Hi Dhivya,

Sorry for the delay in response. This is caused by not having the bwa binaries and installed on the path in a location accessible to the user under which Galaxy is running. Please let us know if we can provide additional details.

Thanks for using Galaxy,

Dan


On Aug 22, 2011, at 5:32 PM, dhivya arasappan wrote:

Hi all,

I'm seeing the following error when I try to use the galaxy BWA wrapper for SOLID data :


An error occurred running this job:Could not determine BWA version
The alignment failed.
Error aligning sequence. /bin/sh: bwa: not found


Any suggestions in figuring out what this error has to do with would be appreciated. 

thanks
Dhivya

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