My fault. I did not set a title for it. (Anyway this should be caught I think.) regards, Andreas On 25.10.2012 13:18, Andreas Kuntzagk wrote:
Hi,
on our local Galaxy instance I try to setup Visualization. I followed http://wiki.g2.bx.psu.edu/Learn/Visualization#Setup_for_Local_Instances
But when I try to create a new visalization I get an error with this traceback:
URL: http://bbc.mdc-berlin.de/galaxy/visualization/create File '/data/galaxy/galaxy-dist/eggs/WebError-0.8a-py2.6.egg/weberror/evalexception/middleware.py', line 364 in respond app_iter = self.application(environ, detect_start_response) File '/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/debug/prints.py', line 98 in __call__ environ, self.app) File '/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/wsgilib.py', line 539 in intercept_output app_iter = application(environ, replacement_start_response) File '/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/recursive.py', line 80 in __call__ return self.application(environ, start_response) File '/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/httpexceptions.py', line 632 in __call__ return self.application(environ, start_response) File '/data/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 160 in __call__ body = method( trans, **kwargs ) File '/data/galaxy/galaxy-dist/lib/galaxy/web/framework/__init__.py', line 93 in decorator return func( self, trans, *args, **kwargs ) File '/data/galaxy/galaxy-dist/lib/galaxy/webapps/galaxy/controllers/visualization.py', line 590 in create type=visualization_type ) File '/data/galaxy/galaxy-dist/lib/galaxy/web/base/controller.py', line 343 in create_visualization revision = trans.model.VisualizationRevision( visualization=visualization, title=title, config=config, dbkey=dbkey ) File '<string>', line 4 in __init__ File '/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/state.py', line 82 in initialize_instance return manager.events.original_init(*mixed[1:], **kwargs) File '/data/galaxy/galaxy-dist/lib/galaxy/model/__init__.py', line 2764 in __init__ self.visualization = visualization File '/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py', line 150 in __set__ self.impl.set(instance_state(instance), instance_dict(instance), value, None) File '/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py', line 590 in set value = self.fire_replace_event(state, dict_, value, old, initiator) File '/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py', line 610 in fire_replace_event value = ext.set(state, value, previous, initiator or self) File '/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py', line 847 in set new_state, new_dict = instance_state(child), instance_dict(child) AttributeError: 'dict' object has no attribute '_sa_instance_state'
Any idea what may be wrong?
regards, Andreas
-- Andreas Kuntzagk SystemAdministrator Berlin Institute for Medical Systems Biology at the Max-Delbrueck-Center for Molecular Medicine Robert-Roessle-Str. 10, 13125 Berlin, Germany http://www.mdc-berlin.de/en/bimsb/BIMSB_groups/Dieterich