30 Sep
2010
30 Sep
'10
4:31 a.m.
Hi all, I'm wondering if there is any mechanism in the XML file format for tool wrappers to access global settings? e.g. something like $environment.temp to access the temp environment variable, or something like this for values in universe_wsgi.ini http://bitbucket.org/galaxy/galaxy-central/wiki/ToolConfigSyntax In particular, I'd like to know if there is a way to know how many threads a wrapped tool can use - is there a policy here? Looking at the existing megablast wrapper, this is hard coded as 8 in the Python script, tools/metag_tools/megablast_wrapper.py For the BLAST+ wrappers I am writting, I want to set the number of threads in the XML file - again currently hard coded as 8. Peter