INFO @ Mon, 30 Apr 2012 09:02:14:
# ARGUMENTS LIST:
# name = MACS_in_Galaxy
# ChIP-seq file = /proj/galaxy/000/dataset_552.dat
# control file = None
# effective genome size = 2.70e+09
# tag size = 36
# band width = 300
# model fold = 32
# pvalue cutoff = 1.00e-05
# Ranges for calculating regional lambda are : 1000,5000,10000
INFO @ Mon, 30 Apr 2012 09:02:14: #1 read tag files...
INFO @ Mon, 30 Apr 2012 09:02:14: #1 read treatment tags...
Traceback (most recent call last):
File "/nas02/apps/python-2.6.5/bin/macs", line 238, in <module>
main()
File "/nas02/apps/python-2.6.5/bin/macs", line 53, in main
(treat, control) = _load_tag_files_options (options)
File "/nas02/apps/python-2.6.5/bin/macs", line 211, in _load_tag_files_options
treat = load_tag_file(options.tfile,options.format)
File "/nas02/apps/python-2.6.5/bin/macs", line 231, in load_tag_file
raise Exception("Format \"%s\" cannot be recognized!" % (format))
Exception: Format "SAM" cannot be recognized!