On Feb 26, 2013, at 8:23 AM, Quang Trinh wrote:
Hi Greg, Works. Thanks.
Is it possible to create a branch call 'latest_stable', which always points to the latest stable release so then on our end, we can always do 'hg update latest_stable' in one of our scripts to update rather using 'release_2013.02.08'?
Hi Quang, Once your repository is on the stable branch (you can check using `hg branch`, then `hg pull` followed by `hg update` will always get you the latest stable changes. This may include some changes committed after the release, however. --nate
Thanks,
On Mon, Feb 25, 2013 at 8:52 AM, Greg Von Kuster <greg@bx.psu.edu> wrote:
Hello Quang,
It looks like you are attempting to install from the main Galaxy tool shed into a Galaxy instance that is older than the December 20, 2012 Galaxy release. You have to be using that release or newer (up to the current stable branch) to use the main Galaxy tool shed.
To get the latest stable branch, you can do this:
hg update release_2013.02.08
Then to get all updates to the stable branch, you can:
hg pull -b stable https://bitbucket.org/galaxy/galaxy-central
followed by:
hg update
Greg Von Kuster
On Feb 25, 2013, at 8:35 AM, Quang Trinh wrote:
Hi dev, I am trying to install bwa from toolshed on my Galaxy instance on Amazon just now and get this error ( please see below). Installing bwa worked for me before.
URL: http://xxx.xxx.xxx.xxx/admin_toolshed/prepare_for_install?tool_shed_url=http://toolshed.g2.bx.psu.edu/&repository_ids=25bdd3c7f0d57b06&changeset_revisions=ffa8aaa14f7c Module paste.exceptions.errormiddleware:143 in __call__
app_iter = self.application(environ, start_response)
Module paste.debug.prints:98 in __call__
environ, self.app)
Module paste.wsgilib:539 in intercept_output
app_iter = application(environ, replacement_start_response)
Module paste.recursive:80 in __call__
return self.application(environ, start_response)
Module paste.httpexceptions:632 in __call__
return self.application(environ, start_response)
Module galaxy.web.framework.base:160 in __call__
body = method( trans, **kwargs )
Module galaxy.web.framework:206 in decorator
return func( self, trans, *args, **kwargs )
Module galaxy.webapps.galaxy.controllers.admin_toolshed:1199 in prepare_for_install
description, repository_clone_url, changeset_revision, ctx_rev, repository_owner, tool_dependencies = repo_info_tuple
ValueError: too many values to unpack
Thanks,
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