Whyte, Jeffrey wrote:
Hi,
I've been having trouble running a local instance of Galaxy on a Mac Pro after upgrading to OS X 10.7 (Lion). My Python version is 2.7.1 and Mercurial is 1.9.1 for MacOS X 10.7. I don't have any MacPorts installed.
The error I see after running the startup script is pasted at the end of this message. Thanks in advance for any help or advice. jjw
Hi Jeffrey, We haven't yet gotten our dependencies up to speed on Lion. Could you grab a copy of Python from python.org and use this? It'll install under /Library/Frameworks/Python.framework, just add the correct bin/ directory to the front of your $PATH and start Galaxy as normal. Sorry for the inconvenience, --nate
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[~/galaxy-dist] myuserid 10:11 AM > ./run.sh Some eggs are out of date, attempting to fetch... Warning: MarkupSafe (a dependent egg of Mako) cannot be fetched Warning: decorator (a dependent egg of sqlalchemy-migrate) cannot be fetched Warning: simplejson (a dependent egg of WebHelpers) cannot be fetched Traceback (most recent call last): File "./scripts/fetch_eggs.py", line 30, in <module> c.resolve() # Only fetch eggs required by the config File "/Users/myuserid/galaxy-dist/lib/galaxy/eggs/__init__.py", line 345, in resolve egg.resolve() File "/Users/myuserid/galaxy-dist/lib/galaxy/eggs/__init__.py", line 195, in resolve return self.version_conflict( e.args[0], e.args[1] ) File "/Users/myuserid/galaxy-dist/lib/galaxy/eggs/__init__.py", line 226, in version_conflict r = pkg_resources.working_set.resolve( ( dist.as_requirement(), ), env, egg.fetch ) File "/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/pkg_resources.py", line 565, in resolve raise DistributionNotFound(req) # XXX put more info here pkg_resources.DistributionNotFound: numpy==1.6.0 Fetch failed. [~/galaxy-dist] myuserid 10:12 AM >
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