Our upload issues seem to have been resolved. Thanks for checking. I added the attached comment to another list-serve message - we did have the referenced error in our startup logs. The attached email mentions I was still having trouble uploading files with the Upload File tool. That is now resolved as well. Steve -----Original Message----- From: Dannon Baker [mailto:dannonbaker@me.com] Sent: Sunday, February 03, 2013 7:14 PM To: Hakeem Almabrazi Cc: Stephen Groenewold; Galaxy Dev; galaxy-bugs@bx.psu.edu Bugs Subject: Re: [galaxy-dev] File Upload doesn't generate any activity I just wanted to follow up on this and make sure everything was now working as expected. I've tried to reproduce the original issue and have thus far been unsuccessful in doing so with a fresh instance. Is the configuration of your Galaxy instance special in any way? Did you notice any logged errors (either in the Javascript console or in Galaxy's log)? -Dannon On Feb 1, 2013, at 3:37 PM, Hakeem Almabrazi <halmabrazi@idtdna.com> wrote:
Stephen,,,
Here is your solution:
In the Tools panel select "Get Data", "Upload File". You can either upload a file, or enter one or more URLs in the "URL/Text" box. Enter "http://galaxy.psu.edu/CPMB/TAF1_ChIP.txt" in the box and click "Execute"
I am not sure what happened there but it seems this triggered some database updates that was needed.
It worked J....
From: galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu] On Behalf Of Stephen Groenewold Sent: Friday, February 01, 2013 10:41 AM To: galaxy-dev@lists.bx.psu.edu Subject: [galaxy-dev] File Upload doesn't generate any activity
We've installed a local instance of Galaxy and are having trouble with the first step of uploading files. The only thing that will currently upload is text pasted into the URL/Text box.
Any attempt to upload a file using the Browse File box not only fails, it never even starts. It's as if the Execute button is disabled.
I've tried changing the ajax-upload parameter to "false" in tools/data_source/upload.xml (as mentioned in a workaround posted to the list by Daniel Blankenburg in Aug 2012). I've also tried using different browsers (including Internet Explorer) and going the route of Adding Data Libraries as Admin. None of those attempts have worked.
Am I missing a configuration setup? Could there be permissions issues on the Galaxy machine?
Thanks.
Steve
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: