Hi,

You can use label="$input.name"

Cheers,
Joachim

Joachim Jacob, PhD

Rijvisschestraat 120, 9052 Zwijnaarde
Tel: +32 9 244.66.34
Bioinformatics Training and Services (BITS)
http://www.bits.vib.be
@bitsatvib

On 10/26/2012 04:38 PM, Darin wrote:
> Hello,
>
> I'm new to Galaxy, and I've been asked to tweak some tools so that
> output file names are related to input file names. For example, an
> input file of myData.abc might lead to an output file named
> myData_afterMyTool.xyz.
>
> I think the user is really just interested in the labels showing up in
> the history panel, so that gives me some flexibility.
>
> In my development environment, I've changed one tool's xml file's
> output tag to this:
>
> <outputs>
> <data name="out_file1" format="bed" label="${input1}_afterTool.xyz"/>
> </outputs>
>
> ... and that seems to work, but it's using an internal file name,
> instead of the label for the input file.
>
> So - does anyone know if there's an easy way to get the label from the
> input file into the output label, instead of the path/dataset_n.dat
> file format for this name? If there's a better way to approach this,
> I'd love any suggestions on that, too.
>
> Thanks,
>
> Darin
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