Good Morning,

 

I have had the following issue reported to me by one of our users and I have confirmed the behaviour.

 

Hi Mike,

I'm looking at the new Galaxy at http://jic55666:8080/root and I have found a problem.

If I import a dataset from the data libraries, then stuff runs OK.

If I upload a dataset from a file I get the following problems.

1. I can view data preview in history item, but can't view data in main panel (by clicking on the eye) 2. Tools run on file-uploaded data execute OK and appear to produce output (again viewable in history item), but data can't be viewed in main panel.

3. Downloading any datasets created from file-uploaded dataset, result in an empty file.

4. If I upload a file to Galaxy and then save it back to disk, it's empty.

 

Some further specifics on our install

 

galaxy@jic55666:~/software/galaxy-central$ hg tip

changeset:   6042:2469c53051ea

tag:         tip

user:        Daniel Blankenberg <dan@bx.psu.edu>

date:        Sun Sep 25 13:27:14 2011 -0400

summary:     Some random lines tool tweaks.

 

Thanks

 

Michael.

 

Please note, that my email address is no longer givenname.surname@bbsrc.ac.uk. Please update your records to reflect my new email address of givenname.surname@nbi.ac.uk as shown on this email.