Le 11 oct. 2017 à 16:41, Matthias Bernt <m.bernt@ufz.de> a écrit :

Dear list,

our galaxy runs jobs as real user and I get the following error for multiple tools:

"""
Failed to activate conda environment! Error was: CondaEnvironmentError: Environment error: Cannot activate environment bash. User does not have write access for conda symlinks. Fatal error: Exit code 1 ()
"""

Does anyone have an idea where I could start digging? My workaround (run the tool once as galaxy user) is to time consuming since I have to restart galaxy 2x.

Thanks a lot.

Cheers,
Matthias

P.S.: https://github.com/galaxyproject/galaxy/issues/4767



--

-------------------------------------------
Matthias Bernt
Bioinformatics Service
Molekulare Systembiologie (MOLSYB)
Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/
Helmholtz Centre for Environmental Research GmbH - UFZ
Permoserstraße 15, 04318 Leipzig, Germany
Phone +49 341 235 482296,
m.bernt@ufz.de, www.ufz.de

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Administrative Geschäftsführerin/ Administrative Managing Director:
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