details: http://www.bx.psu.edu/hg/galaxy/rev/c5968ee9399b changeset: 2579:c5968ee9399b user: Kanwei Li <kanwei@gmail.com> date: Wed Aug 19 11:33:58 2009 -0400 description: Typo 1 file(s) affected in this change: tools/new_operations/cluster.xml diffs (12 lines): diff -r e9d70dca2ff5 -r c5968ee9399b tools/new_operations/cluster.xml --- a/tools/new_operations/cluster.xml Wed Aug 19 11:33:48 2009 -0400 +++ b/tools/new_operations/cluster.xml Wed Aug 19 11:33:58 2009 -0400 @@ -74,7 +74,7 @@ **Syntax** - **Maximum distance** is greatest distance in base pairs allowed between intervals that will be considered "clustered". **Negative** values for distance are allowed, and are useful for clustering intervals that overlap. -- **Minimum intervals per cluster** allow a threshold to be set on the minimum number of intervals to be considered a cluster. Any area with less than this minimum will not be included in the ouput. +- **Minimum intervals per cluster** allow a threshold to be set on the minimum number of intervals to be considered a cluster. Any area with less than this minimum will not be included in the output. - **Merge clusters into single intervals** outputs intervals that span the entire cluster. - **Find cluster intervals; preserve comments and order** filters out non-cluster intervals while maintaining the original ordering and comments in the file. - **Find cluster intervals; output grouped by clusters** filters out non-cluster intervals, but outputs the cluster intervals so that they are grouped together. Comments and original ordering in the file are lost.