Hi Christopher,
can you please submit an issue for this at https://github.com/galaxyproject/galaxy/issues/ with the relevant logs and/or tracebacks?

Cheers,
Nicola

On 03/12/2018 13:33, Previti wrote:
Dear all,

In my ongoing saga concerning our data libraries, I came across another issue after our update from 17.09 to 18.05.
When trying to import fastq.gz files into a data library (linking the files from a user directory), the format is not recognized automatically.

I specifically have to set the data type to fastq.gz in order for it to work at all and even then it sometimes ends up throwing an error (state = error).

Is there anything in particular I need to change to make this work reliably?

Cheers,

Christopher



--
Dr. Christopher Previti
Genomics and
Proteomics Core Facility
High Throughput Sequencing (W190)
Bioinformatician

German Cancer Research Center (DKFZ)
Foundation under Public Law
Im Neuenheimer Feld 580
69120 Heidelberg
Germany
Room: B2.102 (INF580/TP3)
Phone: +49 6221 42-4661

christopher.previti@dkfz.de
www.dkfz.de

Management Board: Prof. Dr. Michael Baumann, Prof. Dr. Josef Puchta
VAT-ID No.: DE143293537

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