Hi all,

We are trying to get our instance of Galaxy submitting jobs to a cluster a using the staged method referred to at http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster.  Our cluster is running Torque 4.1.3.  We need to use Torque 4.x clients to be able to submit jobs to it.  I’ve set up our Galaxy server to be able to submit jobs and stage data in and out.  Galaxy can’t submit jobs to the cluster, however.  The problem seems to be with pbs_python.  On the associated wiki there is a ticket for the problem and I have been able to reproduce it.  https://oss.trac.sara.nl/pbs_python/ticket/31

Has anyone had any experience with getting pbs_python to work with Torque 4.x?

Regards.

Steve McMahon

Solutions architect & senior systems administrator

ASC Cluster Services

Information Management & Technology (IM&T)

CSIRO

Phone: +61-2-62142968  |  Mobile:  +61-4-00779318

steve.mcmahon@csiro.au |  www.csiro.au

PO Box 225, DICKSON  ACT  2602

1 Wilf Crane Crescent, Yarralumla  ACT  2600