On Mon, Sep 17, 2012 at 2:44 PM, Makis Ladoukakis <makis4ever@hotmail.com> wrote:
Dear Peter,
Thank you for your help. I have used the blastp.loc file and renamed it and altered it in order to keep the same format as in the previous tool. Also I used the same ordering from blastp tool (i.e. 0=value 1=name 2=path). Nevertheless when I run my tool I get the error:
Error: Failed to open txt file test_17_Sep_2012 for reading.
I have used chmod 777 for my file but the issue still persists. Can you help me please? What could be the problem.
Thank you in advance, Makis Ladoukakis
It would probably help to see your tool's XML file. Are you using a public source code repository during development? If you are manually installing the tool (which is how I work when developing a new tool), the *.loc files need to go in the folder galaxy/tool-data - but this is probably a bit different via a ToolShed installation. Also note that (currently) you must restart Galaxy in order for any changes to the *.loc files to take effect: https://bitbucket.org/galaxy/galaxy-central/issue/538/ Peter