Hi Jayant, <br><br><div class="gmail_quote"><blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
FYI the error still persists.<div><div></div><br>
</div></blockquote></div><br>Please find the modified tool configuration file, attached here. <br>Just redirected your tool output to the result file in the below line <br><br>&lt;command interpreter=&quot;perl&quot;&gt;<a href="http://allsnp_modified.pl">allsnp_modified.pl</a> $input &gt; $output&lt;/command&gt;<br>

<br>HTH, Vipin<br><br>