ThanksAny idea on how to generate this matrix file??Hi All,Thanks for the suggestions. I installed the Toolshed ( Differential_Count (version 0.21) ). It asks for the input matrix - rows are contigs, columns are counts for each sample.On Tue, Aug 20, 2013 at 12:53 PM, Mahtab Mirmomeni <m.mirmomeni@student.unimelb.edu.au> wrote:Hi Sridhar,I'm using differential_count_model repository by fubar in the test toolshed which has both EdgeR and Deseq2 and it's working for me.ThanksMahtabOn Tue, Aug 20, 2013 at 5:03 PM, Bjoern Gruening <bjoern.gruening@gmail.com> wrote:
Hi Sridhar,
we are developing a DESeq2 tool at the moment, if you want to join get
in touch with me. Its developed here:
https://github.com/bgruening/galaxytools/tree/master/deseq2
I will upload our latest progress during the day.
Cheers,
Bjoern
> ___________________________________________________________
> Dear users,
>
>
> Could anybody suggest the valid DESeq toolshed for RNA sequencing???
>
>
> Thanks
> Sridhar
>
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