Hi Peter, On Nov 28, 2013, at 12:56 PM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
On Thu, Nov 28, 2013 at 5:30 PM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
Thank you - that alerted me to a missing set of out output files for a recently added test, hopefully addressed in this revision: http://testtoolshed.g2.bx.psu.edu/view/peterjc/ncbi_blast_plus/1b8a92016045
But its not all good news - another test is now listed as failing, but with missing test results: http://testtoolshed.g2.bx.psu.edu/view/peterjc/get_orfs_or_cdss/09b5b1af9b8f
Another little oddity, the three test results for mira_bait.xml are missing (although it correctly tells me mira_4_0_mapping and mira_4_0_de_novo have no tests):
http://testtoolshed.g2.bx.psu.edu/view/peterjc/mira4_assembler/302d13490b23
Here is what I am seeing for the missing tests. Is this information ot correct? If not, what is incorrect? Automated tool test results Test runs 2013-11-28 13:02:42 Automated test environment Time tested: 2013-11-28 13:02:42 System: Architecture: Python version: Galaxy revision: Galaxy database version: Tool shed revision: 11549:5aede225ebef Tool shed database version: 21 Tool shed mercurial version: 2.2.3 Tools missing tests or test data Tool id: mira_4_0_mapping Tool version: 0.0.2 Tool guid: testtoolshed.g2.bx.psu.edu/repos/peterjc/mira4_assembler/mira_4_0_mapping/0.0.2 Missing components: Functional test definitions missing for mira_4_0_mapping. Tool id: mira_4_0_de_novo Tool version: 0.0.2 Tool guid: testtoolshed.g2.bx.psu.edu/repos/peterjc/mira4_assembler/mira_4_0_de_novo/0.0.2 Missing components: Functional test definitions missing for mira_4_0_de_novo. 2013-11-28 11:29:49 Automated test environment Time tested: 2013-11-28 11:29:49 System: Architecture: Python version: Galaxy revision: Galaxy database version: Tool shed revision: 11549:5aede225ebef Tool shed database version: 21 Tool shed mercurial version: 2.2.3 Tools missing tests or test data Tool id: mira_4_0_mapping Tool version: 0.0.2 Tool guid: testtoolshed.g2.bx.psu.edu/repos/peterjc/mira4_assembler/mira_4_0_mapping/0.0.2 Missing components: Functional test definitions missing for mira_4_0_mapping. Tool id: mira_4_0_de_novo Tool version: 0.0.2 Tool guid: testtoolshed.g2.bx.psu.edu/repos/peterjc/mira4_assembler/mira_4_0_de_novo/0.0.2 Missing components: Functional test definitions missing for mira_4_0_de_novo.
Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
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