On 10/19/2016 03:23 PM, Martin Čech wrote:
> Hi Pierre,
>
> how old is your Tool Shed? When was the last time a tool installation
> from it succeeded?
>

Hi martin,

here is the log from the toolshed :

    commit 73f46f4e08141f78927056fa3e4709d0ab323972
    Merge: 05e6682 27dc31a
    Author: Nicola Soranzo
    Date:   Wed Nov 18 10:06:53 2015 +0000


I was able to install my tool from this toolshed a few minutes ago.
The second attempt failed.

Thanks for the helps,

Pierre


> thanks
>
> M.
>
> On Wed, Oct 19, 2016 at 9:20 AM Pierre Lindenbaum
> <pierre.lindenbaum@univ-nantes.fr
> <mailto:pierre.lindenbaum@univ-nantes.fr>> wrote:
>
>     Hi all, I got a "Internal Server Error" ==> "KeyError:
>     'tool_panel_section' " when I'm trying to install a new tool from our
>     toolshed (see stacktrace below).
>
>     My galaxy instance was cloned from
>
>
>             commit 217854827ac7dfc88c5388cd2ecb24fffd86c060
>             Merge: 056a7e0 ad0d0bc
>             Author: Björn Grüning <bjoern@gruenings.eu
>     <mailto:bjoern@gruenings.eu>>
>             Date:   Mon Oct 10 10:23:37 2016 +0200
>
>     with only a few minor(?) (admin...) modifications under config/*
>     This error was raised when I've removed + re-installed a tool from the
>     toolshed.
>
>     How can I fix this ?
>
>     Thanks
>
>     Pierre
>
>
>     127.0.0.1 - - [19/Oct/2016:15:15:44 +0200] "POST
>     /admin_toolshed/prepare_for_install HTTP/1.1" 500 -
>     "http://127.0.0.1:8080/admin_toolshed/prepare_for_install?changeset_revisions=a38c6719c9c3&repository_ids=9b8af19fb3feae8b&tool_shed_url=http%3A%2F%2Fmasked.host.fr%2Ftoolshed%2F"
>     "Mozilla/5.0 (X11; Ubuntu; Linux i686; rv:49.0) Gecko/20100101
>     Firefox/49.0"
>     Error - <type 'exceptions.KeyError'>: 'tool_panel_section'
>     URL: http://127.0.0.1:8080/admin_toolshed/prepare_for_install
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/galaxy/web/framework/middleware/error.py',
>     line 151 in __call__
>        app_iter = self.application(environ, sr_checker)
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/.venv/local/lib/python2.7/site-packages/paste/recursive.py',
>     line 85 in __call__
>        return self.application(environ, start_response)
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/.venv/local/lib/python2.7/site-packages/paste/httpexceptions.py',
>     line 640 in __call__
>        return self.application(environ, start_response)
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/galaxy/web/framework/base.py',
>     line 135 in __call__
>        return self.handle_request( environ, start_response )
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/galaxy/web/framework/base.py',
>     line 194 in handle_request
>        body = method( trans, **kwargs )
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/galaxy/web/framework/decorators.py',
>     line 98 in decorator
>        return func( self, trans, *args, **kwargs )
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py',
>     line 1080 in prepare_for_install
>        install_repository_manager.handle_tool_shed_repositories(
>     installation_dict )
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/tool_shed/galaxy_install/install_manager.py',
>     line 633 in handle_tool_shed_repositories
>        new_tool_panel_section_label=new_tool_panel_section_label )
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/tool_shed/galaxy_install/repository_dependencies/repository_dependency_manager.py',
>     line 198 in create_repository_dependency_objects
>      self.app.installed_repository_manager.activate_repository(
>     repository_db_record )
>     File
>     '/home/lindenb/tmp/GALAXY/galaxy.gitlab/lib/tool_shed/galaxy_install/installed_repository_manager.py',
>     line 94 in activate_repository
>        tool_panel_dict = repository.metadata[ 'tool_panel_section' ]
>     KeyError: 'tool_panel_section'
>