Hello, thanks a lot for your answers, and the last one :), is there any plan to keep on working with this feature? Regards On 6 February 2015 at 11:39, Peter Cock <p.j.a.cock@googlemail.com> wrote:
Hello,
Postgres did it perfectly, but as I would like to enable this option in my production servers I changed two configs in galaxy.ini:
# This enables splitting of jobs into tasks, if specified by the
On Fri, Feb 6, 2015 at 9:59 AM, Roberto Alonso CIPF <ralonso@cipf.es> wrote: particular
tool config. # This is a new feature and not recommended for production servers yet. use_tasked_jobs = True local_task_queue_workers = 4
So I have two questions, 1. Why is this not appropriate for productions server yet?
At a practical level, I believe this setting is not used on the main usegalaxy.org instance, and thus has not been stress tested by the Galaxy developers.
Also (see below), it has little documentation.
2. What is local_task_queue_workers doing?
I'm not entiruely sure, but I think it is how many task-splitters would be run at once (e.g. several splittable jobs are submitted together). We use local_task_queue_workers = 4 but I forget why exactly.
I think I misunderstand something because I put this parameter in the tool config file: <parallelism method="basic" split_size="20" split_mode="number_of_parts"></parallelism> on ther other hand, I don't see any documentation about parallelism tag, is there any?
I don't think there is anything explicit on the wiki about how to use the parallelism tag :(
Peter
-- Roberto Alonso Functional Genomics Unit Bioinformatics and Genomics Department Prince Felipe Research Center (CIPF) C./Eduardo Primo Yúfera (Científic), nº 3 (junto Oceanografico) 46012 Valencia, Spain Tel: +34 963289680 Ext. 1021 Fax: +34 963289574 E-Mail: ralonso@cipf.es