I have created a Trello card to track this request here https://trello.com/c/qCtBBB8n. Any chance you can share the tool with me? I understand that this instinct is too simplistic - but it seems to me like the option to repeatedly run a tool over many datasets should not be the concern of the tool author - it is a user concern. If we add the option - perhaps we could stipulate that it requests some other parameter to dependent on it (I assume you have a dependent parameter in the repeat?). -John On Thu, Jan 22, 2015 at 5:50 AM, Vimalkumar Velayudhan <vimal@biotechcoder.com> wrote:
Thanks Peter. I see how this feature would be useful, but the program I'm writing a wrapper for has an argument with values corresponding to the input files. I am using a <repeat> tag to maintain this order. With the multi-run option, files are selected in a random manner and added to the job queue. It is best not to display the multi-run option in this case.
I see there is a TODO on this already: https://bitbucket.org/galaxy/galaxy-dist/src/a2308bdc93b897af974766b190abe01...
For now, I have set allow=False but I believe this is best set at the param tag level:
<param type="data" multirun="false" />
Vimal
On Wed, Jan 21, 2015 at 2:26 AM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
I think this is the (relatively new) Galaxy ability to automatically run N copies of your tool given N input files, making N outputs and is related to the collections work.
(This is possible if your tool takes a single input file)
Peter
On Tue, Jan 20, 2015 at 6:17 PM, Vimalkumar Velayudhan <vimal@biotechcoder.com> wrote:
Hi all,
I am trying to create a select box with the possibility of selecting only a single item from the input dataset (figure 1). This works fine but the option for selecting multiple files is still visible (figure 2). The multiple="false" attribute has no effect.
Figure: http://i.imgur.com/oJVFCoF.png
I have the following in my XML.
<param format="tabular" name="ribo_files" type="data" label="Select Ribo-Seq alignment file" multiple="false" > </param>
Any suggestions?
galaxy-dist revision 5f4c13d622b8
Regards, Vimalkumar Velayudhan
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