Hi guys, I was given the following error when upgrading the database from 109 to 110: 0109_add_repository_dependency_tables DEBUG 2013-03-01 15:14:15,554 Creating repository_repository_dependency_association table failed: (OperationalError) (1059, "Identifier name 'ix_repository_repository_dependency_association_tool_shed_repository_id' is too long") u'CREATE INDEX ix_repository_repository_dependency_association_tool_shed_repository_id ON repository_repository_dependency_association (tool_shed_repository_id)' () 0109_add_repository_dependency_tables DEBUG 2013-03-01 15:14:15,554 Creating repository_repository_dependency_association table failed: (OperationalError) (1059, "Identifier name 'ix_repository_repository_dependency_association_tool_shed_repository_id' is too long") u'CREATE INDEX ix_repository_repository_dependency_association_tool_shed_repository_id ON repository_repository_dependency_association (tool_shed_repository_id)' () So I guess the indexes weren't created. I am using MySQL, is it a big deal for Galaxy? Cheers, Derrick