Re: [galaxy-dev] Problem running ncbi_makeblastdb as real user in cluster

On Wed, Mar 20, 2013 at 3:43 PM, Raj Ayyampalayam <raj76@uga.edu> wrote:

Hi Guys,

Thanks for the quick response. I installed the latest blast datatypes from the toolshed and that fixed the issue.

Great - thanks for letting us know so promptly.

Peter, can you also fix the $outfile.extra_files_path to $outfile.files_path on line 5 in the makedb wrapper xml file.

What do you mean 'fix' it? It should be using extra_files_path shouldn't it? This is a composite datatype in Galaxy. Peter