Hi all - I have a tool which is essentially an entire NGS pipeline bundled into a perl script and associated modules.  I'd like to offer this tool to users via Galaxy. 

I'm trying to pass a bunch of fastq files to the tool, but noticed that operating on multiple datasets creates a separate job for each dataset.  I want to pass all the datasets to the tool so only one galaxy job is actually created.  Is this possible, and if so, how do I go about doing this?

Ryan