17 Oct
2013
17 Oct
'13
5:23 a.m.
On Thu, Oct 17, 2013 at 10:53 AM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
Hi John,
Is all your semi-colon fixing on the trunk? I've found another bug in this area (patch below), which is showing up with task splitting under SGE.
...
Note the repeated semi-colon, which causes the child jobs to fail (patch below).
There is however a second bug, the merge fails yet the history entry is still green (success). The merge method is raising a ValueError yet it is being ignored.
That bug detecting failiures be a symptom of something more general, I've just had a split-BLAST job return this as stderr, yet the history entry is green: Job output not returned from cluster Peter