Hello Bjoern, What version of Galaxy are you using? Your code base should be tracking the galaxy-central repository on bitbucket in order to use the tool shed with your local Galaxy instance. The galaxy-central repo is currently around 7201:62bdb265d300, and you can see the version you are running by typing the following in your Galaxy installation directory. %hg heads I believe this behavior will be resolved if you update to the latest code, but let me know if you continue to bump into problems. Thanks, Greg Von Kuster On May 26, 2012, at 10:51 AM, Björn Grüning wrote:
Hi,
has anyone encountered that problem or has an idea how to solve it?
Traceback (most recent call last): File "/home/ctb/galaxy-dist/lib/galaxy/web/buildapp.py", line 82, in app_factory app = UniverseApplication( global_conf = global_conf, **kwargs ) File "/home/ctb/galaxy-dist/lib/galaxy/app.py", line 64, in __init__ self.installed_repository_manager.load_proprietary_datatypes() File "/home/ctb/galaxy-dist/lib/galaxy/tool_shed/__init__.py", line 26, in load_proprietary_datatypes load_datatype_items( self.app, tool_shed_repository, relative_install_dir ) File "/home/ctb/galaxy-dist/lib/galaxy/util/shed_util.py", line 1036, in load_datatype_items app.datatypes_registry.load_datatype_converters( app.toolbox, installed_repository_dict=repository_dict, deactivate=deactivate ) AttributeError: 'UniverseApplication' object has no attribute 'toolbox'
All files are in one repository ... xml, the python-class und the converters. I was able to successfully upload it to our test-toolshed but after installing it (also successfully) galaxy is not able to start. Also the converters are recognised as tools in the toolshed is that intended?
Thanks! Bjoern
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