Hi Peter v H,

Which version of Galaxy are you running?

Which version of ncbi_blast_tools are you running? (ideally down to
the ToolShed revision)

My guess is that since this used to be .extra_files_path perhaps your
Galaxy is too old for .files_path to work?
https://github.com/peterjc/galaxy_blast/commit/2bbbf7f361ada20bf1b5bd777fae6e0cb52c4a38

Thanks,

Peter C.

On Tue, Jul 21, 2015 at 3:08 PM, Peter van Heusden <pvh@sanbi.ac.za> wrote:
> Hi there
>
> I'm trying to use the blastp tools from the ncbi_blast_tools, but every time
> I try and run a job I get the following error:
>
> Traceback (most recent call last):
>   File
> "/net/datasrv3hs.sanbi.ac.za/cip0/software/galaxy/galaxysrv/galaxy/lib/galaxy/jobs/runners/__init__.py",
> line 163, in prepare_job
>     job_wrapper.prepare()
>   File
> "/net/datasrv3hs.sanbi.ac.za/cip0/software/galaxy/galaxysrv/galaxy/lib/galaxy/jobs/__init__.py",
> line 859, in prepare
>     self.command_line, self.extra_filenames, self.environment_variables =
> tool_evaluator.build()
>   File
> "/net/datasrv3hs.sanbi.ac.za/cip0/software/galaxy/galaxysrv/galaxy/lib/galaxy/tools/evaluation.py",
> line 422, in build
>     raise e
> NotFound: cannot find 'files_path' while searching for
> 'db_opts.histdb.files_path'
>
> This is happening when expanding the tool template. The BLAST db in in the
> history (thus the reference to histdb) but why can it not find this
> attribute?
>
> Peter
>
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