Hi all

I am due to give galaxy training tomorrow and the Galaxy server has gone down.  Our galaxy admin is travelling and not responding and I appreciate a quick response to this issue.  

When I run galaxy_restart.sh I get the following error in web0.pid:

migrate.versioning.repository DEBUG 2015-10-28 23:07:47,285 Config: {'db_settings': {'__name__': 'db_settings', 'required_dbs': '[]', 'version_table': 'migrate_version', 'repository_id': 'Galaxy'}}

lib/galaxy/model/migrate

galaxy.model.migrate.check DEBUG 2015-10-28 23:07:47,296 psycopg2 egg successfully loaded for postgresql dialect

Traceback (most recent call last):

  File "/home/galaxy/galaxy-dist/lib/galaxy/webapps/galaxy/buildapp.py", line 35, in app_factory

    app = UniverseApplication( global_conf = global_conf, **kwargs )

  File "/home/galaxy/galaxy-dist/lib/galaxy/app.py", line 52, in __init__

    create_or_verify_database( db_url, kwargs.get( 'global_conf', {} ).get( '__file__', None ), self.config.database_engine_options, app=self )

  File "/home/galaxy/galaxy-dist/lib/galaxy/model/migrate/check.py", line 104, in create_or_verify_database

    % ( db_schema.version, migrate_repository.versions.latest, config_arg ) )

Exception: Your database has version '124' but this code expects version '115'.  Please backup your database and then migrate the schema by running 'sh manage_db.sh upgrade'.

------

I did then try to do sh manage_db.sh downgrade 115 but I got this error:

Traceback (most recent call last):

  File "./scripts/manage_db.py", line 62, in <module>

    main( repository=repo, url=db_url )

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/shell.py", line 207, in main

    ret = command_func(**kwargs)

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/api.py", line 202, in downgrade

    return _migrate(url, repository, version, upgrade=False, err=err, **opts)

  File "<string>", line 2, in _migrate

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/util/__init__.py", line 159, in with_engine

    return f(*a, **kw)

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/api.py", line 345, in _migrate

    changeset = schema.changeset(version)

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/schema.py", line 80, in changeset

    changeset = self.repository.changeset(database, start_ver, version)

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/repository.py", line 225, in changeset

    changes = [self.version(v).script(database, op) for v in versions]

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/repository.py", line 189, in version

    return self.versions.version(*p, **k)

  File "/home/galaxy/galaxy-dist/eggs/sqlalchemy_migrate-0.7.2-py2.6.egg/migrate/versioning/version.py", line 140, in version

    return self.versions[VerNum(vernum)]

KeyError: <VerNum(124)>

Any help asap will be greatly appreciated.

Ali

**************************************************************************
The information contained in the EMail and any attachments is confidential and intended solely and for the attention and use of the named addressee(s). It may not be disclosed to any other person without the express authority of Public Health England, or the intended recipient, or both. If you are not the intended recipient, you must not disclose, copy, distribute or retain this message or any part of it. This footnote also confirms that this EMail has been swept for computer viruses by Symantec.Cloud, but please re-sweep any attachments before opening or saving. http://www.gov.uk/PHE
**************************************************************************

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/