,supP;locus_tag=b4270 NC_000913.3 RefSeq tRNA 4496405 4496489 . + . ID=rna172;Parent=gene4358;Dbxref=ASAP:ABE-0013986,EcoGene:EG30053,GeneID:948803;Note=anticodon: UAA;gbkey=tRNA;gene=leuX;product=tRNA-Leu NC_000913.3 RefSeq exon 4496405 4496489 . + . ID=id570;Parent=rna172;Dbxref=ASAP:ABE-0013986,EcoGene:EG30053,GeneID:948803;Note=anticodon: UAA;gbkey=tRNA;gene=leuX;product=tRNA-Leu NC_000913.3 RefSeq gene 4496675 4497940 . + . ID=gene4359;Dbxref=EcoGene:EG12364,GeneID:948782;Name=intB;gbkey=Gene;gene=intB;gene_biotype=pseudogene;gene_synonym=ECK4264,int,JW4227,yjgC;locus_tag=b4271;pseudo=true NC_000913.3 RefSeq CDS 4496675 4497940 . + 0 ID=cds4185;Parent=gene4359;Dbxref=ASAP:ABE-0013992,UniProtKB/Swiss-Prot:P39347,EcoGene:EG12364,GeneID:948782;Note=pseudogene%2C integrase homology%3BIS%2C phage%2C Tn%3B Phage-related functions and prophages~KpLE2 phage-like element%3B P4-like integrase;gbkey=CDS;gene=intB;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 4498181 4499511 . + . ID=id571;gbkey=mobile_element NC_000913.3 RefSeq gene 4498272 4498637 . + . ID=gene4360;Dbxref=EcoGene:EG40003,GeneID:948781;Name=insC1;gbkey=Gene;gene=insC1;gene_biotype=protein_coding;gene_synonym=ECK0357;locus_tag=b4272 NC_000913.3 RefSeq CDS 4498272 4498637 . + 0 ID=cds4186;Parent=gene4360;Dbxref=ASAP:ABE-0013999,UniProtKB/Swiss-Prot:P0CF45,Genbank:NP_418692.2,EcoGene:EG40003,GeneID:948781;Name=NP_418692.2;gbkey=CDS;gene=insC1;product=IS2 repressor TnpA;protein_id=NP_418692.2;transl_table=11 NC_000913.3 RefSeq gene 4498595 4499500 . + . ID=gene4361;Dbxref=EcoGene:EG40004,GeneID:948779;Name=insD1;gbkey=Gene;gene=insD1;gene_biotype=protein_coding;gene_synonym=ECK0358;locus_tag=b4273 NC_000913.3 RefSeq CDS 4498595 4499500 . + 0 ID=cds4187;Parent=gene4361;Dbxref=ASAP:ABE-0014001,UniProtKB/Swiss-Prot:P0CF58,Genbank:NP_418693.1,EcoGene:EG40004,GeneID:948779;Name=NP_418693.1;gbkey=CDS;gene=insD1;product=IS2 transposase TnpB;protein_id=NP_418693.1;transl_table=11 NC_000913.3 RefSeq gene 4499593 4500791 . - . ID=gene4362;Dbxref=EcoGene:EG12543,GeneID:4056033;Name=yjgX;gbkey=Gene;gene=yjgX;gene_biotype=pseudogene;gene_synonym=ECK4266,JW4234,JW5763,JW5764,yjgW,yjgY;locus_tag=b4575;old_locus_tag=b4274;pseudo=true NC_000913.3 RefSeq CDS 4500534 4500791 . - 0 ID=cds4188;Parent=gene4362;Dbxref=ASAP:ABE-0014007,ASAP:ABE-0014009,ASAP:ABE-0285081,ASAP:ABE-0285108,UniProtKB/Swiss-Prot:P39349,EcoGene:EG12543,GeneID:4056033;Note=pseudogene fragment;gbkey=CDS;gene=yjgX;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4499593 4500534 . - 0 ID=cds4188;Parent=gene4362;Dbxref=ASAP:ABE-0014007,ASAP:ABE-0014009,ASAP:ABE-0285081,ASAP:ABE-0285108,UniProtKB/Swiss-Prot:P39349,EcoGene:EG12543,GeneID:4056033;Note=pseudogene fragment;gbkey=CDS;gene=yjgX;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4501260 4501589 . + . ID=gene4363;Dbxref=EcoGene:EG12603,GeneID:948804;Name=yjgZ;gbkey=Gene;gene=yjgZ;gene_biotype=protein_coding;gene_synonym=ECK4267,JW4236;locus_tag=b4277 NC_000913.3 RefSeq CDS 4501260 4501589 . + 0 ID=cds4189;Parent=gene4363;Dbxref=ASAP:ABE-0014018,UniProtKB/Swiss-Prot:P39351,Genbank:NP_418697.1,EcoGene:EG12603,GeneID:948804;Name=NP_418697.1;gbkey=CDS;gene=yjgZ;product=uncharacterized protein;protein_id=NP_418697.1;transl_table=11 NC_000913.3 RefSeq region 4502090 4503515 . - . ID=id572;gbkey=mobile_element NC_000913.3 RefSeq gene 4502103 4503431 . - . ID=gene4364;Dbxref=EcoGene:EG40007,GeneID:948805;Name=insG;gbkey=Gene;gene=insG;gene_biotype=protein_coding;gene_synonym=ECK4268;locus_tag=b4278 NC_000913.3 RefSeq CDS 4502103 4503431 . - 0 ID=cds4190;Parent=gene4364;Dbxref=ASAP:ABE-0014021,UniProtKB/Swiss-Prot:P03835,Genbank:NP_418698.1,EcoGene:EG40007,GeneID:948805;Name=NP_418698.1;gbkey=CDS;gene=insG;product=IS4 transposase;protein_id=NP_418698.1;transl_table=11 NC_000913.3 RefSeq gene 4504058 4505275 . + . ID=gene4365;Dbxref=EcoGene:EG12544,GeneID:948807;Name=yjhB;gbkey=Gene;gene=yjhB;gene_biotype=protein_coding;gene_synonym=ECK4269,JW5768;locus_tag=b4279 NC_000913.3 RefSeq CDS 4504058 4505275 . + 0 ID=cds4191;Parent=gene4365;Dbxref=ASAP:ABE-0014025,UniProtKB/Swiss-Prot:P39352,Genbank:NP_418699.4,EcoGene:EG12544,GeneID:948807;Name=NP_418699.4;Note=putative transport protein;gbkey=CDS;gene=yjhB;product=putative MFS transporter%2C membrane protein;protein_id=NP_418699.4;transl_table=11 NC_000913.3 RefSeq gene 4505287 4506405 . + . ID=gene4366;Dbxref=EcoGene:EG12545,GeneID:948808;Name=yjhC;gbkey=Gene;gene=yjhC;gene_biotype=protein_coding;gene_synonym=ECK4270,JW5769;locus_tag=b4280 NC_000913.3 RefSeq CDS 4505287 4506405 . + 0 ID=cds4192;Parent=gene4366;Dbxref=ASAP:ABE-0014027,UniProtKB/Swiss-Prot:P39353,Genbank:NP_418700.2,EcoGene:EG12545,GeneID:948808;Name=NP_418700.2;Note=putative dehydrogenase;gbkey=CDS;gene=yjhC;product=GFO/IDH/MOCA family putative oxidoreductase. NAD(P)-dependent;protein_id=NP_418700.2;transl_table=11 NC_000913.3 RefSeq gene 4506448 4506573 . + . ID=gene4367;Dbxref=EcoGene:EG14464,GeneID:5625581;Name=ythA;gbkey=Gene;gene=ythA;gene_biotype=protein_coding;gene_synonym=ECK4434;locus_tag=b4655 NC_000913.3 RefSeq CDS 4506448 4506573 . + 0 ID=cds4193;Parent=gene4367;Dbxref=UniProtKB/Swiss-Prot:A8DYQ1,Genbank:YP_001491548.1,EcoGene:EG14464,GeneID:5625581;Name=YP_001491548.1;gbkey=CDS;gene=ythA;product=uncharacterized protein;protein_id=YP_001491548.1;transl_table=11 NC_000913.3 RefSeq gene 4506626 4506856 . - . ID=gene4368;Dbxref=EcoGene:EG12546,GeneID:948809;Name=yjhD;gbkey=Gene;gene=yjhD;gene_biotype=pseudogene;gene_synonym=ECK4271,JW5770;locus_tag=b4281;pseudo=true NC_000913.3 RefSeq CDS 4506626 4506856 . - 0 ID=cds4194;Parent=gene4368;Dbxref=ASAP:ABE-0014029,UniProtKB/Swiss-Prot:P39354,EcoGene:EG12546,GeneID:948809;Note=pseudogene%2C KpLE2 phage-like element;gbkey=CDS;gene=yjhD;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4506861 4507109 . + . ID=gene4369;Dbxref=EcoGene:EG12547,GeneID:948810;Name=yjhE;gbkey=Gene;gene=yjhE;gene_biotype=pseudogene;gene_synonym=ECK4272,JW4242;locus_tag=b4282;pseudo=true NC_000913.3 RefSeq CDS 4506861 4507109 . + 0 ID=cds4195;Parent=gene4369;Dbxref=ASAP:ABE-0014033,UniProtKB/Swiss-Prot:P39355,EcoGene:EG12547,GeneID:948810;Note=pseudogene%2C KpLE2 phage-like element;gbkey=CDS;gene=yjhE;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 4507125 4507458 . + . ID=id573;gbkey=mobile_element NC_000913.3 RefSeq gene 4507197 4507451 . + . ID=gene4370;Dbxref=EcoGene:EG40121,GeneID:5061531;Name=insO;gbkey=Gene;gene=insO;gene_biotype=pseudogene;gene_synonym=ECK4476,insN2,ORFAB,yjhW;locus_tag=b4623;part=1/3;pseudo=true NC_000913.3 RefSeq gene 4509009 4509479 . + . ID=gene4370;Dbxref=EcoGene:EG40121,GeneID:5061531;Name=insO;gbkey=Gene;gene=insO;gene_biotype=pseudogene;gene_synonym=ECK4476,insN2,ORFAB,yjhW;locus_tag=b4623;part=2/3;pseudo=true NC_000913.3 RefSeq gene 4509479 4509793 . + . ID=gene4370;Dbxref=EcoGene:EG40121,GeneID:5061531;Name=insO;gbkey=Gene;gene=insO;gene_biotype=pseudogene;gene_synonym=ECK4476,insN2,ORFAB,yjhW;locus_tag=b4623;part=3/3;pseudo=true NC_000913.3 RefSeq CDS 4507197 4507451 . + 0 ID=cds4196;Parent=gene4370;Dbxref=ASAP:ABE-0014040,EcoGene:EG40121,GeneID:5061531;Note=pseudogene%2C IS911 transposase B%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insO;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4509009 4509479 . + 0 ID=cds4196;Parent=gene4370;Dbxref=ASAP:ABE-0014040,EcoGene:EG40121,GeneID:5061531;Note=pseudogene%2C IS911 transposase B%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insO;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4509479 4509793 . + 0 ID=cds4196;Parent=gene4370;Dbxref=ASAP:ABE-0014040,EcoGene:EG40121,GeneID:5061531;Note=pseudogene%2C IS911 transposase B%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insO;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 4507459 4508679 . - . ID=id574;gbkey=mobile_element NC_000913.3 RefSeq gene 4507466 4508617 . - . ID=gene4371;Dbxref=EcoGene:EG40009,GeneID:948815;Name=insI1;gbkey=Gene;gene=insI1;gene_biotype=protein_coding;gene_synonym=ECK0258;locus_tag=b4284 NC_000913.3 RefSeq CDS 4507466 4508617 . - 0 ID=cds4197;Parent=gene4371;Dbxref=ASAP:ABE-0014045,UniProtKB/Swiss-Prot:P0CF90,Genbank:NP_418704.1,EcoGene:EG40009,GeneID:948815;Name=NP_418704.1;gbkey=CDS;gene=insI1;product=IS30 transposase;protein_id=NP_418704.1;transl_table=11 NC_000913.3 RefSeq gene 4508676 4508942 . - . ID=gene4372;Dbxref=EcoGene:EG40013,GeneID:1450310;Name=insM;gbkey=Gene;gene=insM;gene_biotype=pseudogene;gene_synonym=ECK4273;locus_tag=b4561;pseudo=true NC_000913.3 RefSeq CDS 4508676 4508942 . - 0 ID=cds4198;Parent=gene4372;Dbxref=ASAP:ABE-0285082,EcoGene:EG40013,GeneID:1450310;Note=pseudogene%2C IS600 transposase%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insM;pseudo=true;transl_table=11 NC_000913.3 RefSeq region 4508680 4509006 . - . ID=id575;gbkey=mobile_element;gene=insM NC_000913.3 RefSeq region 4509007 4509801 . + . ID=id576;gbkey=mobile_element;gene=insO NC_000913.3 RefSeq gene 4509804 4510133 . + . ID=gene4373;Dbxref=EcoGene:EG14409,GeneID:948818;Name=yjhV;gbkey=Gene;gene=yjhV;gene_biotype=pseudogene;gene_synonym=ECK4276,JW4246;locus_tag=b4286;pseudo=true NC_000913.3 RefSeq CDS 4509804 4510133 . + 0 ID=cds4199;Parent=gene4373;Dbxref=ASAP:ABE-0014055,UniProtKB/Swiss-Prot:Q47719,EcoGene:EG14409,GeneID:948818;Note=pseudogene%2C KpLE2 phage-like element;gbkey=CDS;gene=yjhV;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4510690 4511457 . - . ID=gene4374;Dbxref=EcoGene:EG10290,GeneID:948819;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;gene_synonym=ECK4277,JW4247;locus_tag=b4287 NC_000913.3 RefSeq CDS 4510690 4511457 . - 0 ID=cds4200;Parent=gene4374;Dbxref=ASAP:ABE-0014057,UniProtKB/Swiss-Prot:P15031,Genbank:NP_418707.1,EcoGene:EG10290,GeneID:948819;Name=NP_418707.1;Note=ATP-binding component of citrate-dependent iron(III) transport protein%3B ATP-binding component of ABC superfamily;gbkey=CDS;gene=fecE;product=ferric citrate ABC transporter ATPase;protein_id=NP_418707.1;transl_table=11 NC_000913.3 RefSeq gene 4511458 4512414 . - . ID=gene4375;Dbxref=EcoGene:EG10289,GeneID:946816;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;gene_synonym=ECK4278,JW4248;locus_tag=b4288 NC_000913.3 RefSeq CDS 4511458 4512414 . - 0 ID=cds4201;Parent=gene4375;Dbxref=ASAP:ABE-0014059,UniProtKB/Swiss-Prot:P15029,Genbank:NP_418708.1,EcoGene:EG10289,GeneID:946816;Name=NP_418708.1;Note=citrate-dependent iron transport%2C membrane-bound protein%3B membrane component of ABC superfamily;gbkey=CDS;gene=fecD;product=ferric citrate ABC transporter permease;protein_id=NP_418708.1;transl_table=11 NC_000913.3 RefSeq gene 4512411 4513409 . - . ID=gene4376;Dbxref=EcoGene:EG10288,GeneID:948826;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;gene_synonym=ECK4279,JW4249;locus_tag=b4289 NC_000913.3 RefSeq CDS 4512411 4513409 . - 0 ID=cds4202;Parent=gene4376;Dbxref=ASAP:ABE-0014063,UniProtKB/Swiss-Prot:P15030,Genbank:NP_418709.1,EcoGene:EG10288,GeneID:948826;Name=NP_418709.1;Note=citrate-dependent iron(III) transport protein%2C cytosolic%3B membrane component of ABC superfamily;gbkey=CDS;gene=fecC;product=ferric citrate ABC transporter permease;protein_id=NP_418709.1;transl_table=11 NC_000913.3 RefSeq gene 4513406 4514308 . - . ID=gene4377;Dbxref=EcoGene:EG10287,GeneID:946838;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;gene_synonym=ECK4280,JW4250;locus_tag=b4290 NC_000913.3 RefSeq CDS 4513406 4514308 . - 0 ID=cds4203;Parent=gene4377;Dbxref=ASAP:ABE-0014065,UniProtKB/Swiss-Prot:P15028,Genbank:NP_418710.4,EcoGene:EG10287,GeneID:946838;Name=NP_418710.4;Note=citrate-dependent iron transport%2C periplasmic protein%3B periplasmic-binding component of ABC superfamily;gbkey=CDS;gene=fecB;product=ferric citrate ABC transporter periplasmic binding protein;protein_id=NP_418710.4;transl_table=11 NC_000913.3 RefSeq gene 4514353 4516677 . - . ID=gene4378;Dbxref=EcoGene:EG10286,GeneID:946427;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;gene_synonym=ECK4281,JW4251;locus_tag=b4291 NC_000913.3 RefSeq CDS 4514353 4516677 . - 0 ID=cds4204;Parent=gene4378;Dbxref=ASAP:ABE-0014067,UniProtKB/Swiss-Prot:P13036,Genbank:NP_418711.1,EcoGene:EG10286,GeneID:946427;Name=NP_418711.1;Note=outer membrane receptor%3B citrate-dependent iron transport%2C outer membrane receptor;gbkey=CDS;gene=fecA;product=TonB-dependent outer membrane ferric citrate transporter and signal transducer%3B ferric citrate extracelluar receptor%3B FecR-interacting protein;protein_id=NP_418711.1;transl_table=11 NC_000913.3 RefSeq gene 4516764 4517717 . - . ID=gene4379;Dbxref=EcoGene:EG10292,GeneID:949104;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;gene_synonym=ECK4282,JW4252;locus_tag=b4292 NC_000913.3 RefSeq CDS 4516764 4517717 . - 0 ID=cds4205;Parent=gene4379;Dbxref=ASAP:ABE-0014070,UniProtKB/Swiss-Prot:P23485,Genbank:NP_418712.1,EcoGene:EG10292,GeneID:949104;Name=NP_418712.1;Note=regulator for fec operon%2C periplasmic;gbkey=CDS;gene=fecR;product=anti-sigma transmembrane signal transducer for ferric citrate transport%3B periplasmic FecA-bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator;protein_id=NP_418712.1;transl_table=11 NC_000913.3 RefSeq gene 4517714 4518235 . - . ID=gene4380;Dbxref=EcoGene:EG10291,GeneID:946839;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;gene_synonym=ECK4283,JW4253;locus_tag=b4293 NC_000913.3 RefSeq CDS 4517714 4518235 . - 0 ID=cds4206;Parent=gene4380;Dbxref=ASAP:ABE-0014072,UniProtKB/Swiss-Prot:P23484,Genbank:NP_418713.1,EcoGene:EG10291,GeneID:946839;Name=NP_418713.1;Note=probable RNA polymerase sigma factor;gbkey=CDS;gene=fecI;product=RNA polymerase sigma-19 factor%2C fec operon-specific%3B ECF sigma factor;protein_id=NP_418713.1;transl_table=11 NC_000913.3 RefSeq region 4518472 4519239 . + . ID=id577;gbkey=mobile_element NC_000913.3 RefSeq gene 4518527 4518802 . + . ID=gene4381;Dbxref=EcoGene:EG40001,GeneID:948830;Name=insA;Note=insA6;gbkey=Gene;gene=insA;gene_biotype=protein_coding;gene_synonym=ECK4562;locus_tag=b4294 NC_000913.3 RefSeq CDS 4518527 4518802 . + 0 ID=cds4207;Parent=gene4381;Dbxref=ASAP:ABE-0014077,UniProtKB/Swiss-Prot:P0CF12,Genbank:NP_418714.1,EcoGene:EG40001,GeneID:948830;Name=NP_418714.1;gbkey=CDS;gene=insA;product=IS1 repressor TnpA;protein_id=NP_418714.1;transl_table=11 NC_000913.3 RefSeq gene 4518721 4519224 . + . ID=gene4382;Dbxref=EcoGene:EG40002,GeneID:4056034;Name=insB1;gbkey=Gene;gene=insB1;gene_biotype=pseudogene;gene_synonym=ECK0022;locus_tag=b4576;pseudo=true NC_000913.3 RefSeq CDS 4518721 4519224 . + 0 ID=cds4208;Parent=gene4382;Dbxref=ASAP:ABE-0285109,UniProtKB/Swiss-Prot:P0CF29,EcoGene:EG40002,GeneID:4056034;Note=IS1 transposase B%3BIS%2C phage%2C Tn%3B Transposon-related functions%3B extrachromosomal%3B transposon related;gbkey=CDS;gene=insB1;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4519338 4520324 . - . ID=gene4383;Dbxref=EcoGene:EG12604,GeneID:948827;Name=yjhU;gbkey=Gene;gene=yjhU;gene_biotype=protein_coding;gene_synonym=ECK4284,JW5952;locus_tag=b4295 NC_000913.3 RefSeq CDS 4519338 4520324 . - 0 ID=cds4209;Parent=gene4383;Dbxref=ASAP:ABE-0014079,UniProtKB/Swiss-Prot:P39356,Genbank:NP_418715.2,EcoGene:EG12604,GeneID:948827;Name=NP_418715.2;gbkey=CDS;gene=yjhU;product=putative DNA-binding transcriptional regulator%3B KpLE2 phage-like element;protein_id=NP_418715.2;transl_table=11 NC_000913.3 RefSeq gene 4520671 4522020 . - . ID=gene4384;Dbxref=EcoGene:EG12548,GeneID:949102;Name=yjhF;gbkey=Gene;gene=yjhF;gene_biotype=protein_coding;gene_synonym=ECK4285,JW4258;locus_tag=b4296 NC_000913.3 RefSeq CDS 4520671 4522020 . - 0 ID=cds4210;Parent=gene4384;Dbxref=ASAP:ABE-0014084,UniProtKB/Swiss-Prot:P39357,Genbank:NP_418716.1,EcoGene:EG12548,GeneID:949102;Name=NP_418716.1;Note=putative transport system permease;gbkey=CDS;gene=yjhF;product=putative transporter;protein_id=NP_418716.1;transl_table=11 NC_000913.3 RefSeq gene 4522127 4524094 . - . ID=gene4385;Dbxref=EcoGene:EG12549,GeneID:946829;Name=yjhG;gbkey=Gene;gene=yjhG;gene_biotype=protein_coding;gene_synonym=ECK4286,JW4259;locus_tag=b4297 NC_000913.3 RefSeq CDS 4522127 4524094 . - 0 ID=cds4211;Parent=gene4385;Dbxref=ASAP:ABE-0014087,UniProtKB/Swiss-Prot:P39358,Genbank:NP_418717.1,EcoGene:EG12549,GeneID:946829;Name=NP_418717.1;Note=putative dehydratase;gbkey=CDS;gene=yjhG;product=putative dehydratase;protein_id=NP_418717.1;transl_table=11 NC_000913.3 RefSeq gene 4524105 4525010 . - . ID=gene4386;Dbxref=EcoGene:EG12550,GeneID:948825;Name=yjhH;gbkey=Gene;gene=yjhH;gene_biotype=protein_coding;gene_synonym=ECK4287,JW5775;locus_tag=b4298 NC_000913.3 RefSeq CDS 4524105 4525010 . - 0 ID=cds4212;Parent=gene4386;Dbxref=ASAP:ABE-0014089,UniProtKB/Swiss-Prot:P39359,Genbank:NP_418718.4,EcoGene:EG12550,GeneID:948825;Name=NP_418718.4;Note=putative lyase/synthase;gbkey=CDS;gene=yjhH;product=putative lyase/synthase;protein_id=NP_418718.4;transl_table=11 NC_000913.3 RefSeq gene 4525015 4525803 . - . ID=gene4387;Dbxref=EcoGene:EG12551,GeneID:949100;Name=yjhI;gbkey=Gene;gene=yjhI;gene_biotype=protein_coding;gene_synonym=ECK4288,JW4261;locus_tag=b4299 NC_000913.3 RefSeq CDS 4525015 4525803 . - 0 ID=cds4213;Parent=gene4387;Dbxref=ASAP:ABE-0014092,UniProtKB/Swiss-Prot:P39360,Genbank:NP_418719.1,EcoGene:EG12551,GeneID:949100;Name=NP_418719.1;Note=putative regulator;gbkey=CDS;gene=yjhI;product=putative DNA-binding transcriptional regulator;protein_id=NP_418719.1;transl_table=11 NC_000913.3 RefSeq gene 4526106 4526888 . - . ID=gene4388;Dbxref=EcoGene:EG12552,GeneID:946830;Name=sgcR;gbkey=Gene;gene=sgcR;gene_biotype=protein_coding;gene_synonym=ECK4289,JW4262,yjhJ;locus_tag=b4300 NC_000913.3 RefSeq CDS 4526106 4526888 . - 0 ID=cds4214;Parent=gene4388;Dbxref=ASAP:ABE-0014094,UniProtKB/Swiss-Prot:P39361,Genbank:NP_418720.1,EcoGene:EG12552,GeneID:946830;Name=NP_418720.1;Note=putative DEOR-type transcriptional regulator;gbkey=CDS;gene=sgcR;product=putative DNA-binding transcriptional regulator;protein_id=NP_418720.1;transl_table=11 NC_000913.3 RefSeq gene 4526905 4527537 . - . ID=gene4389;Dbxref=EcoGene:EG12553,GeneID:948829;Name=sgcE;gbkey=Gene;gene=sgcE;gene_biotype=protein_coding;gene_synonym=ECK4290,JW4263,yjhK;locus_tag=b4301 NC_000913.3 RefSeq CDS 4526905 4527537 . - 0 ID=cds4215;Parent=gene4389;Dbxref=ASAP:ABE-0014097,UniProtKB/Swiss-Prot:P39362,Genbank:NP_418721.1,EcoGene:EG12553,GeneID:948829;Name=NP_418721.1;Note=putative epimerase;gbkey=CDS;gene=sgcE;product=putative epimerase;protein_id=NP_418721.1;transl_table=11 NC_000913.3 RefSeq gene 4527549 4527980 . - . ID=gene4390;Dbxref=EcoGene:EG12554,GeneID:948831;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;gene_synonym=ECK4291,JW4264,yjhL;locus_tag=b4302 NC_000913.3 RefSeq CDS 4527549 4527980 . - 0 ID=cds4216;Parent=gene4390;Dbxref=ASAP:ABE-0014100,UniProtKB/Swiss-Prot:P39363,Genbank:NP_418722.1,EcoGene:EG12554,GeneID:948831;Name=NP_418722.1;Note=putative PTS system enzyme II A component;gbkey=CDS;gene=sgcA;product=putative phosphotransferase enzyme IIA component;protein_id=NP_418722.1;transl_table=11 NC_000913.3 RefSeq gene 4527977 4528066 . + . ID=gene4391;Dbxref=EcoGene:EG31181,GeneID:5061532;Name=ryjB;gbkey=Gene;gene=ryjB;gene_biotype=ncRNA;gene_synonym=ECK4431;locus_tag=b4624 NC_000913.3 RefSeq ncRNA 4527977 4528066 . + . ID=rna173;Parent=gene4391;Dbxref=EcoGene:EG31181,GeneID:5061532;gbkey=ncRNA;gene=ryjB;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq exon 4527977 4528066 . + . ID=id578;Parent=rna173;Dbxref=EcoGene:EG31181,GeneID:5061532;gbkey=ncRNA;gene=ryjB;ncrna_class=other;product=novel sRNA%2C function unknown NC_000913.3 RefSeq gene 4528111 4528917 . - . ID=gene4392;Dbxref=EcoGene:EG12555,GeneID:948834;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;gene_synonym=ECK4292,JW4265,yjhM;locus_tag=b4303 NC_000913.3 RefSeq CDS 4528111 4528917 . - 0 ID=cds4217;Parent=gene4392;Dbxref=ASAP:ABE-0014102,UniProtKB/Swiss-Prot:P39364,Genbank:NP_418723.1,EcoGene:EG12555,GeneID:948834;Name=NP_418723.1;Note=putative nucleoside triphosphatase;gbkey=CDS;gene=sgcQ;product=putative nucleoside triphosphatase;protein_id=NP_418723.1;transl_table=11 NC_000913.3 RefSeq gene 4528930 4530243 . - . ID=gene4393;Dbxref=EcoGene:EG12556,GeneID:946849;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;gene_synonym=ECK4293,JW4266,yjhN;locus_tag=b4304 NC_000913.3 RefSeq CDS 4528930 4530243 . - 0 ID=cds4218;Parent=gene4393;Dbxref=ASAP:ABE-0014105,UniProtKB/Swiss-Prot:P39365,Genbank:NP_418724.1,EcoGene:EG12556,GeneID:946849;Name=NP_418724.1;Note=putative PTS system enzyme IIC component;gbkey=CDS;gene=sgcC;product=putative PTS system EIIC permease component;protein_id=NP_418724.1;transl_table=11 NC_000913.3 RefSeq gene 4530255 4530533 . - . ID=gene4394;Dbxref=EcoGene:EG14343,GeneID:1450295;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;gene_synonym=ECK4294,JW5967;locus_tag=b4565 NC_000913.3 RefSeq CDS 4530255 4530533 . - 0 ID=cds4219;Parent=gene4394;Dbxref=ASAP:ABE-0285086,UniProtKB/Swiss-Prot:P58035,Genbank:YP_588476.1,EcoGene:EG14343,GeneID:1450295;Name=YP_588476.1;gbkey=CDS;gene=sgcB;product=putative enzyme IIB component of PTS;protein_id=YP_588476.1;transl_table=11 NC_000913.3 RefSeq gene 4530530 4531651 . - . ID=gene4395;Dbxref=EcoGene:EG12557,GeneID:948840;Name=sgcX;gbkey=Gene;gene=sgcX;gene_biotype=protein_coding;gene_synonym=ECK4295,JW5776,yjhO;locus_tag=b4305 NC_000913.3 RefSeq CDS 4530530 4531651 . - 0 ID=cds4220;Parent=gene4395;Dbxref=ASAP:ABE-0014112,UniProtKB/Swiss-Prot:P39366,Genbank:NP_418725.4,EcoGene:EG12557,GeneID:948840;Name=NP_418725.4;Note=putative lyase/synthase;gbkey=CDS;gene=sgcX;product=putative endoglucanase with Zn-dependent exopeptidase domain;protein_id=NP_418725.4;transl_table=11 NC_000913.3 RefSeq gene 4532050 4532310 . - . ID=gene4396;Dbxref=EcoGene:EG14442,GeneID:5625582;Name=yjhY;gbkey=Gene;gene=yjhY;gene_biotype=pseudogene;gene_synonym=ECK4453;locus_tag=b4656;pseudo=true NC_000913.3 RefSeq CDS 4532050 4532310 . - 0 ID=cds4221;Parent=gene4396;Dbxref=EcoGene:EG14442,GeneID:5625582;Note=pseudogene%2C zinc finger protein family;gbkey=CDS;gene=yjhY;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4532437 4533183 . - . ID=gene4397;Dbxref=EcoGene:EG12558,GeneID:946851;Name=yjhP;gbkey=Gene;gene=yjhP;gene_biotype=protein_coding;gene_synonym=ECK4296,JW4268;locus_tag=b4306 NC_000913.3 RefSeq CDS 4532437 4533183 . - 0 ID=cds4222;Parent=gene4397;Dbxref=ASAP:ABE-0014115,UniProtKB/Swiss-Prot:P39367,Genbank:NP_418726.1,EcoGene:EG12558,GeneID:946851;Name=NP_418726.1;Note=putative methyltransferase;gbkey=CDS;gene=yjhP;product=putative methyltransferase;protein_id=NP_418726.1;transl_table=11 NC_000913.3 RefSeq gene 4533239 4533784 . - . ID=gene4398;Dbxref=EcoGene:EG12559,GeneID:949059;Name=yjhQ;gbkey=Gene;gene=yjhQ;gene_biotype=protein_coding;gene_synonym=ECK4297,JW4269;locus_tag=b4307 NC_000913.3 RefSeq CDS 4533239 4533784 . - 0 ID=cds4223;Parent=gene4398;Dbxref=ASAP:ABE-0014119,UniProtKB/Swiss-Prot:P39368,Genbank:NP_418727.1,EcoGene:EG12559,GeneID:949059;Name=NP_418727.1;gbkey=CDS;gene=yjhQ;product=GNAT family putative N-acetyltransferase;protein_id=NP_418727.1;transl_table=11 NC_000913.3 RefSeq gene 4533796 4534053 . - . ID=gene4399;Dbxref=EcoGene:EG14430,GeneID:1450297;Name=yjhX;gbkey=Gene;gene=yjhX;gene_biotype=protein_coding;gene_synonym=ECK4298,JW5968;locus_tag=b4566 NC_000913.3 RefSeq CDS 4533796 4534053 . - 0 ID=cds4224;Parent=gene4399;Dbxref=ASAP:ABE-0285087,UniProtKB/Swiss-Prot:Q2EEU2,Genbank:YP_588477.1,EcoGene:EG14430,GeneID:1450297;Name=YP_588477.1;gbkey=CDS;gene=yjhX;product=UPF0386 family protein;protein_id=YP_588477.1;transl_table=11 NC_000913.3 RefSeq gene 4534430 4534675 . - . ID=gene4400;Dbxref=EcoGene:EG14447,GeneID:5625583;Name=yjhZ;gbkey=Gene;gene=yjhZ;gene_biotype=pseudogene;gene_synonym=ECK4455;locus_tag=b4657;pseudo=true NC_000913.3 RefSeq CDS 4534430 4534675 . - 0 ID=cds4225;Parent=gene4400;Dbxref=EcoGene:EG14447,GeneID:5625583;Note=pseudogene%2C rimK paralog%2C C-terminal fragment;gbkey=CDS;gene=yjhZ;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4534791 4536031 . + . ID=gene4401;Dbxref=EcoGene:EG12560,GeneID:944740;Name=yjhR;gbkey=Gene;gene=yjhR;gene_biotype=pseudogene;gene_synonym=ECK4299,JW4271;locus_tag=b4308;pseudo=true NC_000913.3 RefSeq CDS 4534791 4535003 . + 0 ID=cds4226;Parent=gene4401;Dbxref=ASAP:ABE-0014128,UniProtKB/Swiss-Prot:P39369,EcoGene:EG12560,GeneID:944740;Note=pseudogene%2C helicase family~putative frameshift suppressor;gbkey=CDS;gene=yjhR;pseudo=true;transl_table=11 NC_000913.3 RefSeq CDS 4535003 4536031 . + 0 ID=cds4226;Parent=gene4401;Dbxref=ASAP:ABE-0014128,UniProtKB/Swiss-Prot:P39369,EcoGene:EG12560,GeneID:944740;Note=pseudogene%2C helicase family~putative frameshift suppressor;gbkey=CDS;gene=yjhR;pseudo=true;transl_table=11 NC_000913.3 RefSeq repeat_region 4536405 4536430 . + . ID=id579;Note=REP344 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4536614 4537594 . - . ID=gene4402;Dbxref=EcoGene:EG12561,GeneID:948835;Name=nanS;gbkey=Gene;gene=nanS;gene_biotype=protein_coding;gene_synonym=ECK4300,JW4272,yjhS;locus_tag=b4309 NC_000913.3 RefSeq CDS 4536614 4537594 . - 0 ID=cds4227;Parent=gene4402;Dbxref=ASAP:ABE-0014130,UniProtKB/Swiss-Prot:P39370,Genbank:NP_418729.1,EcoGene:EG12561,GeneID:948835;Name=NP_418729.1;gbkey=CDS;gene=nanS;product=9-O-acetyl N-acetylneuraminic acid esterase;protein_id=NP_418729.1;transl_table=11 NC_000913.3 RefSeq gene 4537659 4538765 . - . ID=gene4403;Dbxref=EcoGene:EG12562,GeneID:949106;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;gene_synonym=ECK4301,JW5777,yjhT;locus_tag=b4310 NC_000913.3 RefSeq CDS 4537659 4538765 . - 0 ID=cds4228;Parent=gene4403;Dbxref=ASAP:ABE-0014132,UniProtKB/Swiss-Prot:P39371,Genbank:NP_418730.4,EcoGene:EG12562,GeneID:949106;Name=NP_418730.4;gbkey=CDS;gene=nanM;product=N-acetylneuraminic acid mutarotase;protein_id=NP_418730.4;transl_table=11 NC_000913.3 RefSeq gene 4538785 4539501 . - . ID=gene4404;Dbxref=EcoGene:EG12389,GeneID:946843;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;gene_synonym=ECK4302,JW5778,yjhA;locus_tag=b4311 NC_000913.3 RefSeq CDS 4538785 4539501 . - 0 ID=cds4229;Parent=gene4404;Dbxref=ASAP:ABE-0014136,UniProtKB/Swiss-Prot:P69856,Genbank:NP_418731.2,EcoGene:EG12389,GeneID:946843;Name=NP_418731.2;gbkey=CDS;gene=nanC;product=N-acetylnuraminic acid outer membrane channel protein;protein_id=NP_418731.2;transl_table=11 NC_000913.3 RefSeq gene 4540957 4541559 . + . ID=gene4405;Dbxref=EcoGene:EG10309,GeneID:948832;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;gene_synonym=ECK4303,JW4275;locus_tag=b4312 NC_000913.3 RefSeq CDS 4540957 4541559 . + 0 ID=cds4230;Parent=gene4405;Dbxref=ASAP:ABE-0014141,UniProtKB/Swiss-Prot:P0ADH5,Genbank:NP_418732.1,EcoGene:EG10309,GeneID:948832;Name=NP_418732.1;Note=recombinase involved in phase variation%3B regulator for fimA;gbkey=CDS;gene=fimB;product=tyrosine recombinase/inversion of on/off regulator of fimA;protein_id=NP_418732.1;transl_table=11 NC_000913.3 RefSeq gene 4542037 4542633 . + . ID=gene4406;Dbxref=EcoGene:EG10312,GeneID:948836;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;gene_synonym=ECK4304,hyp,JW4276;locus_tag=b4313 NC_000913.3 RefSeq CDS 4542037 4542633 . + 0 ID=cds4231;Parent=gene4406;Dbxref=ASAP:ABE-0014143,UniProtKB/Swiss-Prot:P0ADH7,Genbank:NP_418733.1,EcoGene:EG10312,GeneID:948836;Name=NP_418733.1;Note=recombinase involved in phase variation%3B regulator for fimA;gbkey=CDS;gene=fimE;product=tyrosine recombinase/inversion of on/off regulator of fimA;protein_id=NP_418733.1;transl_table=11 NC_000913.3 RefSeq gene 4543115 4543663 . + . ID=gene4407;Dbxref=EcoGene:EG10308,GeneID:948838;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;gene_synonym=ECK4305,fimD,JW4277,pilA;locus_tag=b4314 NC_000913.3 RefSeq CDS 4543115 4543663 . + 0 ID=cds4232;Parent=gene4407;Dbxref=ASAP:ABE-0014145,UniProtKB/Swiss-Prot:P04128,Genbank:NP_418734.1,EcoGene:EG10308,GeneID:948838;Name=NP_418734.1;gbkey=CDS;gene=fimA;product=major type 1 subunit fimbrin (pilin);protein_id=NP_418734.1;transl_table=11 NC_000913.3 RefSeq gene 4543728 4544267 . + . ID=gene4408;Dbxref=EcoGene:EG11974,GeneID:948841;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;gene_synonym=ECK4306,JW5779;locus_tag=b4315 NC_000913.3 RefSeq CDS 4543728 4544267 . + 0 ID=cds4233;Parent=gene4408;Dbxref=ASAP:ABE-0014147,UniProtKB/Swiss-Prot:P39264,Genbank:NP_418735.2,EcoGene:EG11974,GeneID:948841;Name=NP_418735.2;Note=fimbrial protein;gbkey=CDS;gene=fimI;product=fimbrial protein involved in type 1 pilus biosynthesis;protein_id=NP_418735.2;transl_table=11 NC_000913.3 RefSeq gene 4544304 4545029 . + . ID=gene4409;Dbxref=EcoGene:EG10310,GeneID:948843;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;gene_synonym=ECK4307,JW4279;locus_tag=b4316 NC_000913.3 RefSeq CDS 4544304 4545029 . + 0 ID=cds4234;Parent=gene4409;Dbxref=ASAP:ABE-0014149,UniProtKB/Swiss-Prot:P31697,Genbank:NP_418736.3,EcoGene:EG10310,GeneID:948843;Name=NP_418736.3;Note=periplasmic chaperone%2C required for type 1 fimbriae;gbkey=CDS;gene=fimC;product=periplasmic chaperone;protein_id=NP_418736.3;transl_table=11 NC_000913.3 RefSeq gene 4545096 4547732 . + . ID=gene4410;Dbxref=EcoGene:EG10311,GeneID:948844;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;gene_synonym=ECK4308,JW5780;locus_tag=b4317 NC_000913.3 RefSeq CDS 4545096 4547732 . + 0 ID=cds4235;Parent=gene4410;Dbxref=ASAP:ABE-0014151,UniProtKB/Swiss-Prot:P30130,Genbank:NP_418737.1,EcoGene:EG10311,GeneID:948844;Name=NP_418737.1;Note=outer membrane protein%3B export and assembly of type 1 fimbriae%2C interrupted;gbkey=CDS;gene=fimD;product=fimbrial usher outer membrane porin protein%3B FimCD chaperone-usher;protein_id=NP_418737.1;transl_table=11 NC_000913.3 RefSeq gene 4547742 4548272 . + . ID=gene4411;Dbxref=EcoGene:EG10313,GeneID:948845;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;gene_synonym=ECK4309,JW4281;locus_tag=b4318 NC_000913.3 RefSeq CDS 4547742 4548272 . + 0 ID=cds4236;Parent=gene4411;Dbxref=ASAP:ABE-0014153,UniProtKB/Swiss-Prot:P08189,Genbank:NP_418738.1,EcoGene:EG10313,GeneID:948845;Name=NP_418738.1;Note=fimbrial morphology;gbkey=CDS;gene=fimF;product=minor component of type 1 fimbriae;protein_id=NP_418738.1;transl_table=11 NC_000913.3 RefSeq gene 4548285 4548788 . + . ID=gene4412;Dbxref=EcoGene:EG10314,GeneID:948846;Name=fimG;gbkey=Gene;gene=fimG;gene_biotype=protein_coding;gene_synonym=ECK4310,JW4282;locus_tag=b4319 NC_000913.3 RefSeq CDS 4548285 4548788 . + 0 ID=cds4237;Parent=gene4412;Dbxref=ASAP:ABE-0014155,UniProtKB/Swiss-Prot:P08190,Genbank:NP_418739.1,EcoGene:EG10314,GeneID:948846;Name=NP_418739.1;Note=fimbrial morphology;gbkey=CDS;gene=fimG;product=minor component of type 1 fimbriae;protein_id=NP_418739.1;transl_table=11 NC_000913.3 RefSeq gene 4548808 4549710 . + . ID=gene4413;Dbxref=EcoGene:EG10315,GeneID:948847;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;gene_synonym=ECK4311,JW4283;locus_tag=b4320 NC_000913.3 RefSeq CDS 4548808 4549710 . + 0 ID=cds4238;Parent=gene4413;Dbxref=ASAP:ABE-0014157,UniProtKB/Swiss-Prot:P08191,Genbank:NP_418740.1,EcoGene:EG10315,GeneID:948847;Name=NP_418740.1;Note=minor fimbrial subunit%2C D-mannose specific adhesin;gbkey=CDS;gene=fimH;product=minor component of type 1 fimbriae;protein_id=NP_418740.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4549783 4549818 . + . ID=id580;Note=REP345 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4549953 4551296 . - . ID=gene4414;Dbxref=EcoGene:EG12563,GeneID:948848;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;gene_synonym=ECK4312,JW4284,yjiB;locus_tag=b4321 NC_000913.3 RefSeq CDS 4549953 4551296 . - 0 ID=cds4239;Parent=gene4414;Dbxref=ASAP:ABE-0014161,UniProtKB/Swiss-Prot:P0AC94,Genbank:NP_418741.1,EcoGene:EG12563,GeneID:948848;Name=NP_418741.1;Note=gluconate transport system permease 3;gbkey=CDS;gene=gntP;product=fructuronate transporter;protein_id=NP_418741.1;transl_table=11 NC_000913.3 RefSeq gene 4551636 4552820 . + . ID=gene4415;Dbxref=EcoGene:EG11066,GeneID:947082;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;gene_synonym=ECK4313,JW4285;locus_tag=b4322 NC_000913.3 RefSeq CDS 4551636 4552820 . + 0 ID=cds4240;Parent=gene4415;Dbxref=ASAP:ABE-0014173,UniProtKB/Swiss-Prot:P24215,Genbank:NP_418742.1,EcoGene:EG11066,GeneID:947082;Name=NP_418742.1;gbkey=CDS;gene=uxuA;product=mannonate hydrolase;protein_id=NP_418742.1;transl_table=11 NC_000913.3 RefSeq gene 4552901 4554361 . + . ID=gene4416;Dbxref=EcoGene:EG20248,GeneID:946795;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;gene_synonym=ECK4314,JW4286;locus_tag=b4323 NC_000913.3 RefSeq CDS 4552901 4554361 . + 0 ID=cds4241;Parent=gene4416;Dbxref=ASAP:ABE-0014175,UniProtKB/Swiss-Prot:P39160,Genbank:NP_418743.1,EcoGene:EG20248,GeneID:946795;Name=NP_418743.1;Note=D-mannonate oxidoreductase;gbkey=CDS;gene=uxuB;product=D-mannonate oxidoreductase%2C NAD-dependent;protein_id=NP_418743.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4554505 4554538 . + . ID=id581;Note=REP346 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4554576 4555349 . + . ID=gene4417;Dbxref=EcoGene:EG20249,GeneID:948849;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;gene_synonym=ECK4315,JW4287;locus_tag=b4324 NC_000913.3 RefSeq CDS 4554576 4555349 . + 0 ID=cds4242;Parent=gene4417;Dbxref=ASAP:ABE-0014179,UniProtKB/Swiss-Prot:P39161,Genbank:NP_418744.1,EcoGene:EG20249,GeneID:948849;Name=NP_418744.1;Note=regulator for uxu operon;gbkey=CDS;gene=uxuR;product=fructuronate-inducible hexuronate regulon transcriptional repressor%3B autorepressor;protein_id=NP_418744.1;transl_table=11 NC_000913.3 RefSeq gene 4555490 4556320 . - . ID=gene4418;Dbxref=EcoGene:EG12564,GeneID:948850;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;gene_synonym=ECK4316,JW4288;locus_tag=b4325 NC_000913.3 RefSeq CDS 4555490 4556320 . - 0 ID=cds4243;Parent=gene4418;Dbxref=ASAP:ABE-0014181,UniProtKB/Swiss-Prot:P39374,Genbank:NP_418745.3,EcoGene:EG12564,GeneID:948850;Name=NP_418745.3;gbkey=CDS;gene=yjiC;product=uncharacterized protein;protein_id=NP_418745.3;transl_table=11 NC_000913.3 RefSeq gene 4556993 4557385 . + . ID=gene4419;Dbxref=EcoGene:EG12565,GeneID:948851;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;gene_synonym=ECK4317,JW5782,yjiD;locus_tag=b4326 NC_000913.3 RefSeq CDS 4556993 4557385 . + 0 ID=cds4244;Parent=gene4419;Dbxref=ASAP:ABE-0014190,UniProtKB/Swiss-Prot:P39375,Genbank:NP_418746.4,EcoGene:EG12565,GeneID:948851;Name=NP_418746.4;gbkey=CDS;gene=iraD;product=RpoS stabilzer after DNA damage%2C anti-RssB factor;protein_id=NP_418746.4;transl_table=11 NC_000913.3 RefSeq gene 4557378 4558289 . - . ID=gene4420;Dbxref=EcoGene:EG12566,GeneID:948852;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=ECK4318,JW4290,qseD,yjiE;locus_tag=b4327 NC_000913.3 RefSeq CDS 4557378 4558289 . - 0 ID=cds4245;Parent=gene4420;Dbxref=ASAP:ABE-0014192,UniProtKB/Swiss-Prot:P39376,Genbank:NP_418747.1,EcoGene:EG12566,GeneID:948852;Name=NP_418747.1;Note=putative transcriptional regulator LYSR-type;gbkey=CDS;gene=hypT;product=hypochlorite-responsive transcription factor;protein_id=NP_418747.1;transl_table=11 NC_000913.3 RefSeq gene 4558354 4559526 . - . ID=gene4421;Dbxref=EcoGene:EG12567,GeneID:948853;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;gene_synonym=ECK4319,JW4291,yjiF;locus_tag=b4328 NC_000913.3 RefSeq CDS 4558354 4559526 . - 0 ID=cds4246;Parent=gene4421;Dbxref=ASAP:ABE-0014195,UniProtKB/Swiss-Prot:P39377,Genbank:NP_418748.1,EcoGene:EG12567,GeneID:948853;Name=NP_418748.1;gbkey=CDS;gene=iadA;product=isoaspartyl dipeptidase;protein_id=NP_418748.1;transl_table=11 NC_000913.3 RefSeq gene 4559539 4560000 . - . ID=gene4422;Dbxref=EcoGene:EG12568,GeneID:948854;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;gene_synonym=ECK4320,JW4292;locus_tag=b4329 NC_000913.3 RefSeq CDS 4559539 4560000 . - 0 ID=cds4247;Parent=gene4422;Dbxref=ASAP:ABE-0014197,UniProtKB/Swiss-Prot:P0AEH8,Genbank:NP_418749.1,EcoGene:EG12568,GeneID:948854;Name=NP_418749.1;gbkey=CDS;gene=yjiG;product=SpmB family inner membrane protein;protein_id=NP_418749.1;transl_table=11 NC_000913.3 RefSeq gene 4559997 4560680 . - . ID=gene4423;Dbxref=EcoGene:EG12569,GeneID:948856;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;gene_synonym=ECK4321,JW5783;locus_tag=b4330 NC_000913.3 RefSeq CDS 4559997 4560680 . - 0 ID=cds4248;Parent=gene4423;Dbxref=ASAP:ABE-0014201,UniProtKB/Swiss-Prot:P39379,Genbank:NP_418750.2,EcoGene:EG12569,GeneID:948856;Name=NP_418750.2;gbkey=CDS;gene=yjiH;product=nucleoside recognition pore and gate family putative inner membrane transporter;protein_id=NP_418750.2;transl_table=11 NC_000913.3 RefSeq gene 4560930 4561484 . + . ID=gene4424;Dbxref=EcoGene:EG12570,GeneID:948858;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;gene_synonym=ECK4322,JW5784,yjiI;locus_tag=b4331 NC_000913.3 RefSeq CDS 4560930 4561484 . + 0 ID=cds4249;Parent=gene4424;Dbxref=ASAP:ABE-0014204,UniProtKB/Swiss-Prot:P39380,Genbank:NP_418751.4,EcoGene:EG12570,GeneID:948858;Name=NP_418751.4;gbkey=CDS;gene=kptA;product=RNA 2'-phosphotransferase;protein_id=NP_418751.4;transl_table=11 NC_000913.3 RefSeq gene 4561497 4562675 . - . ID=gene4425;Dbxref=EcoGene:EG12571,GeneID:948859;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;gene_synonym=ECK4323,JW4295;locus_tag=b4332 NC_000913.3 RefSeq CDS 4561497 4562675 . - 0 ID=cds4250;Parent=gene4425;Dbxref=ASAP:ABE-0014206,UniProtKB/Swiss-Prot:P39381,Genbank:NP_418752.1,EcoGene:EG12571,GeneID:948859;Name=NP_418752.1;Note=putative transport protein;gbkey=CDS;gene=yjiJ;product=DUF1228 family putative inner membrane MFS superfamily transporter;protein_id=NP_418752.1;transl_table=11 NC_000913.3 RefSeq gene 4562743 4563603 . - . ID=gene4426;Dbxref=EcoGene:EG12572,GeneID:948957;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;gene_synonym=ECK4324,JW5869;locus_tag=b4333 NC_000913.3 RefSeq CDS 4562743 4563603 . - 0 ID=cds4251;Parent=gene4426;Dbxref=ASAP:ABE-0014209,UniProtKB/Swiss-Prot:P39382,Genbank:NP_418753.3,EcoGene:EG12572,GeneID:948957;Name=NP_418753.3;gbkey=CDS;gene=yjiK;product=SdiA-regulated family putative membrane-anchored protein%3B putative phytase-like esterase;protein_id=NP_418753.3;transl_table=11 NC_000913.3 RefSeq gene 4563922 4564689 . - . ID=gene4427;Dbxref=EcoGene:EG12573,GeneID:948837;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;gene_synonym=ECK4325,JW5785;locus_tag=b4334 NC_000913.3 RefSeq CDS 4563922 4564689 . - 0 ID=cds4252;Parent=gene4427;Dbxref=ASAP:ABE-0014212,UniProtKB/Swiss-Prot:P39383,Genbank:NP_418754.2,EcoGene:EG12573,GeneID:948837;Name=NP_418754.2;Note=putative enzyme;gbkey=CDS;gene=yjiL;product=putative ATPase%2C activator of (R)-hydroxyglutaryl-CoA dehydratase;protein_id=NP_418754.2;transl_table=11 NC_000913.3 RefSeq gene 4564699 4565850 . - . ID=gene4428;Dbxref=EcoGene:EG12574,GeneID:945789;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;gene_synonym=ECK4326,JW5786;locus_tag=b4335 NC_000913.3 RefSeq CDS 4564699 4565850 . - 0 ID=cds4253;Parent=gene4428;Dbxref=ASAP:ABE-0014214,UniProtKB/Swiss-Prot:P39384,Genbank:NP_418755.4,EcoGene:EG12574,GeneID:945789;Name=NP_418755.4;gbkey=CDS;gene=yjiM;product=putative 2-hydroxyglutaryl-CoA dehydratase;protein_id=NP_418755.4;transl_table=11 NC_000913.3 RefSeq gene 4565966 4567246 . - . ID=gene4429;Dbxref=EcoGene:EG12575,GeneID:948860;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;gene_synonym=ECK4327,JW4299;locus_tag=b4336 NC_000913.3 RefSeq CDS 4565966 4567246 . - 0 ID=cds4254;Parent=gene4429;Dbxref=ASAP:ABE-0014219,UniProtKB/Swiss-Prot:P39385,Genbank:NP_418756.1,EcoGene:EG12575,GeneID:948860;Name=NP_418756.1;gbkey=CDS;gene=yjiN;product=zinc-type alcohol dehydrogenase-like protein;protein_id=NP_418756.1;transl_table=11 NC_000913.3 RefSeq gene 4567287 4568519 . - . ID=gene4430;Dbxref=EcoGene:EG12576,GeneID:948861;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;gene_synonym=ECK4328,JW4300,yjiO;locus_tag=b4337 NC_000913.3 RefSeq CDS 4567287 4568519 . - 0 ID=cds4255;Parent=gene4430;Dbxref=ASAP:ABE-0014221,UniProtKB/Swiss-Prot:P39386,Genbank:NP_418757.1,EcoGene:EG12576,GeneID:948861;Name=NP_418757.1;Note=putative transport protein;gbkey=CDS;gene=mdtM;product=multidrug efflux system protein;protein_id=NP_418757.1;transl_table=11 NC_000913.3 RefSeq gene 4568998 4569918 . + . ID=gene4431;Dbxref=EcoGene:EG12577,GeneID:948866;Name=yjiP;gbkey=Gene;gene=yjiP;gene_biotype=pseudogene;gene_synonym=ECK4329,JW5953,yjiQ;locus_tag=b4339;pseudo=true NC_000913.3 RefSeq CDS 4568998 4569918 . + 0 ID=cds4256;Parent=gene4431;Dbxref=ASAP:ABE-0014227,ASAP:ABE-0014229,UniProtKB/Swiss-Prot:P39387,EcoGene:EG12577,GeneID:948866;Note=pseudogene%2C transposase_31 family protein;gbkey=CDS;gene=yjiP;pseudo=true;transl_table=11 NC_000913.3 RefSeq repeat_region 4569946 4570044 . + . ID=id582;Note=RIP347 (repetitive extragenic palindromic) element%3B contains 2 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4570162 4571574 . - . ID=gene4432;Dbxref=EcoGene:EG12579,GeneID:949089;Name=yjiR;gbkey=Gene;gene=yjiR;gene_biotype=protein_coding;gene_synonym=ECK4331,JW4303;locus_tag=b4340 NC_000913.3 RefSeq CDS 4570162 4571574 . - 0 ID=cds4257;Parent=gene4432;Dbxref=ASAP:ABE-0014232,UniProtKB/Swiss-Prot:P39389,Genbank:NP_418760.1,EcoGene:EG12579,GeneID:949089;Name=NP_418760.1;Note=putative regulator;gbkey=CDS;gene=yjiR;product=putative DNA-binding transcriptional regulator/putative aminotransferase;protein_id=NP_418760.1;transl_table=11 NC_000913.3 RefSeq gene 4571751 4571915 . + . ID=gene4433;Dbxref=EcoGene:EG12580,GeneID:948903;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;gene_synonym=ECK4332,JW4304;locus_tag=b4341 NC_000913.3 RefSeq CDS 4571751 4571915 . + 0 ID=cds4258;Parent=gene4433;Dbxref=ASAP:ABE-0014236,UniProtKB/Swiss-Prot:P39390,Genbank:NP_418761.1,EcoGene:EG12580,GeneID:948903;Name=NP_418761.1;gbkey=CDS;gene=yjiS;product=DUF1127 family protein;protein_id=NP_418761.1;transl_table=11 NC_000913.3 RefSeq gene 4572414 4573916 . + . ID=gene4434;Dbxref=EcoGene:EG12581,GeneID:945056;Name=yjiT;gbkey=Gene;gene=yjiT;gene_biotype=pseudogene;gene_synonym=ECK4333,JW5787;locus_tag=b4342;pseudo=true NC_000913.3 RefSeq CDS 4572414 4573916 . + 0 ID=cds4259;Parent=gene4434;Dbxref=ASAP:ABE-0014239,UniProtKB/Swiss-Prot:P39391,EcoGene:EG12581,GeneID:945056;Note=pseudogene;gbkey=CDS;gene=yjiT;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4573919 4576855 . + . ID=gene4435;Dbxref=EcoGene:EG12583,GeneID:2847669;Name=yjiV;gbkey=Gene;gene=yjiV;gene_biotype=pseudogene;gene_synonym=ECK4467,mcrD,yjiU;locus_tag=b4486;pseudo=true NC_000913.3 RefSeq CDS 4573919 4576855 . + 0 ID=cds4260;Parent=gene4435;Dbxref=ASAP:ABE-0174119,UniProtKB/Swiss-Prot:P39393,EcoGene:EG12583,GeneID:2847669;Note=pseudogene~conserved hypothetical protein;gbkey=CDS;gene=yjiV;pseudo=true;transl_table=11 NC_000913.3 RefSeq gene 4576912 4577958 . - . ID=gene4436;Dbxref=EcoGene:EG10575,GeneID:948880;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;gene_synonym=ECK4335,JW5789;locus_tag=b4345 NC_000913.3 RefSeq CDS 4576912 4577958 . - 0 ID=cds4261;Parent=gene4436;Dbxref=ASAP:ABE-0014248,UniProtKB/Swiss-Prot:P15006,Genbank:NP_418765.1,EcoGene:EG10575,GeneID:948880;Name=NP_418765.1;Note=component of McrBC 5-methylcytosine restriction system%2C expands range of sequences restricted;gbkey=CDS;gene=mcrC;product=5-methylcytosine-specific restriction enzyme McrBC%2C subunit McrC;protein_id=NP_418765.1;transl_table=11 NC_000913.3 RefSeq gene 4577958 4579337 . - . ID=gene4437;Dbxref=EcoGene:EG10574,GeneID:949122;Name=mcrB;gbkey=Gene;gene=mcrB;gene_biotype=protein_coding;gene_synonym=ECK4336,JW5871,rglB;locus_tag=b4346 NC_000913.3 RefSeq CDS 4577958 4579337 . - 0 ID=cds4262;Parent=gene4437;Dbxref=ASAP:ABE-0014250,UniProtKB/Swiss-Prot:P15005,Genbank:NP_418766.4,EcoGene:EG10574,GeneID:949122;Name=NP_418766.4;Note=component of McrBC 5-methylcytosine restriction system;gbkey=CDS;gene=mcrB;product=5-methylcytosine-specific restriction enzyme McrBC%2C subunit McrB;protein_id=NP_418766.4;transl_table=11 NC_000913.3 RefSeq gene 4579499 4579840 . - . ID=gene4438;Dbxref=EcoGene:EG12584,GeneID:949088;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;gene_synonym=dinL,ECK4337,JW4310,sosC,yjiW;locus_tag=b4347 NC_000913.3 RefSeq CDS 4579499 4579840 . - 0 ID=cds4263;Parent=gene4438;Dbxref=ASAP:ABE-0014253,UniProtKB/Swiss-Prot:P39394,Genbank:NP_418767.4,EcoGene:EG12584,GeneID:949088;Name=NP_418767.4;gbkey=CDS;gene=symE;product=toxic peptide regulated by antisense sRNA symR;protein_id=NP_418767.4;transl_table=11 NC_000913.3 RefSeq gene 4579835 4579911 . + . ID=gene4439;Dbxref=EcoGene:EG31180,GeneID:5061533;Name=symR;gbkey=Gene;gene=symR;gene_biotype=antisense_RNA;gene_synonym=ECK4432,ryjC;locus_tag=b4625 NC_000913.3 RefSeq ncRNA 4579835 4579911 . + . ID=rna174;Parent=gene4439;Dbxref=EcoGene:EG31180,GeneID:5061533;gbkey=ncRNA;gene=symR;ncrna_class=antisense_RNA;product=sRNA antisense regulator destabilizing divergent and overlapping symE mRNA NC_000913.3 RefSeq exon 4579835 4579911 . + . ID=id583;Parent=rna174;Dbxref=EcoGene:EG31180,GeneID:5061533;gbkey=ncRNA;gene=symR;ncrna_class=antisense_RNA;product=sRNA antisense regulator destabilizing divergent and overlapping symE mRNA NC_000913.3 RefSeq gene 4580068 4581462 . - . ID=gene4440;Dbxref=EcoGene:EG10460,GeneID:948867;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;gene_synonym=ECK4338,hsp,hss,JW4311;locus_tag=b4348 NC_000913.3 RefSeq CDS 4580068 4581462 . - 0 ID=cds4264;Parent=gene4440;Dbxref=ASAP:ABE-0014258,UniProtKB/Swiss-Prot:P05719,Genbank:NP_418768.1,EcoGene:EG10460,GeneID:948867;Name=NP_418768.1;gbkey=CDS;gene=hsdS;product=specificity determinant for hsdM and hsdR;protein_id=NP_418768.1;transl_table=11 NC_000913.3 RefSeq gene 4581459 4583048 . - . ID=gene4441;Dbxref=EcoGene:EG10458,GeneID:948872;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;gene_synonym=ECK4339,hsm,hsp,JW4312;locus_tag=b4349 NC_000913.3 RefSeq CDS 4581459 4583048 . - 0 ID=cds4265;Parent=gene4441;Dbxref=ASAP:ABE-0014260,UniProtKB/Swiss-Prot:P08957,Genbank:NP_418769.1,EcoGene:EG10458,GeneID:948872;Name=NP_418769.1;Note=host modification%3B DNA methylase M;gbkey=CDS;gene=hsdM;product=DNA methyltransferase M;protein_id=NP_418769.1;transl_table=11 NC_000913.3 RefSeq gene 4583249 4586761 . - . ID=gene4442;Dbxref=EcoGene:EG10459,GeneID:948878;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;gene_synonym=ECK4340,hsp,hsr,JW4313;locus_tag=b4350 NC_000913.3 RefSeq CDS 4583249 4586761 . - 0 ID=cds4266;Parent=gene4442;Dbxref=ASAP:ABE-0014264,UniProtKB/Swiss-Prot:P08956,Genbank:NP_418770.2,EcoGene:EG10459,GeneID:948878;Name=NP_418770.2;Note=host restriction%3B endonuclease R;gbkey=CDS;gene=hsdR;product=endonuclease R Type I restriction enzyme;protein_id=NP_418770.2;transl_table=11 NC_000913.3 RefSeq gene 4586949 4587863 . + . ID=gene4443;Dbxref=EcoGene:EG10612,GeneID:948898;Name=mrr;gbkey=Gene;gene=mrr;gene_biotype=protein_coding;gene_synonym=ECK4341,JW4314,mcrF;locus_tag=b4351 NC_000913.3 RefSeq CDS 4586949 4587863 . + 0 ID=cds4267;Parent=gene4443;Dbxref=ASAP:ABE-0014271,UniProtKB/Swiss-Prot:P24202,Genbank:NP_418771.1,EcoGene:EG10612,GeneID:948898;Name=NP_418771.1;Note=restriction of methylated adenine;gbkey=CDS;gene=mrr;product=methylated adenine and cytosine restriction protein;protein_id=NP_418771.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4587872 4587898 . + . ID=id584;Note=REP348 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4587909 4588865 . - . ID=gene4444;Dbxref=EcoGene:EG10021,GeneID:948882;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;gene_synonym=ECK4342,JW5790;locus_tag=b4352 NC_000913.3 RefSeq CDS 4587909 4588865 . - 0 ID=cds4268;Parent=gene4444;Dbxref=ASAP:ABE-0014273,UniProtKB/Swiss-Prot:P24203,Genbank:NP_418772.4,EcoGene:EG10021,GeneID:948882;Name=NP_418772.4;gbkey=CDS;gene=yjiA;product=metal-binding GTPase;protein_id=NP_418772.4;transl_table=11 NC_000913.3 RefSeq gene 4588876 4589079 . - . ID=gene4445;Dbxref=EcoGene:EG12585,GeneID:949090;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;gene_synonym=ECK4343,JW4316;locus_tag=b4353 NC_000913.3 RefSeq CDS 4588876 4589079 . - 0 ID=cds4269;Parent=gene4445;Dbxref=ASAP:ABE-0014276,UniProtKB/Swiss-Prot:P0ADC8,Genbank:NP_418773.1,EcoGene:EG12585,GeneID:949090;Name=NP_418773.1;gbkey=CDS;gene=yjiX;product=DUF466 family protein;protein_id=NP_418773.1;transl_table=11 NC_000913.3 RefSeq gene 4589129 4591279 . - . ID=gene4446;Dbxref=EcoGene:EG12586,GeneID:948914;Name=yjiY;gbkey=Gene;gene=yjiY;gene_biotype=protein_coding;gene_synonym=ECK4344,JW5791,oppE?;locus_tag=b4354 NC_000913.3 RefSeq CDS 4589129 4591279 . - 0 ID=cds4270;Parent=gene4446;Dbxref=ASAP:ABE-0014278,UniProtKB/Swiss-Prot:P39396,Genbank:NP_418774.2,EcoGene:EG12586,GeneID:948914;Name=NP_418774.2;Note=putative carbon starvation protein;gbkey=CDS;gene=yjiY;product=putative transporter;protein_id=NP_418774.2;transl_table=11 NC_000913.3 RefSeq gene 4591657 4593312 . + . ID=gene4447;Dbxref=EcoGene:EG11034,GeneID:948884;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;gene_synonym=cheD,ECK4345,JW4318;locus_tag=b4355 NC_000913.3 RefSeq CDS 4591657 4593312 . + 0 ID=cds4271;Parent=gene4447;Dbxref=ASAP:ABE-0014282,UniProtKB/Swiss-Prot:P02942,Genbank:NP_418775.1,EcoGene:EG11034,GeneID:948884;Name=NP_418775.1;gbkey=CDS;gene=tsr;product=methyl-accepting chemotaxis protein I%2C serine sensor receptor;protein_id=NP_418775.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4593326 4593351 . + . ID=id585;Note=REP349 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4593361 4594722 . - . ID=gene4448;Dbxref=EcoGene:EG12588,GeneID:948879;Name=lgoT;gbkey=Gene;gene=lgoT;gene_biotype=protein_coding;gene_synonym=ECK4346,JW4319,yjiZ,yjjL;locus_tag=b4356 NC_000913.3 RefSeq CDS 4593361 4594722 . - 0 ID=cds4272;Parent=gene4448;Dbxref=ASAP:ABE-0014284,UniProtKB/Swiss-Prot:P39398,Genbank:NP_418776.1,EcoGene:EG12588,GeneID:948879;Name=NP_418776.1;Note=putative transport protein%2C cryptic%2C orf%2C joins former yjiZ and yjjL;gbkey=CDS;gene=lgoT;product=putative L-galactonate:H+ symporter;protein_id=NP_418776.1;transl_table=11 NC_000913.3 RefSeq gene 4594937 4595851 . - . ID=gene4449;Dbxref=EcoGene:EG12589,GeneID:948881;Name=lgoR;gbkey=Gene;gene=lgoR;gene_biotype=protein_coding;gene_synonym=ECK4347,JW5792,yjjM;locus_tag=b4357 NC_000913.3 RefSeq CDS 4594937 4595851 . - 0 ID=cds4273;Parent=gene4449;Dbxref=ASAP:ABE-0014287,UniProtKB/Swiss-Prot:P39399,Genbank:YP_026290.1,EcoGene:EG12589,GeneID:948881;Name=YP_026290.1;gbkey=CDS;gene=lgoR;product=putative transcriptional activator for L-galactonate catabolism;protein_id=YP_026290.1;transl_table=11 NC_000913.3 RefSeq gene 4595990 4597012 . + . ID=gene4450;Dbxref=EcoGene:EG12590,GeneID:948883;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;gene_synonym=ECK4348,JW5793,yjjN;locus_tag=b4358 NC_000913.3 RefSeq CDS 4595990 4597012 . + 0 ID=cds4274;Parent=gene4450;Dbxref=ASAP:ABE-0014294,UniProtKB/Swiss-Prot:P39400,Genbank:NP_418778.4,EcoGene:EG12590,GeneID:948883;Name=NP_418778.4;Note=putative oxidoreductase;gbkey=CDS;gene=lgoD;product=L-galactonate oxidoreductase%3B L-gulonate oxidoreductase;protein_id=NP_418778.4;transl_table=11 NC_000913.3 RefSeq repeat_region 4597097 4597135 . + . ID=id586;Note=REP350 (repetitive extragenic palindromic) element%3B contains 1 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4597150 4599441 . - . ID=gene4451;Dbxref=EcoGene:EG12591,GeneID:948888;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;gene_synonym=ECK4349,JW5794,mdoB,yjjO;locus_tag=b4359 NC_000913.3 RefSeq CDS 4597150 4599441 . - 0 ID=cds4275;Parent=gene4451;Dbxref=ASAP:ABE-0014297,UniProtKB/Swiss-Prot:P39401,Genbank:NP_418779.2,EcoGene:EG12591,GeneID:948888;Name=NP_418779.2;gbkey=CDS;gene=opgB;product=OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane-bound) and II (soluble);protein_id=NP_418779.2;transl_table=11 NC_000913.3 RefSeq gene 4599695 4600189 . - . ID=gene4452;Dbxref=EcoGene:EG11214,GeneID:948887;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;gene_synonym=ECK4350,JW5795;locus_tag=b4360 NC_000913.3 RefSeq CDS 4599695 4600189 . - 0 ID=cds4276;Parent=gene4452;Dbxref=ASAP:ABE-0014301,UniProtKB/Swiss-Prot:P18390,Genbank:NP_418780.2,EcoGene:EG11214,GeneID:948887;Name=NP_418780.2;Note=putative glycoprotein/receptor;gbkey=CDS;gene=yjjA;product=putative DUF2501 family periplasmic protein;protein_id=NP_418780.2;transl_table=11 NC_000913.3 RefSeq gene 4600238 4600975 . - . ID=gene4453;Dbxref=EcoGene:EG10237,GeneID:948864;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;gene_synonym=dnaD,ECK4351,JW4325;locus_tag=b4361 NC_000913.3 RefSeq CDS 4600238 4600975 . - 0 ID=cds4277;Parent=gene4453;Dbxref=ASAP:ABE-0014304,UniProtKB/Swiss-Prot:P0AEF0,Genbank:NP_418781.1,EcoGene:EG10237,GeneID:948864;Name=NP_418781.1;Note=chromosome replication%3B initiation and chain elongation;gbkey=CDS;gene=dnaC;product=DNA biosynthesis protein;protein_id=NP_418781.1;transl_table=11 NC_000913.3 RefSeq gene 4600978 4601517 . - . ID=gene4454;Dbxref=EcoGene:EG10244,GeneID:948813;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;gene_synonym=ECK4352,JW4326;locus_tag=b4362 NC_000913.3 RefSeq CDS 4600978 4601517 . - 0 ID=cds4278;Parent=gene4454;Dbxref=ASAP:ABE-0014306,UniProtKB/Swiss-Prot:P0A8J2,Genbank:NP_418782.1,EcoGene:EG10244,GeneID:948813;Name=NP_418782.1;Note=DNA biosynthesis%3B primosomal protein i;gbkey=CDS;gene=dnaT;product=DNA biosynthesis protein (primosomal protein I);protein_id=NP_418782.1;transl_table=11 NC_000913.3 RefSeq gene 4601624 4602097 . - . ID=gene4455;Dbxref=EcoGene:EG11215,GeneID:948811;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;gene_synonym=ECK4353,JW4327;locus_tag=b4363 NC_000913.3 RefSeq CDS 4601624 4602097 . - 0 ID=cds4279;Parent=gene4455;Dbxref=ASAP:ABE-0014310,UniProtKB/Swiss-Prot:P0ADD2,Genbank:NP_418783.2,EcoGene:EG11215,GeneID:948811;Name=NP_418783.2;gbkey=CDS;gene=yjjB;product=DUF3815 family inner membrane protein;protein_id=NP_418783.2;transl_table=11 NC_000913.3 RefSeq gene 4602088 4602858 . - . ID=gene4456;Dbxref=EcoGene:EG12592,GeneID:948812;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;gene_synonym=ECK4354,JW5796;locus_tag=b4364 NC_000913.3 RefSeq CDS 4602088 4602858 . - 0 ID=cds4280;Parent=gene4456;Dbxref=ASAP:ABE-0014313,UniProtKB/Swiss-Prot:P0ADD5,Genbank:NP_418784.4,EcoGene:EG12592,GeneID:948812;Name=NP_418784.4;Note=putative structural protein;gbkey=CDS;gene=yjjP;product=DUF1212 family inner membrane protein;protein_id=NP_418784.4;transl_table=11 NC_000913.3 RefSeq gene 4603477 4604202 . + . ID=gene4457;Dbxref=EcoGene:EG12593,GeneID:948896;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=protein_coding;gene_synonym=ECK4355,JW4329;locus_tag=b4365 NC_000913.3 RefSeq CDS 4603477 4604202 . + 0 ID=cds4281;Parent=gene4457;Dbxref=ASAP:ABE-0014322,UniProtKB/Swiss-Prot:P0ADD7,Genbank:NP_418785.1,EcoGene:EG12593,GeneID:948896;Name=NP_418785.1;Note=putative regulator;gbkey=CDS;gene=yjjQ;product=putative transcriptional regulator;protein_id=NP_418785.1;transl_table=11 NC_000913.3 RefSeq gene 4604160 4604837 . + . ID=gene4458;Dbxref=EcoGene:EG12594,GeneID:948889;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;gene_synonym=ECK4356,JW5955,yjjR;locus_tag=b4366 NC_000913.3 RefSeq CDS 4604160 4604837 . + 0 ID=cds4282;Parent=gene4458;Dbxref=ASAP:ABE-0014324,UniProtKB/Swiss-Prot:P39404,Genbank:NP_418786.4,EcoGene:EG12594,GeneID:948889;Name=NP_418786.4;Note=2-component transcriptional regulator;gbkey=CDS;gene=bglJ;product=bgl operon transcriptional activator;protein_id=NP_418786.4;transl_table=11 NC_000913.3 RefSeq gene 4604875 4605663 . - . ID=gene4459;Dbxref=EcoGene:EG12595,GeneID:948891;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;gene_synonym=ECK4357,JW4331,yjjS;locus_tag=b4367 NC_000913.3 RefSeq CDS 4604875 4605663 . - 0 ID=cds4283;Parent=gene4459;Dbxref=ASAP:ABE-0014326,UniProtKB/Swiss-Prot:P39405,Genbank:NP_418787.1,EcoGene:EG12595,GeneID:948891;Name=NP_418787.1;gbkey=CDS;gene=fhuF;product=ferric iron reductase involved in ferric hydroximate transport;protein_id=NP_418787.1;transl_table=11 NC_000913.3 RefSeq gene 4605804 4606040 . + . ID=gene4460;Dbxref=EcoGene:EG13348,GeneID:1450313;Name=yjjZ;gbkey=Gene;gene=yjjZ;gene_biotype=protein_coding;gene_synonym=ECK4358,JW5797;locus_tag=b4567 NC_000913.3 RefSeq CDS 4605804 4606040 . + 0 ID=cds4284;Parent=gene4460;Dbxref=ASAP:ABE-0285088,UniProtKB/Swiss-Prot:P55914,Genbank:YP_588478.1,EcoGene:EG13348,GeneID:1450313;Name=YP_588478.1;gbkey=CDS;gene=yjjZ;product=uncharacterized protein;protein_id=YP_588478.1;transl_table=11 NC_000913.3 RefSeq gene 4606079 4606165 . - . ID=gene4461;Dbxref=EcoGene:EG30051,GeneID:948873;Name=leuV;gbkey=Gene;gene=leuV;gene_biotype=tRNA;gene_synonym=ECK4359,JWR0221,leuValpha;locus_tag=b4368 NC_000913.3 RefSeq tRNA 4606079 4606165 . - . ID=rna175;Parent=gene4461;Dbxref=ASAP:ABE-0014329,EcoGene:EG30051,GeneID:948873;Note=anticodon: CAG;gbkey=tRNA;gene=leuV;product=tRNA-Leu NC_000913.3 RefSeq exon 4606079 4606165 . - . ID=id587;Parent=rna175;Dbxref=ASAP:ABE-0014329,EcoGene:EG30051,GeneID:948873;Note=anticodon: CAG;gbkey=tRNA;gene=leuV;product=tRNA-Leu NC_000913.3 RefSeq gene 4606200 4606286 . - . ID=gene4462;Dbxref=EcoGene:EG30047,GeneID:948875;Name=leuP;gbkey=Gene;gene=leuP;gene_biotype=tRNA;gene_synonym=ECK4360,JWR0222,leuVbeta;locus_tag=b4369 NC_000913.3 RefSeq tRNA 4606200 4606286 . - . ID=rna176;Parent=gene4462;Dbxref=ASAP:ABE-0014331,EcoGene:EG30047,GeneID:948875;Note=anticodon: CAG;gbkey=tRNA;gene=leuP;product=tRNA-Leu NC_000913.3 RefSeq exon 4606200 4606286 . - . ID=id588;Parent=rna176;Dbxref=ASAP:ABE-0014331,EcoGene:EG30047,GeneID:948875;Note=anticodon: CAG;gbkey=tRNA;gene=leuP;product=tRNA-Leu NC_000913.3 RefSeq gene 4606315 4606401 . - . ID=gene4463;Dbxref=EcoGene:EG30048,GeneID:948893;Name=leuQ;gbkey=Gene;gene=leuQ;gene_biotype=tRNA;gene_synonym=ECK4361,JWR0223,leuVgamma;locus_tag=b4370 NC_000913.3 RefSeq tRNA 4606315 4606401 . - . ID=rna177;Parent=gene4463;Dbxref=ASAP:ABE-0014333,EcoGene:EG30048,GeneID:948893;Note=anticodon: CAG;gbkey=tRNA;gene=leuQ;product=tRNA-Leu NC_000913.3 RefSeq exon 4606315 4606401 . - . ID=id589;Parent=rna177;Dbxref=ASAP:ABE-0014333,EcoGene:EG30048,GeneID:948893;Note=anticodon: CAG;gbkey=tRNA;gene=leuQ;product=tRNA-Leu NC_000913.3 RefSeq repeat_region 4606558 4606649 . + . ID=id590;Note=REP351 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4606669 4607700 . - . ID=gene4464;Dbxref=EcoGene:EG12596,GeneID:948892;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;gene_synonym=ECK4362,JW4333,yjjT;locus_tag=b4371 NC_000913.3 RefSeq CDS 4606669 4607700 . - 0 ID=cds4285;Parent=gene4464;Dbxref=ASAP:ABE-0014336,UniProtKB/Swiss-Prot:P39406,Genbank:NP_418788.1,EcoGene:EG12596,GeneID:948892;Name=NP_418788.1;gbkey=CDS;gene=rsmC;product=16S rRNA m(2)G1207 methyltransferase%2C SAM-dependent;protein_id=NP_418788.1;transl_table=11 NC_000913.3 RefSeq gene 4607803 4608216 . + . ID=gene4465;Dbxref=EcoGene:EG11414,GeneID:948890;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;gene_synonym=ECK4363,JW4334;locus_tag=b4372 NC_000913.3 RefSeq CDS 4607803 4608216 . + 0 ID=cds4286;Parent=gene4465;Dbxref=ASAP:ABE-0014340,UniProtKB/Swiss-Prot:P28632,Genbank:NP_418789.1,EcoGene:EG11414,GeneID:948890;Name=NP_418789.1;gbkey=CDS;gene=holD;product=DNA polymerase III%2C psi subunit;protein_id=NP_418789.1;transl_table=11 NC_000913.3 RefSeq gene 4608185 4608631 . + . ID=gene4466;Dbxref=EcoGene:EG10850,GeneID:948894;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;gene_synonym=ECK4364,JW4335;locus_tag=b4373 NC_000913.3 RefSeq CDS 4608185 4608631 . + 0 ID=cds4287;Parent=gene4466;Dbxref=ASAP:ABE-0014342,UniProtKB/Swiss-Prot:P0A944,Genbank:NP_418790.1,EcoGene:EG10850,GeneID:948894;Name=NP_418790.1;Note=acyltransferase for 30S ribosomal subunit protein S18%3B acetylation of N-terminal alanine;gbkey=CDS;gene=rimI;product=ribosomal-protein-S18-alanine N-acetyltransferase;protein_id=NP_418790.1;transl_table=11 NC_000913.3 RefSeq gene 4608646 4609323 . + . ID=gene4467;Dbxref=EcoGene:EG12115,GeneID:948899;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;gene_synonym=ECK4365,JW4336;locus_tag=b4374 NC_000913.3 RefSeq CDS 4608646 4609323 . + 0 ID=cds4288;Parent=gene4467;Dbxref=ASAP:ABE-0014344,UniProtKB/Swiss-Prot:P0A8Y1,Genbank:NP_418791.1,EcoGene:EG12115,GeneID:948899;Name=NP_418791.1;Note=putative phosphatase;gbkey=CDS;gene=yjjG;product=dUMP phosphatase;protein_id=NP_418791.1;transl_table=11 NC_000913.3 RefSeq gene 4609414 4611003 . + . ID=gene4468;Dbxref=EcoGene:EG12114,GeneID:948897;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;gene_synonym=ECK4366,JW5873,miaD,sra,srb,tos;locus_tag=b4375 NC_000913.3 RefSeq CDS 4609414 4611003 . + 0 ID=cds4289;Parent=gene4468;Dbxref=ASAP:ABE-0014346,UniProtKB/Swiss-Prot:P0A7I4,Genbank:NP_418792.1,EcoGene:EG12114,GeneID:948897;Name=NP_418792.1;gbkey=CDS;gene=prfC;product=peptide chain release factor RF-3;protein_id=NP_418792.1;transl_table=11 NC_000913.3 RefSeq gene 4611396 4612001 . + . ID=gene4469;Dbxref=EcoGene:EG11391,GeneID:948895;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;gene_synonym=ECK4367,JW4338;locus_tag=b4376 NC_000913.3 RefSeq CDS 4611396 4612001 . + 0 ID=cds4290;Parent=gene4469;Dbxref=ASAP:ABE-0014348,UniProtKB/Swiss-Prot:P0AFH8,Genbank:NP_418793.1,EcoGene:EG11391,GeneID:948895;Name=NP_418793.1;Note=hyperosmotically inducible periplasmic protein;gbkey=CDS;gene=osmY;product=salt-inducible putative ABC transporter periplasmic binding protein;protein_id=NP_418793.1;transl_table=11 NC_000913.3 RefSeq gene 4612128 4612289 . + . ID=gene4470;Dbxref=EcoGene:EG14398,GeneID:1450298;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;gene_synonym=ECK4368,JW5891;locus_tag=b4568 NC_000913.3 RefSeq CDS 4612128 4612289 . + 0 ID=cds4291;Parent=gene4470;Dbxref=ASAP:ABE-0285089,UniProtKB/Swiss-Prot:Q2M5U1,Genbank:YP_588479.2,EcoGene:EG14398,GeneID:1450298;Name=YP_588479.2;gbkey=CDS;gene=ytjA;product=uncharacterized protein;protein_id=YP_588479.2;transl_table=11 NC_000913.3 RefSeq gene 4612411 4613484 . + . ID=gene4471;Dbxref=EcoGene:EG12597,GeneID:948906;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;gene_synonym=ECK4369,JW4340;locus_tag=b4377 NC_000913.3 RefSeq CDS 4612411 4613484 . + 0 ID=cds4292;Parent=gene4471;Dbxref=ASAP:ABE-0014351,UniProtKB/Swiss-Prot:P39407,Genbank:NP_418794.1,EcoGene:EG12597,GeneID:948906;Name=NP_418794.1;gbkey=CDS;gene=yjjU;product=putative patatin-like family phospholipase;protein_id=NP_418794.1;transl_table=11 NC_000913.3 RefSeq gene 4613481 4614260 . + . ID=gene4472;Dbxref=EcoGene:EG12598,GeneID:2847741;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;gene_synonym=ECK4370,JW4341;locus_tag=b4378 NC_000913.3 RefSeq CDS 4613481 4614260 . + 0 ID=cds4293;Parent=gene4472;Dbxref=ASAP:ABE-0014356,UniProtKB/Swiss-Prot:P39408,Genbank:YP_026291.2,EcoGene:EG12598,GeneID:2847741;Name=YP_026291.2;gbkey=CDS;gene=yjjV;product=putative DNase;protein_id=YP_026291.2;transl_table=11 NC_000913.3 RefSeq repeat_region 4614257 4614644 . + . ID=id591;Note=REP352 (repetitive extragenic palindromic) element%3B contains 8 REP sequences;gbkey=repeat_region;gene=yjjV NC_000913.3 RefSeq gene 4614680 4615543 . - . ID=gene4473;Dbxref=EcoGene:EG12599,GeneID:948905;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;gene_synonym=ECK4371,JW4342;locus_tag=b4379 NC_000913.3 RefSeq CDS 4614680 4615543 . - 0 ID=cds4294;Parent=gene4473;Dbxref=ASAP:ABE-0014359,UniProtKB/Swiss-Prot:P39409,Genbank:NP_418796.1,EcoGene:EG12599,GeneID:948905;Name=NP_418796.1;Note=putative activating enzyme;gbkey=CDS;gene=yjjW;product=putative pyruvate formate lyase activating enzyme;protein_id=NP_418796.1;transl_table=11 NC_000913.3 RefSeq gene 4615515 4617065 . - . ID=gene4474;Dbxref=EcoGene:EG12171,GeneID:948904;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;gene_synonym=ECK4372,JW4343,yjjH;locus_tag=b4380 NC_000913.3 RefSeq CDS 4615515 4617065 . - 0 ID=cds4295;Parent=gene4474;Dbxref=ASAP:ABE-0014361,UniProtKB/Swiss-Prot:P37342,Genbank:NP_418797.1,EcoGene:EG12171,GeneID:948904;Name=NP_418797.1;gbkey=CDS;gene=yjjI;product=DUF3029 family protein%2C putative glycine radical enzyme;protein_id=NP_418797.1;transl_table=11 NC_000913.3 RefSeq gene 4617323 4618102 . + . ID=gene4475;Dbxref=EcoGene:EG10221,GeneID:948902;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;gene_synonym=dra,ECK4373,JW4344,thyR,tlr;locus_tag=b4381 NC_000913.3 RefSeq CDS 4617323 4618102 . + 0 ID=cds4296;Parent=gene4475;Dbxref=ASAP:ABE-0014371,UniProtKB/Swiss-Prot:P0A6L0,Genbank:NP_418798.1,EcoGene:EG10221,GeneID:948902;Name=NP_418798.1;Note=2-deoxyribose-5-phosphate aldolase;gbkey=CDS;gene=deoC;product=2-deoxyribose-5-phosphate aldolase%2C NAD(P)-linked;protein_id=NP_418798.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4618117 4618198 . + . ID=id592;Note=REP353 (repetitive extragenic palindromic) element%3B contains 2 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4618229 4619551 . + . ID=gene4476;Dbxref=EcoGene:EG10219,GeneID:948901;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;gene_synonym=ECK4374,JW4345,TP,tpp,ttg;locus_tag=b4382 NC_000913.3 RefSeq CDS 4618229 4619551 . + 0 ID=cds4297;Parent=gene4476;Dbxref=ASAP:ABE-0014374,UniProtKB/Swiss-Prot:P07650,Genbank:NP_418799.1,EcoGene:EG10219,GeneID:948901;Name=NP_418799.1;gbkey=CDS;gene=deoA;product=thymidine phosphorylase;protein_id=NP_418799.1;transl_table=11 NC_000913.3 RefSeq gene 4619603 4620826 . + . ID=gene4477;Dbxref=EcoGene:EG10220,GeneID:948910;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;gene_synonym=drm,ECK4375,JW4346,thyR,tlr;locus_tag=b4383 NC_000913.3 RefSeq CDS 4619603 4620826 . + 0 ID=cds4298;Parent=gene4477;Dbxref=ASAP:ABE-0014377,UniProtKB/Swiss-Prot:P0A6K6,Genbank:NP_418800.1,EcoGene:EG10220,GeneID:948910;Name=NP_418800.1;gbkey=CDS;gene=deoB;product=phosphopentomutase;protein_id=NP_418800.1;transl_table=11 NC_000913.3 RefSeq gene 4620883 4621602 . + . ID=gene4478;Dbxref=EcoGene:EG10222,GeneID:945654;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;gene_synonym=ECK4376,JW4347,pup;locus_tag=b4384 NC_000913.3 RefSeq CDS 4620883 4621602 . + 0 ID=cds4299;Parent=gene4478;Dbxref=ASAP:ABE-0014379,UniProtKB/Swiss-Prot:P0ABP8,Genbank:NP_418801.1,EcoGene:EG10222,GeneID:945654;Name=NP_418801.1;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase 1%3B nicotinamide 1-beta-D-riboside phosphorylase;protein_id=NP_418801.1;transl_table=11 NC_000913.3 RefSeq gene 4621769 4623100 . + . ID=gene4479;Dbxref=EcoGene:EG12342,GeneID:944883;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;gene_synonym=ECK4377,JW4348;locus_tag=b4385 NC_000913.3 RefSeq CDS 4621769 4623100 . + 0 ID=cds4300;Parent=gene4479;Dbxref=ASAP:ABE-0014383,UniProtKB/Swiss-Prot:P39410,Genbank:NP_418802.1,EcoGene:EG12342,GeneID:944883;Name=NP_418802.1;gbkey=CDS;gene=yjjJ;product=putative protein kinase;protein_id=NP_418802.1;transl_table=11 NC_000913.3 RefSeq gene 4623101 4624117 . - . ID=gene4480;Dbxref=EcoGene:EG11796,GeneID:944865;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=ECK4378,JW4349,slr,yjjF;locus_tag=b4386 NC_000913.3 RefSeq CDS 4623101 4624117 . - 0 ID=cds4301;Parent=gene4480;Dbxref=ASAP:ABE-0014385,UniProtKB/Swiss-Prot:P32099,Genbank:NP_418803.1,EcoGene:EG11796,GeneID:944865;Name=NP_418803.1;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=NP_418803.1;transl_table=11 NC_000913.3 RefSeq gene 4624145 4624789 . - . ID=gene4481;Dbxref=EcoGene:EG10951,GeneID:946089;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;gene_synonym=ECK4379,JW4350,smp;locus_tag=b4387 NC_000913.3 RefSeq CDS 4624145 4624789 . - 0 ID=cds4302;Parent=gene4481;Dbxref=ASAP:ABE-0014387,UniProtKB/Swiss-Prot:P0AGC7,Genbank:NP_418804.1,EcoGene:EG10951,GeneID:946089;Name=NP_418804.1;gbkey=CDS;gene=ytjB;product=SMP_2 family putative membrane-anchored periplasmic protein;protein_id=NP_418804.1;transl_table=11 NC_000913.3 RefSeq gene 4624895 4625863 . + . ID=gene4482;Dbxref=EcoGene:EG10945,GeneID:948913;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;gene_synonym=ECK4380,JW4351;locus_tag=b4388 NC_000913.3 RefSeq CDS 4624895 4625863 . + 0 ID=cds4303;Parent=gene4482;Dbxref=ASAP:ABE-0014393,UniProtKB/Swiss-Prot:P0AGB0,Genbank:NP_418805.1,EcoGene:EG10945,GeneID:948913;Name=NP_418805.1;gbkey=CDS;gene=serB;product=3-phosphoserine phosphatase;protein_id=NP_418805.1;transl_table=11 NC_000913.3 RefSeq gene 4625912 4627294 . + . ID=gene4483;Dbxref=EcoGene:EG11296,GeneID:948912;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;gene_synonym=ECK4381,JW4352,sms;locus_tag=b4389 NC_000913.3 RefSeq CDS 4625912 4627294 . + 0 ID=cds4304;Parent=gene4483;Dbxref=ASAP:ABE-0014395,UniProtKB/Swiss-Prot:P24554,Genbank:NP_418806.1,EcoGene:EG11296,GeneID:948912;Name=NP_418806.1;Note=probable ATP-dependent protease;gbkey=CDS;gene=radA;product=DNA repair protein;protein_id=NP_418806.1;transl_table=11 NC_000913.3 RefSeq gene 4627315 4628547 . + . ID=gene4484;Dbxref=EcoGene:EG11335,GeneID:948911;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;gene_synonym=ECK4382,JW5800,nadI,pnuA;locus_tag=b4390 NC_000913.3 RefSeq CDS 4627315 4628547 . + 0 ID=cds4305;Parent=gene4484;Dbxref=ASAP:ABE-0014397,UniProtKB/Swiss-Prot:P27278,Genbank:NP_418807.4,EcoGene:EG11335,GeneID:948911;Name=NP_418807.4;Note=probable nadAB transcriptional regulator;gbkey=CDS;gene=nadR;product=trifunctional protein: nicotinamide mononucleotide adenylyltransferase%2C ribosylnicotinamide kinase%2C transcriptional repressor;protein_id=NP_418807.4;transl_table=11 NC_000913.3 RefSeq repeat_region 4628695 4628844 . + . ID=id593;Note=RIP354 (repetitive extragenic palindromic) element%3B contains 3 REP sequences and 1 IHF site;gbkey=repeat_region NC_000913.3 RefSeq gene 4628855 4630522 . - . ID=gene4485;Dbxref=EcoGene:EG12343,GeneID:948909;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;gene_synonym=ECK4383,JW4354,yjjK;locus_tag=b4391 NC_000913.3 RefSeq CDS 4628855 4630522 . - 0 ID=cds4306;Parent=gene4485;Dbxref=ASAP:ABE-0014400,UniProtKB/Swiss-Prot:P0A9W3,Genbank:NP_418808.1,EcoGene:EG12343,GeneID:948909;Name=NP_418808.1;Note=putative ATP-binding component of a transport system;gbkey=CDS;gene=ettA;product=energy-dependent translational throttle A;protein_id=NP_418808.1;transl_table=11 NC_000913.3 RefSeq gene 4630733 4632670 . + . ID=gene4486;Dbxref=EcoGene:EG10950,GeneID:948908;Name=slt;gbkey=Gene;gene=slt;gene_biotype=protein_coding;gene_synonym=ECK4384,JW4355,sltY;locus_tag=b4392 NC_000913.3 RefSeq CDS 4630733 4632670 . + 0 ID=cds4307;Parent=gene4486;Dbxref=ASAP:ABE-0014404,UniProtKB/Swiss-Prot:P0AGC3,Genbank:NP_418809.4,EcoGene:EG10950,GeneID:948908;Name=NP_418809.4;Note=soluble lytic murein transglycosylase;gbkey=CDS;gene=slt;product=lytic murein transglycosylase%2C soluble;protein_id=NP_418809.4;transl_table=11 NC_000913.3 RefSeq gene 4632760 4633086 . + . ID=gene4487;Dbxref=EcoGene:EG11029,GeneID:948917;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;gene_synonym=ECK4385,JW4356;locus_tag=b4393 NC_000913.3 RefSeq CDS 4632760 4633086 . + 0 ID=cds4308;Parent=gene4487;Dbxref=ASAP:ABE-0014408,UniProtKB/Swiss-Prot:P0A881,Genbank:NP_418810.1,EcoGene:EG11029,GeneID:948917;Name=NP_418810.1;Note=regulator for trp operon and aroH%3B trp aporepressor;gbkey=CDS;gene=trpR;product=transcriptional repressor%2C tryptophan-binding;protein_id=NP_418810.1;transl_table=11 NC_000913.3 RefSeq repeat_region 4633091 4633230 . + . ID=id594;Note=REP355 (repetitive extragenic palindromic) element%3B contains 3 REP sequences;gbkey=repeat_region NC_000913.3 RefSeq gene 4633233 4633745 . - . ID=gene4488;Dbxref=EcoGene:EG12600,GeneID:948919;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;gene_synonym=ECK4386,JW5801;locus_tag=b4394 NC_000913.3 RefSeq CDS 4633233 4633745 . - 0 ID=cds4309;Parent=gene4488;Dbxref=ASAP:ABE-0014411,UniProtKB/Swiss-Prot:P39411,Genbank:NP_418811.2,EcoGene:EG12600,GeneID:948919;Name=NP_418811.2;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase%2C ITPase/XTPase;protein_id=NP_418811.2;transl_table=11 NC_000913.3 RefSeq gene 4633797 4634444 . + . ID=gene4489;Dbxref=EcoGene:EG12164,GeneID:948918;Name=ytjC;gbkey=Gene;gene=ytjC;gene_biotype=protein_coding;gene_synonym=ECK4387,gpmB,JW4358;locus_tag=b4395 NC_000913.3 RefSeq CDS 4633797 4634444 . + 0 ID=cds4310;Parent=gene4489;Dbxref=ASAP:ABE-0014416,UniProtKB/Swiss-Prot:P0A7A2,Genbank:NP_418812.1,EcoGene:EG12164,GeneID:948918;Name=NP_418812.1;Note=phosphoglyceromutase 2;gbkey=CDS;gene=ytjC;product=phosphatase;protein_id=NP_418812.1;transl_table=11 NC_000913.3 RefSeq gene 4634441 4635310 . - . ID=gene4490;Dbxref=EcoGene:EG11366,GeneID:948916;Name=rob;gbkey=Gene;gene=rob;gene_biotype=protein_coding;gene_synonym=cbpB,ECK4388,JW4359,robA;locus_tag=b4396 NC_000913.3 RefSeq CDS 4634441 4635310 . - 0 ID=cds4311;Parent=gene4490;Dbxref=ASAP:ABE-0014420,UniProtKB/Swiss-Prot:P0ACI0,Genbank:NP_418813.1,EcoGene:EG11366,GeneID:948916;Name=NP_418813.1;Note=right origin-binding protein;gbkey=CDS;gene=rob;product=right oriC-binding transcriptional activator%2C AraC family;protein_id=NP_418813.1;transl_table=11 NC_000913.3 RefSeq gene 4635521 4635994 . + . ID=gene4491;Dbxref=EcoGene:EG11217,GeneID:948920;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;gene_synonym=ECK4389,JW4360,yjjD;locus_tag=b4397 NC_000913.3 RefSeq CDS 4635521 4635994 . + 0 ID=cds4312;Parent=gene4491;Dbxref=ASAP:ABE-0014426,UniProtKB/Swiss-Prot:P0AE91,Genbank:NP_418814.1,EcoGene:EG11217,GeneID:948920;Name=NP_418814.1;gbkey=CDS;gene=creA;product=putative periplasmic protein;protein_id=NP_418814.1;transl_table=11 NC_000913.3 RefSeq gene 4636007 4636696 . + . ID=gene4492;Dbxref=EcoGene:EG11218,GeneID:948922;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;gene_synonym=ECK4390,JW4361,ORF2,yjjE;locus_tag=b4398 NC_000913.3 RefSeq CDS 4636007 4636696 . + 0 ID=cds4313;Parent=gene4492;Dbxref=ASAP:ABE-0014428,UniProtKB/Swiss-Prot:P08368,Genbank:NP_418815.1,EcoGene:EG11218,GeneID:948922;Name=NP_418815.1;Note=catabolic regulation response regulator;gbkey=CDS;gene=creB;product=response regulator in two-component regulatory system with CreC;protein_id=NP_418815.1;transl_table=11 NC_000913.3 RefSeq gene 4636696 4638120 . + . ID=gene4493;Dbxref=EcoGene:EG10730,GeneID:948609;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;gene_synonym=ECK4391,JW4362,phoM;locus_tag=b4399 NC_000913.3 RefSeq CDS 4636696 4638120 . + 0 ID=cds4314;Parent=gene4493;Dbxref=ASAP:ABE-0014430,UniProtKB/Swiss-Prot:P08401,Genbank:NP_418816.1,EcoGene:EG10730,GeneID:948609;Name=NP_418816.1;Note=catabolite repression sensor kinase for PhoB%3B alternative sensor for pho regulon;gbkey=CDS;gene=creC;product=sensory histidine kinase in two-component regulatory system with CreB or PhoB;protein_id=NP_418816.1;transl_table=11 NC_000913.3 RefSeq gene 4638178 4639530 . + . ID=gene4494;Dbxref=EcoGene:EG10145,GeneID:948868;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;gene_synonym=cet,ECK4392,JW4363,refII;locus_tag=b4400 NC_000913.3 RefSeq CDS 4638178 4639530 . + 0 ID=cds4315;Parent=gene4494;Dbxref=ASAP:ABE-0014432,UniProtKB/Swiss-Prot:P08369,Genbank:NP_418817.1,EcoGene:EG10145,GeneID:948868;Name=NP_418817.1;Note=tolerance to colicin E2;gbkey=CDS;gene=creD;product=inner membrane protein;protein_id=NP_418817.1;transl_table=11 NC_000913.3 RefSeq gene 4639590 4640306 . - . ID=gene4495;Dbxref=EcoGene:EG10061,GeneID:948874;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;gene_synonym=cpxC,dye,ECK4393,fexA,JW4364,msp,seg,sfrA;locus_tag=b4401 NC_000913.3 RefSeq CDS 4639590 4640306 . - 0 ID=cds4316;Parent=gene4495;Dbxref=ASAP:ABE-0014434,UniProtKB/Swiss-Prot:P0A9Q1,Genbank:NP_418818.1,EcoGene:EG10061,GeneID:948874;Name=NP_418818.1;Note=negative response regulator of genes in aerobic pathways%2C (sensors%2C ArcB and CpxA);gbkey=CDS;gene=arcA;product=response regulator in two-component regulatory system with ArcB or CpxA;protein_id=NP_418818.1;transl_table=11 NC_000913.3 RefSeq gene 4640402 4640542 . + . ID=gene4496;Dbxref=EcoGene:EG12601,GeneID:948925;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;gene_synonym=ECK4394,JW4365;locus_tag=b4402 NC_000913.3 RefSeq CDS 4640402 4640542 . + 0 ID=cds4317;Parent=gene4496;Dbxref=ASAP:ABE-0014437,UniProtKB/Swiss-Prot:P0ADD9,Genbank:NP_418819.1,EcoGene:EG12601,GeneID:948925;Name=NP_418819.1;gbkey=CDS;gene=yjjY;product=uncharacterized protein;protein_id=NP_418819.1;transl_table=11 NC_000913.3 RefSeq gene 4640942 4641628 . + . ID=gene4497;Dbxref=EcoGene:EG12309,GeneID:948924;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;gene_synonym=ECK4395,JW4366,lasT;locus_tag=b4403 NC_000913.3 RefSeq CDS 4640942 4641628 . + 0 ID=cds4318;Parent=gene4497;Dbxref=ASAP:ABE-0014442,UniProtKB/Swiss-Prot:P37005,Genbank:NP_418820.1,EcoGene:EG12309,GeneID:948924;Name=NP_418820.1;gbkey=CDS;gene=yjtD;product=putative methyltransferase;protein_id=NP_418820.1;transl_table=11 ###